Prupe.1G323500_v2.0.a1

RING-type E3 ubiquitin transferase

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Forward (+)
30895852 .. 30898880
3029 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G323500.1

Sequence Viewer

Length: 1911 bp
ATGGCCGGCGCGGTAGCCGGCGGGGAGGACCGTACATCGGACCTGCTTCAATTACTTAACGACGTCGTAGTGGCCAGCAAAGGCTGCCGCGCCGGCTCCTTTAAGAAGGACTGCACCGATCTGGTCCGCCGGATCGCCCTCCTCACCCATTTGTTTGAAGAGATAAGGCTGTTTAAAGGCCGCGAATTTGGACCGTTGGATGCGTCCACTTCTTCCACGAATTCCAGTTCGAGAGAATCTTGGGCGTCTGATCTGGTGGTGGCTCTCCAGGGCGCCAAGCGCCTCGTTTTCCTCGCCACCAACTTTACTTCCAATTCTACCCCTTCCGTCCCCGTCAATCACAATGACGAGGCGAGCAAGAAGATAAGCTTCCAATTCCAATGTGTGACGTGGAAATTGGAGAAGGCGTTGGCCGACATACCGTACGATCAGTTCGATATCTCGGAGGAAGTTGAAGAACAGGTTGAGTTGGTTAGAGCCCAATTGAGAAGAGCCATAGAAAGATATGGGTCTGGTATGAATTCAAGAAAGATGTCATTTCATGGCCTCTCCCAGTCTCTGGTAGAGTCAGGCAAATGGGTTTACGTAGAGAACAGTGCAAAGACGATTGCCAATATTCCCAGAAGCTTTAGTGCTGAATCTGCTGATGAGATGACGATTCATAAAACCCGAAGCTTGAGCAACTCCTGTGAGCCTCCTTCACTCTGCTTGGCCAATGAAATCCAGGTTGATGGTCAGGAGGATGATATTAAGAAGCCTGATGCCACTGCAATTCCTGATGATTTTATATGCCCAATATCTCTGGAATTAATGAGGGATCCTGTTATTGTGGCCACGGGTCAGACGTACGAGAGATCTTACATACAGAGATGGATTGACTGTGGGAACACAACATGCCCCAAAACTCAGCAAAAGCTCCTATATTTGACACTAACTCCGAATTATGTTTTGAGAAGCCTGATTGCTCGGTGGTGTACTAACAACATTGAGCACCCCACCGGGTTTAGAAACGGGAAGATCAAGAAGAGTGATGGATCCTTCCGAGACATTAGTGGAGACATAGCAACCATTCAAGCCTTGGTTCGCAAGCTCTCCAGTGGATCAACTGAGGAGCGTAGAGCTGCTGCAACAGAAATTAGATCGCTGTCCAAAAGAAGTACGGATAACAGAATATTATTAGCAGAAGCAGGTGCCATACCAGTTCTGGTCAACCTCATCACAACAGAAGATGGATTAACACAAGAGAATGCGGTAACCTCCATTCTCAACCTCTCAATATATGAGAACAACAAGGGGCTTATAATGCTTGCTGGTGCTGTTCCTTCAATTGTCCAAGTCCTCAGAGCCGGAAGCATGGAAGTGAAAGAGAATGCAGCGGCAACCCTTTTTAGTTTGTCACTTGCCGATGAGAACAAGATAATAATTGGTGCGTCCGGGGCAATTCCTGCTTTGGTGGAGTTGCTTCAGAATGGGAGCACCAGAGGGAAGAAGGATGCTGCAACAGCACTGTTCAATTTGTGCATTTATCAAGGTAACAAAGGCAGGGCTGTTCGGGCAGGGATTGTCAAACCCTTACTGAAGATGCTTACTGATTCAAGCAATTGTATGGTTGATGAAGCTCTGACTATTATGTCTGTCCTTGCTAACCACCAAGAGGCCAAAGTCACTATAGTGAAGGCTGGCACCATACCTGTTCTGATAGACCTTTTGCGAAGAGGTCTGCCTCGTAACAAAGAGAATGCAACTGCCATTTTACTTGCCTTGTGCAAGAGAGATACCGAGAGCCTTGCCTGTATAAGTAGGCTTGGTGCAATCGTACCCTTGACAGAGCTCACGAAGAGCGGCACAGAGAGGGCCAAACGGAAGGCTACTTCATTGTTGGTGCATCTTCGAAAATTACAGCAGCTATGA

