Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb4

Orthogroup ID

OG0012227

Physical Location & Seq

Genomic Coordinates Forward (+)

31012473 .. 31015422

Gene Structure 2950 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_4g32300.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1869 bp

ATGGCCGGCGCCGACCACCACCACCGCGCGTCGGAGCTTCTGCAACTCGTCCACGACGTCGTCGGCGCCGATAAGTCCTCCGCCGCCGGAGTGTTCAGGAAGGAATGCACCGATCTGGTGCGGCGGATCGCGCTGCTGACGCATTTGTTCGAGGAGATTAGGGACTTCAAAGGCCGCGAGTTTCTAAATGCTTCCACTTCTTCCGGCTCGTCGGAGCCTTGGGTTTCCGATCTGGTCACGGCTCTTCTGGCCGCGAAGCGGCTAGTAGTCAACTCCAGCTGCGCCGCTCCTGTGCTCGCAGAGGAAGCAAAGAAGAAGATAAGCTTCCATTTCCAATGCGCCACCTGGAAATTGGAGAAGGCGCTGGGTGGAATACCGTATGATCAGTTCGAAATCTCAGAGGAAGTTGAAGAACAGGTTGCATTGGTTAGATCACAATTGAGAAGAGCGATTGAAAGATATGGGTCGTTGGTTACGAGGAAAATGTCATTCCATTGCCTCCCTCAGTCTCTGGTAGAGTCTGGCAAATGGGTGCATGTCGTGGAGGATAATAGTAGTTCAAAGATGACGAACAGTCTTCCCAAGAGCTTTAGTGCTGATGATCTGGTTCATAAATTGCAAAGGATGAGTAATTTTCGTGTGGCAGAGTTGCCCTCACTCTGCTCGACAAATGGAACTCATGTTGTTGGTGACGAAGATATGAACAAGAAGCCTGACGCGACTGTCATCCCTGCTGATTTTATATGCCCAATATCTCTGGAACTCATGAGAGATCCTGTTATTGTGGCCACTGGTCAGACGTACGAGAGATCTTACATACAGAGATGGATAGACTGCGGAAATACAACCTGTCCGAAAACTCAGCAGAAGCTTCAAAACTTGACATTAACTCCAAACTATGTCTTGAGAAGTCTAGTTGCTCAGTGGTGTATTGACAACAACATTGAGCAGCCAACGGGATTAACAAACGGTAAACTCAAGAAGAGCGATGGATCCTTTCGTGACATTAGTGGGGACATAGCGACCATTCGAGCTCTGGTAAGCAAGCTTGCAGGTCGATCAATTGAGGAGCGGAGAGCAGCTGCATCAGAGATTAGGTCACTGTCCAAAAGAAGTACTGATAACCGAATACTTATTGCAGAAGCGGGTGCTATTCCAGTACTGGTCAATCTCTTAACAGTAGACGATGGCTTAACACAAGAGAATGCAGTAACGTCCATTCTCAACCTCTCTATATATGAAAACAACAAGGGGCTCATAATGCTTGCTGGTGCTGTTCCTTCTATTGTCCAAGTCCTAAGATCTGGAAGCATGGAGGCGCGAGAGAACGCAGCAGCGACCATTTTTAGTCTGTCGCTTGCTGATGAGAACAAAATAATTATAGGTGCATCAGGAGCAATTCAAGCTCTGGTGGAATTGCTTCAAAATGGGAGCACAAGAGGGAAGAAGGATGCCGCAACAGCGCTGTTCAATTTGTGTATTTATCAGGGCAACAAGGGCAGGGCTCTCAGAGCGGGGATAATTACAGCTTTACTAAAGATGCTAACTGATTCAAGCAATTGCATGGTTGATGAAGCACTGACCATTATGTCAGTTCTTGCTAACCATCAAGAGGCAAAAGTTACTATAGTAAAGGCCGGCACAATACCTGTTTTGATAGACCTTTTGCGGACAGGTCTGCCTAGAAATAAAGAGAATGCATCTGCCATATTGCTCGCATTGTGCAAGAGAGAGACCGAGAACCTTGCCTGCCTAAGTAGGCTTGGTGCAGTCATACCATTGACAGAGCTCACCAAGAGCGGAACAGAGAGGGCCAAAAGGAAGGCTAGTTCATTGCTGGAGCATCTTCGGAAATTGCAGCATGTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004842 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009966 GO:0009987 GO:0010033 GO:0010200 GO:0010243 GO:0010646 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0023051 GO:0031647 GO:0031648 GO:0032446 GO:0036211 GO:0042221 GO:0042493 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043621 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0048583 GO:0050789 GO:0050794 GO:0050896 GO:0051865 GO:0065007 GO:0065008 GO:0070647 GO:0071704 GO:0140096 GO:1901564 GO:1901698 GO:1901700 GO:2000022

