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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G26330 AT1G26330 |
| fragaria_vesca | FvH4_4g29660 FvH4_4g29660 FvH4_4g29660 FvH4_4g29660 FvH4_4g29660 FvH4_4g29660 FvH4_4g29660 FvH4_4g29660 FvH4_4g29660 FvH4_4g29660 FvH4_4g29660 FvH4_4g29660 FvH4_4g29660 FvH4_7g33791 |
| malus_domestica | MD16G1059100.v1.1 |
| prunus_persica | Prupe.1G290000_v2.0.a1 |
| pyrus_communis | pycom16g05150 |
| rosa_chinensis | RchiOBHm_Chr4g0437911 |
| rosa_laevigata | RLG00000006401 |
| rosa_multiflora | Rmu_sc0008907.1_g000008 |
| rosa_roxburghii | Rroxscaffold_5G00379080 |
| rosa_rugosa | Rorug04G0305500 Rorug04G0305600 |
| rosa_samantha | Rh4AG357200 Rh4BG368100 Rh4CG382100 Rh4DG362900 Rh7CG239700 |
| rosa_wichuraiana | Rw0G011550 Rw0G016120 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 2013 |
| AasI | GACNNNNNNGTC | 2 cut(s) | 1931, 3788 |
| Acc36I | ACCTGC | 2 cut(s) | 757, 1186 |
| AccB1I | GGYRCC | 2 cut(s) | 1387, 2708 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 1796, 3092 |
| AccBSI | CCGCTC | 1 cut(s) | 47 |
| AccI | GTMKAC | 3 cut(s) | 1844, 3366, 3995 |
| AciI | CCGC | 5 cut(s) | 47, 50, 173, 1673, 4050 |
| AclI | AACGTT | 1 cut(s) | 3623 |
| AclWI | GGATC | 5 cut(s) | 2855, 3168, 3920, 3933, 3974 |
| AcoI | YGGCCR | 5 cut(s) | 1644, 3028, 3562, 3757, 4098 |
| AcsI | RAATTY | 9 cut(s) | 302, 314, 586, 1737, 2195, 2314, 2909, 3159, 3581 |
| AcvI | CACGTG | 1 cut(s) | 2759 |
| AcyI | GRCGYC | 1 cut(s) | 810 |
| AdeI | CACNNNGTG | 1 cut(s) | 2225 |
| AflIII | ACRYGT | 3 cut(s) | 2758, 3275, 3749 |
| AhdI | GACNNNNNGTC | 3 cut(s) | 2893, 3838, 4084 |
| AhlI | ACTAGT | 2 cut(s) | 2923, 3977 |
| AjiI | CACGTC | 1 cut(s) | 575 |
| AjnI | CCWGG | 3 cut(s) | 1086, 2411, 3511 |
| AjuI | GAANNNNNNNTTGG | 6 cut(s) | 1588, 1620, 2586, 2618, 3312, 3344 |
| Alw21I | GWGCWC | 7 cut(s) | 128, 184, 197, 1456, 1789, 2446, 3469 |
| Alw44I | GTGCAC | 1 cut(s) | 3465 |
| AlwI | GGATC | 5 cut(s) | 2855, 3168, 3920, 3933, 3974 |
| Ama87I | CYCGRG | 3 cut(s) | 132, 2807, 4081 |
| AoxI | GGCC | 8 cut(s) | 486, 1021, 1644, 3028, 3131, 3562, 3757, 4098 |
| ApaLI | GTGCAC | 1 cut(s) | 3465 |
| ApeKI | GCWGC | 3 cut(s) | 428, 1811, 3935 |
| ApoI | RAATTY | 9 cut(s) | 302, 314, 586, 1737, 2195, 2314, 2909, 3159, 3581 |
| AseI | ATTAAT | 2 cut(s) | 1614, 1773 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 596 |
| AspS9I | GGNCC | 7 cut(s) | 101, 221, 230, 486, 2657, 3083, 3132 |
| AsuC2I | CCSGG | 3 cut(s) | 133, 134, 325 |
