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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G26330 AT1G26330 |
| fragaria_vesca | FvH4_4g29660 FvH4_4g29660 FvH4_4g29660 FvH4_4g29660 FvH4_4g29660 FvH4_4g29660 FvH4_4g29660 FvH4_4g29660 FvH4_4g29660 FvH4_4g29660 FvH4_4g29660 FvH4_4g29660 FvH4_4g29660 FvH4_7g33791 |
| malus_domestica | MD16G1059100.v1.1 |
| prunus_persica | Prupe.1G290000_v2.0.a1 |
| pyrus_communis | pycom16g05150 |
| rosa_chinensis | RchiOBHm_Chr4g0437911 |
| rosa_laevigata | RLG00000006401 |
| rosa_multiflora | Rmu_sc0008907.1_g000008 |
| rosa_roxburghii | Rroxscaffold_5G00379080 |
| rosa_rugosa | Rorug04G0305500 Rorug04G0305600 |
| rosa_samantha | Rh4AG357200 Rh4BG368100 Rh4CG382100 Rh4DG362900 Rh7CG239700 |
| rosa_wichuraiana | Rw0G011550 Rw0G016120 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 2233 |
| Acc36I | ACCTGC | 1 cut(s) | 2233 |
| Acc65I | GGTACC | 2 cut(s) | 938, 3322 |
| AccB1I | GGYRCC | 5 cut(s) | 17, 938, 3322, 3719, 3782 |
| AccBSI | CCGCTC | 1 cut(s) | 492 |
| AccI | GTMKAC | 4 cut(s) | 2075, 2123, 2763, 2872 |
| AciI | CCGC | 6 cut(s) | 21, 304, 490, 1142, 3645, 3744 |
| AclWI | GGATC | 6 cut(s) | 129, 1979, 2546, 2835, 2859, 3665 |
| AcoI | YGGCCR | 3 cut(s) | 1185, 3253, 3789 |
| AcsI | RAATTY | 8 cut(s) | 189, 281, 2029, 2622, 3225, 3272, 3379, 3616 |
| AcyI | GRCGYC | 1 cut(s) | 18 |
| AfaI | GTAC | 9 cut(s) | 98, 175, 750, 940, 1847, 2211, 3238, 3324, 3667 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 84, 114, 650, 1345, 2783, 3798 |
| AflIII | ACRYGT | 3 cut(s) | 897, 2966, 3415 |
| AgeI | ACCGGT | 1 cut(s) | 751 |
| AhlI | ACTAGT | 1 cut(s) | 3679 |
| AjnI | CCWGG | 4 cut(s) | 862, 2126, 2460, 3202 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 2766, 2798 |
| Alw21I | GWGCWC | 6 cut(s) | 107, 163, 455, 2684, 2963, 3160 |
| Alw26I | GTCTC | 8 cut(s) | 655, 936, 1760, 1863, 2185, 2210, 2449, 3115 |
| Alw44I | GTGCAC | 2 cut(s) | 2959, 3156 |
| AlwI | GGATC | 6 cut(s) | 129, 1979, 2546, 2835, 2859, 3665 |
| Ama87I | CYCGRG | 1 cut(s) | 448 |
| AoxI | GGCC | 6 cut(s) | 79, 1185, 2534, 2719, 3253, 3789 |
| ApaLI | GTGCAC | 2 cut(s) | 2959, 3156 |
| ApeKI | GCWGC | 6 cut(s) | 230, 407, 425, 887, 1727, 2060 |
| ApoI | RAATTY | 8 cut(s) | 189, 281, 2029, 2622, 3225, 3272, 3379, 3616 |
| AsiGI | ACCGGT | 1 cut(s) | 751 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 3838 |
| Asp718I | GGTACC | 2 cut(s) | 938, 3322 |
| AspLEI | GCGC | 3 cut(s) | 20, 1111, 3828 |
