No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G26330 AT1G26330 |
| fragaria_vesca | FvH4_4g29660 FvH4_4g29660 FvH4_4g29660 FvH4_4g29660 FvH4_4g29660 FvH4_4g29660 FvH4_4g29660 FvH4_4g29660 FvH4_4g29660 FvH4_4g29660 FvH4_4g29660 FvH4_4g29660 FvH4_4g29660 FvH4_7g33791 |
| malus_domestica | MD16G1059100.v1.1 |
| prunus_persica | Prupe.1G290000_v2.0.a1 |
| pyrus_communis | pycom16g05150 |
| rosa_chinensis | RchiOBHm_Chr4g0437911 |
| rosa_laevigata | RLG00000006401 |
| rosa_multiflora | Rmu_sc0008907.1_g000008 |
| rosa_roxburghii | Rroxscaffold_5G00379080 |
| rosa_rugosa | Rorug04G0305500 Rorug04G0305600 |
| rosa_samantha | Rh4AG357200 Rh4BG368100 Rh4CG382100 Rh4DG362900 Rh7CG239700 |
| rosa_wichuraiana | Rw0G011550 Rw0G016120 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 2182 |
| AatII | GACGTC | 1 cut(s) | 2688 |
| Acc36I | ACCTGC | 1 cut(s) | 2182 |
| AccB1I | GGYRCC | 4 cut(s) | 17, 949, 3665, 3728 |
| AccBSI | CCGCTC | 1 cut(s) | 471 |
| AccI | GTMKAC | 3 cut(s) | 2072, 2818, 3632 |
| AccIII | TCCGGA | 1 cut(s) | 1201 |
| AciI | CCGC | 4 cut(s) | 469, 1124, 1307, 2564 |
| AclWI | GGATC | 3 cut(s) | 2492, 3538, 3611 |
| AcoI | YGGCCR | 2 cut(s) | 3199, 3735 |
| AcuI | CTGAAG | 9 cut(s) | 609, 630, 846, 1350, 1769, 2259, 3153, 3573, 3633 |
| AcyI | GRCGYC | 2 cut(s) | 18, 2685 |
| AdeI | CACNNNGTG | 1 cut(s) | 3275 |
| AfaI | GTAC | 7 cut(s) | 95, 1354, 1802, 1900, 2160, 3184, 3613 |
| AfeI | AGCGCT | 1 cut(s) | 1334 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 81, 111, 248, 1427, 2729, 3744 |
| AflIII | ACRYGT | 6 cut(s) | 688, 876, 2040, 2912, 3361, 3614 |
| AjnI | CCWGG | 6 cut(s) | 24, 1426, 2075, 2243, 2406, 3148 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 1956, 1988, 2712, 2744 |
| Alw21I | GWGCWC | 7 cut(s) | 104, 160, 173, 434, 2630, 2909, 3106 |
| Alw26I | GTCTC | 9 cut(s) | 915, 1715, 1818, 2134, 2159, 2177, 2395, 3052, 3061 |
| Alw44I | GTGCAC | 2 cut(s) | 2905, 3102 |
| AlwI | GGATC | 3 cut(s) | 2492, 3538, 3611 |
| Ama87I | CYCGRG | 1 cut(s) | 427 |
| Aor13HI | TCCGGA | 1 cut(s) | 1201 |
| Aor51HI | AGCGCT | 1 cut(s) | 1334 |
| AoxI | GGCC | 5 cut(s) | 76, 206, 2480, 3199, 3735 |
| ApaLI | GTGCAC | 2 cut(s) | 2905, 3102 |
| ApeKI | GCWGC | 8 cut(s) | 227, 238, 404, 866, 1183, 1928, 2925, 2999 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 3385, 3417 |
| AseI | ATTAAT | 1 cut(s) | 936 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 3781 |
| AspLEI | GCGC | 3 cut(s) | 20, 1157, 1335 |