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Arm U-box

Protein Analysis

623

Amino Acids

67.88

Weight (kDa)

8.66

Isoelectric Point (pI)

44.83

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PUB10_N	PF25368	33 - 150	4.4e-41	PUB10-like, N-terminal domain
U-box	PF04564	243 - 313	9.6e-19	U-box domain
ARM_PUB	PF25598	343 - 616	7.3e-24	Plant U-box protein ARM repeat region
ARM_ARMC5	PF24768	354 - 523	6.8e-10	ARMC5
Arm	PF00514	372 - 411	8.1e-08	Armadillo/beta-catenin-like repeat
Arm	PF00514	455 - 493	2e-08	Armadillo/beta-catenin-like repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0012227)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G23030 AT1G71020 AT1G71020
fragaria_vesca	FvH4_4g32300
malus_domestica	MD13G1026300.v1.1 MD16G1029300.v1.1
prunus_persica	Prupe.1G323500_v2.0.a1
pyrus_communis	pycom16g02520
rosa_chinensis	RchiOBHm_Chr4g0441091
rosa_laevigata	RLG00000006115
rosa_multiflora	Rmu_co8350821.1_g000001 Rmu_sc0006317.1_g000015
rosa_roxburghii	Rroxscaffold_5G00382050
rosa_rugosa	Rorug04G0331000
rosa_samantha	Rh4AG382600 Rh4BG396400 Rh4CG411500 Rh4DG389200
rosa_wichuraiana	Rw4G033020