Protein Analysis

637

Amino Acids

69.45

Weight (kDa)

8.65

Isoelectric Point (pI)

42.59

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0012227)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1301
AarI CACCTGC 1 cut(s) 1178
AasI GACNNNNNNGTC 1 cut(s) 1630
AatII GACGTC 1 cut(s) 66
Acc36I ACCTGC 2 cut(s) 51, 1178
AccB1I GGYRCC 3 cut(s) 272, 1190, 1682
AccB7I CCANNNNNTGG 1 cut(s) 559
AccBSI CCGCTC 1 cut(s) 1842
AccII CGCG 3 cut(s) 11, 90, 183
AciI CCGC 8 cut(s) 11, 21, 88, 127, 181, 1250, 1376, 1842
AclWI GGATC 6 cut(s) 140, 812, 825, 1029, 1042, 1108
AcoI YGGCCR 5 cut(s) 3, 72, 411, 711, 831
AcsI RAATTY 3 cut(s) 185, 220, 520
AcuI CTGAAG 2 cut(s) 1448, 1598
AcyI GRCGYC 3 cut(s) 63, 245, 273
AfaI GTAC 6 cut(s) 34, 425, 848, 976, 1159, 1818
AfiI CCNNNNNNNGG 3 cut(s) 37, 559, 1654
AgsI TTSAA 8 cut(s) 50, 158, 455, 525, 1073, 1326, 1513, 1596
AjiI CACGTC 1 cut(s) 390
AjnI CCWGG 2 cut(s) 267, 723
AleI CACNNNNGTG 1 cut(s) 1670
AluBI AGCT 9 cut(s) 369, 627, 675, 916, 1090, 1121, 1619, 1831, 1906
AluI AGCT 9 cut(s) 369, 627, 675, 916, 1090, 1121, 1619, 1831, 1906
Alw21I GWGCWC 3 cut(s) 993, 1478, 1833
Alw26I GTCTC 3 cut(s) 561, 1038, 1050
AlwI GGATC 6 cut(s) 140, 812, 825, 1029, 1042, 1108
AlwNI CAGNNNCTG 1 cut(s) 559
AoxI GGCC 9 cut(s) 3, 72, 178, 411, 544, 711, 831, 1656, 1854
ApeKI GCWGC 6 cut(s) 84, 1121, 1124, 1373, 1496, 1903
ApoI RAATTY 3 cut(s) 185, 220, 520
AseI ATTAAT 1 cut(s) 809
AspLEI GCGC 4 cut(s) 11, 92, 275, 282
AspS9I GGNCC 5 cut(s) 28, 40, 124, 191, 1854
AsuC2I CCSGG 2 cut(s) 1000, 1435
AsuHPI GGTGA 1 cut(s) 136
AsuII TTCGAA 1 cut(s) 1891
AvaII GGWCC 4 cut(s) 28, 40, 124, 191
BalI TGGCCA 3 cut(s) 74, 713, 833
BamHI GGATCC 2 cut(s) 817, 1034
BanI GGYRCC 3 cut(s) 272, 1190, 1682
BanII GRGCYC 2 cut(s) 481, 1833
Bbv12I GWGCWC 3 cut(s) 993, 1478, 1833
BbvI GCAGC 5 cut(s) 71, 1108, 1111, 1385, 1483
BccI CCATC 4 cut(s) 725, 864, 1025, 1223
BcgI CGANNNNNNTGC 2 cut(s) 1769, 1803
BciT130I CCWGG 2 cut(s) 269, 725
BcnI CCSGG 2 cut(s) 1000, 1435
BcoDI GTCTC 3 cut(s) 561, 1038, 1050
BfmI CTRYAG 1 cut(s) 1668
BfoI RGCGCY 2 cut(s) 276, 283
BfuAI ACCTGC 2 cut(s) 51, 1178
BglI GCCNNNNNGGC 1 cut(s) 93
BglII AGATCT 1 cut(s) 854
Bme1390I CCNGG 4 cut(s) 269, 725, 1000, 1435
Bme18I GGWCC 4 cut(s) 28, 40, 124, 191