| AspS9I | GGNCC | 7 cut(s) | 77, 197, 206, 452, 500, 1493, 2480 |
| AsuC2I | CCSGG | 2 cut(s) | 250, 3745 |
| AsuHPI | GGTGA | 5 cut(s) | 43, 1562, 1604, 2366, 3227 |
| AsuNHI | GCTAGC | 1 cut(s) | 2560 |
| AvaI | CYCGRG | 1 cut(s) | 427 |
| AvaII | GGWCC | 4 cut(s) | 197, 452, 500, 1493 |
| AxyI | CCTNAGG | 1 cut(s) | 477 |
| BaeGI | GKGCMC | 2 cut(s) | 2909, 3106 |
| BalI | TGGCCA | 2 cut(s) | 3201, 3737 |
| BanI | GGYRCC | 4 cut(s) | 17, 949, 3665, 3728 |
| BanII | GRGCYC | 3 cut(s) | 104, 160, 434 |
| BauI | CACGAG | 1 cut(s) | 1234 |
| BbsI | GAAGAC | 3 cut(s) | 1455, 3398, 3425 |
| Bbv12I | GWGCWC | 7 cut(s) | 104, 160, 173, 434, 2630, 2909, 3106 |
| BbvI | GCAGC | 8 cut(s) | 214, 250, 416, 878, 1170, 1940, 2912, 3011 |
| BceAI | ACGGC | 5 cut(s) | 5, 31, 2326, 3112, 3716 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 3440, 3474 |
| BciT130I | CCWGG | 6 cut(s) | 26, 1428, 2077, 2245, 2408, 3150 |
| BciVI | GTATCC | 2 cut(s) | 910, 2181 |
| BclI | TGATCA | 3 cut(s) | 1600, 1636, 1711 |
| BcnI | CCSGG | 2 cut(s) | 250, 3745 |
| BcoDI | GTCTC | 9 cut(s) | 915, 1715, 1818, 2134, 2159, 2177, 2395, 3052, 3061 |
| BfaI | CTAG | 7 cut(s) | 108, 582, 1338, 1776, 2484, 2561, 3339 |
| BfmI | CTRYAG | 4 cut(s) | 1926, 2189, 2819, 2878 |
| BfoI | RGCGCY | 2 cut(s) | 21, 1336 |
| BfuAI | ACCTGC | 1 cut(s) | 2182 |
| BfuI | GTATCC | 2 cut(s) | 910, 2181 |
| BglII | AGATCT | 1 cut(s) | 592 |
| BisI | GCNGC | 8 cut(s) | 228, 239, 405, 867, 1184, 1929, 2926, 3000 |
| BlsI | GCNGC | 8 cut(s) | 229, 240, 406, 868, 1185, 1930, 2927, 3001 |
| BmcAI | AGTACT | 1 cut(s) | 95 |
| Bme1390I | CCNGG | 8 cut(s) | 26, 250, 1428, 2077, 2245, 2408, 3150, 3745 |
| Bme18I | GGWCC | 4 cut(s) | 197, 452, 500, 1493 |
| BmeT110I | CYCGRG | 1 cut(s) | 427 |
| BmgT120I | GGNCC | 7 cut(s) | 77, 197, 206, 452, 500, 1493, 2480 |
| BmiI | GGNNCC | 9 cut(s) | 19, 64, 841, 951, 2280, 2481, 2721, 3667, 3730 |
| BmrFI | CCNGG | 8 cut(s) | 26, 250, 1428, 2077, 2245, 2408, 3150, 3745 |
| BmtI | GCTAGC | 1 cut(s) | 2564 |
| BpiI | GAAGAC | 3 cut(s) | 1455, 3398, 3425 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 3505, 3537 |
| BpmI | CTGGAG | 4 cut(s) | 118, 2245, 2429, 3757 |
| Bpu10I | CCTNAGC | 1 cut(s) | 2013 |
| BpuEI | CTTGAG | 4 cut(s) | 1095, 1739, 2037, 2594 |
| BpuMI | CCSGG | 2 cut(s) | 250, 3745 |
| Bsa29I | ATCGAT | 3 cut(s) | 121, 373, 1881 |
| BsaAI | YACGTR | 1 cut(s) | 3636 |
| BsaBI | GATNNNNATC | 2 cut(s) | 123, 1743 |
| BsaHI | GRCGYC | 2 cut(s) | 18, 2685 |