| AspS9I | GGNCC | 8 cut(s) | 80, 200, 209, 860, 1511, 2174, 2372, 2534 |
| AsuC2I | CCSGG | 2 cut(s) | 253, 3799 |
| AsuHPI | GGTGA | 7 cut(s) | 46, 1580, 2420, 3281, 3548, 3595, 3607 |
| AsuNHI | GCTAGC | 1 cut(s) | 3571 |
| AvaI | CYCGRG | 1 cut(s) | 448 |
| AvaII | GGWCC | 6 cut(s) | 200, 209, 860, 1511, 2174, 2372 |
| BaeGI | GKGCMC | 2 cut(s) | 2963, 3160 |
| BalI | TGGCCA | 2 cut(s) | 1187, 3791 |
| BanI | GGYRCC | 5 cut(s) | 17, 938, 3322, 3719, 3782 |
| BanII | GRGCYC | 4 cut(s) | 107, 163, 455, 1352 |
| BbsI | GAAGAC | 4 cut(s) | 526, 957, 1080, 3479 |
| Bbv12I | GWGCWC | 6 cut(s) | 107, 163, 455, 2684, 2963, 3160 |
| BbvI | GCAGC | 6 cut(s) | 217, 419, 437, 899, 1714, 2047 |
| BceAI | ACGGC | 3 cut(s) | 8, 31, 3770 |
| BciT130I | CCWGG | 4 cut(s) | 864, 2128, 2462, 3204 |
| BciVI | GTATCC | 4 cut(s) | 144, 631, 1385, 1588 |
| BclI | TGATCA | 3 cut(s) | 1558, 1618, 1756 |
| BcnI | CCSGG | 2 cut(s) | 253, 3799 |
| BcoDI | GTCTC | 8 cut(s) | 655, 936, 1760, 1863, 2185, 2210, 2449, 3115 |
| BcuI | ACTAGT | 1 cut(s) | 3679 |
| BfaI | CTAG | 8 cut(s) | 111, 471, 1353, 2615, 3090, 3393, 3572, 3680 |
| BfmI | CTRYAG | 4 cut(s) | 1977, 2240, 2498, 2932 |
| BfoI | RGCGCY | 1 cut(s) | 21 |
| BfuAI | ACCTGC | 1 cut(s) | 2233 |
| BfuI | GTATCC | 4 cut(s) | 144, 631, 1385, 1588 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 884 |
| BglII | AGATCT | 1 cut(s) | 613 |
| BisI | GCNGC | 7 cut(s) | 21, 231, 408, 426, 888, 1728, 2061 |
| BlsI | GCNGC | 7 cut(s) | 22, 232, 409, 427, 889, 1729, 2062 |
| BmcAI | AGTACT | 1 cut(s) | 98 |
| Bme1390I | CCNGG | 6 cut(s) | 253, 864, 2128, 2462, 3204, 3799 |
| Bme18I | GGWCC | 6 cut(s) | 200, 209, 860, 1511, 2174, 2372 |
| BmeT110I | CYCGRG | 1 cut(s) | 448 |
| BmgT120I | GGNCC | 8 cut(s) | 80, 200, 209, 860, 1511, 2174, 2372, 2534 |
| BmiI | GGNNCC | 9 cut(s) | 19, 67, 201, 940, 2373, 2775, 3324, 3721, 3784 |
| BmrFI | CCNGG | 6 cut(s) | 253, 864, 2128, 2462, 3204, 3799 |
| BmrI | ACTGGG | 3 cut(s) | 1830, 1931, 3126 |
| BmsI | GCATC | 8 cut(s) | 982, 1459, 1774, 2630, 3204, 3309, 3502, 3736 |
| BmtI | GCTAGC | 1 cut(s) | 3575 |
| BmuI | ACTGGG | 3 cut(s) | 1830, 1931, 3126 |
| BpiI | GAAGAC | 4 cut(s) | 526, 957, 1080, 3479 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 3559, 3591 |
| BpmI | CTGGAG | 3 cut(s) | 121, 2299, 3814 |
| BpuEI | CTTGAG | 3 cut(s) | 1874, 2088, 2648 |
| BpuMI | CCSGG | 2 cut(s) | 253, 3799 |
| Bsa29I | ATCGAT | 2 cut(s) | 124, 1926 |