BmgBI CACGTC 1 cut(s) 390
BmgT120I GGNCC 5 cut(s) 28, 40, 124, 191, 1854
BmiI GGNNCC 6 cut(s) 97, 274, 819, 1036, 1192, 1684
BmrFI CCNGG 4 cut(s) 269, 725, 1000, 1435
BmrI ACTGGG 1 cut(s) 547
BmsI GCATC 5 cut(s) 190, 751, 1483, 1572, 1894
BmuI ACTGGG 1 cut(s) 547
BpmI CTGGAG 2 cut(s) 251, 1078
Bpu14I TTCGAA 1 cut(s) 1891
BpuEI CTTGAG 1 cut(s) 697
BpuMI CCSGG 2 cut(s) 1000, 1435
BsaAI YACGTR 1 cut(s) 586
BsaHI GRCGYC 3 cut(s) 63, 245, 273
BsaJI CCNNGG 4 cut(s) 268, 834, 1077, 1434
BsaXI ACNNNNNCTCC 4 cut(s) 392, 422, 919, 949
Bsc4I CCNNNNNNNGG 3 cut(s) 37, 559, 1654
Bse118I RCCGGY 3 cut(s) 5, 17, 92
Bse1I ACTGG 4 cut(s) 225, 553, 1095, 1199
BseBI CCWGG 2 cut(s) 269, 725
BseDI CCNNGG 4 cut(s) 268, 834, 1077, 1434
BseGI GGATG 3 cut(s) 205, 748, 1498
BseLI CCNNNNNNNGG 3 cut(s) 37, 559, 1654
BseMII CTCAG 3 cut(s) 920, 1098, 1354
BseNI ACTGG 4 cut(s) 225, 553, 1095, 1199
BseRI GAGGAG 2 cut(s) 131, 1124
BseXI GCAGC 5 cut(s) 71, 1108, 1111, 1385, 1483
BsgI GTGCAG 1 cut(s) 97
Bsh1236I CGCG 3 cut(s) 11, 90, 183
BshFI GGCC 9 cut(s) 5, 74, 180, 413, 546, 713, 833, 1658, 1856
BshNI GGYRCC 3 cut(s) 272, 1190, 1682
BsiHKAI GWGCWC 3 cut(s) 993, 1478, 1833
BsiSI CCGG 7 cut(s) 6, 18, 93, 130, 999, 1347, 1434
BsiWI CGTACG 2 cut(s) 423, 846
BslFI GGGAC 1 cut(s) 314
BslI CCNNNNNNNGG 3 cut(s) 37, 559, 1654
BsmAI GTCTC 3 cut(s) 561, 1038, 1050
BsmFI GGGAC 1 cut(s) 314
BsmI GAATGC 3 cut(s) 1252, 1375, 1744
BsnI GGCC 9 cut(s) 5, 74, 180, 413, 546, 713, 833, 1658, 1856
Bsp119I TTCGAA 1 cut(s) 1891
Bsp1286I GDGCHC 4 cut(s) 481, 993, 1478, 1833
BspACI CCGC 8 cut(s) 11, 21, 88, 127, 181, 1250, 1376, 1842
BspANI GGCC 9 cut(s) 5, 74, 180, 413, 546, 713, 833, 1658, 1856
BspCNI CTCAG 3 cut(s) 919, 1099, 1353
BspFNI CGCG 3 cut(s) 11, 90, 183
BspLI GGNNCC 6 cut(s) 97, 274, 819, 1036, 1192, 1684
BspMI ACCTGC 2 cut(s) 51, 1178
BspPI GGATC 6 cut(s) 140, 812, 825, 1029, 1042, 1108
BspQI GCTCTTC 2 cut(s) 484, 1832
BspT104I TTCGAA 1 cut(s) 1891
BspT107I GGYRCC 3 cut(s) 272, 1190, 1682
BsrBI CCGCTC 1 cut(s) 1842
BsrFI RCCGGY 3 cut(s) 5, 17, 92
BsrI ACTGG 4 cut(s) 225, 553, 1095, 1199
BssAI RCCGGY 3 cut(s) 5, 17, 92
BssECI CCNNGG 4 cut(s) 268, 834, 1077, 1434
BssNI GRCGYC 3 cut(s) 63, 245, 273
BssT1I CCWWGG 1 cut(s) 1077
Bst2UI CCWGG 2 cut(s) 269, 725