| BsaI | GGTCTC | 2 cut(s) | 915, 1715 |
| BsaJI | CCNNGG | 7 cut(s) | 80, 1098, 1426, 3148, 3547, 3732, 3744 |
| BsaWI | WCCGGW | 1 cut(s) | 1201 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 86, 116, 1402, 1432 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 81, 111, 248, 1427, 2729, 3744 |
| Bse1I | ACTGG | 8 cut(s) | 101, 1360, 1820, 2038, 2262, 2446, 2676, 3500 |
| Bse21I | CCTNAGG | 1 cut(s) | 477 |
| Bse3DI | GCAATG | 4 cut(s) | 445, 1170, 1666, 2765 |
| Bse8I | GATNNNNATC | 2 cut(s) | 123, 1743 |
| BseAI | TCCGGA | 1 cut(s) | 1201 |
| BseBI | CCWGG | 6 cut(s) | 26, 1428, 2077, 2245, 2408, 3150 |
| BseCI | ATCGAT | 3 cut(s) | 121, 373, 1881 |
| BseDI | CCNNGG | 7 cut(s) | 80, 1098, 1426, 3148, 3547, 3732, 3744 |
| BseGI | GGATG | 6 cut(s) | 1168, 1198, 1744, 2591, 2826, 2944 |
| BseJI | GATNNNNATC | 2 cut(s) | 123, 1743 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 81, 111, 248, 1427, 2729, 3744 |
| BseMI | GCAATG | 4 cut(s) | 445, 1170, 1666, 2765 |
| BseNI | ACTGG | 8 cut(s) | 101, 1360, 1820, 2038, 2262, 2446, 2676, 3500 |
| BseRI | GAGGAG | 4 cut(s) | 94, 1313, 2432, 2948 |
| BseSI | GKGCMC | 2 cut(s) | 2909, 3106 |
| BseXI | GCAGC | 8 cut(s) | 214, 250, 416, 878, 1170, 1940, 2912, 3011 |
| BsgI | GTGCAG | 1 cut(s) | 3252 |
| BshFI | GGCC | 5 cut(s) | 78, 208, 2482, 3201, 3737 |
| BshNI | GGYRCC | 4 cut(s) | 17, 949, 3665, 3728 |
| BshVI | ATCGAT | 3 cut(s) | 121, 373, 1881 |
| BsiHKAI | GWGCWC | 7 cut(s) | 104, 160, 173, 434, 2630, 2909, 3106 |
| BsiHKCI | CYCGRG | 1 cut(s) | 427 |
| BsiSI | CCGG | 6 cut(s) | 75, 249, 863, 1202, 1656, 3744 |
| BslFI | GGGAC | 3 cut(s) | 98, 3281, 3761 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 81, 111, 248, 1427, 2729, 3744 |
| BsmAI | GTCTC | 9 cut(s) | 915, 1715, 1818, 2134, 2159, 2177, 2395, 3052, 3061 |
| BsmBI | CGTCTC | 1 cut(s) | 2159 |
| BsmFI | GGGAC | 3 cut(s) | 98, 3281, 3761 |
| BsmI | GAATGC | 5 cut(s) | 1622, 1892, 1971, 2275, 2508 |
| BsnI | GGCC | 5 cut(s) | 78, 208, 2482, 3201, 3737 |
| Bso31I | GGTCTC | 2 cut(s) | 915, 1715 |
| BsoBI | CYCGRG | 1 cut(s) | 427 |
| Bsp1286I | GDGCHC | 7 cut(s) | 104, 160, 173, 434, 2630, 2909, 3106 |
| Bsp13I | TCCGGA | 1 cut(s) | 1201 |
| BspACI | CCGC | 4 cut(s) | 469, 1124, 1307, 2564 |
| BspANI | GGCC | 5 cut(s) | 78, 208, 2482, 3201, 3737 |
| BspDI | ATCGAT | 3 cut(s) | 121, 373, 1881 |
| BspEI | TCCGGA | 1 cut(s) | 1201 |
| BspLI | GGNNCC | 9 cut(s) | 19, 64, 841, 951, 2280, 2481, 2721, 3667, 3730 |
| BspMAI | CTGCAG | 3 cut(s) | 1930, 2193, 2882 |
