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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT1G26330 AT1G26330 |
| fragaria_vesca | FvH4_4g29660 FvH4_4g29660 FvH4_4g29660 FvH4_4g29660 FvH4_4g29660 FvH4_4g29660 FvH4_4g29660 FvH4_4g29660 FvH4_4g29660 FvH4_4g29660 FvH4_4g29660 FvH4_4g29660 FvH4_4g29660 FvH4_7g33791 |
| malus_domestica | MD16G1059100.v1.1 |
| prunus_persica | Prupe.1G290000_v2.0.a1 |
| pyrus_communis | pycom16g05150 |
| rosa_chinensis | RchiOBHm_Chr4g0437911 |
| rosa_laevigata | RLG00000006401 |
| rosa_multiflora | Rmu_sc0008907.1_g000008 |
| rosa_roxburghii | Rroxscaffold_5G00379080 |
| rosa_rugosa | Rorug04G0305500 Rorug04G0305600 |
| rosa_samantha | Rh4AG357200 Rh4BG368100 Rh4CG382100 Rh4DG362900 Rh7CG239700 |
| rosa_wichuraiana | Rw0G011550 Rw0G016120 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 2236 |
| Acc36I | ACCTGC | 1 cut(s) | 2236 |
| Acc65I | GGTACC | 2 cut(s) | 938, 3325 |
| AccB1I | GGYRCC | 5 cut(s) | 17, 938, 3325, 3722, 3785 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 1448 |
| AccBSI | CCGCTC | 1 cut(s) | 492 |
| AccI | GTMKAC | 4 cut(s) | 2078, 2126, 2766, 2875 |
| AccIII | TCCGGA | 1 cut(s) | 1219 |
| AciI | CCGC | 7 cut(s) | 21, 304, 490, 1079, 1776, 3648, 3747 |
| AclWI | GGATC | 6 cut(s) | 129, 1982, 2549, 2838, 2862, 3668 |
| AcoI | YGGCCR | 2 cut(s) | 3256, 3792 |
| AcsI | RAATTY | 7 cut(s) | 189, 281, 2032, 2625, 3228, 3275, 3382 |
| AcyI | GRCGYC | 1 cut(s) | 18 |
| AfaI | GTAC | 9 cut(s) | 98, 175, 750, 940, 1850, 2214, 3241, 3327, 3670 |
| AfiI | CCNNNNNNNGG | 7 cut(s) | 84, 114, 650, 1348, 1448, 2786, 3801 |
| AflIII | ACRYGT | 3 cut(s) | 897, 2969, 3418 |
| AgeI | ACCGGT | 1 cut(s) | 751 |
| AjnI | CCWGG | 5 cut(s) | 862, 1447, 2129, 2463, 3205 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 2769, 2801 |
| Alw21I | GWGCWC | 6 cut(s) | 107, 163, 455, 2687, 2966, 3163 |
| Alw26I | GTCTC | 8 cut(s) | 655, 936, 1763, 1866, 2188, 2213, 2452, 3118 |
| Alw44I | GTGCAC | 2 cut(s) | 2962, 3159 |
| AlwI | GGATC | 6 cut(s) | 129, 1982, 2549, 2838, 2862, 3668 |
| Ama87I | CYCGRG | 1 cut(s) | 448 |
| Aor13HI | TCCGGA | 1 cut(s) | 1219 |
| AoxI | GGCC | 5 cut(s) | 79, 2537, 2722, 3256, 3792 |
| ApaLI | GTGCAC | 2 cut(s) | 2962, 3159 |
| ApeKI | GCWGC | 8 cut(s) | 230, 407, 425, 887, 1201, 1730, 2063, 2982 |
| ApoI | RAATTY | 7 cut(s) | 189, 281, 2032, 2625, 3228, 3275, 3382 |
| AsiGI | ACCGGT | 1 cut(s) | 751 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 3841 |
| Asp718I | GGTACC | 2 cut(s) | 938, 3325 |