Bst4CI ACNGT 6 cut(s) 32, 195, 423, 596, 881, 1509
Bst6I CTCTTC 5 cut(s) 153, 484, 1019, 1708, 1832
BstACI GRCGYC 3 cut(s) 63, 245, 273
BstAPI GCANNNNNTGC 2 cut(s) 84, 1445
BstBAI YACGTR 1 cut(s) 586
BstBI TTCGAA 1 cut(s) 1891
BstC8I GCNNGC 8 cut(s) 7, 19, 76, 94, 355, 1088, 1308, 1681
BstDEI CTNAG 3 cut(s) 906, 1107, 1340
BstDSI CCRYGG 1 cut(s) 834
BstEII GGTNACC 1 cut(s) 1252
BstF5I GGATG 3 cut(s) 205, 748, 1498
BstFNI CGCG 3 cut(s) 11, 90, 183
BstH2I RGCGCY 2 cut(s) 276, 283
BstHHI GCGC 4 cut(s) 11, 92, 275, 282
BstMAI GTCTC 3 cut(s) 561, 1038, 1050
BstMWI GCNNNNNNNGC 9 cut(s) 84, 93, 279, 641, 1303, 1436, 1445, 1502, 1553
BstNI CCWGG 2 cut(s) 269, 725
BstNSI RCATGY 1 cut(s) 897
BstPI GGTNACC 1 cut(s) 1252
BstSCI CCNGG 4 cut(s) 267, 723, 998, 1433
BstSFI CTRYAG 1 cut(s) 1668
BstSNI TACGTA 1 cut(s) 586
BstUI CGCG 3 cut(s) 11, 90, 183
BstV1I GCAGC 5 cut(s) 71, 1108, 1111, 1385, 1483
BstX2I RGATCY 3 cut(s) 817, 854, 1034
BstXI CCANNNNNNTGG 1 cut(s) 731
BstYI RGATCY 3 cut(s) 817, 854, 1034
BsuRI GGCC 9 cut(s) 5, 74, 180, 413, 546, 713, 833, 1658, 1856
BtgI CCRYGG 1 cut(s) 834
BtrI CACGTC 1 cut(s) 390
BtsCI GGATG 3 cut(s) 205, 748, 1498
BtsI GCAGTG 1 cut(s) 765
BtsIMutI CAGTG 4 cut(s) 601, 765, 1102, 1505
BveI ACCTGC 2 cut(s) 51, 1178
Cac8I GCNNGC 8 cut(s) 7, 19, 76, 94, 355, 1088, 1308, 1681
CaiI CAGNNNCTG 1 cut(s) 559
CfoI GCGC 4 cut(s) 11, 92, 275, 282
Cfr10I RCCGGY 3 cut(s) 5, 17, 92
Cfr13I GGNCC 5 cut(s) 28, 40, 124, 191, 1854
CseI GACGC 3 cut(s) 192, 234, 1419
Csp6I GTAC 6 cut(s) 33, 424, 847, 975, 1158, 1817
CviAII CATG 3 cut(s) 542, 894, 1354
CviQI GTAC 6 cut(s) 33, 424, 847, 975, 1158, 1817
DdeI CTNAG 3 cut(s) 906, 1107, 1340
DinI GGCGCC 1 cut(s) 274
DraI TTTAAA 1 cut(s) 175
DrdI GACNNNNNNGTC 1 cut(s) 1630
DseDI GACNNNNNNGTC 1 cut(s) 1630
EaeI YGGCCR 5 cut(s) 3, 72, 411, 711, 831
Eam1104I CTCTTC 5 cut(s) 153, 484, 1019, 1708, 1832
EarI CTCTTC 5 cut(s) 153, 484, 1019, 1708, 1832
EciI GGCGGA 1 cut(s) 116
Ecl136II GAGCTC 1 cut(s) 1831
Eco105I TACGTA 1 cut(s) 586
Eco130I CCWWGG 1 cut(s) 1077
Eco24I GRGCYC 2 cut(s) 481, 1833
Eco32I GATATC 1 cut(s) 439
Eco47I GGWCC 4 cut(s) 28, 40, 124, 191
Eco53kI GAGCTC 1 cut(s) 1831
Eco57I CTGAAG 2 cut(s) 1448, 1598
Eco91I GGTNACC 1 cut(s) 1252