| BsaAI | YACGTR | 1 cut(s) | 1576 |
| BsaBI | GATNNNNATC | 2 cut(s) | 126, 1557 |
| BsaHI | GRCGYC | 1 cut(s) | 18 |
| BsaI | GGTCTC | 2 cut(s) | 936, 1760 |
| BsaJI | CCNNGG | 6 cut(s) | 83, 1015, 1176, 3202, 3786, 3798 |
| BsaWI | WCCGGW | 1 cut(s) | 751 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 89, 119, 1420, 1450 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 84, 114, 650, 1345, 2783, 3798 |
| Bse118I | RCCGGY | 1 cut(s) | 751 |
| Bse3DI | GCAATG | 4 cut(s) | 1188, 1429, 1684, 1711 |
| Bse8I | GATNNNNATC | 2 cut(s) | 126, 1557 |
| BseBI | CCWGG | 4 cut(s) | 864, 2128, 2462, 3204 |
| BseCI | ATCGAT | 2 cut(s) | 124, 1926 |
| BseDI | CCNNGG | 6 cut(s) | 83, 1015, 1176, 3202, 3786, 3798 |
| BseGI | GGATG | 8 cut(s) | 575, 913, 1186, 1439, 1789, 2645, 2650, 3300 |
| BseJI | GATNNNNATC | 2 cut(s) | 126, 1557 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 84, 114, 650, 1345, 2783, 3798 |
| BseMI | GCAATG | 4 cut(s) | 1188, 1429, 1684, 1711 |
| BseMII | CTCAG | 6 cut(s) | 841, 947, 1424, 1966, 2205, 2976 |
| BseRI | GAGGAG | 3 cut(s) | 97, 1328, 3002 |
| BseSI | GKGCMC | 2 cut(s) | 2963, 3160 |
| BseXI | GCAGC | 6 cut(s) | 217, 419, 437, 899, 1714, 2047 |
| BshFI | GGCC | 6 cut(s) | 81, 1187, 2536, 2721, 3255, 3791 |
| BshNI | GGYRCC | 5 cut(s) | 17, 938, 3322, 3719, 3782 |
| BshTI | ACCGGT | 1 cut(s) | 751 |
| BshVI | ATCGAT | 2 cut(s) | 124, 1926 |
| BsiHKAI | GWGCWC | 6 cut(s) | 107, 163, 455, 2684, 2963, 3160 |
| BsiHKCI | CYCGRG | 1 cut(s) | 448 |
| BsiSI | CCGG | 6 cut(s) | 78, 252, 752, 884, 2825, 3798 |
| BslFI | GGGAC | 2 cut(s) | 101, 3815 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 84, 114, 650, 1345, 2783, 3798 |
| BsmAI | GTCTC | 8 cut(s) | 655, 936, 1760, 1863, 2185, 2210, 2449, 3115 |
| BsmFI | GGGAC | 2 cut(s) | 101, 3815 |
| BsmI | GAATGC | 5 cut(s) | 1640, 1937, 2329, 2562, 2998 |
| BsnI | GGCC | 6 cut(s) | 81, 1187, 2536, 2721, 3255, 3791 |
| Bso31I | GGTCTC | 2 cut(s) | 936, 1760 |
| BsoBI | CYCGRG | 1 cut(s) | 448 |
| Bsp1286I | GDGCHC | 7 cut(s) | 107, 163, 455, 1352, 2684, 2963, 3160 |
| Bsp19I | CCATGG | 1 cut(s) | 1176 |
| BspACI | CCGC | 6 cut(s) | 21, 304, 490, 1142, 3645, 3744 |
| BspANI | GGCC | 6 cut(s) | 81, 1187, 2536, 2721, 3255, 3791 |
| BspCNI | CTCAG | 6 cut(s) | 840, 946, 1423, 1965, 2206, 2977 |
| BspDI | ATCGAT | 2 cut(s) | 124, 1926 |
| BspLI | GGNNCC | 9 cut(s) | 19, 67, 201, 940, 2373, 2775, 3324, 3721, 3784 |
| BspMAI | CTGCAG | 3 cut(s) | 1981, 2244, 2936 |
