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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G26330 AT1G26330 |
| fragaria_vesca | FvH4_4g29660 FvH4_4g29660 FvH4_4g29660 FvH4_4g29660 FvH4_4g29660 FvH4_4g29660 FvH4_4g29660 FvH4_4g29660 FvH4_4g29660 FvH4_4g29660 FvH4_4g29660 FvH4_4g29660 FvH4_4g29660 FvH4_7g33791 |
| malus_domestica | MD16G1059100.v1.1 |
| prunus_persica | Prupe.1G290000_v2.0.a1 |
| pyrus_communis | pycom16g05150 |
| rosa_chinensis | RchiOBHm_Chr4g0437911 |
| rosa_laevigata | RLG00000006401 |
| rosa_multiflora | Rmu_sc0008907.1_g000008 |
| rosa_roxburghii | Rroxscaffold_5G00379080 |
| rosa_rugosa | Rorug04G0305500 Rorug04G0305600 |
| rosa_samantha | Rh4AG357200 Rh4BG368100 Rh4CG382100 Rh4DG362900 Rh7CG239700 |
| rosa_wichuraiana | Rw0G011550 Rw0G016120 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 2461 |
| Acc36I | ACCTGC | 1 cut(s) | 2461 |
| Acc65I | GGTACC | 1 cut(s) | 938 |
| AccB1I | GGYRCC | 4 cut(s) | 17, 938, 3683, 3746 |
| AccI | GTMKAC | 3 cut(s) | 2303, 2351, 2991 |
| AccIII | TCCGGA | 1 cut(s) | 1246 |
| AciI | CCGC | 8 cut(s) | 21, 304, 1079, 1169, 1836, 2001, 3609, 3708 |
| AclWI | GGATC | 5 cut(s) | 129, 2207, 2774, 3063, 3629 |
| AcoI | YGGCCR | 2 cut(s) | 3328, 3753 |
| AcsI | RAATTY | 6 cut(s) | 189, 281, 2257, 2850, 3300, 3347 |
| AcyI | GRCGYC | 1 cut(s) | 18 |
| AfaI | GTAC | 8 cut(s) | 98, 175, 750, 940, 2075, 2439, 3313, 3631 |
| AfiI | CCNNNNNNNGG | 6 cut(s) | 84, 114, 650, 1375, 3011, 3762 |
| AflIII | ACRYGT | 2 cut(s) | 897, 3379 |
| AgeI | ACCGGT | 1 cut(s) | 751 |
| AjnI | CCWGG | 4 cut(s) | 862, 2354, 2688, 3277 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 2994, 3026 |
| Alw21I | GWGCWC | 5 cut(s) | 107, 163, 455, 2912, 3235 |
| Alw26I | GTCTC | 9 cut(s) | 655, 936, 1823, 1988, 2091, 2413, 2438, 2677, 3190 |
| Alw44I | GTGCAC | 1 cut(s) | 3231 |
| AlwI | GGATC | 5 cut(s) | 129, 2207, 2774, 3063, 3629 |
| Ama87I | CYCGRG | 1 cut(s) | 448 |
| Aor13HI | TCCGGA | 1 cut(s) | 1246 |
| AoxI | GGCC | 5 cut(s) | 79, 2762, 2947, 3328, 3753 |
| ApaLI | GTGCAC | 1 cut(s) | 3231 |
| ApeKI | GCWGC | 7 cut(s) | 407, 425, 887, 1228, 1790, 1955, 2288 |
| ApoI | RAATTY | 6 cut(s) | 189, 281, 2257, 2850, 3300, 3347 |
| AsiGI | ACCGGT | 1 cut(s) | 751 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 3802 |
| Asp718I | GGTACC | 1 cut(s) | 938 |
| AspLEI | GCGC | 3 cut(s) | 20, 1111, 3792 |
| AspS9I | GGNCC | 8 cut(s) | 80, 200, 209, 860, 1574, 2402, 2600, 2762 |