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	2 cut(s)	722, 1588
AatII	GACGTC	1 cut(s)	60
Acc36I	ACCTGC	1 cut(s)	1043
AccB1I	GGYRCC	2 cut(s)	8, 65
AccBSI	CCGCTC	4 cut(s)	287, 1072, 1514, 1800
AccI	GTMKAC	1 cut(s)	1182
AccII	CGCG	7 cut(s)	27, 29, 131, 177, 254, 719, 1321
AclWI	GGATC	4 cut(s)	134, 767, 987, 1000
AcoI	YGGCCR	3 cut(s)	3, 249, 786
AcyI	GRCGYC	3 cut(s)	9, 57, 66
AfaI	GTAC	3 cut(s)	803, 1117, 1161
AfeI	AGCGCT	1 cut(s)	1464
AfiI	CCNNNNNNNGG	3 cut(s)	31, 258, 1612
AgsI	TTSAA	9 cut(s)	169, 410, 455, 561, 875, 1403, 1424, 1471, 1554
AhdI	GACNNNNNGTC	1 cut(s)	573
AjnI	CCWGG	1 cut(s)	344
AloI	GAACNNNNNNTCC	2 cut(s)	1813, 1845
Alw21I	GWGCWC	4 cut(s)	297, 1036, 1436, 1791
Alw26I	GTCTC	2 cut(s)	513, 1727
AlwI	GGATC	4 cut(s)	134, 767, 987, 1000
AlwNI	CAGNNNCTG	1 cut(s)	511
Aor51HI	AGCGCT	1 cut(s)	1464
AoxI	GGCC	6 cut(s)	3, 172, 249, 786, 1635, 1812
ApeKI	GCWGC	8 cut(s)	133, 279, 949, 1079, 1082, 1331, 1334, 1858
Asp700I	GAANNNNTTC	1 cut(s)	1419
AspLEI	GCGC	9 cut(s)	11, 29, 68, 133, 284, 341, 364, 1321, 1465
AspS9I	GGNCC	1 cut(s)	1812
AsuHPI	GGTGA	2 cut(s)	701, 1783
AsuII	TTCGAA	1 cut(s)	390
BalI	TGGCCA	1 cut(s)	788
BamHI	GGATCC	1 cut(s)	992
BanI	GGYRCC	2 cut(s)	8, 65
BanII	GRGCYC	4 cut(s)	1036, 1257, 1507, 1791
BbsI	GAAGAC	1 cut(s)	569
Bbv12I	GWGCWC	4 cut(s)	297, 1036, 1436, 1791
BbvI	GCAGC	7 cut(s)	120, 266, 961, 1069, 1091, 1343, 1346
BccI	CCATC	4 cut(s)	819, 983, 1181, 1614
BceAI	ACGGC	1 cut(s)	255
BcgI	CGANNNNNNTGC	2 cut(s)	1727, 1761
BciT130I	CCWGG	1 cut(s)	346
BclI	TGATCA	1 cut(s)	382
BcoDI	GTCTC	2 cut(s)	513, 1727
BfaI	CTAG	4 cut(s)	263, 914, 1683, 1827
BfmI	CTRYAG	1 cut(s)	1626
BfoI	RGCGCY	4 cut(s)	12, 69, 365, 1466
BfuAI	ACCTGC	1 cut(s)	1043
BglII	AGATCT	2 cut(s)	809, 1301
BmcAI	AGTACT	2 cut(s)	1117, 1161
Bme1390I	CCNGG	1 cut(s)	346
BmeRI	GACNNNNNGTC	1 cut(s)	573
BmgT120I	GGNCC	1 cut(s)	1812
BmiI	GGNNCC	4 cut(s)	10, 67, 216, 994
BmrFI	CCNGG	1 cut(s)	346
BmsI	GCATC	6 cut(s)	1094, 1397, 1441, 1530, 1709, 1852
BpiI	GAAGAC	1 cut(s)	569
BplI	GAGNNNNNCTC	2 cut(s)	638, 670
BpmI	CTGGAG	2 cut(s)	259, 1859
Bpu14I	TTCGAA	1 cut(s)	390
BpuEI	CTTGAG	2 cut(s)	925, 962
BsaHI	GRCGYC	3 cut(s)	9, 57, 66
BsaI	GGTCTC	1 cut(s)	1727
BsaJI	CCNNGG	1 cut(s)	218
BsaXI	ACNNNNNCTCC	2 cut(s)	874, 904
Bsc4I	CCNNNNNNNGG	3 cut(s)	31, 258, 1612
Bse118I	RCCGGY	2 cut(s)	5, 1637
Bse1I	ACTGG	3 cut(s)	796, 1157, 1167
Bse3DI	GCAATG	2 cut(s)	493, 1832
BseBI	CCWGG	1 cut(s)	346