| BspMI | ACCTGC | 1 cut(s) | 2182 |
| BspOI | GCTAGC | 1 cut(s) | 2564 |
| BspPI | GGATC | 3 cut(s) | 2492, 3538, 3611 |
| BspT107I | GGYRCC | 4 cut(s) | 17, 949, 3665, 3728 |
| BspTNI | GGTCTC | 2 cut(s) | 915, 1715 |
| BsrBI | CCGCTC | 1 cut(s) | 471 |
| BsrDI | GCAATG | 4 cut(s) | 445, 1170, 1666, 2765 |
| BsrI | ACTGG | 8 cut(s) | 101, 1360, 1820, 2038, 2262, 2446, 2676, 3500 |
| BssECI | CCNNGG | 7 cut(s) | 80, 1098, 1426, 3148, 3547, 3732, 3744 |
| BssNAI | GTATAC | 2 cut(s) | 2073, 3633 |
| BssNI | GRCGYC | 2 cut(s) | 18, 2685 |
| BssSI | CACGAG | 1 cut(s) | 1234 |
| BssT1I | CCWWGG | 3 cut(s) | 80, 1098, 3547 |
| Bst1107I | GTATAC | 2 cut(s) | 2073, 3633 |
| Bst2BI | CACGAG | 1 cut(s) | 1234 |
| Bst2UI | CCWGG | 6 cut(s) | 26, 1428, 2077, 2245, 2408, 3150 |
| Bst4CI | ACNGT | 9 cut(s) | 714, 1141, 1384, 1529, 2120, 2210, 2823, 2841, 3215 |
| Bst6I | CTCTTC | 6 cut(s) | 317, 512, 1821, 2380, 2743, 3161 |
| BstACI | GRCGYC | 2 cut(s) | 18, 2685 |
| BstBAI | YACGTR | 1 cut(s) | 3636 |
| BstC8I | GCNNGC | 6 cut(s) | 402, 790, 1311, 2562, 2882, 3519 |
| BstDSI | CCRYGG | 1 cut(s) | 3732 |
| BstEII | GGTNACC | 1 cut(s) | 1550 |
| BstF5I | GGATG | 6 cut(s) | 1168, 1198, 1744, 2591, 2826, 2944 |
| BstH2I | RGCGCY | 2 cut(s) | 21, 1336 |
| BstHHI | GCGC | 3 cut(s) | 20, 1157, 1335 |
| BstMAI | GTCTC | 9 cut(s) | 915, 1715, 1818, 2134, 2159, 2177, 2395, 3052, 3061 |
| BstMWI | GCNNNNNNNGC | 2 cut(s) | 155, 300 |
| BstNI | CCWGG | 6 cut(s) | 26, 1428, 2077, 2245, 2408, 3150 |
| BstNSI | RCATGY | 6 cut(s) | 486, 692, 880, 2916, 3365, 3618 |
| BstPI | GGTNACC | 1 cut(s) | 1550 |
| BstSCI | CCNGG | 8 cut(s) | 24, 248, 1426, 2075, 2243, 2406, 3148, 3743 |
| BstSFI | CTRYAG | 4 cut(s) | 1926, 2189, 2819, 2878 |
| BstSLI | GKGCMC | 2 cut(s) | 2909, 3106 |
| BstV1I | GCAGC | 8 cut(s) | 214, 250, 416, 878, 1170, 1940, 2912, 3011 |
| BstV2I | GAAGAC | 3 cut(s) | 1455, 3398, 3425 |
| BstX2I | RGATCY | 2 cut(s) | 592, 3603 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 1616, 1948 |
| BstYI | RGATCY | 2 cut(s) | 592, 3603 |
| BstZ17I | GTATAC | 2 cut(s) | 2073, 3633 |
| Bsu15I | ATCGAT | 3 cut(s) | 121, 373, 1881 |
| Bsu36I | CCTNAGG | 1 cut(s) | 477 |
| BsuI | GTATCC | 2 cut(s) | 910, 2181 |
| BsuRI | GGCC | 5 cut(s) | 78, 208, 2482, 3201, 3737 |
| BsuTUI | ATCGAT | 3 cut(s) | 121, 373, 1881 |
| BtgI | CCRYGG | 1 cut(s) | 3732 |
| BtsCI | GGATG | 6 cut(s) | 1168, 1198, 1744, 2591, 2826, 2944 |
| BtsI | GCAGTG | 3 cut(s) | 1413, 2007, 3697 |