| AsuC2I | CCSGG | 2 cut(s) | 253, 3763 |
| AsuHPI | GGTGA | 8 cut(s) | 46, 749, 1643, 2648, 3356, 3512, 3559, 3571 |
| AsuNHI | GCTAGC | 1 cut(s) | 3535 |
| AvaI | CYCGRG | 1 cut(s) | 448 |
| AvaII | GGWCC | 6 cut(s) | 200, 209, 860, 1574, 2402, 2600 |
| BaeGI | GKGCMC | 1 cut(s) | 3235 |
| BalI | TGGCCA | 1 cut(s) | 3755 |
| BanI | GGYRCC | 4 cut(s) | 17, 938, 3683, 3746 |
| BanII | GRGCYC | 4 cut(s) | 107, 163, 455, 1382 |
| BbsI | GAAGAC | 5 cut(s) | 526, 957, 1080, 1486, 3443 |
| Bbv12I | GWGCWC | 5 cut(s) | 107, 163, 455, 2912, 3235 |
| BbvI | GCAGC | 7 cut(s) | 419, 437, 899, 1215, 1777, 1942, 2275 |
| BceAI | ACGGC | 4 cut(s) | 8, 31, 505, 3734 |
| BciT130I | CCWGG | 4 cut(s) | 864, 2356, 2690, 3279 |
| BciVI | GTATCC | 4 cut(s) | 144, 631, 1415, 1651 |
| BclI | TGATCA | 4 cut(s) | 1621, 1681, 1819, 1984 |
| BcnI | CCSGG | 2 cut(s) | 253, 3763 |
| BcoDI | GTCTC | 9 cut(s) | 655, 936, 1823, 1988, 2091, 2413, 2438, 2677, 3190 |
| BfaI | CTAG | 6 cut(s) | 111, 471, 1383, 2843, 3165, 3536 |
| BfmI | CTRYAG | 3 cut(s) | 2205, 2468, 2726 |
| BfoI | RGCGCY | 1 cut(s) | 21 |
| BfuAI | ACCTGC | 1 cut(s) | 2461 |
| BfuI | GTATCC | 4 cut(s) | 144, 631, 1415, 1651 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 884 |
| BglII | AGATCT | 1 cut(s) | 613 |
| BisI | GCNGC | 8 cut(s) | 21, 408, 426, 888, 1229, 1791, 1956, 2289 |
| BlsI | GCNGC | 8 cut(s) | 22, 409, 427, 889, 1230, 1792, 1957, 2290 |
| BmcAI | AGTACT | 1 cut(s) | 98 |
| Bme1390I | CCNGG | 6 cut(s) | 253, 864, 2356, 2690, 3279, 3763 |
| Bme18I | GGWCC | 6 cut(s) | 200, 209, 860, 1574, 2402, 2600 |
| BmeT110I | CYCGRG | 1 cut(s) | 448 |
| BmgT120I | GGNCC | 8 cut(s) | 80, 200, 209, 860, 1574, 2402, 2600, 2762 |
| BmiI | GGNNCC | 9 cut(s) | 19, 67, 201, 493, 940, 2601, 3003, 3685, 3748 |
| BmrFI | CCNGG | 6 cut(s) | 253, 864, 2356, 2690, 3279, 3763 |
| BmrI | ACTGGG | 3 cut(s) | 2058, 2159, 3201 |
| BmsI | GCATC | 9 cut(s) | 982, 1522, 1539, 1837, 2002, 2858, 3279, 3466, 3700 |
| BmtI | GCTAGC | 1 cut(s) | 3539 |
| BmuI | ACTGGG | 3 cut(s) | 2058, 2159, 3201 |
| BpiI | GAAGAC | 5 cut(s) | 526, 957, 1080, 1486, 3443 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 3523, 3555 |
| BpmI | CTGGAG | 3 cut(s) | 121, 2527, 3778 |
| BpuEI | CTTGAG | 3 cut(s) | 2102, 2316, 2876 |
| BpuMI | CCSGG | 2 cut(s) | 253, 3763 |
| Bsa29I | ATCGAT | 2 cut(s) | 124, 2154 |
| BsaAI | YACGTR | 1 cut(s) | 1639 |
| BsaBI | GATNNNNATC | 2 cut(s) | 126, 1620 |
| BsaHI | GRCGYC | 1 cut(s) | 18 |