BseDI	CCNNGG	1 cut(s)	218
BseGI	GGATG	3 cut(s)	630, 726, 1456
BseLI	CCNNNNNNNGG	3 cut(s)	31, 258, 1612
BseMI	GCAATG	2 cut(s)	493, 1832
BseMII	CTCAG	5 cut(s)	411, 518, 875, 935, 1522
BseNI	ACTGG	3 cut(s)	796, 1157, 1167
BseRI	GAGGAG	2 cut(s)	167, 1082
BseXI	GCAGC	7 cut(s)	120, 266, 961, 1069, 1091, 1343, 1346
BseYI	CCCAGC	1 cut(s)	364
BsgI	GTGCAG	1 cut(s)	1788
Bsh1236I	CGCG	7 cut(s)	27, 29, 131, 177, 254, 719, 1321
BshFI	GGCC	6 cut(s)	5, 174, 251, 788, 1637, 1814
BshNI	GGYRCC	2 cut(s)	8, 65
BsiHKAI	GWGCWC	4 cut(s)	297, 1036, 1436, 1791
BsiSI	CCGG	4 cut(s)	6, 87, 204, 1638
BsiWI	CGTACG	1 cut(s)	801
BslFI	GGGAC	2 cut(s)	176, 1028
BslI	CCNNNNNNNGG	3 cut(s)	31, 258, 1612
BsmAI	GTCTC	2 cut(s)	513, 1727
BsmFI	GGGAC	2 cut(s)	176, 1028
BsmI	GAATGC	3 cut(s)	110, 1210, 1702
BsnI	GGCC	6 cut(s)	5, 174, 251, 788, 1637, 1814
Bso31I	GGTCTC	1 cut(s)	1727
Bsp119I	TTCGAA	1 cut(s)	390
Bsp1286I	GDGCHC	6 cut(s)	297, 1036, 1257, 1436, 1507, 1791
BspANI	GGCC	6 cut(s)	5, 174, 251, 788, 1637, 1814
BspCNI	CTCAG	5 cut(s)	410, 517, 874, 934, 1521
BspFNI	CGCG	7 cut(s)	27, 29, 131, 177, 254, 719, 1321
BspHI	TCATGA	1 cut(s)	765
BspLI	GGNNCC	4 cut(s)	10, 67, 216, 994
BspMI	ACCTGC	1 cut(s)	1043
BspPI	GGATC	4 cut(s)	134, 767, 987, 1000
BspQI	GCTCTTC	3 cut(s)	249, 439, 977
BspT104I	TTCGAA	1 cut(s)	390
BspT107I	GGYRCC	2 cut(s)	8, 65
BspTNI	GGTCTC	1 cut(s)	1727
BsrBI	CCGCTC	4 cut(s)	287, 1072, 1514, 1800
BsrDI	GCAATG	2 cut(s)	493, 1832
BsrFI	RCCGGY	2 cut(s)	5, 1637
BsrI	ACTGG	3 cut(s)	796, 1157, 1167
BssAI	RCCGGY	2 cut(s)	5, 1637
BssECI	CCNNGG	1 cut(s)	218
BssNI	GRCGYC	3 cut(s)	9, 57, 66
BssT1I	CCWWGG	1 cut(s)	218
Bst2UI	CCWGG	1 cut(s)	346
Bst4CI	ACNGT	6 cut(s)	378, 575, 724, 971, 1104, 1180
Bst6I	CTCTTC	3 cut(s)	249, 439, 977
BstACI	GRCGYC	3 cut(s)	9, 57, 66
BstBI	TTCGAA	1 cut(s)	390
BstC8I	GCNNGC	9 cut(s)	7, 297, 1046, 1050, 1266, 1359, 1639, 1716, 1750
BstDEI	CTNAG	7 cut(s)	397, 504, 861, 921, 1298, 1508, 1754
BstF5I	GGATG	3 cut(s)	630, 726, 1456
BstFNI	CGCG	7 cut(s)	27, 29, 131, 177, 254, 719, 1321
BstH2I	RGCGCY	4 cut(s)	12, 69, 365, 1466
BstHHI	GCGC	9 cut(s)	11, 29, 68, 133, 284, 341, 364, 1321, 1465
BstMAI	GTCTC	2 cut(s)	513, 1727
BstNI	CCWGG	1 cut(s)	346
BstNSI	RCATGY	2 cut(s)	539, 1865
BstSCI	CCNGG	1 cut(s)	344
BstSFI	CTRYAG	1 cut(s)	1626
BstUI	CGCG	7 cut(s)	27, 29, 131, 177, 254, 719, 1321
BstV1I	GCAGC	7 cut(s)	120, 266, 961, 1069, 1091, 1343, 1346
BstV2I	GAAGAC	1 cut(s)	569