| BtsIMutI | CAGTG | 7 cut(s) | 1389, 1413, 2007, 2073, 2125, 2846, 3697 |
| BveI | ACCTGC | 1 cut(s) | 2182 |
| Cac8I | GCNNGC | 6 cut(s) | 402, 790, 1311, 2562, 2882, 3519 |
| CfoI | GCGC | 3 cut(s) | 20, 1157, 1335 |
| Cfr13I | GGNCC | 7 cut(s) | 77, 197, 206, 452, 500, 1493, 2480 |
| ClaI | ATCGAT | 3 cut(s) | 121, 373, 1881 |
| CseI | GACGC | 1 cut(s) | 1460 |
| CsiI | ACCWGGT | 1 cut(s) | 2406 |
| Csp6I | GTAC | 7 cut(s) | 94, 1353, 1801, 1899, 2159, 3183, 3612 |
| CviQI | GTAC | 7 cut(s) | 94, 1353, 1801, 1899, 2159, 3183, 3612 |
| DinI | GGCGCC | 1 cut(s) | 19 |
| DraI | TTTAAA | 2 cut(s) | 678, 3682 |
| DraIII | CACNNNGTG | 1 cut(s) | 3275 |
| EaeI | YGGCCR | 2 cut(s) | 3199, 3735 |
| Eam1104I | CTCTTC | 6 cut(s) | 317, 512, 1821, 2380, 2743, 3161 |
| EarI | CTCTTC | 6 cut(s) | 317, 512, 1821, 2380, 2743, 3161 |
| Ecl136II | GAGCTC | 3 cut(s) | 102, 158, 432 |
| Eco130I | CCWWGG | 3 cut(s) | 80, 1098, 3547 |
| Eco24I | GRGCYC | 3 cut(s) | 104, 160, 434 |
| Eco31I | GGTCTC | 2 cut(s) | 915, 1715 |
| Eco32I | GATATC | 3 cut(s) | 125, 600, 1992 |
| Eco47I | GGWCC | 4 cut(s) | 197, 452, 500, 1493 |
| Eco47III | AGCGCT | 1 cut(s) | 1334 |
| Eco53kI | GAGCTC | 3 cut(s) | 102, 158, 432 |
| Eco57I | CTGAAG | 9 cut(s) | 609, 630, 846, 1350, 1769, 2259, 3153, 3573, 3633 |
| Eco81I | CCTNAGG | 1 cut(s) | 477 |
| Eco88I | CYCGRG | 1 cut(s) | 427 |
| Eco91I | GGTNACC | 1 cut(s) | 1550 |
| EcoICRI | GAGCTC | 3 cut(s) | 102, 158, 432 |
| EcoO109I | RGGNCCY | 3 cut(s) | 197, 206, 2480 |
| EcoO65I | GGTNACC | 1 cut(s) | 1550 |
| EcoRI | GAATTC | 5 cut(s) | 929, 2290, 2568, 3171, 3218 |
| EcoRII | CCWGG | 6 cut(s) | 24, 1426, 2075, 2243, 2406, 3148 |
| EcoRV | GATATC | 3 cut(s) | 125, 600, 1992 |
| EcoT14I | CCWWGG | 3 cut(s) | 80, 1098, 3547 |
| EcoT22I | ATGCAT | 3 cut(s) | 1744, 3248, 3675 |
| EcoT38I | GRGCYC | 3 cut(s) | 104, 160, 434 |
| EgeI | GGCGCC | 1 cut(s) | 19 |
| EheI | GGCGCC | 1 cut(s) | 19 |
| ErhI | CCWWGG | 3 cut(s) | 80, 1098, 3547 |
| Esp3I | CGTCTC | 1 cut(s) | 2159 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 2949, 2981 |
| FaqI | GGGAC | 3 cut(s) | 98, 3281, 3761 |
| FauI | CCCGC | 1 cut(s) | 2557 |
| FbaI | TGATCA | 3 cut(s) | 1600, 1636, 1711 |
| FblI | GTMKAC | 3 cut(s) | 2072, 2818, 3632 |
| Fnu4HI | GCNGC | 8 cut(s) | 228, 239, 405, 867, 1184, 1929, 2926, 3000 |
| FokI | GGATG | 6 cut(s) | 1175, 1185, 1751, 2598, 2813, 2951 |
| FriOI | GRGCYC | 3 cut(s) | 104, 160, 434 |
| Fsp4HI | GCNGC | 8 cut(s) | 228, 239, 405, 867, 1184, 1929, 2926, 3000 |