| AsuHPI | GGTGA | 8 cut(s) | 534, 1564, 1922, 1934, 2492, 3590, 3857, 3904 |
| AsuII | TTCGAA | 2 cut(s) | 590, 2396 |
| AsuNHI | GCTAGC | 1 cut(s) | 608 |
| AvaI | CYCGRG | 3 cut(s) | 132, 2807, 4081 |
| AvaII | GGWCC | 5 cut(s) | 101, 221, 230, 2657, 3083 |
| BaeGI | GKGCMC | 2 cut(s) | 3469, 3695 |
| BalI | TGGCCA | 4 cut(s) | 1646, 3030, 3564, 3759 |
| BamHI | GGATCC | 1 cut(s) | 3925 |
| BanI | GGYRCC | 2 cut(s) | 1387, 2708 |
| BanII | GRGCYC | 2 cut(s) | 128, 184 |
| BauI | CACGAG | 1 cut(s) | 3614 |
| BbrPI | CACGTG | 1 cut(s) | 2759 |
| BbsI | GAAGAC | 2 cut(s) | 852, 3786 |
| Bbv12I | GWGCWC | 7 cut(s) | 128, 184, 197, 1456, 1789, 2446, 3469 |
| BbvCI | CCTCAGC | 2 cut(s) | 651, 1827 |
| BbvI | GCAGC | 3 cut(s) | 440, 1798, 3922 |
| BceAI | ACGGC | 2 cut(s) | 4063, 4085 |
| BciT130I | CCWGG | 3 cut(s) | 1088, 2413, 3513 |
| BciVI | GTATCC | 2 cut(s) | 159, 165 |
| BclI | TGATCA | 3 cut(s) | 838, 1912, 2056 |
| BcnI | CCSGG | 3 cut(s) | 133, 134, 325 |
| BcuI | ACTAGT | 2 cut(s) | 2923, 3977 |
| BfaI | CTAG | 4 cut(s) | 609, 962, 2924, 3978 |
| BfmI | CTRYAG | 5 cut(s) | 447, 645, 984, 1338, 3241 |
| BfuAI | ACCTGC | 2 cut(s) | 757, 1186 |
| BfuI | GTATCC | 2 cut(s) | 159, 165 |
| BisI | GCNGC | 5 cut(s) | 48, 429, 1812, 3936, 4051 |
| BlsI | GCNGC | 5 cut(s) | 49, 430, 1813, 3937, 4052 |
| BmcAI | AGTACT | 1 cut(s) | 119 |
| Bme1390I | CCNGG | 6 cut(s) | 133, 134, 325, 1088, 2413, 3513 |
| Bme18I | GGWCC | 5 cut(s) | 101, 221, 230, 2657, 3083 |
| BmeRI | GACNNNNNGTC | 3 cut(s) | 2893, 3838, 4084 |
| BmeT110I | CYCGRG | 3 cut(s) | 132, 2807, 4081 |
| BmgBI | CACGTC | 1 cut(s) | 575 |
| BmgT120I | GGNCC | 7 cut(s) | 101, 221, 230, 486, 2657, 3083, 3132 |
| BmiI | GGNNCC | 7 cut(s) | 88, 1389, 2658, 2659, 2710, 3084, 3927 |
| BmrFI | CCNGG | 6 cut(s) | 133, 134, 325, 1088, 2413, 3513 |
| BmrI | ACTGGG | 4 cut(s) | 33, 897, 2109, 3857 |
| BmtI | GCTAGC | 1 cut(s) | 612 |
| BmuI | ACTGGG | 4 cut(s) | 33, 897, 2109, 3857 |
| BpiI | GAAGAC | 2 cut(s) | 852, 3786 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 3868, 3900 |
| BpmI | CTGGAG | 4 cut(s) | 142, 1017, 2736, 3177 |
| Bpu10I | CCTNAGC | 2 cut(s) | 651, 1827 |
| Bpu14I | TTCGAA | 2 cut(s) | 590, 2396 |
| BpuEI | CTTGAG | 7 cut(s) | 924, 1353, 1746, 2084, 2129, 2957, 3713 |
| BpuMI | CCSGG | 3 cut(s) | 133, 134, 325 |
| BsaAI | YACGTR | 2 cut(s) | 2759, 3999 |
| BsaBI | GATNNNNATC | 7 cut(s) | 147, 837, 948, 2058, 2849, 3074, 4035 |
| BsaHI | GRCGYC | 1 cut(s) | 810 |