| BsaI | GGTCTC | 3 cut(s) | 936, 1823, 1988 |
| BsaJI | CCNNGG | 6 cut(s) | 83, 1015, 1203, 3277, 3750, 3762 |
| BsaWI | WCCGGW | 2 cut(s) | 751, 1246 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 89, 119, 1450, 1480 |
| Bsc4I | CCNNNNNNNGG | 6 cut(s) | 84, 114, 650, 1375, 3011, 3762 |
| Bse118I | RCCGGY | 1 cut(s) | 751 |
| Bse3DI | GCAATG | 7 cut(s) | 466, 1215, 1459, 1747, 1774, 1906, 1939 |
| Bse8I | GATNNNNATC | 2 cut(s) | 126, 1620 |
| BseAI | TCCGGA | 1 cut(s) | 1246 |
| BseBI | CCWGG | 4 cut(s) | 864, 2356, 2690, 3279 |
| BseCI | ATCGAT | 2 cut(s) | 124, 2154 |
| BseDI | CCNNGG | 6 cut(s) | 83, 1015, 1203, 3277, 3750, 3762 |
| BseGI | GGATG | 9 cut(s) | 575, 913, 1213, 1243, 1469, 1852, 2017, 2873, 2878 |
| BseJI | GATNNNNATC | 2 cut(s) | 126, 1620 |
| BseLI | CCNNNNNNNGG | 6 cut(s) | 84, 114, 650, 1375, 3011, 3762 |
| BseMI | GCAATG | 7 cut(s) | 466, 1215, 1459, 1747, 1774, 1906, 1939 |
| BseMII | CTCAG | 5 cut(s) | 841, 947, 1454, 2194, 2433 |
| BseRI | GAGGAG | 2 cut(s) | 97, 1358 |
| BseSI | GKGCMC | 1 cut(s) | 3235 |
| BseXI | GCAGC | 7 cut(s) | 419, 437, 899, 1215, 1777, 1942, 2275 |
| BshFI | GGCC | 5 cut(s) | 81, 2764, 2949, 3330, 3755 |
| BshNI | GGYRCC | 4 cut(s) | 17, 938, 3683, 3746 |
| BshTI | ACCGGT | 1 cut(s) | 751 |
| BshVI | ATCGAT | 2 cut(s) | 124, 2154 |
| BsiHKAI | GWGCWC | 5 cut(s) | 107, 163, 455, 2912, 3235 |
| BsiHKCI | CYCGRG | 1 cut(s) | 448 |
| BsiSI | CCGG | 7 cut(s) | 78, 252, 752, 884, 1247, 3053, 3762 |
| BslFI | GGGAC | 2 cut(s) | 101, 3779 |
| BslI | CCNNNNNNNGG | 6 cut(s) | 84, 114, 650, 1375, 3011, 3762 |
| BsmAI | GTCTC | 9 cut(s) | 655, 936, 1823, 1988, 2091, 2413, 2438, 2677, 3190 |
| BsmFI | GGGAC | 2 cut(s) | 101, 3779 |
| BsmI | GAATGC | 4 cut(s) | 1703, 2165, 2557, 2790 |
| BsnI | GGCC | 5 cut(s) | 81, 2764, 2949, 3330, 3755 |
| Bso31I | GGTCTC | 3 cut(s) | 936, 1823, 1988 |
| BsoBI | CYCGRG | 1 cut(s) | 448 |
| Bsp1286I | GDGCHC | 6 cut(s) | 107, 163, 455, 1382, 2912, 3235 |
| Bsp13I | TCCGGA | 1 cut(s) | 1246 |
| Bsp19I | CCATGG | 1 cut(s) | 1203 |
| BspACI | CCGC | 8 cut(s) | 21, 304, 1079, 1169, 1836, 2001, 3609, 3708 |
| BspANI | GGCC | 5 cut(s) | 81, 2764, 2949, 3330, 3755 |
| BspCNI | CTCAG | 5 cut(s) | 840, 946, 1453, 2193, 2434 |
| BspDI | ATCGAT | 2 cut(s) | 124, 2154 |
| BspEI | TCCGGA | 1 cut(s) | 1246 |
| BspLI | GGNNCC | 9 cut(s) | 19, 67, 201, 493, 940, 2601, 3003, 3685, 3748 |
| BspMAI | CTGCAG | 2 cut(s) | 2209, 2472 |
| BspMI | ACCTGC | 1 cut(s) | 2461 |