| AspLEI | GCGC | 3 cut(s) | 20, 1111, 3831 |
| AspS9I | GGNCC | 8 cut(s) | 80, 200, 209, 860, 1514, 2177, 2375, 2537 |
| AsuC2I | CCSGG | 2 cut(s) | 253, 3802 |
| AsuHPI | GGTGA | 7 cut(s) | 46, 1583, 2423, 3284, 3551, 3598, 3610 |
| AsuNHI | GCTAGC | 1 cut(s) | 3574 |
| AvaI | CYCGRG | 1 cut(s) | 448 |
| AvaII | GGWCC | 6 cut(s) | 200, 209, 860, 1514, 2177, 2375 |
| BaeGI | GKGCMC | 2 cut(s) | 2966, 3163 |
| BalI | TGGCCA | 1 cut(s) | 3794 |
| BanI | GGYRCC | 5 cut(s) | 17, 938, 3325, 3722, 3785 |
| BanII | GRGCYC | 4 cut(s) | 107, 163, 455, 1355 |
| BbsI | GAAGAC | 4 cut(s) | 526, 957, 1080, 3482 |
| Bbv12I | GWGCWC | 6 cut(s) | 107, 163, 455, 2687, 2966, 3163 |
| BbvI | GCAGC | 8 cut(s) | 217, 419, 437, 899, 1188, 1717, 2050, 2969 |
| BceAI | ACGGC | 3 cut(s) | 8, 31, 3773 |
| BciT130I | CCWGG | 5 cut(s) | 864, 1449, 2131, 2465, 3207 |
| BciVI | GTATCC | 4 cut(s) | 144, 631, 1388, 1591 |
| BclI | TGATCA | 3 cut(s) | 1561, 1621, 1759 |
| BcnI | CCSGG | 2 cut(s) | 253, 3802 |
| BcoDI | GTCTC | 8 cut(s) | 655, 936, 1763, 1866, 2188, 2213, 2452, 3118 |
| BfaI | CTAG | 7 cut(s) | 111, 471, 1356, 2618, 3093, 3396, 3575 |
| BfmI | CTRYAG | 4 cut(s) | 1980, 2243, 2501, 2935 |
| BfoI | RGCGCY | 1 cut(s) | 21 |
| BfuAI | ACCTGC | 1 cut(s) | 2236 |
| BfuI | GTATCC | 4 cut(s) | 144, 631, 1388, 1591 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 884 |
| BglII | AGATCT | 1 cut(s) | 613 |
| BisI | GCNGC | 9 cut(s) | 21, 231, 408, 426, 888, 1202, 1731, 2064, 2983 |
| BlsI | GCNGC | 9 cut(s) | 22, 232, 409, 427, 889, 1203, 1732, 2065, 2984 |
| BmcAI | AGTACT | 1 cut(s) | 98 |
| Bme1390I | CCNGG | 7 cut(s) | 253, 864, 1449, 2131, 2465, 3207, 3802 |
| Bme18I | GGWCC | 6 cut(s) | 200, 209, 860, 1514, 2177, 2375 |
| BmeT110I | CYCGRG | 1 cut(s) | 448 |
| BmgT120I | GGNCC | 8 cut(s) | 80, 200, 209, 860, 1514, 2177, 2375, 2537 |
| BmiI | GGNNCC | 9 cut(s) | 19, 67, 201, 940, 2376, 2778, 3327, 3724, 3787 |
| BmrFI | CCNGG | 7 cut(s) | 253, 864, 1449, 2131, 2465, 3207, 3802 |
| BmrI | ACTGGG | 3 cut(s) | 1833, 1934, 3129 |
| BmsI | GCATC | 9 cut(s) | 982, 1462, 1479, 1777, 2633, 3207, 3312, 3505, 3739 |
| BmtI | GCTAGC | 1 cut(s) | 3578 |
| BmuI | ACTGGG | 3 cut(s) | 1833, 1934, 3129 |
| BpiI | GAAGAC | 4 cut(s) | 526, 957, 1080, 3482 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 3562, 3594 |
| BpmI | CTGGAG | 3 cut(s) | 121, 2302, 3817 |
| BpuEI | CTTGAG | 3 cut(s) | 1877, 2091, 2651 |
| BpuMI | CCSGG | 2 cut(s) | 253, 3802 |
| Bsa29I | ATCGAT | 2 cut(s) | 124, 1929 |
| BsaAI | YACGTR | 1 cut(s) | 1579 |