| BspMI | ACCTGC | 1 cut(s) | 2233 |
| BspOI | GCTAGC | 1 cut(s) | 3575 |
| BspPI | GGATC | 6 cut(s) | 129, 1979, 2546, 2835, 2859, 3665 |
| BspT107I | GGYRCC | 5 cut(s) | 17, 938, 3322, 3719, 3782 |
| BspTNI | GGTCTC | 2 cut(s) | 936, 1760 |
| BsrBI | CCGCTC | 1 cut(s) | 492 |
| BsrDI | GCAATG | 4 cut(s) | 1188, 1429, 1684, 1711 |
| BsrFI | RCCGGY | 1 cut(s) | 751 |
| BssAI | RCCGGY | 1 cut(s) | 751 |
| BssECI | CCNNGG | 6 cut(s) | 83, 1015, 1176, 3202, 3786, 3798 |
| BssNAI | GTATAC | 1 cut(s) | 2124 |
| BssNI | GRCGYC | 1 cut(s) | 18 |
| BssT1I | CCWWGG | 3 cut(s) | 83, 1015, 1176 |
| Bst1107I | GTATAC | 1 cut(s) | 2124 |
| Bst2UI | CCWGG | 4 cut(s) | 864, 2128, 2462, 3204 |
| Bst6I | CTCTTC | 5 cut(s) | 320, 533, 759, 1866, 3215 |
| BstACI | GRCGYC | 1 cut(s) | 18 |
| BstBAI | YACGTR | 1 cut(s) | 1576 |
| BstC8I | GCNNGC | 4 cut(s) | 405, 1702, 2936, 3573 |
| BstDSI | CCRYGG | 2 cut(s) | 1176, 3786 |
| BstEII | GGTNACC | 1 cut(s) | 1568 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1343 |
| BstF5I | GGATG | 8 cut(s) | 575, 913, 1186, 1439, 1789, 2645, 2650, 3300 |
| BstH2I | RGCGCY | 1 cut(s) | 21 |
| BstHHI | GCGC | 3 cut(s) | 20, 1111, 3828 |
| BstMAI | GTCTC | 8 cut(s) | 655, 936, 1760, 1863, 2185, 2210, 2449, 3115 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 158, 303, 884 |
| BstNI | CCWGG | 4 cut(s) | 864, 2128, 2462, 3204 |
| BstNSI | RCATGY | 5 cut(s) | 901, 1489, 1791, 2970, 3419 |
| BstPI | GGTNACC | 1 cut(s) | 1568 |
| BstSCI | CCNGG | 6 cut(s) | 251, 862, 2126, 2460, 3202, 3797 |
| BstSFI | CTRYAG | 4 cut(s) | 1977, 2240, 2498, 2932 |
| BstSLI | GKGCMC | 2 cut(s) | 2963, 3160 |
| BstV1I | GCAGC | 6 cut(s) | 217, 419, 437, 899, 1714, 2047 |
| BstV2I | GAAGAC | 4 cut(s) | 526, 957, 1080, 3479 |
| BstX2I | RGATCY | 4 cut(s) | 613, 2827, 2864, 3657 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1183 |
| BstYI | RGATCY | 4 cut(s) | 613, 2827, 2864, 3657 |
| BstZ17I | GTATAC | 1 cut(s) | 2124 |
| Bsu15I | ATCGAT | 2 cut(s) | 124, 1926 |
| BsuI | GTATCC | 4 cut(s) | 144, 631, 1385, 1588 |
| BsuRI | GGCC | 6 cut(s) | 81, 1187, 2536, 2721, 3255, 3791 |
| BsuTUI | ATCGAT | 2 cut(s) | 124, 1926 |
| BtgI | CCRYGG | 2 cut(s) | 1176, 3786 |
| BtsCI | GGATG | 8 cut(s) | 575, 913, 1186, 1439, 1789, 2645, 2650, 3300 |
| BtsI | GCAGTG | 1 cut(s) | 1431 |
| BtsIMutI | CAGTG | 7 cut(s) | 729, 1233, 1407, 1431, 2176, 2676, 2900 |
| BveI | ACCTGC | 1 cut(s) | 2233 |
| Cac8I | GCNNGC | 4 cut(s) | 405, 1702, 2936, 3573 |