| BsaI | GGTCTC | 3 cut(s) | 942, 1371, 2142 |
| BsaJI | CCNNGG | 6 cut(s) | 104, 132, 133, 323, 3511, 3768 |
| BsaWI | WCCGGW | 3 cut(s) | 98, 157, 3842 |
| BsaXI | ACNNNNNCTCC | 5 cut(s) | 25, 110, 140, 1771, 1801 |
| Bse3DI | GCAATG | 1 cut(s) | 1809 |
| Bse8I | GATNNNNATC | 7 cut(s) | 147, 837, 948, 2058, 2849, 3074, 4035 |
| BseBI | CCWGG | 3 cut(s) | 1088, 2413, 3513 |
| BseDI | CCNNGG | 6 cut(s) | 104, 132, 133, 323, 3511, 3768 |
| BseJI | GATNNNNATC | 7 cut(s) | 147, 837, 948, 2058, 2849, 3074, 4035 |
| BseMI | GCAATG | 1 cut(s) | 1809 |
| BseMII | CTCAG | 7 cut(s) | 642, 838, 1267, 1818, 2466, 2846, 3306 |
| BseRI | GAGGAG | 4 cut(s) | 118, 2148, 2795, 3311 |
| BseSI | GKGCMC | 2 cut(s) | 3469, 3695 |
| BseXI | GCAGC | 3 cut(s) | 440, 1798, 3922 |
| BshFI | GGCC | 8 cut(s) | 488, 1023, 1646, 3030, 3133, 3564, 3759, 4100 |
| BshNI | GGYRCC | 2 cut(s) | 1387, 2708 |
| BsiHKAI | GWGCWC | 7 cut(s) | 128, 184, 197, 1456, 1789, 2446, 3469 |
| BsiHKCI | CYCGRG | 3 cut(s) | 132, 2807, 4081 |
| BsiSI | CCGG | 7 cut(s) | 24, 99, 133, 158, 325, 3702, 3843 |
| BslFI | GGGAC | 5 cut(s) | 122, 2622, 2643, 3013, 3096 |
| BsmBI | CGTCTC | 2 cut(s) | 565, 817 |
| BsmFI | GGGAC | 5 cut(s) | 122, 2622, 2643, 3013, 3096 |
| BsmI | GAATGC | 2 cut(s) | 700, 2632 |
| BsnI | GGCC | 8 cut(s) | 488, 1023, 1646, 3030, 3133, 3564, 3759, 4100 |
| Bso31I | GGTCTC | 3 cut(s) | 942, 1371, 2142 |
| BsoBI | CYCGRG | 3 cut(s) | 132, 2807, 4081 |
| Bsp119I | TTCGAA | 2 cut(s) | 590, 2396 |
| Bsp1286I | GDGCHC | 8 cut(s) | 128, 184, 197, 1456, 1789, 2446, 3469, 3695 |
| Bsp1407I | TGTACA | 1 cut(s) | 2150 |
| BspACI | CCGC | 5 cut(s) | 47, 50, 173, 1673, 4050 |
| BspANI | GGCC | 8 cut(s) | 488, 1023, 1646, 3030, 3133, 3564, 3759, 4100 |
| BspCNI | CTCAG | 7 cut(s) | 643, 837, 1266, 1819, 2465, 2845, 3305 |
| BspHI | TCATGA | 2 cut(s) | 841, 2857 |
| BspLI | GGNNCC | 7 cut(s) | 88, 1389, 2658, 2659, 2710, 3084, 3927 |
| BspMAI | CTGCAG | 2 cut(s) | 451, 3245 |
| BspMI | ACCTGC | 2 cut(s) | 757, 1186 |
| BspOI | GCTAGC | 1 cut(s) | 612 |
| BspPI | GGATC | 5 cut(s) | 2855, 3168, 3920, 3933, 3974 |
| BspT104I | TTCGAA | 2 cut(s) | 590, 2396 |
| BspT107I | GGYRCC | 2 cut(s) | 1387, 2708 |
| BspTNI | GGTCTC | 3 cut(s) | 942, 1371, 2142 |
| BsrBI | CCGCTC | 1 cut(s) | 47 |
| BsrDI | GCAATG | 1 cut(s) | 1809 |
| BsrGI | TGTACA | 1 cut(s) | 2150 |
| BssECI | CCNNGG | 6 cut(s) | 104, 132, 133, 323, 3511, 3768 |
| BssNAI | GTATAC | 2 cut(s) | 1845, 3996 |