| BsaBI | GATNNNNATC | 2 cut(s) | 126, 1560 |
| BsaHI | GRCGYC | 1 cut(s) | 18 |
| BsaI | GGTCTC | 2 cut(s) | 936, 1763 |
| BsaJI | CCNNGG | 7 cut(s) | 83, 1015, 1176, 1447, 3205, 3789, 3801 |
| BsaWI | WCCGGW | 2 cut(s) | 751, 1219 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 89, 119, 1423, 1453 |
| Bsc4I | CCNNNNNNNGG | 7 cut(s) | 84, 114, 650, 1348, 1448, 2786, 3801 |
| Bse118I | RCCGGY | 1 cut(s) | 751 |
| Bse3DI | GCAATG | 5 cut(s) | 466, 1188, 1432, 1687, 1714 |
| Bse8I | GATNNNNATC | 2 cut(s) | 126, 1560 |
| BseAI | TCCGGA | 1 cut(s) | 1219 |
| BseBI | CCWGG | 5 cut(s) | 864, 1449, 2131, 2465, 3207 |
| BseCI | ATCGAT | 2 cut(s) | 124, 1929 |
| BseDI | CCNNGG | 7 cut(s) | 83, 1015, 1176, 1447, 3205, 3789, 3801 |
| BseGI | GGATG | 9 cut(s) | 575, 913, 1186, 1216, 1442, 1792, 2648, 2653, 3303 |
| BseJI | GATNNNNATC | 2 cut(s) | 126, 1560 |
| BseLI | CCNNNNNNNGG | 7 cut(s) | 84, 114, 650, 1348, 1448, 2786, 3801 |
| BseMI | GCAATG | 5 cut(s) | 466, 1188, 1432, 1687, 1714 |
| BseMII | CTCAG | 6 cut(s) | 841, 947, 1427, 1969, 2208, 2979 |
| BseRI | GAGGAG | 3 cut(s) | 97, 1331, 3005 |
| BseSI | GKGCMC | 2 cut(s) | 2966, 3163 |
| BseXI | GCAGC | 8 cut(s) | 217, 419, 437, 899, 1188, 1717, 2050, 2969 |
| BshFI | GGCC | 5 cut(s) | 81, 2539, 2724, 3258, 3794 |
| BshNI | GGYRCC | 5 cut(s) | 17, 938, 3325, 3722, 3785 |
| BshTI | ACCGGT | 1 cut(s) | 751 |
| BshVI | ATCGAT | 2 cut(s) | 124, 1929 |
| BsiHKAI | GWGCWC | 6 cut(s) | 107, 163, 455, 2687, 2966, 3163 |
| BsiHKCI | CYCGRG | 1 cut(s) | 448 |
| BsiSI | CCGG | 7 cut(s) | 78, 252, 752, 884, 1220, 2828, 3801 |
| BslFI | GGGAC | 2 cut(s) | 101, 3818 |
| BslI | CCNNNNNNNGG | 7 cut(s) | 84, 114, 650, 1348, 1448, 2786, 3801 |
| BsmAI | GTCTC | 8 cut(s) | 655, 936, 1763, 1866, 2188, 2213, 2452, 3118 |
| BsmFI | GGGAC | 2 cut(s) | 101, 3818 |
| BsmI | GAATGC | 5 cut(s) | 1643, 1940, 2332, 2565, 3001 |
| BsnI | GGCC | 5 cut(s) | 81, 2539, 2724, 3258, 3794 |
| Bso31I | GGTCTC | 2 cut(s) | 936, 1763 |
| BsoBI | CYCGRG | 1 cut(s) | 448 |
| Bsp1286I | GDGCHC | 7 cut(s) | 107, 163, 455, 1355, 2687, 2966, 3163 |
| Bsp13I | TCCGGA | 1 cut(s) | 1219 |
| Bsp19I | CCATGG | 1 cut(s) | 1176 |
| BspACI | CCGC | 7 cut(s) | 21, 304, 490, 1079, 1776, 3648, 3747 |
| BspANI | GGCC | 5 cut(s) | 81, 2539, 2724, 3258, 3794 |
| BspCNI | CTCAG | 6 cut(s) | 840, 946, 1426, 1968, 2209, 2980 |
| BspDI | ATCGAT | 2 cut(s) | 124, 1929 |
| BspEI | TCCGGA | 1 cut(s) | 1219 |
| BspLI | GGNNCC | 9 cut(s) | 19, 67, 201, 940, 2376, 2778, 3327, 3724, 3787 |
