RchiOBHm_Chr4g0437911

No description available

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
Physical Location & Seq
Forward (+)
60879967 .. 60887237
7271 bp
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UTR
Exon/CDS
Intron
PRQ40612

Sequence Viewer

Length: 3876 bp
ATGGCGAACCCTAACGGCGCCGCCGTCAAAGAGAAACCAGACGATCTGGAAATCACCTCCATCGGTTCCCTCTACTCCGGCCCTTGGGACAAGAAGTACTGGAGCTCCTCTAGGGGGAAGGATCGATATCCGTATCCGATTGGGTATGGAGCTGTTCGAGCTCATAATGGGAGTACACATAAAATGGAAATTCAAGAGGGTCCTAAAGGACCTTTATTTTCGATTATTGCTGCCGATGGACAATCATGCTCCGGGCAAACCCCAGATATTGCTTGGGAGAAATTCCAGAAGAAATGCTTTCCCCGCACGAAGATTTGGCATGGGAAGAGATTTTCGTGCAAGATAGATGGTGTGGAGTTTTTTGGGTTTAAAAATCCATTTGTCCAGAGGCTACTTCGGGAGCTGGCAGCAGATGTTAACGGAGCAGCAGAGCAAAGTTTGTTACCCTCGAGCTCCTCCAATGGAGCTTCTAGAACAGACATTGATAACCGCTCCCCAGAGGCATATTCAGACTTGGGAAGACCACAAATCACAGGGAAGAGAAGTAGGAAGCGTGAAAGTGGAAATGCAAAGTCATCCAGTCGGACAGGCATAAATAAGACTACAACTGAAGATCTGGTATCCATTTCTGAAGCTTTGAGTCCAATAAAAGGGAGTAAGAGACATTGTAATAATGGGAATCCCATGCCTTCTTTAAATGAAGAACACGATATACCAGCAGTGTTGCCACCATTAGTGCATTTAGTACCGGTTCATCAAGAAGAGAGTGAGATTTCAGCCAAAGATCATTTGCCATTGGATTCTGTTGGCTTCTTCAATCATCTCAGCAAGGATAATATCCCTGAAGATTCAAATGGTCCTGGAAAATGTAAAGCCACTCCAGCAGCCATCAACATGTCTGTGGATGAAAGAAAACCTGTTGATAGGTCTCAGGGTACCAAGATGGAAGACATTAGTTTTCCAATGGCAACAAATGACCAATATGTAGATGCTACAATTCCACAAGATTGCCAAGGTCTTACTGATGTTGAACTTTTTGCTCCTGATACCTTAGATTTTACACAAGACAAAACAGCAGATTCGTCTTCAACTATCCAACTGTTTGCGCCTGATACCTTAGATTCAGAAGGTAATGATTGCCACTACTTAAATGCAGATAAAAATGCGGATTCTTCTTCAACTATCCAAGATAGAAGCACCATGGATGTGGTCATTGCTGATGGGCTGACTGAATCACATCCGGAAGAAGAAACGCCCACTGTTAAATCAAATGCAAGTTCCCAGAATATTGATTTTGATTCAGTTGGTCAGGAAATGGCAAAGTCCATGATGACATTTCTTCTTCCACAAGCCATTCCACTCCTCAATAAGGGCTCTAGGAAGAAAAAGGGTTCTGGTATCCCTTCAGAAGTTCTGCCTTTTACAGTGAAATCTCAGAAGGAAAGCAATGAAACCACTGCTCCATCCCCTGGTTTAATGCCTTCCAATAAAGATGCAAAGGGGAAAAAGATGCATACCCAATCTACTGATATTGGTCCAATTGCTCCAACAAAGTCTATTATTCCTGACAGTTTAGATGATGATCAAAATGGTGACCACGTATCCAATCACTTGATATCTTTGTCTGATAAGGCTGAACCTGATCAGCATAATTCTGATGGTGCATTCCCTATGAATAGTCATGGACATCTTGTTTCCAGCAATGAGCATAGTCATCATCTTGCTGCCAATGAGCATGGACATCTTCTTGCTGCCAATGAGTATAACAAATTGATAGATGATCAGCAAGAGACCAGAGGAAGCAAGGATGCATGTCCGTCTAAGGAAGTGGGCATGGCTTCAACTGGGAGGCTTCAGGAATGTGGTCAGTACATACTTGAGTCTCTTCCAGTTCGTGCAACTCCATATAGAAAAGTCTTTTCTGAAGAAATCACGGAGAAGTTCCATATCGATGAATGCCCAGTAGGTATTACTCTCAGTTCTAAGAATATGAATGAAACTGCAGTTGATCCTACCAAAGATACTGTTGATGATAACCAAAGAGGCATGTTAAATTCTTTAAATATATCAGAGAAGGAAACTGCTGCTAAGACATTGTCTACCAAAACTGAAAATCTGTCTTTTTCTCAAGTTCCCAAGTTGGTGTATACCAGGAAAAAGGTTCAGACTATATCTCATATGAAAGGCAATAACAGTGGTCCAGTCTCAAAAAGTATAATATGCAAGAACAATGTACCTGAGACATATCCTTCCACAGAAACTCTGCAGGTGGGTTCTTCTGATGACAATTCAAATATAAGGGATTCATTTTGTGCTGAAGCCAAGATTGTTGGACGCTCCAGTTTGAATGCAGAGAAACCTTCGATGAACTCTAAAGCTGTATTAAACAGCATAGGTCCAGCTGTATTACAAGATCAAGCATTATTAGTTGGTGAGAAAGATACTTCATACTTTCACGATTTGTTTGTCTCACATTTAGAAAACCAGGTTGACAAGAATGTGGTTGACCATGAAAACCTCCTACAGTTCAAAGACTCTGAAACATCTCATAAACAAGGGCCGAGTTTCAGTTGTGATCCCAATAGCATTCCATTTGGTTCAGATTTGAAGCCTCACAATATGGAACTTAATAATGGGCTAGTGGGAATTCTTGAGTTTGTGGGATGCTATACCCATCCTGTTCCGGTTTTGTCAGTGTTGTTGAGCACAAAGGGAAATCACATTTACATTTGTGTTTTATGTGGCCTACTGGTTGGTAAGGACATCAGCCTGTTCATCTACAAGGTAGACATTGAGGAACCGAAGGTTGGACACCCTTCTCTTGTTGGTCACACATCAGTAACTTTGCCGGATCTAACCGATTATTTTGGTGGAATGGCTTTGGGAAGATCCTGTCTACAATTGACCCCAGATGGACAGTGTCTTGTTTTACTTGACAGTATTAAAACTCCTTTCTGCAGGCAAGGAAAAACCCATTGTCTGTGCACCACATGTGCGTCAAGCTACTCTGAGGAGAATGCTGTTAAGATTGTCCAAGTAAAACTTGGTTATGTTTCATTAGTGGCAAGATTGAAAGCAGTAGAGAGTCAAAGATGTATATTGGTTTGTGAACCTAGCAATCTTGTTTCTGTTGGAAAGACTGGGAGACTGCATTTGTGGGTCATGGATTCAACATGGAGTGCACAAATGGAATATATGGTTATGCCATCTGAAGATTGCATCTCCCCTGGCATAGTGGAGTTGAAGAGAATTCCAAATTGTACTCATCTAATTGTCGGCCATAATGGTTACGGTGAATTCAGTTTATGGGATATTTTTAAACGCATCCTTGTGTCAAGGTTCTCGGTACCAAGTGCTTCAATTTGTCAATTTTTTCCTATCAGTTTGTTTGCTTGGCAAATGAATTTCCCTGTTTCTAGCCACTTTGATATGGAAGAACATGTCAATCAAATTATGGCTTCAACATCGAAGAAACAATTTTTGTCTGAAGGGGAAGATGTTGCTGTATGTCTTCTTGTTTCATCTTCTGATTTTGATGCTCAACAAGACTATGAATCAGGTGACTGCCACCCAAATCCAGTTGGACGGTGGAGGCTAGCTCTCATGGTGAAAAATACGGTGATCTTTGGAACTGCATTGGATTCAAGGGCTTCTGTCATCGGTGCTTCCGCTGGACTAGGGATCTGTGGTACTTGTGATGGACTTGTGTATATGTGGGAGCTATCTTCAGGAACTAAGCTTGGCACCATGCATCATTTTAAAGGTGGCGGTGTTTCATGTATTTCTACTGATGATTCAAGGTCAGGTGCCGTGGCCATAGCCGGGGACAATCAAGTGTTGGTTTATCTGCGCTCCAGAAAATATTCTGTAAACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1291

Amino Acids

140.8

Weight (kDa)

5.68

Isoelectric Point (pI)

45.06

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 2257
Acc36I ACCTGC 1 cut(s) 2257
Acc65I GGTACC 2 cut(s) 935, 3346
AccB1I GGYRCC 5 cut(s) 17, 935, 3346, 3743, 3806
AccB7I CCANNNNNTGG 1 cut(s) 1469
AccBSI CCGCTC 1 cut(s) 492
AccI GTMKAC 4 cut(s) 2099, 2147, 2787, 2896
AccIII TCCGGA 1 cut(s) 1240
AciI CCGC 6 cut(s) 21, 304, 490, 1166, 3669, 3768
AclWI GGATC 6 cut(s) 129, 2003, 2570, 2859, 2883, 3689
AcoI YGGCCR 2 cut(s) 3277, 3813
AcsI RAATTY 7 cut(s) 189, 281, 2053, 2646, 3249, 3296, 3403
AcyI GRCGYC 1 cut(s) 18
AfaI GTAC 9 cut(s) 98, 175, 747, 937, 1871, 2235, 3262, 3348, 3691
AfiI CCNNNNNNNGG 7 cut(s) 84, 114, 650, 1369, 1469, 2807, 3822