| BssNI | GRCGYC | 1 cut(s) | 810 |
| BssSI | CACGAG | 1 cut(s) | 3614 |
| BssT1I | CCWWGG | 2 cut(s) | 104, 3768 |
| Bst1107I | GTATAC | 2 cut(s) | 1845, 3996 |
| Bst2BI | CACGAG | 1 cut(s) | 3614 |
| Bst2UI | CCWGG | 3 cut(s) | 1088, 2413, 3513 |
| Bst6I | CTCTTC | 6 cut(s) | 341, 665, 756, 960, 1185, 3524 |
| BstACI | GRCGYC | 1 cut(s) | 810 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 1808, 3739 |
| BstAUI | TGTACA | 1 cut(s) | 2150 |
| BstBAI | YACGTR | 2 cut(s) | 2759, 3999 |
| BstBI | TTCGAA | 2 cut(s) | 590, 2396 |
| BstEII | GGTNACC | 1 cut(s) | 1922 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 179, 647, 1750, 1808, 3739 |
| BstNI | CCWGG | 3 cut(s) | 1088, 2413, 3513 |
| BstNSI | RCATGY | 5 cut(s) | 1998, 2311, 3279, 3753, 4135 |
| BstPI | GGTNACC | 1 cut(s) | 1922 |
| BstSCI | CCNGG | 6 cut(s) | 131, 132, 323, 1086, 2411, 3511 |
| BstSFI | CTRYAG | 5 cut(s) | 447, 645, 984, 1338, 3241 |
| BstSLI | GKGCMC | 2 cut(s) | 3469, 3695 |
| BstV1I | GCAGC | 3 cut(s) | 440, 1798, 3922 |
| BstV2I | GAAGAC | 2 cut(s) | 852, 3786 |
| BstX2I | RGATCY | 3 cut(s) | 3173, 3925, 3966 |
| BstYI | RGATCY | 3 cut(s) | 3173, 3925, 3966 |
| BstZ17I | GTATAC | 2 cut(s) | 1845, 3996 |
| BsuI | GTATCC | 2 cut(s) | 159, 165 |
| BsuRI | GGCC | 8 cut(s) | 488, 1023, 1646, 3030, 3133, 3564, 3759, 4100 |
| BtgZI | GCGATG | 1 cut(s) | 3217 |
| BtrI | CACGTC | 1 cut(s) | 575 |
| BveI | ACCTGC | 2 cut(s) | 757, 1186 |
| CciI | TCATGA | 2 cut(s) | 841, 2857 |
| Cfr13I | GGNCC | 7 cut(s) | 101, 221, 230, 486, 2657, 3083, 3132 |
| Cfr9I | CCCGGG | 1 cut(s) | 132 |
| CseI | GACGC | 2 cut(s) | 799, 1592 |
| DraIII | CACNNNGTG | 1 cut(s) | 2225 |
| DrdI | GACNNNNNNGTC | 2 cut(s) | 1931, 3788 |
| DriI | GACNNNNNGTC | 3 cut(s) | 2893, 3838, 4084 |
| DseDI | GACNNNNNNGTC | 2 cut(s) | 1931, 3788 |
| EaeI | YGGCCR | 5 cut(s) | 1644, 3028, 3562, 3757, 4098 |
| Eam1104I | CTCTTC | 6 cut(s) | 341, 665, 756, 960, 1185, 3524 |
| Eam1105I | GACNNNNNGTC | 3 cut(s) | 2893, 3838, 4084 |
| EarI | CTCTTC | 6 cut(s) | 341, 665, 756, 960, 1185, 3524 |
| EciI | GGCGGA | 1 cut(s) | 65 |
| Ecl136II | GAGCTC | 2 cut(s) | 126, 182 |
| Eco130I | CCWWGG | 2 cut(s) | 104, 3768 |
| Eco24I | GRGCYC | 2 cut(s) | 128, 184 |
| Eco31I | GGTCTC | 3 cut(s) | 942, 1371, 2142 |
| Eco32I | GATATC | 2 cut(s) | 677, 2649 |
| Eco47I | GGWCC | 5 cut(s) | 101, 221, 230, 2657, 3083 |
| Eco53kI | GAGCTC | 2 cut(s) | 126, 182 |
| Eco72I | CACGTG | 1 cut(s) | 2759 |
| Eco88I | CYCGRG | 3 cut(s) | 132, 2807, 4081 |