| BspMAI | CTGCAG | 3 cut(s) | 1984, 2247, 2939 |
| BspMI | ACCTGC | 1 cut(s) | 2236 |
| BspOI | GCTAGC | 1 cut(s) | 3578 |
| BspPI | GGATC | 6 cut(s) | 129, 1982, 2549, 2838, 2862, 3668 |
| BspT107I | GGYRCC | 5 cut(s) | 17, 938, 3325, 3722, 3785 |
| BspTNI | GGTCTC | 2 cut(s) | 936, 1763 |
| BsrBI | CCGCTC | 1 cut(s) | 492 |
| BsrDI | GCAATG | 5 cut(s) | 466, 1188, 1432, 1687, 1714 |
| BsrFI | RCCGGY | 1 cut(s) | 751 |
| BssAI | RCCGGY | 1 cut(s) | 751 |
| BssECI | CCNNGG | 7 cut(s) | 83, 1015, 1176, 1447, 3205, 3789, 3801 |
| BssNAI | GTATAC | 1 cut(s) | 2127 |
| BssNI | GRCGYC | 1 cut(s) | 18 |
| BssT1I | CCWWGG | 3 cut(s) | 83, 1015, 1176 |
| Bst1107I | GTATAC | 1 cut(s) | 2127 |
| Bst2UI | CCWGG | 5 cut(s) | 864, 1449, 2131, 2465, 3207 |
| Bst6I | CTCTTC | 5 cut(s) | 320, 533, 759, 1869, 3218 |
| BstACI | GRCGYC | 1 cut(s) | 18 |
| BstBAI | YACGTR | 1 cut(s) | 1579 |
| BstC8I | GCNNGC | 4 cut(s) | 405, 1705, 2939, 3576 |
| BstDSI | CCRYGG | 2 cut(s) | 1176, 3789 |
| BstEII | GGTNACC | 1 cut(s) | 1571 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1346 |
| BstF5I | GGATG | 9 cut(s) | 575, 913, 1186, 1216, 1442, 1792, 2648, 2653, 3303 |
| BstH2I | RGCGCY | 1 cut(s) | 21 |
| BstHHI | GCGC | 3 cut(s) | 20, 1111, 3831 |
| BstMAI | GTCTC | 8 cut(s) | 655, 936, 1763, 1866, 2188, 2213, 2452, 3118 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 158, 303, 884 |
| BstNI | CCWGG | 5 cut(s) | 864, 1449, 2131, 2465, 3207 |
| BstNSI | RCATGY | 4 cut(s) | 901, 1794, 2973, 3422 |
| BstPI | GGTNACC | 1 cut(s) | 1571 |
| BstSCI | CCNGG | 7 cut(s) | 251, 862, 1447, 2129, 2463, 3205, 3800 |
| BstSFI | CTRYAG | 4 cut(s) | 1980, 2243, 2501, 2935 |
| BstSLI | GKGCMC | 2 cut(s) | 2966, 3163 |
| BstV1I | GCAGC | 8 cut(s) | 217, 419, 437, 899, 1188, 1717, 2050, 2969 |
| BstV2I | GAAGAC | 4 cut(s) | 526, 957, 1080, 3482 |
| BstX2I | RGATCY | 4 cut(s) | 613, 2830, 2867, 3660 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1183 |
| BstYI | RGATCY | 4 cut(s) | 613, 2830, 2867, 3660 |
| BstZ17I | GTATAC | 1 cut(s) | 2127 |
| Bsu15I | ATCGAT | 2 cut(s) | 124, 1929 |
| BsuI | GTATCC | 4 cut(s) | 144, 631, 1388, 1591 |
| BsuRI | GGCC | 5 cut(s) | 81, 2539, 2724, 3258, 3794 |
| BsuTUI | ATCGAT | 2 cut(s) | 124, 1929 |
| BtgI | CCRYGG | 2 cut(s) | 1176, 3789 |
| BtsCI | GGATG | 9 cut(s) | 575, 913, 1186, 1216, 1442, 1792, 2648, 2653, 3303 |
| BtsI | GCAGTG | 2 cut(s) | 729, 1434 |
| BtsIMutI | CAGTG | 7 cut(s) | 729, 1236, 1410, 1434, 2179, 2679, 2903 |
| BveI | ACCTGC | 1 cut(s) | 2236 |