EcoICRI GAGCTC 1 cut(s) 1831
EcoO65I GGTNACC 1 cut(s) 1252
EcoRI GAATTC 2 cut(s) 220, 520
EcoRII CCWGG 2 cut(s) 267, 723
EcoRV GATATC 1 cut(s) 439
EcoT14I CCWWGG 1 cut(s) 1077
EcoT38I GRGCYC 2 cut(s) 481, 1833
EgeI GGCGCC 1 cut(s) 274
EheI GGCGCC 1 cut(s) 274
ErhI CCWWGG 1 cut(s) 1077
FaeI CATG 3 cut(s) 545, 897, 1357
FalI AAGNNNNNCTT 2 cut(s) 353, 385
FaqI GGGAC 1 cut(s) 314
FatI CATG 3 cut(s) 541, 893, 1353
FauI CCCGC 1 cut(s) 14
FokI GGATG 3 cut(s) 212, 755, 1505
FriOI GRGCYC 2 cut(s) 481, 1833
GlaI GCGC 4 cut(s) 10, 91, 274, 281
GsuI CTGGAG 2 cut(s) 251, 1078
HaeII RGCGCY 2 cut(s) 276, 283
HaeIII GGCC 9 cut(s) 5, 74, 180, 413, 546, 713, 833, 1658, 1856
HapII CCGG 7 cut(s) 6, 18, 93, 130, 999, 1347, 1434
HgaI GACGC 3 cut(s) 192, 234, 1419
HhaI GCGC 4 cut(s) 11, 92, 275, 282
Hin1I GRCGYC 3 cut(s) 63, 245, 273
Hin1II CATG 3 cut(s) 545, 897, 1357
Hin6I GCGC 4 cut(s) 9, 90, 273, 280
HinP1I GCGC 4 cut(s) 9, 90, 273, 280
HincII GTYRAC 1 cut(s) 1210
HindII GTYRAC 1 cut(s) 1210
HindIII AAGCTT 3 cut(s) 367, 625, 673
HinfI GANTC 5 cut(s) 236, 566, 638, 658, 1592
HpaII CCGG 7 cut(s) 6, 18, 93, 130, 999, 1347, 1434
HphI GGTGA 1 cut(s) 136
Hpy166II GTNNAC 4 cut(s) 207, 583, 975, 1210
Hpy188III TCNNGA 7 cut(s) 231, 525, 737, 776, 803, 1021, 1834
Hpy8I GTNNAC 4 cut(s) 207, 583, 975, 1210
Hpy99I CGWCG 2 cut(s) 65, 68
HpyAV CCTTC 9 cut(s) 100, 333, 397, 708, 1048, 1332, 1483, 1669, 1858
HpyCH4III ACNGT 6 cut(s) 32, 195, 423, 596, 881, 1509
HpyCH4IV ACGT 4 cut(s) 63, 389, 585, 845
HpyF10VI GCNNNNNNNGC 9 cut(s) 84, 93, 279, 641, 1303, 1436, 1445, 1502, 1553
HpyF3I CTNAG 3 cut(s) 906, 1107, 1340
HpySE526I ACGT 4 cut(s) 63, 389, 585, 845
Hsp92I GRCGYC 3 cut(s) 63, 245, 273
Hsp92II CATG 3 cut(s) 545, 897, 1357
HspAI GCGC 4 cut(s) 9, 90, 273, 280
KasI GGCGCC 1 cut(s) 272
KroI GCCGGC 3 cut(s) 5, 17, 92
KroNI GCCGGC 3 cut(s) 7, 19, 94
LguI GCTCTTC 2 cut(s) 484, 1832
LmnI GCTCC 4 cut(s) 101, 921, 1111, 1473
Lsp1109I GCAGC 5 cut(s) 71, 1108, 1111, 1385, 1483
LweI GCATC 5 cut(s) 190, 751, 1483, 1572, 1894
MaeII ACGT 4 cut(s) 63, 389, 585, 845
MaeIII GTNAC 6 cut(s) 385, 1252, 1395, 1532, 1663, 1727
MbiI CCGCTC 1 cut(s) 1842
MfeI CAATTG 3 cut(s) 482, 1326, 1600
MflI RGATCY 3 cut(s) 817, 854, 1034
MhlI GDGCHC 4 cut(s) 481, 993, 1478, 1833