| BspOI | GCTAGC | 1 cut(s) | 3539 |
| BspPI | GGATC | 5 cut(s) | 129, 2207, 2774, 3063, 3629 |
| BspT107I | GGYRCC | 4 cut(s) | 17, 938, 3683, 3746 |
| BspTNI | GGTCTC | 3 cut(s) | 936, 1823, 1988 |
| BsrDI | GCAATG | 7 cut(s) | 466, 1215, 1459, 1747, 1774, 1906, 1939 |
| BsrFI | RCCGGY | 1 cut(s) | 751 |
| BssAI | RCCGGY | 1 cut(s) | 751 |
| BssECI | CCNNGG | 6 cut(s) | 83, 1015, 1203, 3277, 3750, 3762 |
| BssNAI | GTATAC | 1 cut(s) | 2352 |
| BssNI | GRCGYC | 1 cut(s) | 18 |
| BssT1I | CCWWGG | 3 cut(s) | 83, 1015, 1203 |
| Bst1107I | GTATAC | 1 cut(s) | 2352 |
| Bst2UI | CCWGG | 4 cut(s) | 864, 2356, 2690, 3279 |
| Bst4CI | ACNGT | 9 cut(s) | 1104, 1267, 1432, 1492, 1610, 2399, 2730, 3528, 3559 |
| Bst6I | CTCTTC | 5 cut(s) | 320, 533, 759, 2094, 3290 |
| BstACI | GRCGYC | 1 cut(s) | 18 |
| BstBAI | YACGTR | 1 cut(s) | 1639 |
| BstC8I | GCNNGC | 4 cut(s) | 405, 1765, 1930, 3537 |
| BstDSI | CCRYGG | 2 cut(s) | 1203, 3750 |
| BstEII | GGTNACC | 1 cut(s) | 1631 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1373 |
| BstF5I | GGATG | 9 cut(s) | 575, 913, 1213, 1243, 1469, 1852, 2017, 2873, 2878 |
| BstH2I | RGCGCY | 1 cut(s) | 21 |
| BstHHI | GCGC | 3 cut(s) | 20, 1111, 3792 |
| BstMAI | GTCTC | 9 cut(s) | 655, 936, 1823, 1988, 2091, 2413, 2438, 2677, 3190 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 158, 303, 884 |
| BstNI | CCWGG | 4 cut(s) | 864, 2356, 2690, 3279 |
| BstNSI | RCATGY | 4 cut(s) | 901, 1854, 2019, 3383 |
| BstPI | GGTNACC | 1 cut(s) | 1631 |
| BstSCI | CCNGG | 6 cut(s) | 251, 862, 2354, 2688, 3277, 3761 |
| BstSFI | CTRYAG | 3 cut(s) | 2205, 2468, 2726 |
| BstSLI | GKGCMC | 1 cut(s) | 3235 |
| BstV1I | GCAGC | 7 cut(s) | 419, 437, 899, 1215, 1777, 1942, 2275 |
| BstV2I | GAAGAC | 5 cut(s) | 526, 957, 1080, 1486, 3443 |
| BstX2I | RGATCY | 3 cut(s) | 613, 3055, 3621 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1210 |
| BstYI | RGATCY | 3 cut(s) | 613, 3055, 3621 |
| BstZ17I | GTATAC | 1 cut(s) | 2352 |
| Bsu15I | ATCGAT | 2 cut(s) | 124, 2154 |
| BsuI | GTATCC | 4 cut(s) | 144, 631, 1415, 1651 |
| BsuRI | GGCC | 5 cut(s) | 81, 2764, 2949, 3330, 3755 |
| BsuTUI | ATCGAT | 2 cut(s) | 124, 2154 |
| BtgI | CCRYGG | 2 cut(s) | 1203, 3750 |
| BtsCI | GGATG | 9 cut(s) | 575, 913, 1213, 1243, 1469, 1852, 2017, 2873, 2878 |
| BtsI | GCAGTG | 2 cut(s) | 729, 1461 |
| BtsIMutI | CAGTG | 6 cut(s) | 729, 1263, 1437, 1461, 2404, 2904 |
| BveI | ACCTGC | 1 cut(s) | 2461 |
| Cac8I | GCNNGC | 4 cut(s) | 405, 1765, 1930, 3537 |