| FspBI | CTAG | 7 cut(s) | 108, 582, 1338, 1776, 2484, 2561, 3339 |
| GlaI | GCGC | 3 cut(s) | 19, 1156, 1334 |
| GluI | GCNGC | 8 cut(s) | 228, 239, 405, 867, 1184, 1929, 2926, 3000 |
| GsuI | CTGGAG | 4 cut(s) | 118, 2245, 2429, 3757 |
| HaeII | RGCGCY | 2 cut(s) | 21, 1336 |
| HaeIII | GGCC | 5 cut(s) | 78, 208, 2482, 3201, 3737 |
| HapII | CCGG | 6 cut(s) | 75, 249, 863, 1202, 1656, 3744 |
| HgaI | GACGC | 1 cut(s) | 1460 |
| HhaI | GCGC | 3 cut(s) | 20, 1157, 1335 |
| Hin1I | GRCGYC | 2 cut(s) | 18, 2685 |
| Hin6I | GCGC | 3 cut(s) | 18, 1155, 1333 |
| HinP1I | GCGC | 3 cut(s) | 18, 1155, 1333 |
| HincII | GTYRAC | 1 cut(s) | 2413 |
| HindII | GTYRAC | 1 cut(s) | 2413 |
| HindIII | AAGCTT | 3 cut(s) | 415, 612, 3659 |
| HpaII | CCGG | 6 cut(s) | 75, 249, 863, 1202, 1656, 3744 |
| HphI | GGTGA | 5 cut(s) | 43, 1562, 1604, 2366, 3227 |
| HpyCH4III | ACNGT | 9 cut(s) | 714, 1141, 1384, 1529, 2120, 2210, 2823, 2841, 3215 |
| HpyCH4IV | ACGT | 5 cut(s) | 532, 2040, 2168, 2685, 3635 |
| HpyF10VI | GCNNNNNNNGC | 2 cut(s) | 155, 300 |
| HpySE526I | ACGT | 5 cut(s) | 532, 2040, 2168, 2685, 3635 |
| Hsp92I | GRCGYC | 2 cut(s) | 18, 2685 |
| HspAI | GCGC | 3 cut(s) | 18, 1155, 1333 |
| KasI | GGCGCC | 1 cut(s) | 17 |
| Kpn2I | TCCGGA | 1 cut(s) | 1201 |
| Ksp22I | TGATCA | 3 cut(s) | 1600, 1636, 1711 |
| Lsp1109I | GCAGC | 8 cut(s) | 214, 250, 416, 878, 1170, 1940, 2912, 3011 |
| MabI | ACCWGGT | 1 cut(s) | 2406 |
| MaeI | CTAG | 7 cut(s) | 108, 582, 1338, 1776, 2484, 2561, 3339 |
| MaeII | ACGT | 5 cut(s) | 532, 2040, 2168, 2685, 3635 |
| MaeIII | GTNAC | 6 cut(s) | 420, 1550, 2114, 2750, 2983, 3209 |
| MbiI | CCGCTC | 1 cut(s) | 471 |
| MfeI | CAATTG | 2 cut(s) | 1497, 3484 |
| MflI | RGATCY | 2 cut(s) | 592, 3603 |
| MhlI | GDGCHC | 7 cut(s) | 104, 160, 173, 434, 2630, 2909, 3106 |
| MlsI | TGGCCA | 2 cut(s) | 3201, 3737 |
| MluNI | TGGCCA | 2 cut(s) | 3201, 3737 |
| Mly113I | GGCGCC | 1 cut(s) | 18 |
| MlyI | GAGTC | 4 cut(s) | 1820, 2179, 2450, 3016 |
| MmeI | TCCRAC | 7 cut(s) | 1102, 1160, 1529, 2233, 2710, 3034, 3484 |
| Mox20I | TGGCCA | 2 cut(s) | 3201, 3737 |
| Mph1103I | ATGCAT | 3 cut(s) | 1744, 3248, 3675 |
| MroI | TCCGGA | 1 cut(s) | 1201 |
| MroXI | GAANNNNTTC | 1 cut(s) | 3781 |
| MscI | TGGCCA | 2 cut(s) | 3201, 3737 |
| MseI | TTAA | 9 cut(s) | 573, 677, 936, 1116, 1433, 2762, 2946, 3531, 3681 |
| MslI | CAYNNNNRTG | 7 cut(s) | 875, 881, 1614, 1747, 2553, 3251, 3471 |
| Msp20I | TGGCCA | 2 cut(s) | 3201, 3737 |