| Cac8I | GCNNGC | 4 cut(s) | 405, 1705, 2939, 3576 |
| CfoI | GCGC | 3 cut(s) | 20, 1111, 3831 |
| Cfr10I | RCCGGY | 1 cut(s) | 751 |
| Cfr13I | GGNCC | 8 cut(s) | 80, 200, 209, 860, 1514, 2177, 2375, 2537 |
| ClaI | ATCGAT | 2 cut(s) | 124, 1929 |
| CseI | GACGC | 2 cut(s) | 2322, 2964 |
| CsiI | ACCWGGT | 1 cut(s) | 2463 |
| Csp6I | GTAC | 9 cut(s) | 97, 174, 749, 939, 1849, 2213, 3240, 3326, 3669 |
| CspAI | ACCGGT | 1 cut(s) | 751 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2155, 2190 |
| CviQI | GTAC | 9 cut(s) | 97, 174, 749, 939, 1849, 2213, 3240, 3326, 3669 |
| DinI | GGCGCC | 1 cut(s) | 19 |
| DraI | TTTAAA | 5 cut(s) | 370, 699, 2040, 3298, 3739 |
| EaeI | YGGCCR | 2 cut(s) | 3256, 3792 |
| Eam1104I | CTCTTC | 5 cut(s) | 320, 533, 759, 1869, 3218 |
| EarI | CTCTTC | 5 cut(s) | 320, 533, 759, 1869, 3218 |
| Ecl136II | GAGCTC | 3 cut(s) | 105, 161, 453 |
| Eco130I | CCWWGG | 3 cut(s) | 83, 1015, 1176 |
| Eco24I | GRGCYC | 4 cut(s) | 107, 163, 455, 1355 |
| Eco31I | GGTCTC | 2 cut(s) | 936, 1763 |
| Eco32I | GATATC | 2 cut(s) | 128, 1596 |
| Eco47I | GGWCC | 6 cut(s) | 200, 209, 860, 1514, 2177, 2375 |
| Eco53kI | GAGCTC | 3 cut(s) | 105, 161, 453 |
| Eco88I | CYCGRG | 1 cut(s) | 448 |
| Eco91I | GGTNACC | 1 cut(s) | 1571 |
| EcoICRI | GAGCTC | 3 cut(s) | 105, 161, 453 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1346 |
| EcoO109I | RGGNCCY | 2 cut(s) | 200, 209 |
| EcoO65I | GGTNACC | 1 cut(s) | 1571 |
| EcoRI | GAATTC | 3 cut(s) | 2625, 3228, 3275 |
| EcoRII | CCWGG | 5 cut(s) | 862, 1447, 2129, 2463, 3205 |
| EcoRV | GATATC | 2 cut(s) | 128, 1596 |
| EcoT14I | CCWWGG | 3 cut(s) | 83, 1015, 1176 |
| EcoT22I | ATGCAT | 3 cut(s) | 1494, 1792, 3732 |
| EcoT38I | GRGCYC | 4 cut(s) | 107, 163, 455, 1355 |
| EgeI | GGCGCC | 1 cut(s) | 19 |
| EheI | GGCGCC | 1 cut(s) | 19 |
| ErhI | CCWWGG | 3 cut(s) | 83, 1015, 1176 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 281, 313, 3006, 3038 |
| FaqI | GGGAC | 2 cut(s) | 101, 3818 |
| FauI | CCCGC | 1 cut(s) | 311 |
| FauNDI | CATATG | 1 cut(s) | 2157 |
| FbaI | TGATCA | 3 cut(s) | 1561, 1621, 1759 |
| FblI | GTMKAC | 4 cut(s) | 2078, 2126, 2766, 2875 |
| Fnu4HI | GCNGC | 9 cut(s) | 21, 231, 408, 426, 888, 1202, 1731, 2064, 2983 |
| FokI | GGATG | 9 cut(s) | 562, 920, 1193, 1203, 1429, 1799, 2640, 2655, 3290 |
| FriOI | GRGCYC | 4 cut(s) | 107, 163, 455, 1355 |
| Fsp4HI | GCNGC | 9 cut(s) | 21, 231, 408, 426, 888, 1202, 1731, 2064, 2983 |
| FspBI | CTAG | 7 cut(s) | 111, 471, 1356, 2618, 3093, 3396, 3575 |
| GlaI | GCGC | 3 cut(s) | 19, 1110, 3830 |