| Eco91I | GGTNACC | 1 cut(s) | 1922 |
| EcoICRI | GAGCTC | 2 cut(s) | 126, 182 |
| EcoO109I | RGGNCCY | 4 cut(s) | 221, 230, 486, 2657 |
| EcoO65I | GGTNACC | 1 cut(s) | 1922 |
| EcoRI | GAATTC | 2 cut(s) | 2314, 3581 |
| EcoRII | CCWGG | 3 cut(s) | 1086, 2411, 3511 |
| EcoRV | GATATC | 2 cut(s) | 677, 2649 |
| EcoT14I | CCWWGG | 2 cut(s) | 104, 3768 |
| EcoT22I | ATGCAT | 2 cut(s) | 1996, 4038 |
| EcoT38I | GRGCYC | 2 cut(s) | 128, 184 |
| ErhI | CCWWGG | 2 cut(s) | 104, 3768 |
| Esp3I | CGTCTC | 2 cut(s) | 565, 817 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1269, 1301, 3312, 3344 |
| FaqI | GGGAC | 5 cut(s) | 122, 2622, 2643, 3013, 3096 |
| FbaI | TGATCA | 3 cut(s) | 838, 1912, 2056 |
| FblI | GTMKAC | 3 cut(s) | 1844, 3366, 3995 |
| Fnu4HI | GCNGC | 5 cut(s) | 48, 429, 1812, 3936, 4051 |
| FriOI | GRGCYC | 2 cut(s) | 128, 184 |
| Fsp4HI | GCNGC | 5 cut(s) | 48, 429, 1812, 3936, 4051 |
| FspBI | CTAG | 4 cut(s) | 609, 962, 2924, 3978 |
| GluI | GCNGC | 5 cut(s) | 48, 429, 1812, 3936, 4051 |
| GsuI | CTGGAG | 4 cut(s) | 142, 1017, 2736, 3177 |
| HaeIII | GGCC | 8 cut(s) | 488, 1023, 1646, 3030, 3133, 3564, 3759, 4100 |
| HapII | CCGG | 7 cut(s) | 24, 99, 133, 158, 325, 3702, 3843 |
| HgaI | GACGC | 2 cut(s) | 799, 1592 |
| Hin1I | GRCGYC | 1 cut(s) | 810 |
| HincII | GTYRAC | 4 cut(s) | 1936, 2776, 3040, 3621 |
| HindII | GTYRAC | 4 cut(s) | 1936, 2776, 3040, 3621 |
| HpaII | CCGG | 7 cut(s) | 24, 99, 133, 158, 325, 3702, 3843 |
| HphI | GGTGA | 8 cut(s) | 534, 1564, 1922, 1934, 2492, 3590, 3857, 3904 |
| HpyCH4IV | ACGT | 6 cut(s) | 574, 2758, 3012, 3281, 3623, 3998 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 179, 647, 1750, 1808, 3739 |
| HpySE526I | ACGT | 6 cut(s) | 574, 2758, 3012, 3281, 3623, 3998 |
| Hsp92I | GRCGYC | 1 cut(s) | 810 |
| KflI | GGGWCCC | 1 cut(s) | 2657 |
| Ksp22I | TGATCA | 3 cut(s) | 838, 1912, 2056 |
| Lsp1109I | GCAGC | 3 cut(s) | 440, 1798, 3922 |
| MaeI | CTAG | 4 cut(s) | 609, 962, 2924, 3978 |
| MaeII | ACGT | 6 cut(s) | 574, 2758, 3012, 3281, 3623, 3998 |
| MbiI | CCGCTC | 1 cut(s) | 47 |
| MfeI | CAATTG | 2 cut(s) | 1869, 3259 |
| MflI | RGATCY | 3 cut(s) | 3173, 3925, 3966 |
| MhlI | GDGCHC | 8 cut(s) | 128, 184, 197, 1456, 1789, 2446, 3469, 3695 |
| MlsI | TGGCCA | 4 cut(s) | 1646, 3030, 3564, 3759 |
| MluNI | TGGCCA | 4 cut(s) | 1646, 3030, 3564, 3759 |
| MlyI | GAGTC | 4 cut(s) | 2178, 2387, 2882, 4073 |
| MmeI | TCCRAC | 5 cut(s) | 1103, 1612, 2511, 3073, 3397 |