AflIII ACRYGT 3 cut(s) 894, 2990, 3439
AgeI ACCGGT 1 cut(s) 748
AjnI CCWGG 5 cut(s) 859, 1468, 2150, 2484, 3226
AjuI GAANNNNNNNTTGG 2 cut(s) 2790, 2822
Alw21I GWGCWC 6 cut(s) 107, 163, 455, 2708, 2987, 3184
Alw26I GTCTC 8 cut(s) 655, 933, 1784, 1887, 2209, 2234, 2473, 3139
Alw44I GTGCAC 2 cut(s) 2983, 3180
AlwI GGATC 6 cut(s) 129, 2003, 2570, 2859, 2883, 3689
Ama87I CYCGRG 1 cut(s) 448
Aor13HI TCCGGA 1 cut(s) 1240
AoxI GGCC 5 cut(s) 79, 2558, 2743, 3277, 3813
ApaLI GTGCAC 2 cut(s) 2983, 3180
ApeKI GCWGC 7 cut(s) 230, 407, 425, 884, 1724, 1751, 2084
ApoI RAATTY 7 cut(s) 189, 281, 2053, 2646, 3249, 3296, 3403
AsiGI ACCGGT 1 cut(s) 748
Asp700I GAANNNNTTC 1 cut(s) 3862
Asp718I GGTACC 2 cut(s) 935, 3346
AspLEI GCGC 3 cut(s) 20, 1108, 3852
AspS9I GGNCC 8 cut(s) 80, 200, 209, 857, 1535, 2198, 2396, 2558
AsuC2I CCSGG 2 cut(s) 253, 3823
AsuHPI GGTGA 7 cut(s) 46, 1604, 2444, 3305, 3572, 3619, 3631
AsuNHI GCTAGC 1 cut(s) 3595
AvaI CYCGRG 1 cut(s) 448
AvaII GGWCC 6 cut(s) 200, 209, 857, 1535, 2198, 2396
BaeGI GKGCMC 2 cut(s) 2987, 3184
BalI TGGCCA 1 cut(s) 3815
BanI GGYRCC 5 cut(s) 17, 935, 3346, 3743, 3806
BanII GRGCYC 4 cut(s) 107, 163, 455, 1376
BbsI GAAGAC 4 cut(s) 526, 954, 1077, 3503
Bbv12I GWGCWC 6 cut(s) 107, 163, 455, 2708, 2987, 3184
BbvI GCAGC 7 cut(s) 217, 419, 437, 896, 1711, 1738, 2071
BceAI ACGGC 3 cut(s) 8, 31, 3794
BciT130I CCWGG 5 cut(s) 861, 1470, 2152, 2486, 3228
BciVI GTATCC 4 cut(s) 144, 631, 1409, 1612
BclI TGATCA 3 cut(s) 1582, 1642, 1780
BcnI CCSGG 2 cut(s) 253, 3823
BcoDI GTCTC 8 cut(s) 655, 933, 1784, 1887, 2209, 2234, 2473, 3139
BfaI CTAG 8 cut(s) 111, 471, 1377, 2639, 3114, 3417, 3596, 3677
BfmI CTRYAG 4 cut(s) 2001, 2264, 2522, 2956
BfoI RGCGCY 1 cut(s) 21
BfuAI ACCTGC 1 cut(s) 2257
BfuI GTATCC 4 cut(s) 144, 631, 1409, 1612
BglII AGATCT 1 cut(s) 613
BisI GCNGC 8 cut(s) 21, 231, 408, 426, 885, 1725, 1752, 2085
BlsI GCNGC 8 cut(s) 22, 232, 409, 427, 886, 1726, 1753, 2086
BmcAI AGTACT 1 cut(s) 98
Bme1390I CCNGG 7 cut(s) 253, 861, 1470, 2152, 2486, 3228, 3823
Bme18I GGWCC 6 cut(s) 200, 209, 857, 1535, 2198, 2396
BmeT110I CYCGRG 1 cut(s) 448
BmgT120I GGNCC 8 cut(s) 80, 200, 209, 857, 1535, 2198, 2396, 2558
BmiI GGNNCC 8 cut(s) 19, 67, 201, 937, 2799, 3348, 3745, 3808
BmrFI CCNGG 7 cut(s) 253, 861, 1470, 2152, 2486, 3228, 3823
BmrI ACTGGG 3 cut(s) 1854, 1955, 3150
BmsI GCATC 9 cut(s) 979, 1483, 1500, 1798, 2654, 3228, 3333, 3526, 3760
BmtI GCTAGC 1 cut(s) 3599