| GluI | GCNGC | 9 cut(s) | 21, 231, 408, 426, 888, 1202, 1731, 2064, 2983 |
| GsuI | CTGGAG | 3 cut(s) | 121, 2302, 3817 |
| HaeII | RGCGCY | 1 cut(s) | 21 |
| HaeIII | GGCC | 5 cut(s) | 81, 2539, 2724, 3258, 3794 |
| HapII | CCGG | 7 cut(s) | 78, 252, 752, 884, 1220, 2828, 3801 |
| HgaI | GACGC | 2 cut(s) | 2322, 2964 |
| HhaI | GCGC | 3 cut(s) | 20, 1111, 3831 |
| Hin1I | GRCGYC | 1 cut(s) | 18 |
| Hin6I | GCGC | 3 cut(s) | 18, 1109, 3829 |
| HinP1I | GCGC | 3 cut(s) | 18, 1109, 3829 |
| HincII | GTYRAC | 3 cut(s) | 418, 2470, 2485 |
| HindII | GTYRAC | 3 cut(s) | 418, 2470, 2485 |
| HindIII | AAGCTT | 2 cut(s) | 633, 3716 |
| HpaI | GTTAAC | 1 cut(s) | 418 |
| HpaII | CCGG | 7 cut(s) | 78, 252, 752, 884, 1220, 2828, 3801 |
| HphI | GGTGA | 7 cut(s) | 46, 1583, 2423, 3284, 3551, 3598, 3610 |
| HpyCH4IV | ACGT | 1 cut(s) | 1578 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 158, 303, 884 |
| HpySE526I | ACGT | 1 cut(s) | 1578 |
| Hsp92I | GRCGYC | 1 cut(s) | 18 |
| HspAI | GCGC | 3 cut(s) | 18, 1109, 3829 |
| KasI | GGCGCC | 1 cut(s) | 17 |
| Kpn2I | TCCGGA | 1 cut(s) | 1219 |
| KpnI | GGTACC | 2 cut(s) | 942, 3329 |
| Ksp22I | TGATCA | 3 cut(s) | 1561, 1621, 1759 |
| KspAI | GTTAAC | 1 cut(s) | 418 |
| Lsp1109I | GCAGC | 8 cut(s) | 217, 419, 437, 899, 1188, 1717, 2050, 2969 |
| LweI | GCATC | 9 cut(s) | 982, 1462, 1479, 1777, 2633, 3207, 3312, 3505, 3739 |
| MabI | ACCWGGT | 1 cut(s) | 2463 |
| MaeI | CTAG | 7 cut(s) | 111, 471, 1356, 2618, 3093, 3396, 3575 |
| MaeII | ACGT | 1 cut(s) | 1578 |
| MaeIII | GTNAC | 5 cut(s) | 441, 1571, 2807, 2818, 3539 |
| MbiI | CCGCTC | 1 cut(s) | 492 |
| MfeI | CAATTG | 2 cut(s) | 1518, 2879 |
| MflI | RGATCY | 4 cut(s) | 613, 2830, 2867, 3660 |
| MhlI | GDGCHC | 7 cut(s) | 107, 163, 455, 1355, 2687, 2966, 3163 |
| MlsI | TGGCCA | 1 cut(s) | 3794 |
| MluNI | TGGCCA | 1 cut(s) | 3794 |
| Mly113I | GGCGCC | 1 cut(s) | 18 |
| MlyI | GAGTC | 3 cut(s) | 1868, 2507, 3073 |
| MmeI | TCCRAC | 7 cut(s) | 563, 1123, 1488, 1550, 2290, 2767, 3091 |
| Mox20I | TGGCCA | 1 cut(s) | 3794 |
| Mph1103I | ATGCAT | 3 cut(s) | 1494, 1792, 3732 |
| MroI | TCCGGA | 1 cut(s) | 1219 |
| MroXI | GAANNNNTTC | 1 cut(s) | 3841 |
| MscI | TGGCCA | 1 cut(s) | 3794 |
| MslI | CAYNNNNRTG | 5 cut(s) | 896, 902, 1181, 1929, 3308 |
| Msp20I | TGGCCA | 1 cut(s) | 3794 |
| MspA1I | CMGCKG | 4 cut(s) | 1079, 1776, 2381, 3650 |
| MspI | CCGG | 7 cut(s) | 78, 252, 752, 884, 1220, 2828, 3801 |
| MspR9I | CCNGG | 7 cut(s) | 253, 864, 1449, 2131, 2465, 3207, 3802 |