| CfoI | GCGC | 3 cut(s) | 20, 1111, 3828 |
| Cfr10I | RCCGGY | 1 cut(s) | 751 |
| Cfr13I | GGNCC | 8 cut(s) | 80, 200, 209, 860, 1511, 2174, 2372, 2534 |
| ClaI | ATCGAT | 2 cut(s) | 124, 1926 |
| CseI | GACGC | 2 cut(s) | 2319, 2961 |
| CsiI | ACCWGGT | 1 cut(s) | 2460 |
| Csp6I | GTAC | 9 cut(s) | 97, 174, 749, 939, 1846, 2210, 3237, 3323, 3666 |
| CspAI | ACCGGT | 1 cut(s) | 751 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 708, 743, 2152, 2187 |
| CviQI | GTAC | 9 cut(s) | 97, 174, 749, 939, 1846, 2210, 3237, 3323, 3666 |
| DinI | GGCGCC | 1 cut(s) | 19 |
| DraI | TTTAAA | 5 cut(s) | 370, 699, 2037, 3295, 3736 |
| EaeI | YGGCCR | 3 cut(s) | 1185, 3253, 3789 |
| Eam1104I | CTCTTC | 5 cut(s) | 320, 533, 759, 1866, 3215 |
| EarI | CTCTTC | 5 cut(s) | 320, 533, 759, 1866, 3215 |
| Ecl136II | GAGCTC | 3 cut(s) | 105, 161, 453 |
| Eco130I | CCWWGG | 3 cut(s) | 83, 1015, 1176 |
| Eco24I | GRGCYC | 4 cut(s) | 107, 163, 455, 1352 |
| Eco31I | GGTCTC | 2 cut(s) | 936, 1760 |
| Eco32I | GATATC | 2 cut(s) | 128, 1593 |
| Eco47I | GGWCC | 6 cut(s) | 200, 209, 860, 1511, 2174, 2372 |
| Eco53kI | GAGCTC | 3 cut(s) | 105, 161, 453 |
| Eco88I | CYCGRG | 1 cut(s) | 448 |
| Eco91I | GGTNACC | 1 cut(s) | 1568 |
| EcoICRI | GAGCTC | 3 cut(s) | 105, 161, 453 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1343 |
| EcoO109I | RGGNCCY | 2 cut(s) | 200, 209 |
| EcoO65I | GGTNACC | 1 cut(s) | 1568 |
| EcoRI | GAATTC | 4 cut(s) | 2622, 3225, 3272, 3616 |
| EcoRII | CCWGG | 4 cut(s) | 862, 2126, 2460, 3202 |
| EcoRV | GATATC | 2 cut(s) | 128, 1593 |
| EcoT14I | CCWWGG | 3 cut(s) | 83, 1015, 1176 |
| EcoT22I | ATGCAT | 3 cut(s) | 1491, 1789, 3729 |
| EcoT38I | GRGCYC | 4 cut(s) | 107, 163, 455, 1352 |
| EgeI | GGCGCC | 1 cut(s) | 19 |
| EheI | GGCGCC | 1 cut(s) | 19 |
| ErhI | CCWWGG | 3 cut(s) | 83, 1015, 1176 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 281, 313, 3003, 3035 |
| FaqI | GGGAC | 2 cut(s) | 101, 3815 |
| FauI | CCCGC | 1 cut(s) | 311 |
| FauNDI | CATATG | 1 cut(s) | 2154 |
| FbaI | TGATCA | 3 cut(s) | 1558, 1618, 1756 |
| FblI | GTMKAC | 4 cut(s) | 2075, 2123, 2763, 2872 |
| Fnu4HI | GCNGC | 7 cut(s) | 21, 231, 408, 426, 888, 1728, 2061 |
| FokI | GGATG | 8 cut(s) | 562, 920, 1193, 1426, 1796, 2637, 2652, 3287 |
| FriOI | GRGCYC | 4 cut(s) | 107, 163, 455, 1352 |
| Fsp4HI | GCNGC | 7 cut(s) | 21, 231, 408, 426, 888, 1728, 2061 |
| FspBI | CTAG | 8 cut(s) | 111, 471, 1353, 2615, 3090, 3393, 3572, 3680 |