BstX2I	RGATCY	4 cut(s)	772, 809, 992, 1301
BstYI	RGATCY	4 cut(s)	772, 809, 992, 1301
BsuRI	GGCC	6 cut(s)	5, 174, 251, 788, 1637, 1814
BtgZI	GCGATG	1 cut(s)	1002
BtsCI	GGATG	3 cut(s)	630, 726, 1456
BtsIMutI	CAGTG	4 cut(s)	789, 929, 1100, 1577
BveI	ACCTGC	1 cut(s)	1043
Cac8I	GCNNGC	9 cut(s)	7, 297, 1046, 1050, 1266, 1359, 1639, 1716, 1750
CaiI	CAGNNNCTG	1 cut(s)	511
CciI	TCATGA	1 cut(s)	765
CfoI	GCGC	9 cut(s)	11, 29, 68, 133, 284, 341, 364, 1321, 1465
Cfr10I	RCCGGY	2 cut(s)	5, 1637
Cfr13I	GGNCC	1 cut(s)	1812
CseI	GACGC	3 cut(s)	18, 148, 725
Csp6I	GTAC	3 cut(s)	802, 1116, 1160
CviAII	CATG	6 cut(s)	536, 680, 766, 1312, 1564, 1862
CviQI	GTAC	3 cut(s)	802, 1116, 1160
DdeI	CTNAG	7 cut(s)	397, 504, 861, 921, 1298, 1508, 1754
DinI	GGCGCC	2 cut(s)	10, 67
DrdI	GACNNNNNNGTC	2 cut(s)	722, 1588
DriI	GACNNNNNGTC	1 cut(s)	573
DseDI	GACNNNNNNGTC	2 cut(s)	722, 1588
EaeI	YGGCCR	3 cut(s)	3, 249, 786
Eam1104I	CTCTTC	3 cut(s)	249, 439, 977
Eam1105I	GACNNNNNGTC	1 cut(s)	573
EarI	CTCTTC	3 cut(s)	249, 439, 977
EciI	GGCGGA	2 cut(s)	70, 139
Ecl136II	GAGCTC	2 cut(s)	1034, 1789
Eco130I	CCWWGG	1 cut(s)	218
Eco24I	GRGCYC	4 cut(s)	1036, 1257, 1507, 1791
Eco31I	GGTCTC	1 cut(s)	1727
Eco47III	AGCGCT	1 cut(s)	1464
Eco53kI	GAGCTC	2 cut(s)	1034, 1789
EcoICRI	GAGCTC	2 cut(s)	1034, 1789
EcoRII	CCWGG	1 cut(s)	344
EcoT14I	CCWWGG	1 cut(s)	218
EcoT22I	ATGCAT	1 cut(s)	1702
EcoT38I	GRGCYC	4 cut(s)	1036, 1257, 1507, 1791
EgeI	GGCGCC	2 cut(s)	10, 67
EheI	GGCGCC	2 cut(s)	10, 67
ErhI	CCWWGG	1 cut(s)	218
FaeI	CATG	6 cut(s)	539, 683, 769, 1315, 1567, 1865
FalI	AAGNNNNNCTT	2 cut(s)	308, 340
FaqI	GGGAC	2 cut(s)	176, 1028
FatI	CATG	6 cut(s)	535, 679, 765, 1311, 1563, 1861
FauI	CCCGC	2 cut(s)	1138, 1507
FbaI	TGATCA	1 cut(s)	382
FblI	GTMKAC	1 cut(s)	1182
FokI	GGATG	3 cut(s)	637, 713, 1463
FriOI	GRGCYC	4 cut(s)	1036, 1257, 1507, 1791
FspBI	CTAG	4 cut(s)	263, 914, 1683, 1827
GlaI	GCGC	9 cut(s)	10, 28, 67, 132, 283, 340, 363, 1320, 1464
GsaI	CCCAGC	1 cut(s)	368
GsuI	CTGGAG	2 cut(s)	259, 1859
HaeII	RGCGCY	4 cut(s)	12, 69, 365, 1466
HaeIII	GGCC	6 cut(s)	5, 174, 251, 788, 1637, 1814
HapII	CCGG	4 cut(s)	6, 87, 204, 1638
HgaI	GACGC	3 cut(s)	18, 148, 725
HhaI	GCGC	9 cut(s)	11, 29, 68, 133, 284, 341, 364, 1321, 1465
Hin1I	GRCGYC	3 cut(s)	9, 57, 66
Hin1II	CATG	6 cut(s)	539, 683, 769, 1315, 1567, 1865
Hin6I	GCGC	9 cut(s)	9, 27, 66, 131, 282, 339, 362, 1319, 1463
HinP1I	GCGC	9 cut(s)	9, 27, 66, 131, 282, 339, 362, 1319, 1463