| MunI | CAATTG | 2 cut(s) | 1518, 2879 |
| Mva1269I | GAATGC | 5 cut(s) | 1643, 1940, 2332, 2565, 3001 |
| MvaI | CCWGG | 5 cut(s) | 864, 1449, 2131, 2465, 3207 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 158, 303, 884 |
| NarI | GGCGCC | 1 cut(s) | 18 |
| NciI | CCSGG | 2 cut(s) | 253, 3802 |
| NcoI | CCATGG | 1 cut(s) | 1176 |
| NdeI | CATATG | 1 cut(s) | 2157 |
| NheI | GCTAGC | 1 cut(s) | 3574 |
| NlaIV | GGNNCC | 9 cut(s) | 19, 67, 201, 940, 2376, 2778, 3327, 3724, 3787 |
| NmeAIII | GCCGAG | 1 cut(s) | 2565 |
| NmuCI | GTSAC | 3 cut(s) | 1571, 2807, 3539 |
| NsiI | ATGCAT | 3 cut(s) | 1494, 1792, 3732 |
| NspI | RCATGY | 4 cut(s) | 901, 1794, 2973, 3422 |
| PaeR7I | CTCGAG | 1 cut(s) | 448 |
| PaqCI | CACCTGC | 1 cut(s) | 2236 |
| PciI | ACATGT | 3 cut(s) | 897, 2969, 3418 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 21 |
| PctI | GAATGC | 5 cut(s) | 1643, 1940, 2332, 2565, 3001 |
| PdmI | GAANNNNTTC | 1 cut(s) | 3841 |
| PflFI | GACNNNGTC | 2 cut(s) | 2074, 2898 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 1448 |
| PfoI | TCCNGGA | 1 cut(s) | 862 |
| PinAI | ACCGGT | 1 cut(s) | 751 |
| PkrI | GCNGC | 9 cut(s) | 22, 232, 409, 427, 889, 1203, 1732, 2065, 2984 |
| PleI | GAGTC | 3 cut(s) | 1867, 2507, 3072 |
| PluTI | GGCGCC | 1 cut(s) | 21 |
| PpsI | GAGTC | 3 cut(s) | 1867, 2507, 3072 |
| Ppu21I | YACGTR | 1 cut(s) | 1579 |
| PpuMI | RGGWCCY | 2 cut(s) | 200, 209 |
| PscI | ACATGT | 3 cut(s) | 897, 2969, 3418 |
| Psp124BI | GAGCTC | 3 cut(s) | 107, 163, 455 |
| Psp5II | RGGWCCY | 2 cut(s) | 200, 209 |
| Psp6I | CCWGG | 5 cut(s) | 862, 1447, 2129, 2463, 3205 |
| PspEI | GGTNACC | 1 cut(s) | 1571 |
| PspGI | CCWGG | 5 cut(s) | 862, 1447, 2129, 2463, 3205 |
| PspN4I | GGNNCC | 9 cut(s) | 19, 67, 201, 940, 2376, 2778, 3327, 3724, 3787 |
| PspPI | GGNCC | 8 cut(s) | 80, 200, 209, 860, 1514, 2177, 2375, 2537 |
| PspPPI | RGGWCCY | 2 cut(s) | 200, 209 |
| PspXI | VCTCGAGB | 1 cut(s) | 448 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 699, 731 |
| PstI | CTGCAG | 3 cut(s) | 1984, 2247, 2939 |
| PsuI | RGATCY | 4 cut(s) | 613, 2830, 2867, 3660 |
| PsyI | GACNNNGTC | 2 cut(s) | 2074, 2898 |
| PvuII | CAGCTG | 1 cut(s) | 2381 |
| RsaI | GTAC | 9 cut(s) | 98, 175, 750, 940, 1850, 2214, 3241, 3327, 3670 |
| RsaNI | GTAC | 9 cut(s) | 97, 174, 749, 939, 1849, 2213, 3240, 3326, 3669 |
| RseI | CAYNNNNRTG | 5 cut(s) | 896, 902, 1181, 1929, 3308 |
| SacI | GAGCTC | 3 cut(s) | 107, 163, 455 |
| SatI | GCNGC | 9 cut(s) | 21, 231, 408, 426, 888, 1202, 1731, 2064, 2983 |