| GlaI | GCGC | 3 cut(s) | 19, 1110, 3827 |
| GluI | GCNGC | 7 cut(s) | 21, 231, 408, 426, 888, 1728, 2061 |
| GsuI | CTGGAG | 3 cut(s) | 121, 2299, 3814 |
| HaeII | RGCGCY | 1 cut(s) | 21 |
| HaeIII | GGCC | 6 cut(s) | 81, 1187, 2536, 2721, 3255, 3791 |
| HapII | CCGG | 6 cut(s) | 78, 252, 752, 884, 2825, 3798 |
| HgaI | GACGC | 2 cut(s) | 2319, 2961 |
| HhaI | GCGC | 3 cut(s) | 20, 1111, 3828 |
| Hin1I | GRCGYC | 1 cut(s) | 18 |
| Hin6I | GCGC | 3 cut(s) | 18, 1109, 3826 |
| HinP1I | GCGC | 3 cut(s) | 18, 1109, 3826 |
| HincII | GTYRAC | 3 cut(s) | 418, 2467, 2482 |
| HindII | GTYRAC | 3 cut(s) | 418, 2467, 2482 |
| HindIII | AAGCTT | 2 cut(s) | 633, 3713 |
| HpaI | GTTAAC | 1 cut(s) | 418 |
| HpaII | CCGG | 6 cut(s) | 78, 252, 752, 884, 2825, 3798 |
| HphI | GGTGA | 7 cut(s) | 46, 1580, 2420, 3281, 3548, 3595, 3607 |
| HpyCH4IV | ACGT | 1 cut(s) | 1575 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 158, 303, 884 |
| HpySE526I | ACGT | 1 cut(s) | 1575 |
| Hsp92I | GRCGYC | 1 cut(s) | 18 |
| HspAI | GCGC | 3 cut(s) | 18, 1109, 3826 |
| KasI | GGCGCC | 1 cut(s) | 17 |
| KpnI | GGTACC | 2 cut(s) | 942, 3326 |
| Ksp22I | TGATCA | 3 cut(s) | 1558, 1618, 1756 |
| KspAI | GTTAAC | 1 cut(s) | 418 |
| Lsp1109I | GCAGC | 6 cut(s) | 217, 419, 437, 899, 1714, 2047 |
| LweI | GCATC | 8 cut(s) | 982, 1459, 1774, 2630, 3204, 3309, 3502, 3736 |
| MabI | ACCWGGT | 1 cut(s) | 2460 |
| MaeI | CTAG | 8 cut(s) | 111, 471, 1353, 2615, 3090, 3393, 3572, 3680 |
| MaeII | ACGT | 1 cut(s) | 1575 |
| MaeIII | GTNAC | 6 cut(s) | 441, 1568, 2804, 2815, 3263, 3536 |
| MbiI | CCGCTC | 1 cut(s) | 492 |
| MfeI | CAATTG | 2 cut(s) | 1515, 2876 |
| MflI | RGATCY | 4 cut(s) | 613, 2827, 2864, 3657 |
| MhlI | GDGCHC | 7 cut(s) | 107, 163, 455, 1352, 2684, 2963, 3160 |
| MlsI | TGGCCA | 2 cut(s) | 1187, 3791 |
| MluNI | TGGCCA | 2 cut(s) | 1187, 3791 |
| Mly113I | GGCGCC | 1 cut(s) | 18 |
| MlyI | GAGTC | 3 cut(s) | 1865, 2504, 3070 |
| MmeI | TCCRAC | 7 cut(s) | 563, 1123, 1547, 2287, 2764, 3088, 3538 |
| Mox20I | TGGCCA | 2 cut(s) | 1187, 3791 |
| Mph1103I | ATGCAT | 3 cut(s) | 1491, 1789, 3729 |
| MroXI | GAANNNNTTC | 1 cut(s) | 3838 |
| MscI | TGGCCA | 2 cut(s) | 1187, 3791 |
| MslI | CAYNNNNRTG | 5 cut(s) | 896, 902, 1181, 1926, 3305 |
| Msp20I | TGGCCA | 2 cut(s) | 1187, 3791 |
| MspA1I | CMGCKG | 2 cut(s) | 2378, 3647 |
| MspI | CCGG | 6 cut(s) | 78, 252, 752, 884, 2825, 3798 |
| MspR9I | CCNGG | 6 cut(s) | 253, 864, 2128, 2462, 3204, 3799 |