HincII	GTYRAC	1 cut(s)	271
HindII	GTYRAC	1 cut(s)	271
HindIII	AAGCTT	3 cut(s)	322, 869, 1046
HinfI	GANTC	2 cut(s)	518, 1550
HpaII	CCGG	4 cut(s)	6, 87, 204, 1638
HphI	GGTGA	2 cut(s)	701, 1783
Hpy166II	GTNNAC	4 cut(s)	52, 271, 974, 1183
Hpy188I	TCNGA	9 cut(s)	34, 214, 229, 400, 798, 855, 1090, 1511, 1851
Hpy188III	TCNNGA	9 cut(s)	97, 758, 766, 904, 979, 1001, 1305, 1392, 1610
Hpy8I	GTNNAC	4 cut(s)	52, 271, 974, 1183
Hpy99I	CGWCG	5 cut(s)	34, 59, 62, 65, 214
HpyAV	CCTTC	5 cut(s)	94, 352, 1290, 1441, 1816
HpyCH4III	ACNGT	6 cut(s)	378, 575, 724, 971, 1104, 1180
HpyCH4IV	ACGT	3 cut(s)	57, 800, 1214
HpyF3I	CTNAG	7 cut(s)	397, 504, 861, 921, 1298, 1508, 1754
HpySE526I	ACGT	3 cut(s)	57, 800, 1214
Hsp92I	GRCGYC	3 cut(s)	9, 57, 66
Hsp92II	CATG	6 cut(s)	539, 683, 769, 1315, 1567, 1865
HspAI	GCGC	9 cut(s)	9, 27, 66, 131, 282, 339, 362, 1319, 1463
KasI	GGCGCC	2 cut(s)	8, 65
KroI	GCCGGC	2 cut(s)	5, 1637
KroNI	GCCGGC	2 cut(s)	7, 1639
Ksp22I	TGATCA	1 cut(s)	382
LguI	GCTCTTC	3 cut(s)	249, 439, 977
LmnI	GCTCC	7 cut(s)	34, 214, 292, 1069, 1394, 1431, 1840
Lsp1109I	GCAGC	7 cut(s)	120, 266, 961, 1069, 1091, 1343, 1346
LweI	GCATC	6 cut(s)	1094, 1397, 1441, 1530, 1709, 1852
MaeI	CTAG	4 cut(s)	263, 914, 1683, 1827
MaeII	ACGT	3 cut(s)	57, 800, 1214
MaeIII	GTNAC	7 cut(s)	235, 472, 689, 1001, 1098, 1210, 1621
MbiI	CCGCTC	4 cut(s)	287, 1072, 1514, 1800
MfeI	CAATTG	3 cut(s)	437, 1062, 1558
MflI	RGATCY	4 cut(s)	772, 809, 992, 1301
MhlI	GDGCHC	6 cut(s)	297, 1036, 1257, 1436, 1507, 1791
MlsI	TGGCCA	1 cut(s)	788
MluNI	TGGCCA	1 cut(s)	788
Mly113I	GGCGCC	2 cut(s)	9, 66
MlyI	GAGTC	1 cut(s)	527
MmeI	TCCRAC	2 cut(s)	12, 192
Mox20I	TGGCCA	1 cut(s)	788
Mph1103I	ATGCAT	1 cut(s)	1702
MroNI	GCCGGC	2 cut(s)	5, 1637
MroXI	GAANNNNTTC	1 cut(s)	1419
MscI	TGGCCA	1 cut(s)	788
MseI	TTAA	4 cut(s)	887, 962, 1175, 1193
Msp20I	TGGCCA	1 cut(s)	788
MspA1I	CMGCKG	2 cut(s)	279, 1082
MspI	CCGG	4 cut(s)	6, 87, 204, 1638
MspR9I	CCNGG	1 cut(s)	346
MunI	CAATTG	3 cut(s)	437, 1062, 1558
Mva1269I	GAATGC	3 cut(s)	110, 1210, 1702
MvaI	CCWGG	1 cut(s)	346
MvnI	CGCG	7 cut(s)	27, 29, 131, 177, 254, 719, 1321
NaeI	GCCGGC	2 cut(s)	7, 1639
NarI	GGCGCC	2 cut(s)	9, 66
NgoMIV	GCCGGC	2 cut(s)	5, 1637
NlaIII	CATG	6 cut(s)	539, 683, 769, 1315, 1567, 1865
NlaIV	GGNNCC	4 cut(s)	10, 67, 216, 994
NmuCI	GTSAC	4 cut(s)	235, 689, 1001, 1098
NsiI	ATGCAT	1 cut(s)	1702
NspI	RCATGY	2 cut(s)	539, 1865
NspV	TTCGAA	1 cut(s)	390