BmuI ACTGGG 3 cut(s) 1854, 1955, 3150
BpiI GAAGAC 4 cut(s) 526, 954, 1077, 3503
BplI GAGNNNNNCTC 2 cut(s) 3583, 3615
BpmI CTGGAG 4 cut(s) 121, 864, 2323, 3838
BpuEI CTTGAG 3 cut(s) 1898, 2112, 2672
BpuMI CCSGG 2 cut(s) 253, 3823
Bsa29I ATCGAT 2 cut(s) 124, 1950
BsaAI YACGTR 1 cut(s) 1600
BsaBI GATNNNNATC 2 cut(s) 126, 1581
BsaHI GRCGYC 1 cut(s) 18
BsaI GGTCTC 2 cut(s) 933, 1784
BsaJI CCNNGG 7 cut(s) 83, 1012, 1200, 1468, 3226, 3810, 3822
BsaWI WCCGGW 3 cut(s) 748, 1240, 2683
BsaXI ACNNNNNCTCC 4 cut(s) 89, 119, 1444, 1474
Bsc4I CCNNNNNNNGG 7 cut(s) 84, 114, 650, 1369, 1469, 2807, 3822
Bse118I RCCGGY 1 cut(s) 748
Bse3DI GCAATG 3 cut(s) 1212, 1453, 1708
Bse8I GATNNNNATC 2 cut(s) 126, 1581
BseAI TCCGGA 1 cut(s) 1240
BseBI CCWGG 5 cut(s) 861, 1470, 2152, 2486, 3228
BseCI ATCGAT 2 cut(s) 124, 1950
BseDI CCNNGG 7 cut(s) 83, 1012, 1200, 1468, 3226, 3810, 3822
BseGI GGATG 9 cut(s) 575, 910, 1210, 1237, 1463, 1813, 2669, 2674, 3324
BseJI GATNNNNATC 2 cut(s) 126, 1581
BseLI CCNNNNNNNGG 7 cut(s) 84, 114, 650, 1369, 1469, 2807, 3822
BseMI GCAATG 3 cut(s) 1212, 1453, 1708
BseMII CTCAG 6 cut(s) 838, 944, 1448, 1990, 2229, 3000
BseRI GAGGAG 4 cut(s) 97, 445, 1352, 3026
BseSI GKGCMC 2 cut(s) 2987, 3184
BseXI GCAGC 7 cut(s) 217, 419, 437, 896, 1711, 1738, 2071
BshFI GGCC 5 cut(s) 81, 2560, 2745, 3279, 3815
BshNI GGYRCC 5 cut(s) 17, 935, 3346, 3743, 3806
BshTI ACCGGT 1 cut(s) 748
BshVI ATCGAT 2 cut(s) 124, 1950
BsiHKAI GWGCWC 6 cut(s) 107, 163, 455, 2708, 2987, 3184
BsiHKCI CYCGRG 1 cut(s) 448
BsiSI CCGG 7 cut(s) 78, 252, 749, 1241, 2684, 2849, 3822
BslFI GGGAC 2 cut(s) 101, 3839
BslI CCNNNNNNNGG 7 cut(s) 84, 114, 650, 1369, 1469, 2807, 3822
BsmAI GTCTC 8 cut(s) 655, 933, 1784, 1887, 2209, 2234, 2473, 3139
BsmFI GGGAC 2 cut(s) 101, 3839
BsmI GAATGC 5 cut(s) 1664, 1961, 2353, 2586, 3022
BsnI GGCC 5 cut(s) 81, 2560, 2745, 3279, 3815
Bso31I GGTCTC 2 cut(s) 933, 1784
BsoBI CYCGRG 1 cut(s) 448
Bsp1286I GDGCHC 7 cut(s) 107, 163, 455, 1376, 2708, 2987, 3184
Bsp13I TCCGGA 1 cut(s) 1240
Bsp19I CCATGG 1 cut(s) 1200
BspACI CCGC 6 cut(s) 21, 304, 490, 1166, 3669, 3768
BspANI GGCC 5 cut(s) 81, 2560, 2745, 3279, 3815
BspCNI CTCAG 6 cut(s) 837, 943, 1447, 1989, 2230, 3001
BspDI ATCGAT 2 cut(s) 124, 1950
BspEI TCCGGA 1 cut(s) 1240
BspLI GGNNCC 8 cut(s) 19, 67, 201, 937, 2799, 3348, 3745, 3808
BspMAI CTGCAG 3 cut(s) 2005, 2268, 2960
BspMI ACCTGC 1 cut(s) 2257
BspOI GCTAGC 1 cut(s) 3599
BspPI GGATC 6 cut(s) 129, 2003, 2570, 2859, 2883, 3689