| Mox20I | TGGCCA | 4 cut(s) | 1646, 3030, 3564, 3759 |
| Mph1103I | ATGCAT | 2 cut(s) | 1996, 4038 |
| MroXI | GAANNNNTTC | 1 cut(s) | 596 |
| MscI | TGGCCA | 4 cut(s) | 1646, 3030, 3564, 3759 |
| MslI | CAYNNNNRTG | 2 cut(s) | 684, 3614 |
| Msp20I | TGGCCA | 4 cut(s) | 1646, 3030, 3564, 3759 |
| MspA1I | CMGCKG | 1 cut(s) | 3494 |
| MspI | CCGG | 7 cut(s) | 24, 99, 133, 158, 325, 3702, 3843 |
| MspR9I | CCNGG | 6 cut(s) | 133, 134, 325, 1088, 2413, 3513 |
| MunI | CAATTG | 2 cut(s) | 1869, 3259 |
| Mva1269I | GAATGC | 2 cut(s) | 700, 2632 |
| MvaI | CCWGG | 3 cut(s) | 1088, 2413, 3513 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 179, 647, 1750, 1808, 3739 |
| NciI | CCSGG | 3 cut(s) | 133, 134, 325 |
| NheI | GCTAGC | 1 cut(s) | 608 |
| NlaIV | GGNNCC | 7 cut(s) | 88, 1389, 2658, 2659, 2710, 3084, 3927 |
| NmuCI | GTSAC | 6 cut(s) | 1358, 1552, 1922, 2117, 3113, 4109 |
| NsiI | ATGCAT | 2 cut(s) | 1996, 4038 |
| NspI | RCATGY | 5 cut(s) | 1998, 2311, 3279, 3753, 4135 |
| NspV | TTCGAA | 2 cut(s) | 590, 2396 |
| PaeI | GCATGC | 1 cut(s) | 1998 |
| PaeR7I | CTCGAG | 2 cut(s) | 2807, 4081 |
| PagI | TCATGA | 2 cut(s) | 841, 2857 |
| PciI | ACATGT | 2 cut(s) | 3275, 3749 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 11 |
| PctI | GAATGC | 2 cut(s) | 700, 2632 |
| PdmI | GAANNNNTTC | 1 cut(s) | 596 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 1796, 3092 |
| PfoI | TCCNGGA | 1 cut(s) | 1086 |
| PkrI | GCNGC | 5 cut(s) | 49, 430, 1813, 3937, 4052 |
| PleI | GAGTC | 4 cut(s) | 2177, 2386, 2882, 4073 |
| PmaCI | CACGTG | 1 cut(s) | 2759 |
| PmlI | CACGTG | 1 cut(s) | 2759 |
| PpsI | GAGTC | 4 cut(s) | 2177, 2386, 2882, 4073 |
| Ppu21I | YACGTR | 2 cut(s) | 2759, 3999 |
| PpuMI | RGGWCCY | 3 cut(s) | 221, 230, 2657 |
| PscI | ACATGT | 2 cut(s) | 3275, 3749 |
| PshBI | ATTAAT | 2 cut(s) | 1614, 1773 |
| PsiI | TTATAA | 1 cut(s) | 2013 |
| Psp124BI | GAGCTC | 2 cut(s) | 128, 184 |
| Psp1406I | AACGTT | 1 cut(s) | 3623 |
| Psp5II | RGGWCCY | 3 cut(s) | 221, 230, 2657 |
| Psp6I | CCWGG | 3 cut(s) | 1086, 2411, 3511 |
| PspCI | CACGTG | 1 cut(s) | 2759 |
| PspEI | GGTNACC | 1 cut(s) | 1922 |
| PspGI | CCWGG | 3 cut(s) | 1086, 2411, 3511 |
| PspN4I | GGNNCC | 7 cut(s) | 88, 1389, 2658, 2659, 2710, 3084, 3927 |
| PspPI | GGNCC | 7 cut(s) | 101, 221, 230, 486, 2657, 3083, 3132 |
| PspPPI | RGGWCCY | 3 cut(s) | 221, 230, 2657 |
| PspXI | VCTCGAGB | 2 cut(s) | 2807, 4081 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 3247, 3279 |
| PstI | CTGCAG | 2 cut(s) | 451, 3245 |
| PsuI | RGATCY | 3 cut(s) | 3173, 3925, 3966 |
| PvuII | CAGCTG | 1 cut(s) | 3494 |
| RseI | CAYNNNNRTG | 2 cut(s) | 684, 3614 |
| SacI | GAGCTC | 2 cut(s) | 128, 184 |
| SatI | GCNGC | 5 cut(s) | 48, 429, 1812, 3936, 4051 |
| Sau96I | GGNCC | 7 cut(s) | 101, 221, 230, 486, 2657, 3083, 3132 |
| ScaI | AGTACT | 1 cut(s) | 119 |
| SchI | GAGTC | 4 cut(s) | 2178, 2387, 2882, 4073 |
| ScrFI | CCNGG | 6 cut(s) | 133, 134, 325, 1088, 2413, 3513 |
| SduI | GDGCHC | 8 cut(s) | 128, 184, 197, 1456, 1789, 2446, 3469, 3695 |
| SfcI | CTRYAG | 5 cut(s) | 447, 645, 984, 1338, 3241 |
| Sfr274I | CTCGAG | 2 cut(s) | 2807, 4081 |
| SfuI | TTCGAA | 2 cut(s) | 590, 2396 |
| SinI | GGWCC | 5 cut(s) | 101, 221, 230, 2657, 3083 |
| SlaI | CTCGAG | 2 cut(s) | 2807, 4081 |
| SmaI | CCCGGG | 1 cut(s) | 134 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 684, 3614 |
| SmlI | CTYRAG | 9 cut(s) | 939, 1368, 1761, 2063, 2108, 2807, 2936, 3728, 4081 |
| SmoI | CTYRAG | 9 cut(s) | 939, 1368, 1761, 2063, 2108, 2807, 2936, 3728, 4081 |
| SpeI | ACTAGT | 2 cut(s) | 2923, 3977 |
| SphI | GCATGC | 1 cut(s) | 1998 |
| SsiI | CCGC | 5 cut(s) | 47, 50, 173, 1673, 4050 |
| SspMI | CTAG | 4 cut(s) | 609, 962, 2924, 3978 |
| SstI | GAGCTC | 2 cut(s) | 128, 184 |
| StyD4I | CCNGG | 6 cut(s) | 131, 132, 323, 1086, 2411, 3511 |
| StyI | CCWWGG | 2 cut(s) | 104, 3768 |
| TaiI | ACGT | 6 cut(s) | 577, 2761, 3015, 3284, 3626, 4001 |
| TatI | WGTACW | 4 cut(s) | 117, 2150, 3545, 3917 |
| TauI | GCSGC | 2 cut(s) | 50, 4053 |
| TseFI | GTSAC | 6 cut(s) | 1358, 1552, 1922, 2117, 3113, 4109 |
| TseI | GCWGC | 3 cut(s) | 428, 1811, 3935 |
| Tsp45I | GTSAC | 6 cut(s) | 1358, 1552, 1922, 2117, 3113, 4109 |
| TspGWI | ACGGA | 3 cut(s) | 141, 2436, 3112 |
| TspMI | CCCGGG | 1 cut(s) | 132 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 1796, 3092 |
| VneI | GTGCAC | 1 cut(s) | 3465 |
| VpaK11BI | GGWCC | 5 cut(s) | 101, 221, 230, 2657, 3083 |
| VspI | ATTAAT | 2 cut(s) | 1614, 1773 |
| XapI | RAATTY | 9 cut(s) | 302, 314, 586, 1737, 2195, 2314, 2909, 3159, 3581 |
| XceI | RCATGY | 5 cut(s) | 1998, 2311, 3279, 3753, 4135 |
| XcmI | CCANNNNNNNNNTGG | 3 cut(s) | 291, 3572, 3870 |
| XhoI | CTCGAG | 2 cut(s) | 2807, 4081 |
| XmaI | CCCGGG | 1 cut(s) | 132 |
| XmiI | GTMKAC | 3 cut(s) | 1844, 3366, 3995 |
| XmnI | GAANNNNTTC | 1 cut(s) | 596 |
| XspI | CTAG | 4 cut(s) | 609, 962, 2924, 3978 |
| ZrmI | AGTACT | 1 cut(s) | 119 |
| Zsp2I | ATGCAT | 2 cut(s) | 1996, 4038 |