PagI	TCATGA	1 cut(s)	765
PciSI	GCTCTTC	3 cut(s)	249, 439, 977
PcsI	WCGNNNNNNNCGW	3 cut(s)	54, 66, 473
PctI	GAATGC	3 cut(s)	110, 1210, 1702
PdiI	GCCGGC	2 cut(s)	7, 1639
PdmI	GAANNNNTTC	1 cut(s)	1419
PfeI	GAWTC	1 cut(s)	1550
Pfl23II	CGTACG	1 cut(s)	801
PflFI	GACNNNGTC	1 cut(s)	59
PleI	GAGTC	1 cut(s)	526
PluTI	GGCGCC	2 cut(s)	12, 69
PpsI	GAGTC	1 cut(s)	526
Psp124BI	GAGCTC	2 cut(s)	1036, 1791
Psp6I	CCWGG	1 cut(s)	344
PspFI	CCCAGC	1 cut(s)	364
PspGI	CCWGG	1 cut(s)	344
PspLI	CGTACG	1 cut(s)	801
PspN4I	GGNNCC	4 cut(s)	10, 67, 216, 994
PspPI	GGNCC	1 cut(s)	1812
PsrI	GAACNNNNNNTAC	2 cut(s)	371, 403
PstNI	CAGNNNCTG	1 cut(s)	511
PsuI	RGATCY	4 cut(s)	772, 809, 992, 1301
PsyI	GACNNNGTC	1 cut(s)	59
PvuII	CAGCTG	2 cut(s)	279, 1082
RsaI	GTAC	3 cut(s)	803, 1117, 1161
RsaNI	GTAC	3 cut(s)	802, 1116, 1160
SacI	GAGCTC	2 cut(s)	1036, 1791
SapI	GCTCTTC	3 cut(s)	249, 439, 977
SaqAI	TTAA	4 cut(s)	887, 962, 1175, 1193
Sau96I	GGNCC	1 cut(s)	1812
ScaI	AGTACT	2 cut(s)	1117, 1161
SchI	GAGTC	1 cut(s)	527
ScrFI	CCNGG	1 cut(s)	346
SduI	GDGCHC	6 cut(s)	297, 1036, 1257, 1436, 1507, 1791
SfaNI	GCATC	6 cut(s)	1094, 1397, 1441, 1530, 1709, 1852
SfcI	CTRYAG	1 cut(s)	1626
SfoI	GGCGCC	2 cut(s)	10, 67
SfuI	TTCGAA	1 cut(s)	390
SmlI	CTYRAG	2 cut(s)	904, 977
SmoI	CTYRAG	2 cut(s)	904, 977
SspDI	GGCGCC	2 cut(s)	8, 65
SspMI	CTAG	4 cut(s)	263, 914, 1683, 1827
SstI	GAGCTC	2 cut(s)	1036, 1791
StyD4I	CCNGG	1 cut(s)	344
StyI	CCWWGG	1 cut(s)	218
TaaI	ACNGT	6 cut(s)	378, 575, 724, 971, 1104, 1180
TaiI	ACGT	3 cut(s)	60, 803, 1217
TaqI	TCGA	5 cut(s)	150, 390, 665, 1030, 1057
TaqII	GACCGA	1 cut(s)	1751
TatI	WGTACW	2 cut(s)	1115, 1159
TauI	GCSGC	7 cut(s)	86, 124, 177, 254, 262, 287, 1457
TfiI	GAWTC	1 cut(s)	1550
Tru1I	TTAA	4 cut(s)	887, 962, 1175, 1193
Tru9I	TTAA	4 cut(s)	887, 962, 1175, 1193
TscAI	CASTG	4 cut(s)	796, 929, 1107, 1584
TseFI	GTSAC	4 cut(s)	235, 689, 1001, 1098
TseI	GCWGC	8 cut(s)	133, 279, 949, 1079, 1082, 1331, 1334, 1858
Tsp45I	GTSAC	4 cut(s)	235, 689, 1001, 1098
TspDTI	ATGAA	5 cut(s)	599, 716, 1254, 1587, 1821
TspRI	CASTG	4 cut(s)	796, 929, 1107, 1584
Tth111I	GACNNNGTC	1 cut(s)	59
XceI	RCATGY	2 cut(s)	539, 1865
XcmI	CCANNNNNNNNNTGG	2 cut(s)	349, 1033
XmiI	GTMKAC	1 cut(s)	1182
XmnI	GAANNNNTTC	1 cut(s)	1419
XspI	CTAG	4 cut(s)	263, 914, 1683, 1827
ZraI	GACGTC	1 cut(s)	58
ZrmI	AGTACT	2 cut(s)	1117, 1161
Zsp2I	ATGCAT	1 cut(s)	1702

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.