BspT107I GGYRCC 5 cut(s) 17, 935, 3346, 3743, 3806
BspTNI GGTCTC 2 cut(s) 933, 1784
BsrBI CCGCTC 1 cut(s) 492
BsrDI GCAATG 3 cut(s) 1212, 1453, 1708
BsrFI RCCGGY 1 cut(s) 748
BssAI RCCGGY 1 cut(s) 748
BssECI CCNNGG 7 cut(s) 83, 1012, 1200, 1468, 3226, 3810, 3822
BssNAI GTATAC 1 cut(s) 2148
BssNI GRCGYC 1 cut(s) 18
BssT1I CCWWGG 3 cut(s) 83, 1012, 1200
Bst1107I GTATAC 1 cut(s) 2148
Bst2UI CCWGG 5 cut(s) 861, 1470, 2152, 2486, 3228
Bst6I CTCTTC 5 cut(s) 320, 533, 756, 1890, 3239
BstACI GRCGYC 1 cut(s) 18
BstBAI YACGTR 1 cut(s) 1600
BstC8I GCNNGC 3 cut(s) 405, 2960, 3597
BstDSI CCRYGG 2 cut(s) 1200, 3810
BstEII GGTNACC 1 cut(s) 1592
BstENI CCTNNNNNAGG 1 cut(s) 1367
BstF5I GGATG 9 cut(s) 575, 910, 1210, 1237, 1463, 1813, 2669, 2674, 3324
BstH2I RGCGCY 1 cut(s) 21
BstHHI GCGC 3 cut(s) 20, 1108, 3852
BstMAI GTCTC 8 cut(s) 655, 933, 1784, 1887, 2209, 2234, 2473, 3139
BstMWI GCNNNNNNNGC 3 cut(s) 158, 303, 881
BstNI CCWGG 5 cut(s) 861, 1470, 2152, 2486, 3228
BstNSI RCATGY 5 cut(s) 898, 1815, 2050, 2994, 3443
BstPI GGTNACC 1 cut(s) 1592
BstSCI CCNGG 7 cut(s) 251, 859, 1468, 2150, 2484, 3226, 3821
BstSFI CTRYAG 4 cut(s) 2001, 2264, 2522, 2956
BstSLI GKGCMC 2 cut(s) 2987, 3184
BstV1I GCAGC 7 cut(s) 217, 419, 437, 896, 1711, 1738, 2071
BstV2I GAAGAC 4 cut(s) 526, 954, 1077, 3503
BstX2I RGATCY 4 cut(s) 613, 2851, 2888, 3681
BstXI CCANNNNNNTGG 1 cut(s) 1207
BstYI RGATCY 4 cut(s) 613, 2851, 2888, 3681
BstZ17I GTATAC 1 cut(s) 2148
Bsu15I ATCGAT 2 cut(s) 124, 1950
BsuI GTATCC 4 cut(s) 144, 631, 1409, 1612
BsuRI GGCC 5 cut(s) 81, 2560, 2745, 3279, 3815
BsuTUI ATCGAT 2 cut(s) 124, 1950
BtgI CCRYGG 2 cut(s) 1200, 3810
BtsCI GGATG 9 cut(s) 575, 910, 1210, 1237, 1463, 1813, 2669, 2674, 3324
BtsI GCAGTG 2 cut(s) 726, 1455
BtsIMutI CAGTG 7 cut(s) 726, 1257, 1431, 1455, 2200, 2700, 2924
BveI ACCTGC 1 cut(s) 2257
Cac8I GCNNGC 3 cut(s) 405, 2960, 3597
CfoI GCGC 3 cut(s) 20, 1108, 3852
Cfr10I RCCGGY 1 cut(s) 748
Cfr13I GGNCC 8 cut(s) 80, 200, 209, 857, 1535, 2198, 2396, 2558
ClaI ATCGAT 2 cut(s) 124, 1950
CseI GACGC 2 cut(s) 2343, 2985
CsiI ACCWGGT 1 cut(s) 2484
Csp6I GTAC 9 cut(s) 97, 174, 746, 936, 1870, 2234, 3261, 3347, 3690
CspAI ACCGGT 1 cut(s) 748
CspCI CAANNNNNGTGG 2 cut(s) 2176, 2211
CviQI GTAC 9 cut(s) 97, 174, 746, 936, 1870, 2234, 3261, 3347, 3690
DinI GGCGCC 1 cut(s) 19
DraI TTTAAA 5 cut(s) 370, 696, 2061, 3319, 3760
EaeI YGGCCR 2 cut(s) 3277, 3813
Eam1104I CTCTTC 5 cut(s) 320, 533, 756, 1890, 3239
EarI CTCTTC 5 cut(s) 320, 533, 756, 1890, 3239