| CfoI | GCGC | 3 cut(s) | 20, 1111, 3792 |
| Cfr10I | RCCGGY | 1 cut(s) | 751 |
| Cfr13I | GGNCC | 8 cut(s) | 80, 200, 209, 860, 1574, 2402, 2600, 2762 |
| ClaI | ATCGAT | 2 cut(s) | 124, 2154 |
| CseI | GACGC | 1 cut(s) | 2547 |
| CsiI | ACCWGGT | 1 cut(s) | 2688 |
| Csp6I | GTAC | 8 cut(s) | 97, 174, 749, 939, 2074, 2438, 3312, 3630 |
| CspAI | ACCGGT | 1 cut(s) | 751 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2380, 2415 |
| CviQI | GTAC | 8 cut(s) | 97, 174, 749, 939, 2074, 2438, 3312, 3630 |
| DinI | GGCGCC | 1 cut(s) | 19 |
| DraI | TTTAAA | 4 cut(s) | 370, 699, 2265, 3700 |
| EaeI | YGGCCR | 2 cut(s) | 3328, 3753 |
| Eam1104I | CTCTTC | 5 cut(s) | 320, 533, 759, 2094, 3290 |
| EarI | CTCTTC | 5 cut(s) | 320, 533, 759, 2094, 3290 |
| Ecl136II | GAGCTC | 3 cut(s) | 105, 161, 453 |
| Eco130I | CCWWGG | 3 cut(s) | 83, 1015, 1203 |
| Eco24I | GRGCYC | 4 cut(s) | 107, 163, 455, 1382 |
| Eco31I | GGTCTC | 3 cut(s) | 936, 1823, 1988 |
| Eco32I | GATATC | 2 cut(s) | 128, 1656 |
| Eco47I | GGWCC | 6 cut(s) | 200, 209, 860, 1574, 2402, 2600 |
| Eco53kI | GAGCTC | 3 cut(s) | 105, 161, 453 |
| Eco88I | CYCGRG | 1 cut(s) | 448 |
| Eco91I | GGTNACC | 1 cut(s) | 1631 |
| EcoICRI | GAGCTC | 3 cut(s) | 105, 161, 453 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1373 |
| EcoO109I | RGGNCCY | 2 cut(s) | 200, 209 |
| EcoO65I | GGTNACC | 1 cut(s) | 1631 |
| EcoRI | GAATTC | 3 cut(s) | 2850, 3300, 3347 |
| EcoRII | CCWGG | 4 cut(s) | 862, 2354, 2688, 3277 |
| EcoRV | GATATC | 2 cut(s) | 128, 1656 |
| EcoT14I | CCWWGG | 3 cut(s) | 83, 1015, 1203 |
| EcoT22I | ATGCAT | 4 cut(s) | 1554, 1852, 2017, 3693 |
| EcoT38I | GRGCYC | 4 cut(s) | 107, 163, 455, 1382 |
| EgeI | GGCGCC | 1 cut(s) | 19 |
| EheI | GGCGCC | 1 cut(s) | 19 |
| ErhI | CCWWGG | 3 cut(s) | 83, 1015, 1203 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 281, 313, 3078, 3110 |
| FaqI | GGGAC | 2 cut(s) | 101, 3779 |
| FauI | CCCGC | 1 cut(s) | 311 |
| FauNDI | CATATG | 1 cut(s) | 2382 |
| FbaI | TGATCA | 4 cut(s) | 1621, 1681, 1819, 1984 |
| FblI | GTMKAC | 3 cut(s) | 2303, 2351, 2991 |
| Fnu4HI | GCNGC | 8 cut(s) | 21, 408, 426, 888, 1229, 1791, 1956, 2289 |
| FokI | GGATG | 9 cut(s) | 562, 920, 1220, 1230, 1456, 1859, 2024, 2865, 2880 |
| FriOI | GRGCYC | 4 cut(s) | 107, 163, 455, 1382 |
| Fsp4HI | GCNGC | 8 cut(s) | 21, 408, 426, 888, 1229, 1791, 1956, 2289 |
| FspBI | CTAG | 6 cut(s) | 111, 471, 1383, 2843, 3165, 3536 |
| GlaI | GCGC | 3 cut(s) | 19, 1110, 3791 |