| MunI | CAATTG | 2 cut(s) | 1515, 2876 |
| Mva1269I | GAATGC | 5 cut(s) | 1640, 1937, 2329, 2562, 2998 |
| MvaI | CCWGG | 4 cut(s) | 864, 2128, 2462, 3204 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 158, 303, 884 |
| NarI | GGCGCC | 1 cut(s) | 18 |
| NciI | CCSGG | 2 cut(s) | 253, 3799 |
| NcoI | CCATGG | 1 cut(s) | 1176 |
| NdeI | CATATG | 1 cut(s) | 2154 |
| NheI | GCTAGC | 1 cut(s) | 3571 |
| NlaIV | GGNNCC | 9 cut(s) | 19, 67, 201, 940, 2373, 2775, 3324, 3721, 3784 |
| NmeAIII | GCCGAG | 1 cut(s) | 2562 |
| NmuCI | GTSAC | 3 cut(s) | 1568, 2804, 3536 |
| NsiI | ATGCAT | 3 cut(s) | 1491, 1789, 3729 |
| NspI | RCATGY | 5 cut(s) | 901, 1489, 1791, 2970, 3419 |
| PaeR7I | CTCGAG | 1 cut(s) | 448 |
| PaqCI | CACCTGC | 1 cut(s) | 2233 |
| PciI | ACATGT | 3 cut(s) | 897, 2966, 3415 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 21 |
| PctI | GAATGC | 5 cut(s) | 1640, 1937, 2329, 2562, 2998 |
| PdmI | GAANNNNTTC | 1 cut(s) | 3838 |
| PflFI | GACNNNGTC | 2 cut(s) | 2071, 2895 |
| PfoI | TCCNGGA | 1 cut(s) | 862 |
| PinAI | ACCGGT | 1 cut(s) | 751 |
| PkrI | GCNGC | 7 cut(s) | 22, 232, 409, 427, 889, 1729, 2062 |
| PleI | GAGTC | 3 cut(s) | 1864, 2504, 3069 |
| PluTI | GGCGCC | 1 cut(s) | 21 |
| PpsI | GAGTC | 3 cut(s) | 1864, 2504, 3069 |
| Ppu21I | YACGTR | 1 cut(s) | 1576 |
| PpuMI | RGGWCCY | 2 cut(s) | 200, 209 |
| PscI | ACATGT | 3 cut(s) | 897, 2966, 3415 |
| Psp124BI | GAGCTC | 3 cut(s) | 107, 163, 455 |
| Psp5II | RGGWCCY | 2 cut(s) | 200, 209 |
| Psp6I | CCWGG | 4 cut(s) | 862, 2126, 2460, 3202 |
| PspEI | GGTNACC | 1 cut(s) | 1568 |
| PspGI | CCWGG | 4 cut(s) | 862, 2126, 2460, 3202 |
| PspN4I | GGNNCC | 9 cut(s) | 19, 67, 201, 940, 2373, 2775, 3324, 3721, 3784 |
| PspPI | GGNCC | 8 cut(s) | 80, 200, 209, 860, 1511, 2174, 2372, 2534 |
| PspPPI | RGGWCCY | 2 cut(s) | 200, 209 |
| PspXI | VCTCGAGB | 1 cut(s) | 448 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 699, 731 |
| PstI | CTGCAG | 3 cut(s) | 1981, 2244, 2936 |
| PsuI | RGATCY | 4 cut(s) | 613, 2827, 2864, 3657 |
| PsyI | GACNNNGTC | 2 cut(s) | 2071, 2895 |
| PvuII | CAGCTG | 1 cut(s) | 2378 |
| RsaI | GTAC | 9 cut(s) | 98, 175, 750, 940, 1847, 2211, 3238, 3324, 3667 |
| RsaNI | GTAC | 9 cut(s) | 97, 174, 749, 939, 1846, 2210, 3237, 3323, 3666 |
| RseI | CAYNNNNRTG | 5 cut(s) | 896, 902, 1181, 1926, 3305 |
| SacI | GAGCTC | 3 cut(s) | 107, 163, 455 |
| SatI | GCNGC | 7 cut(s) | 21, 231, 408, 426, 888, 1728, 2061 |