| MspA1I | CMGCKG | 3 cut(s) | 1931, 2324, 3593 |
| MspI | CCGG | 6 cut(s) | 75, 249, 863, 1202, 1656, 3744 |
| MspR9I | CCNGG | 8 cut(s) | 26, 250, 1428, 2077, 2245, 2408, 3150, 3745 |
| MunI | CAATTG | 2 cut(s) | 1497, 3484 |
| Mva1269I | GAATGC | 5 cut(s) | 1622, 1892, 1971, 2275, 2508 |
| MvaI | CCWGG | 6 cut(s) | 26, 1428, 2077, 2245, 2408, 3150 |
| MwoI | GCNNNNNNNGC | 2 cut(s) | 155, 300 |
| NarI | GGCGCC | 1 cut(s) | 18 |
| NciI | CCSGG | 2 cut(s) | 250, 3745 |
| NheI | GCTAGC | 1 cut(s) | 2560 |
| NlaIV | GGNNCC | 9 cut(s) | 19, 64, 841, 951, 2280, 2481, 2721, 3667, 3730 |
| NmuCI | GTSAC | 3 cut(s) | 1550, 2750, 2983 |
| NsiI | ATGCAT | 3 cut(s) | 1744, 3248, 3675 |
| NspI | RCATGY | 6 cut(s) | 486, 692, 880, 2916, 3365, 3618 |
| PaeR7I | CTCGAG | 1 cut(s) | 427 |
| PaqCI | CACCTGC | 1 cut(s) | 2182 |
| PciI | ACATGT | 5 cut(s) | 688, 876, 2912, 3361, 3614 |
| PctI | GAATGC | 5 cut(s) | 1622, 1892, 1971, 2275, 2508 |
| PdmI | GAANNNNTTC | 1 cut(s) | 3781 |
| PflFI | GACNNNGTC | 1 cut(s) | 2841 |
| PfoI | TCCNGGA | 1 cut(s) | 24 |
| PkrI | GCNGC | 8 cut(s) | 229, 240, 406, 868, 1185, 1930, 2927, 3001 |
| PleI | GAGTC | 4 cut(s) | 1819, 2179, 2450, 3015 |
| PluTI | GGCGCC | 1 cut(s) | 21 |
| PpsI | GAGTC | 4 cut(s) | 1819, 2179, 2450, 3015 |
| Ppu21I | YACGTR | 1 cut(s) | 3636 |
| PpuMI | RGGWCCY | 1 cut(s) | 197 |
| PscI | ACATGT | 5 cut(s) | 688, 876, 2912, 3361, 3614 |
| PshBI | ATTAAT | 1 cut(s) | 936 |
| Psp124BI | GAGCTC | 3 cut(s) | 104, 160, 434 |
| Psp5II | RGGWCCY | 1 cut(s) | 197 |
| Psp6I | CCWGG | 6 cut(s) | 24, 1426, 2075, 2243, 2406, 3148 |
| PspEI | GGTNACC | 1 cut(s) | 1550 |
| PspGI | CCWGG | 6 cut(s) | 24, 1426, 2075, 2243, 2406, 3148 |
| PspN4I | GGNNCC | 9 cut(s) | 19, 64, 841, 951, 2280, 2481, 2721, 3667, 3730 |
| PspPI | GGNCC | 7 cut(s) | 77, 197, 206, 452, 500, 1493, 2480 |
| PspPPI | RGGWCCY | 1 cut(s) | 197 |
| PspXI | VCTCGAGB | 1 cut(s) | 427 |
| PsrI | GAACNNNNNNTAC | 4 cut(s) | 678, 710, 2107, 2139 |
| PstI | CTGCAG | 3 cut(s) | 1930, 2193, 2882 |
| PsuI | RGATCY | 2 cut(s) | 592, 3603 |
| PsyI | GACNNNGTC | 1 cut(s) | 2841 |
| PvuII | CAGCTG | 3 cut(s) | 1931, 2324, 3593 |
| RsaI | GTAC | 7 cut(s) | 95, 1354, 1802, 1900, 2160, 3184, 3613 |
| RsaNI | GTAC | 7 cut(s) | 94, 1353, 1801, 1899, 2159, 3183, 3612 |
| RseI | CAYNNNNRTG | 7 cut(s) | 875, 881, 1614, 1747, 2553, 3251, 3471 |
| SacI | GAGCTC | 3 cut(s) | 104, 160, 434 |
| SaqAI | TTAA | 9 cut(s) | 573, 677, 936, 1116, 1433, 2762, 2946, 3531, 3681 |