| Sau96I | GGNCC | 8 cut(s) | 80, 200, 209, 860, 1514, 2177, 2375, 2537 |
| ScaI | AGTACT | 1 cut(s) | 98 |
| SchI | GAGTC | 3 cut(s) | 1868, 2507, 3073 |
| ScrFI | CCNGG | 7 cut(s) | 253, 864, 1449, 2131, 2465, 3207, 3802 |
| SduI | GDGCHC | 7 cut(s) | 107, 163, 455, 1355, 2687, 2966, 3163 |
| SexAI | ACCWGGT | 1 cut(s) | 2463 |
| SfaNI | GCATC | 9 cut(s) | 982, 1462, 1479, 1777, 2633, 3207, 3312, 3505, 3739 |
| SfcI | CTRYAG | 4 cut(s) | 1980, 2243, 2501, 2935 |
| SfoI | GGCGCC | 1 cut(s) | 19 |
| Sfr274I | CTCGAG | 1 cut(s) | 448 |
| SinI | GGWCC | 6 cut(s) | 200, 209, 860, 1514, 2177, 2375 |
| SlaI | CTCGAG | 1 cut(s) | 448 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 896, 902, 1181, 1929, 3308 |
| SmlI | CTYRAG | 4 cut(s) | 448, 1856, 2106, 2630 |
| SmoI | CTYRAG | 4 cut(s) | 448, 1856, 2106, 2630 |
| SsiI | CCGC | 7 cut(s) | 21, 304, 490, 1079, 1776, 3648, 3747 |
| SspDI | GGCGCC | 1 cut(s) | 17 |
| SspI | AATATT | 2 cut(s) | 1267, 3842 |
| SspMI | CTAG | 7 cut(s) | 111, 471, 1356, 2618, 3093, 3396, 3575 |
| SstI | GAGCTC | 3 cut(s) | 107, 163, 455 |
| StyD4I | CCNGG | 7 cut(s) | 251, 862, 1447, 2129, 2463, 3205, 3800 |
| StyI | CCWWGG | 3 cut(s) | 83, 1015, 1176 |
| TaiI | ACGT | 1 cut(s) | 1581 |
| TaqI | TCGA | 7 cut(s) | 124, 157, 221, 449, 1929, 2342, 3446 |
| TatI | WGTACW | 4 cut(s) | 96, 173, 1848, 3239 |
| TauI | GCSGC | 1 cut(s) | 23 |
| TscAI | CASTG | 7 cut(s) | 729, 1243, 1410, 1441, 2179, 2679, 2903 |
| TseFI | GTSAC | 3 cut(s) | 1571, 2807, 3539 |
| TseI | GCWGC | 8 cut(s) | 230, 407, 425, 887, 1201, 1730, 2063, 2982 |
| Tsp45I | GTSAC | 3 cut(s) | 1571, 2807, 3539 |
| TspGWI | ACGGA | 4 cut(s) | 120, 435, 1785, 1928 |
| TspRI | CASTG | 7 cut(s) | 729, 1243, 1410, 1441, 2179, 2679, 2903 |
| Tth111I | GACNNNGTC | 2 cut(s) | 2074, 2898 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 1448 |
| VneI | GTGCAC | 2 cut(s) | 2962, 3159 |
| VpaK11BI | GGWCC | 6 cut(s) | 200, 209, 860, 1514, 2177, 2375 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1346 |
| XapI | RAATTY | 7 cut(s) | 189, 281, 2032, 2625, 3228, 3275, 3382 |
| XbaI | TCTAGA | 1 cut(s) | 470 |
| XceI | RCATGY | 4 cut(s) | 901, 1794, 2973, 3422 |
| XcmI | CCANNNNNNNNNTGG | 4 cut(s) | 270, 3020, 3266, 3564 |
| XhoI | CTCGAG | 1 cut(s) | 448 |
| XmiI | GTMKAC | 4 cut(s) | 2078, 2126, 2766, 2875 |
| XmnI | GAANNNNTTC | 1 cut(s) | 3841 |
| XspI | CTAG | 7 cut(s) | 111, 471, 1356, 2618, 3093, 3396, 3575 |
| ZrmI | AGTACT | 1 cut(s) | 98 |
| Zsp2I | ATGCAT | 3 cut(s) | 1494, 1792, 3732 |