| Sau96I | GGNCC | 8 cut(s) | 80, 200, 209, 860, 1511, 2174, 2372, 2534 |
| ScaI | AGTACT | 1 cut(s) | 98 |
| SchI | GAGTC | 3 cut(s) | 1865, 2504, 3070 |
| ScrFI | CCNGG | 6 cut(s) | 253, 864, 2128, 2462, 3204, 3799 |
| SduI | GDGCHC | 7 cut(s) | 107, 163, 455, 1352, 2684, 2963, 3160 |
| SexAI | ACCWGGT | 1 cut(s) | 2460 |
| SfaNI | GCATC | 8 cut(s) | 982, 1459, 1774, 2630, 3204, 3309, 3502, 3736 |
| SfcI | CTRYAG | 4 cut(s) | 1977, 2240, 2498, 2932 |
| SfoI | GGCGCC | 1 cut(s) | 19 |
| Sfr274I | CTCGAG | 1 cut(s) | 448 |
| SinI | GGWCC | 6 cut(s) | 200, 209, 860, 1511, 2174, 2372 |
| SlaI | CTCGAG | 1 cut(s) | 448 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 896, 902, 1181, 1926, 3305 |
| SmlI | CTYRAG | 4 cut(s) | 448, 1853, 2103, 2627 |
| SmoI | CTYRAG | 4 cut(s) | 448, 1853, 2103, 2627 |
| SpeI | ACTAGT | 1 cut(s) | 3679 |
| SsiI | CCGC | 6 cut(s) | 21, 304, 490, 1142, 3645, 3744 |
| SspDI | GGCGCC | 1 cut(s) | 17 |
| SspI | AATATT | 2 cut(s) | 1264, 3839 |
| SspMI | CTAG | 8 cut(s) | 111, 471, 1353, 2615, 3090, 3393, 3572, 3680 |
| SstI | GAGCTC | 3 cut(s) | 107, 163, 455 |
| StyD4I | CCNGG | 6 cut(s) | 251, 862, 2126, 2460, 3202, 3797 |
| StyI | CCWWGG | 3 cut(s) | 83, 1015, 1176 |
| TaiI | ACGT | 1 cut(s) | 1578 |
| TaqI | TCGA | 7 cut(s) | 124, 157, 221, 449, 1926, 2339, 3443 |
| TatI | WGTACW | 4 cut(s) | 96, 173, 1845, 3236 |
| TauI | GCSGC | 1 cut(s) | 23 |
| TscAI | CASTG | 7 cut(s) | 729, 1240, 1407, 1438, 2176, 2676, 2900 |
| TseFI | GTSAC | 3 cut(s) | 1568, 2804, 3536 |
| TseI | GCWGC | 6 cut(s) | 230, 407, 425, 887, 1727, 2060 |
| Tsp45I | GTSAC | 3 cut(s) | 1568, 2804, 3536 |
| TspGWI | ACGGA | 4 cut(s) | 120, 435, 1782, 1925 |
| TspRI | CASTG | 7 cut(s) | 729, 1240, 1407, 1438, 2176, 2676, 2900 |
| Tth111I | GACNNNGTC | 2 cut(s) | 2071, 2895 |
| VneI | GTGCAC | 2 cut(s) | 2959, 3156 |
| VpaK11BI | GGWCC | 6 cut(s) | 200, 209, 860, 1511, 2174, 2372 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1343 |
| XapI | RAATTY | 8 cut(s) | 189, 281, 2029, 2622, 3225, 3272, 3379, 3616 |
| XbaI | TCTAGA | 1 cut(s) | 470 |
| XceI | RCATGY | 5 cut(s) | 901, 1489, 1791, 2970, 3419 |
| XcmI | CCANNNNNNNNNTGG | 3 cut(s) | 270, 3017, 3561 |
| XhoI | CTCGAG | 1 cut(s) | 448 |
| XmiI | GTMKAC | 4 cut(s) | 2075, 2123, 2763, 2872 |
| XmnI | GAANNNNTTC | 1 cut(s) | 3838 |
| XspI | CTAG | 8 cut(s) | 111, 471, 1353, 2615, 3090, 3393, 3572, 3680 |
| ZrmI | AGTACT | 1 cut(s) | 98 |
| Zsp2I | ATGCAT | 3 cut(s) | 1491, 1789, 3729 |