| SatI | GCNGC | 8 cut(s) | 228, 239, 405, 867, 1184, 1929, 2926, 3000 |
| Sau96I | GGNCC | 7 cut(s) | 77, 197, 206, 452, 500, 1493, 2480 |
| ScaI | AGTACT | 1 cut(s) | 95 |
| SchI | GAGTC | 4 cut(s) | 1820, 2179, 2450, 3016 |
| ScrFI | CCNGG | 8 cut(s) | 26, 250, 1428, 2077, 2245, 2408, 3150, 3745 |
| SduI | GDGCHC | 7 cut(s) | 104, 160, 173, 434, 2630, 2909, 3106 |
| SexAI | ACCWGGT | 1 cut(s) | 2406 |
| SfcI | CTRYAG | 4 cut(s) | 1926, 2189, 2819, 2878 |
| SfoI | GGCGCC | 1 cut(s) | 19 |
| Sfr274I | CTCGAG | 1 cut(s) | 427 |
| SinI | GGWCC | 4 cut(s) | 197, 452, 500, 1493 |
| SlaI | CTCGAG | 1 cut(s) | 427 |
| SmiMI | CAYNNNNRTG | 7 cut(s) | 875, 881, 1614, 1747, 2553, 3251, 3471 |
| SmlI | CTYRAG | 5 cut(s) | 427, 1110, 1718, 2052, 2573 |
| SmoI | CTYRAG | 5 cut(s) | 427, 1110, 1718, 2052, 2573 |
| SsiI | CCGC | 4 cut(s) | 469, 1124, 1307, 2564 |
| SspDI | GGCGCC | 1 cut(s) | 17 |
| SspI | AATATT | 1 cut(s) | 1249 |
| SspMI | CTAG | 7 cut(s) | 108, 582, 1338, 1776, 2484, 2561, 3339 |
| SstI | GAGCTC | 3 cut(s) | 104, 160, 434 |
| StyD4I | CCNGG | 8 cut(s) | 24, 248, 1426, 2075, 2243, 2406, 3148, 3743 |
| StyI | CCWWGG | 3 cut(s) | 80, 1098, 3547 |
| TaaI | ACNGT | 9 cut(s) | 714, 1141, 1384, 1529, 2120, 2210, 2823, 2841, 3215 |
| TaiI | ACGT | 5 cut(s) | 535, 2043, 2171, 2688, 3638 |
| TaqI | TCGA | 7 cut(s) | 45, 121, 154, 373, 428, 1881, 3389 |
| TatI | WGTACW | 2 cut(s) | 93, 3182 |
| Tru1I | TTAA | 9 cut(s) | 573, 677, 936, 1116, 1433, 2762, 2946, 3531, 3681 |
| Tru9I | TTAA | 9 cut(s) | 573, 677, 936, 1116, 1433, 2762, 2946, 3531, 3681 |
| TscAI | CASTG | 7 cut(s) | 1389, 1420, 2014, 2073, 2125, 2846, 3697 |
| TseFI | GTSAC | 3 cut(s) | 1550, 2750, 2983 |
| TseI | GCWGC | 8 cut(s) | 227, 238, 404, 866, 1183, 1928, 2925, 2999 |
| Tsp45I | GTSAC | 3 cut(s) | 1550, 2750, 2983 |
| TspGWI | ACGGA | 1 cut(s) | 1880 |
| TspRI | CASTG | 7 cut(s) | 1389, 1420, 2014, 2073, 2125, 2846, 3697 |
| Tth111I | GACNNNGTC | 1 cut(s) | 2841 |
| VneI | GTGCAC | 2 cut(s) | 2905, 3102 |
| VpaK11BI | GGWCC | 4 cut(s) | 197, 452, 500, 1493 |
| VspI | ATTAAT | 1 cut(s) | 936 |
| XceI | RCATGY | 6 cut(s) | 486, 692, 880, 2916, 3365, 3618 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 2963, 3507 |
| XhoI | CTCGAG | 1 cut(s) | 427 |
| XmiI | GTMKAC | 3 cut(s) | 2072, 2818, 3632 |
| XmnI | GAANNNNTTC | 1 cut(s) | 3781 |
| XspI | CTAG | 7 cut(s) | 108, 582, 1338, 1776, 2484, 2561, 3339 |
| ZraI | GACGTC | 1 cut(s) | 2686 |
| ZrmI | AGTACT | 1 cut(s) | 95 |
| Zsp2I | ATGCAT | 3 cut(s) | 1744, 3248, 3675 |