| GluI | GCNGC | 8 cut(s) | 21, 408, 426, 888, 1229, 1791, 1956, 2289 |
| GsuI | CTGGAG | 3 cut(s) | 121, 2527, 3778 |
| HaeII | RGCGCY | 1 cut(s) | 21 |
| HaeIII | GGCC | 5 cut(s) | 81, 2764, 2949, 3330, 3755 |
| HapII | CCGG | 7 cut(s) | 78, 252, 752, 884, 1247, 3053, 3762 |
| HgaI | GACGC | 1 cut(s) | 2547 |
| HhaI | GCGC | 3 cut(s) | 20, 1111, 3792 |
| Hin1I | GRCGYC | 1 cut(s) | 18 |
| Hin6I | GCGC | 3 cut(s) | 18, 1109, 3790 |
| HinP1I | GCGC | 3 cut(s) | 18, 1109, 3790 |
| HincII | GTYRAC | 3 cut(s) | 418, 2695, 2710 |
| HindII | GTYRAC | 3 cut(s) | 418, 2695, 2710 |
| HindIII | AAGCTT | 2 cut(s) | 633, 3677 |
| HpaI | GTTAAC | 1 cut(s) | 418 |
| HpaII | CCGG | 7 cut(s) | 78, 252, 752, 884, 1247, 3053, 3762 |
| HphI | GGTGA | 8 cut(s) | 46, 749, 1643, 2648, 3356, 3512, 3559, 3571 |
| HpyCH4III | ACNGT | 9 cut(s) | 1104, 1267, 1432, 1492, 1610, 2399, 2730, 3528, 3559 |
| HpyCH4IV | ACGT | 1 cut(s) | 1638 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 158, 303, 884 |
| HpySE526I | ACGT | 1 cut(s) | 1638 |
| Hsp92I | GRCGYC | 1 cut(s) | 18 |
| HspAI | GCGC | 3 cut(s) | 18, 1109, 3790 |
| KasI | GGCGCC | 1 cut(s) | 17 |
| Kpn2I | TCCGGA | 1 cut(s) | 1246 |
| KpnI | GGTACC | 1 cut(s) | 942 |
| Ksp22I | TGATCA | 4 cut(s) | 1621, 1681, 1819, 1984 |
| KspAI | GTTAAC | 1 cut(s) | 418 |
| Lsp1109I | GCAGC | 7 cut(s) | 419, 437, 899, 1215, 1777, 1942, 2275 |
| LweI | GCATC | 9 cut(s) | 982, 1522, 1539, 1837, 2002, 2858, 3279, 3466, 3700 |
| MabI | ACCWGGT | 1 cut(s) | 2688 |
| MaeI | CTAG | 6 cut(s) | 111, 471, 1383, 2843, 3165, 3536 |
| MaeII | ACGT | 1 cut(s) | 1638 |
| MaeIII | GTNAC | 5 cut(s) | 441, 1631, 3032, 3043, 3500 |
| MfeI | CAATTG | 1 cut(s) | 1578 |
| MflI | RGATCY | 3 cut(s) | 613, 3055, 3621 |
| MhlI | GDGCHC | 6 cut(s) | 107, 163, 455, 1382, 2912, 3235 |
| MlsI | TGGCCA | 1 cut(s) | 3755 |
| MluNI | TGGCCA | 1 cut(s) | 3755 |
| Mly113I | GGCGCC | 1 cut(s) | 18 |
| MlyI | GAGTC | 3 cut(s) | 2093, 2732, 3145 |
| MmeI | TCCRAC | 8 cut(s) | 563, 1123, 1548, 1610, 2515, 2992, 3163, 3502 |
| Mox20I | TGGCCA | 1 cut(s) | 3755 |
| Mph1103I | ATGCAT | 4 cut(s) | 1554, 1852, 2017, 3693 |
| MroI | TCCGGA | 1 cut(s) | 1246 |
| MroXI | GAANNNNTTC | 1 cut(s) | 3802 |
| MscI | TGGCCA | 1 cut(s) | 3755 |
| MslI | CAYNNNNRTG | 4 cut(s) | 896, 902, 1208, 2154 |
| Msp20I | TGGCCA | 1 cut(s) | 3755 |
| MspA1I | CMGCKG | 5 cut(s) | 1079, 1836, 2001, 2606, 3611 |
| MspI | CCGG | 7 cut(s) | 78, 252, 752, 884, 1247, 3053, 3762 |