Ecl136II GAGCTC 3 cut(s) 105, 161, 453
Eco130I CCWWGG 3 cut(s) 83, 1012, 1200
Eco24I GRGCYC 4 cut(s) 107, 163, 455, 1376
Eco31I GGTCTC 2 cut(s) 933, 1784
Eco32I GATATC 2 cut(s) 128, 1617
Eco47I GGWCC 6 cut(s) 200, 209, 857, 1535, 2198, 2396
Eco53kI GAGCTC 3 cut(s) 105, 161, 453
Eco88I CYCGRG 1 cut(s) 448
Eco91I GGTNACC 1 cut(s) 1592
EcoICRI GAGCTC 3 cut(s) 105, 161, 453
EcoNI CCTNNNNNAGG 1 cut(s) 1367
EcoO109I RGGNCCY 2 cut(s) 200, 209
EcoO65I GGTNACC 1 cut(s) 1592
EcoRI GAATTC 3 cut(s) 2646, 3249, 3296
EcoRII CCWGG 5 cut(s) 859, 1468, 2150, 2484, 3226
EcoRV GATATC 2 cut(s) 128, 1617
EcoT14I CCWWGG 3 cut(s) 83, 1012, 1200
EcoT22I ATGCAT 3 cut(s) 1515, 1813, 3753
EcoT38I GRGCYC 4 cut(s) 107, 163, 455, 1376
EgeI GGCGCC 1 cut(s) 19
EheI GGCGCC 1 cut(s) 19
ErhI CCWWGG 3 cut(s) 83, 1012, 1200
FalI AAGNNNNNCTT 4 cut(s) 281, 313, 3027, 3059
FaqI GGGAC 2 cut(s) 101, 3839
FauI CCCGC 1 cut(s) 311
FauNDI CATATG 1 cut(s) 2178
FbaI TGATCA 3 cut(s) 1582, 1642, 1780
FblI GTMKAC 4 cut(s) 2099, 2147, 2787, 2896
Fnu4HI GCNGC 8 cut(s) 21, 231, 408, 426, 885, 1725, 1752, 2085
FokI GGATG 9 cut(s) 562, 917, 1217, 1224, 1450, 1820, 2661, 2676, 3311
FriOI GRGCYC 4 cut(s) 107, 163, 455, 1376
Fsp4HI GCNGC 8 cut(s) 21, 231, 408, 426, 885, 1725, 1752, 2085
FspBI CTAG 8 cut(s) 111, 471, 1377, 2639, 3114, 3417, 3596, 3677
GlaI GCGC 3 cut(s) 19, 1107, 3851
GluI GCNGC 8 cut(s) 21, 231, 408, 426, 885, 1725, 1752, 2085
GsuI CTGGAG 4 cut(s) 121, 864, 2323, 3838
HaeII RGCGCY 1 cut(s) 21
HaeIII GGCC 5 cut(s) 81, 2560, 2745, 3279, 3815
HapII CCGG 7 cut(s) 78, 252, 749, 1241, 2684, 2849, 3822
HgaI GACGC 2 cut(s) 2343, 2985
HhaI GCGC 3 cut(s) 20, 1108, 3852
Hin1I GRCGYC 1 cut(s) 18
Hin6I GCGC 3 cut(s) 18, 1106, 3850
HinP1I GCGC 3 cut(s) 18, 1106, 3850
HincII GTYRAC 3 cut(s) 418, 2491, 2506
HindII GTYRAC 3 cut(s) 418, 2491, 2506
HindIII AAGCTT 2 cut(s) 633, 3737
HpaI GTTAAC 1 cut(s) 418
HpaII CCGG 7 cut(s) 78, 252, 749, 1241, 2684, 2849, 3822
HphI GGTGA 7 cut(s) 46, 1604, 2444, 3305, 3572, 3619, 3631
HpyCH4IV ACGT 1 cut(s) 1599
HpyF10VI GCNNNNNNNGC 3 cut(s) 158, 303, 881
HpySE526I ACGT 1 cut(s) 1599
Hsp92I GRCGYC 1 cut(s) 18
HspAI GCGC 3 cut(s) 18, 1106, 3850
KasI GGCGCC 1 cut(s) 17
Kpn2I TCCGGA 1 cut(s) 1240
KpnI GGTACC 2 cut(s) 939, 3350
Ksp22I TGATCA 3 cut(s) 1582, 1642, 1780
KspAI GTTAAC 1 cut(s) 418
Lsp1109I GCAGC 7 cut(s) 217, 419, 437, 896, 1711, 1738, 2071
LweI GCATC 9 cut(s) 979, 1483, 1500, 1798, 2654, 3228, 3333, 3526, 3760