| MspR9I | CCNGG | 6 cut(s) | 253, 864, 2356, 2690, 3279, 3763 |
| MunI | CAATTG | 1 cut(s) | 1578 |
| Mva1269I | GAATGC | 4 cut(s) | 1703, 2165, 2557, 2790 |
| MvaI | CCWGG | 4 cut(s) | 864, 2356, 2690, 3279 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 158, 303, 884 |
| NarI | GGCGCC | 1 cut(s) | 18 |
| NciI | CCSGG | 2 cut(s) | 253, 3763 |
| NcoI | CCATGG | 1 cut(s) | 1203 |
| NdeI | CATATG | 1 cut(s) | 2382 |
| NheI | GCTAGC | 1 cut(s) | 3535 |
| NlaIV | GGNNCC | 9 cut(s) | 19, 67, 201, 493, 940, 2601, 3003, 3685, 3748 |
| NmeAIII | GCCGAG | 1 cut(s) | 2790 |
| NmuCI | GTSAC | 3 cut(s) | 1631, 3032, 3500 |
| NsiI | ATGCAT | 4 cut(s) | 1554, 1852, 2017, 3693 |
| NspI | RCATGY | 4 cut(s) | 901, 1854, 2019, 3383 |
| PaeR7I | CTCGAG | 1 cut(s) | 448 |
| PaqCI | CACCTGC | 1 cut(s) | 2461 |
| PciI | ACATGT | 2 cut(s) | 897, 3379 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 21 |
| PctI | GAATGC | 4 cut(s) | 1703, 2165, 2557, 2790 |
| PdmI | GAANNNNTTC | 1 cut(s) | 3802 |
| PflFI | GACNNNGTC | 1 cut(s) | 2299 |
| PfoI | TCCNGGA | 1 cut(s) | 862 |
| PinAI | ACCGGT | 1 cut(s) | 751 |
| PkrI | GCNGC | 8 cut(s) | 22, 409, 427, 889, 1230, 1792, 1957, 2290 |
| PleI | GAGTC | 3 cut(s) | 2092, 2732, 3144 |
| PluTI | GGCGCC | 1 cut(s) | 21 |
| PpsI | GAGTC | 3 cut(s) | 2092, 2732, 3144 |
| Ppu21I | YACGTR | 1 cut(s) | 1639 |
| PpuMI | RGGWCCY | 2 cut(s) | 200, 209 |
| PscI | ACATGT | 2 cut(s) | 897, 3379 |
| Psp124BI | GAGCTC | 3 cut(s) | 107, 163, 455 |
| Psp5II | RGGWCCY | 2 cut(s) | 200, 209 |
| Psp6I | CCWGG | 4 cut(s) | 862, 2354, 2688, 3277 |
| PspEI | GGTNACC | 1 cut(s) | 1631 |
| PspGI | CCWGG | 4 cut(s) | 862, 2354, 2688, 3277 |
| PspN4I | GGNNCC | 9 cut(s) | 19, 67, 201, 493, 940, 2601, 3003, 3685, 3748 |
| PspPI | GGNCC | 8 cut(s) | 80, 200, 209, 860, 1574, 2402, 2600, 2762 |
| PspPPI | RGGWCCY | 2 cut(s) | 200, 209 |
| PspXI | VCTCGAGB | 1 cut(s) | 448 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 699, 731 |
| PstI | CTGCAG | 2 cut(s) | 2209, 2472 |
| PsuI | RGATCY | 3 cut(s) | 613, 3055, 3621 |
| PsyI | GACNNNGTC | 1 cut(s) | 2299 |
| PvuII | CAGCTG | 1 cut(s) | 2606 |
| RsaI | GTAC | 8 cut(s) | 98, 175, 750, 940, 2075, 2439, 3313, 3631 |
| RsaNI | GTAC | 8 cut(s) | 97, 174, 749, 939, 2074, 2438, 3312, 3630 |
| RseI | CAYNNNNRTG | 4 cut(s) | 896, 902, 1208, 2154 |
| SacI | GAGCTC | 3 cut(s) | 107, 163, 455 |
| SatI | GCNGC | 8 cut(s) | 21, 408, 426, 888, 1229, 1791, 1956, 2289 |