MabI ACCWGGT 1 cut(s) 2484
MaeI CTAG 8 cut(s) 111, 471, 1377, 2639, 3114, 3417, 3596, 3677
MaeII ACGT 1 cut(s) 1599
MaeIII GTNAC 6 cut(s) 441, 1592, 2828, 2839, 3287, 3560
MbiI CCGCTC 1 cut(s) 492
MfeI CAATTG 2 cut(s) 1539, 2900
MflI RGATCY 4 cut(s) 613, 2851, 2888, 3681
MhlI GDGCHC 7 cut(s) 107, 163, 455, 1376, 2708, 2987, 3184
MlsI TGGCCA 1 cut(s) 3815
MluNI TGGCCA 1 cut(s) 3815
Mly113I GGCGCC 1 cut(s) 18
MlyI GAGTC 4 cut(s) 649, 1889, 2528, 3094
MmeI TCCRAC 7 cut(s) 563, 1120, 1571, 2311, 2788, 3112, 3562
Mox20I TGGCCA 1 cut(s) 3815
Mph1103I ATGCAT 3 cut(s) 1515, 1813, 3753
MroI TCCGGA 1 cut(s) 1240
MroXI GAANNNNTTC 1 cut(s) 3862
MscI TGGCCA 1 cut(s) 3815
MslI CAYNNNNRTG 5 cut(s) 893, 899, 1205, 1950, 3329
Msp20I TGGCCA 1 cut(s) 3815
MspA1I CMGCKG 2 cut(s) 2402, 3671
MspI CCGG 7 cut(s) 78, 252, 749, 1241, 2684, 2849, 3822
MspR9I CCNGG 7 cut(s) 253, 861, 1470, 2152, 2486, 3228, 3823
MunI CAATTG 2 cut(s) 1539, 2900
Mva1269I GAATGC 5 cut(s) 1664, 1961, 2353, 2586, 3022
MvaI CCWGG 5 cut(s) 861, 1470, 2152, 2486, 3228
MwoI GCNNNNNNNGC 3 cut(s) 158, 303, 881
NarI GGCGCC 1 cut(s) 18
NciI CCSGG 2 cut(s) 253, 3823
NcoI CCATGG 1 cut(s) 1200
NdeI CATATG 1 cut(s) 2178
NheI GCTAGC 1 cut(s) 3595
NlaIV GGNNCC 8 cut(s) 19, 67, 201, 937, 2799, 3348, 3745, 3808
NmeAIII GCCGAG 1 cut(s) 2586
NmuCI GTSAC 3 cut(s) 1592, 2828, 3560
NsiI ATGCAT 3 cut(s) 1515, 1813, 3753
NspI RCATGY 5 cut(s) 898, 1815, 2050, 2994, 3443
PaeR7I CTCGAG 1 cut(s) 448
PaqCI CACCTGC 1 cut(s) 2257
PciI ACATGT 3 cut(s) 894, 2990, 3439
PcsI WCGNNNNNNNCGW 1 cut(s) 21
PctI GAATGC 5 cut(s) 1664, 1961, 2353, 2586, 3022
PdmI GAANNNNTTC 1 cut(s) 3862
PflFI GACNNNGTC 2 cut(s) 2095, 2919
PflMI CCANNNNNTGG 1 cut(s) 1469
PfoI TCCNGGA 1 cut(s) 859
PinAI ACCGGT 1 cut(s) 748
PkrI GCNGC 8 cut(s) 22, 232, 409, 427, 886, 1726, 1753, 2086
PleI GAGTC 4 cut(s) 648, 1888, 2528, 3093
PluTI GGCGCC 1 cut(s) 21
PpsI GAGTC 4 cut(s) 648, 1888, 2528, 3093
Ppu21I YACGTR 1 cut(s) 1600
PpuMI RGGWCCY 2 cut(s) 200, 209
PscI ACATGT 3 cut(s) 894, 2990, 3439
Psp124BI GAGCTC 3 cut(s) 107, 163, 455
Psp5II RGGWCCY 2 cut(s) 200, 209
Psp6I CCWGG 5 cut(s) 859, 1468, 2150, 2484, 3226
PspEI GGTNACC 1 cut(s) 1592
PspGI CCWGG 5 cut(s) 859, 1468, 2150, 2484, 3226
PspN4I GGNNCC 8 cut(s) 19, 67, 201, 937, 2799, 3348, 3745, 3808
PspPI GGNCC 8 cut(s) 80, 200, 209, 857, 1535, 2198, 2396, 2558
PspPPI RGGWCCY 2 cut(s) 200, 209
PspXI VCTCGAGB 1 cut(s) 448
PsrI GAACNNNNNNTAC 2 cut(s) 696, 728
PstI CTGCAG 3 cut(s) 2005, 2268, 2960
PsuI RGATCY 4 cut(s) 613, 2851, 2888, 3681
PsyI GACNNNGTC 2 cut(s) 2095, 2919
PvuII CAGCTG 1 cut(s) 2402
RsaI GTAC 9 cut(s) 98, 175, 747, 937, 1871, 2235, 3262, 3348, 3691
RsaNI GTAC 9 cut(s) 97, 174, 746, 936, 1870, 2234, 3261, 3347, 3690
RseI CAYNNNNRTG 5 cut(s) 893, 899, 1205, 1950, 3329
SacI GAGCTC 3 cut(s) 107, 163, 455
SatI GCNGC 8 cut(s) 21, 231, 408, 426, 885, 1725, 1752, 2085
Sau96I GGNCC 8 cut(s) 80, 200, 209, 857, 1535, 2198, 2396, 2558
ScaI AGTACT 1 cut(s) 98
SchI GAGTC 4 cut(s) 649, 1889, 2528, 3094
ScrFI CCNGG 7 cut(s) 253, 861, 1470, 2152, 2486, 3228, 3823
SduI GDGCHC 7 cut(s) 107, 163, 455, 1376, 2708, 2987, 3184
SexAI ACCWGGT 1 cut(s) 2484
SfaNI GCATC 9 cut(s) 979, 1483, 1500, 1798, 2654, 3228, 3333, 3526, 3760
SfcI CTRYAG 4 cut(s) 2001, 2264, 2522, 2956
SfoI GGCGCC 1 cut(s) 19
Sfr274I CTCGAG 1 cut(s) 448
SinI GGWCC 6 cut(s) 200, 209, 857, 1535, 2198, 2396
SlaI CTCGAG 1 cut(s) 448
SmiMI CAYNNNNRTG 5 cut(s) 893, 899, 1205, 1950, 3329
SmlI CTYRAG 4 cut(s) 448, 1877, 2127, 2651
SmoI CTYRAG 4 cut(s) 448, 1877, 2127, 2651
SsiI CCGC 6 cut(s) 21, 304, 490, 1166, 3669, 3768
SspDI GGCGCC 1 cut(s) 17
SspI AATATT 2 cut(s) 1288, 3863
SspMI CTAG 8 cut(s) 111, 471, 1377, 2639, 3114, 3417, 3596, 3677
SstI GAGCTC 3 cut(s) 107, 163, 455
StyD4I CCNGG 7 cut(s) 251, 859, 1468, 2150, 2484, 3226, 3821
StyI CCWWGG 3 cut(s) 83, 1012, 1200
TaiI ACGT 1 cut(s) 1602
TaqI TCGA 7 cut(s) 124, 157, 221, 449, 1950, 2363, 3467
TatI WGTACW 4 cut(s) 96, 173, 1869, 3260
TauI GCSGC 1 cut(s) 23
TscAI CASTG 7 cut(s) 726, 1264, 1431, 1462, 2200, 2700, 2924
TseFI GTSAC 3 cut(s) 1592, 2828, 3560
TseI GCWGC 7 cut(s) 230, 407, 425, 884, 1724, 1751, 2084
Tsp45I GTSAC 3 cut(s) 1592, 2828, 3560
TspGWI ACGGA 4 cut(s) 120, 435, 1806, 1949
TspRI CASTG 7 cut(s) 726, 1264, 1431, 1462, 2200, 2700, 2924
Tth111I GACNNNGTC 2 cut(s) 2095, 2919
Van91I CCANNNNNTGG 1 cut(s) 1469
VneI GTGCAC 2 cut(s) 2983, 3180
VpaK11BI GGWCC 6 cut(s) 200, 209, 857, 1535, 2198, 2396
XagI CCTNNNNNAGG 1 cut(s) 1367
XapI RAATTY 7 cut(s) 189, 281, 2053, 2646, 3249, 3296, 3403
XbaI TCTAGA 1 cut(s) 470
XceI RCATGY 5 cut(s) 898, 1815, 2050, 2994, 3443
XcmI CCANNNNNNNNNTGG 3 cut(s) 270, 3041, 3585
XhoI CTCGAG 1 cut(s) 448
XmiI GTMKAC 4 cut(s) 2099, 2147, 2787, 2896
XmnI GAANNNNTTC 1 cut(s) 3862
XspI CTAG 8 cut(s) 111, 471, 1377, 2639, 3114, 3417, 3596, 3677
ZrmI AGTACT 1 cut(s) 98
Zsp2I ATGCAT 3 cut(s) 1515, 1813, 3753
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.