| Sau96I | GGNCC | 8 cut(s) | 80, 200, 209, 860, 1574, 2402, 2600, 2762 |
| ScaI | AGTACT | 1 cut(s) | 98 |
| SchI | GAGTC | 3 cut(s) | 2093, 2732, 3145 |
| ScrFI | CCNGG | 6 cut(s) | 253, 864, 2356, 2690, 3279, 3763 |
| SduI | GDGCHC | 6 cut(s) | 107, 163, 455, 1382, 2912, 3235 |
| SexAI | ACCWGGT | 1 cut(s) | 2688 |
| SfaNI | GCATC | 9 cut(s) | 982, 1522, 1539, 1837, 2002, 2858, 3279, 3466, 3700 |
| SfcI | CTRYAG | 3 cut(s) | 2205, 2468, 2726 |
| SfoI | GGCGCC | 1 cut(s) | 19 |
| Sfr274I | CTCGAG | 1 cut(s) | 448 |
| SinI | GGWCC | 6 cut(s) | 200, 209, 860, 1574, 2402, 2600 |
| SlaI | CTCGAG | 1 cut(s) | 448 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 896, 902, 1208, 2154 |
| SmlI | CTYRAG | 4 cut(s) | 448, 2081, 2331, 2855 |
| SmoI | CTYRAG | 4 cut(s) | 448, 2081, 2331, 2855 |
| SsiI | CCGC | 8 cut(s) | 21, 304, 1079, 1169, 1836, 2001, 3609, 3708 |
| SspDI | GGCGCC | 1 cut(s) | 17 |
| SspI | AATATT | 2 cut(s) | 1294, 3803 |
| SspMI | CTAG | 6 cut(s) | 111, 471, 1383, 2843, 3165, 3536 |
| SstI | GAGCTC | 3 cut(s) | 107, 163, 455 |
| StyD4I | CCNGG | 6 cut(s) | 251, 862, 2354, 2688, 3277, 3761 |
| StyI | CCWWGG | 3 cut(s) | 83, 1015, 1203 |
| TaaI | ACNGT | 9 cut(s) | 1104, 1267, 1432, 1492, 1610, 2399, 2730, 3528, 3559 |
| TaiI | ACGT | 1 cut(s) | 1641 |
| TaqI | TCGA | 7 cut(s) | 124, 157, 221, 449, 2154, 2567, 3407 |
| TatI | WGTACW | 4 cut(s) | 96, 173, 2073, 3311 |
| TauI | GCSGC | 1 cut(s) | 23 |
| TscAI | CASTG | 6 cut(s) | 729, 1270, 1437, 1468, 2404, 2904 |
| TseFI | GTSAC | 3 cut(s) | 1631, 3032, 3500 |
| TseI | GCWGC | 7 cut(s) | 407, 425, 887, 1228, 1790, 1955, 2288 |
| Tsp45I | GTSAC | 3 cut(s) | 1631, 3032, 3500 |
| TspGWI | ACGGA | 5 cut(s) | 120, 435, 1845, 2010, 2153 |
| TspRI | CASTG | 6 cut(s) | 729, 1270, 1437, 1468, 2404, 2904 |
| Tth111I | GACNNNGTC | 1 cut(s) | 2299 |
| VneI | GTGCAC | 1 cut(s) | 3231 |
| VpaK11BI | GGWCC | 6 cut(s) | 200, 209, 860, 1574, 2402, 2600 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1373 |
| XapI | RAATTY | 6 cut(s) | 189, 281, 2257, 2850, 3300, 3347 |
| XbaI | TCTAGA | 1 cut(s) | 470 |
| XceI | RCATGY | 4 cut(s) | 901, 1854, 2019, 3383 |
| XcmI | CCANNNNNNNNNTGG | 4 cut(s) | 270, 3092, 3338, 3525 |
| XhoI | CTCGAG | 1 cut(s) | 448 |
| XmiI | GTMKAC | 3 cut(s) | 2303, 2351, 2991 |
| XmnI | GAANNNNTTC | 1 cut(s) | 3802 |
| XspI | CTAG | 6 cut(s) | 111, 471, 1383, 2843, 3165, 3536 |
| ZrmI | AGTACT | 1 cut(s) | 98 |
| Zsp2I | ATGCAT | 4 cut(s) | 1554, 1852, 2017, 3693 |