MlsI TGGCCA 3 cut(s) 74, 713, 833
MluNI TGGCCA 3 cut(s) 74, 713, 833
Mly113I GGCGCC 1 cut(s) 273
MlyI GAGTC 1 cut(s) 575
MmeI TCCRAC 1 cut(s) 177
Mox20I TGGCCA 3 cut(s) 74, 713, 833
MroNI GCCGGC 3 cut(s) 5, 17, 92
MscI TGGCCA 3 cut(s) 74, 713, 833
MseI TTAA 6 cut(s) 57, 102, 174, 750, 809, 1235
MslI CAYNNNNRTG 2 cut(s) 1358, 1670
Msp20I TGGCCA 3 cut(s) 74, 713, 833
MspA1I CMGCKG 1 cut(s) 1376
MspI CCGG 7 cut(s) 6, 18, 93, 130, 999, 1347, 1434
MspR9I CCNGG 4 cut(s) 269, 725, 1000, 1435
MunI CAATTG 3 cut(s) 482, 1326, 1600
Mva1269I GAATGC 3 cut(s) 1252, 1375, 1744
MvaI CCWGG 2 cut(s) 269, 725
MvnI CGCG 3 cut(s) 11, 90, 183
MwoI GCNNNNNNNGC 9 cut(s) 84, 93, 279, 641, 1303, 1436, 1445, 1502, 1553
NaeI GCCGGC 3 cut(s) 7, 19, 94
NarI GGCGCC 1 cut(s) 273
NciI CCSGG 2 cut(s) 1000, 1435
NgoMIV GCCGGC 3 cut(s) 5, 17, 92
NlaIII CATG 3 cut(s) 545, 897, 1357
NlaIV GGNNCC 6 cut(s) 97, 274, 819, 1036, 1192, 1684
NmuCI GTSAC 3 cut(s) 385, 1395, 1663
NspI RCATGY 1 cut(s) 897
NspV TTCGAA 1 cut(s) 1891
OliI CACNNNNGTG 1 cut(s) 1670
PaqCI CACCTGC 1 cut(s) 1178
PciSI GCTCTTC 2 cut(s) 484, 1832
PcsI WCGNNNNNNNCGW 2 cut(s) 432, 842
PctI GAATGC 3 cut(s) 1252, 1375, 1744
PdiI GCCGGC 3 cut(s) 7, 19, 94
PfeI GAWTC 4 cut(s) 236, 638, 658, 1592
Pfl23II CGTACG 2 cut(s) 423, 846
PflMI CCANNNNNTGG 1 cut(s) 559
PleI GAGTC 1 cut(s) 574
PluTI GGCGCC 1 cut(s) 276
PpsI GAGTC 1 cut(s) 574
Ppu21I YACGTR 1 cut(s) 586
PshBI ATTAAT 1 cut(s) 809
PsiI TTATAA 1 cut(s) 1301
Psp124BI GAGCTC 1 cut(s) 1833
Psp6I CCWGG 2 cut(s) 267, 723
PspEI GGTNACC 1 cut(s) 1252
PspGI CCWGG 2 cut(s) 267, 723
PspLI CGTACG 2 cut(s) 423, 846
PspN4I GGNNCC 6 cut(s) 97, 274, 819, 1036, 1192, 1684
PspPI GGNCC 5 cut(s) 28, 40, 124, 191, 1854
PsrI GAACNNNNNNTAC 2 cut(s) 416, 448
PstNI CAGNNNCTG 1 cut(s) 559
PsuI RGATCY 3 cut(s) 817, 854, 1034
RsaI GTAC 6 cut(s) 34, 425, 848, 976, 1159, 1818
RsaNI GTAC 6 cut(s) 33, 424, 847, 975, 1158, 1817
RseI CAYNNNNRTG 2 cut(s) 1358, 1670
SacI GAGCTC 1 cut(s) 1833
SapI GCTCTTC 2 cut(s) 484, 1832
SaqAI TTAA 6 cut(s) 57, 102, 174, 750, 809, 1235
Sau96I GGNCC 5 cut(s) 28, 40, 124, 191, 1854
SchI GAGTC 1 cut(s) 575
ScrFI CCNGG 4 cut(s) 269, 725, 1000, 1435
SduI GDGCHC 4 cut(s) 481, 993, 1478, 1833
SfaNI GCATC 5 cut(s) 190, 751, 1483, 1572, 1894
SfcI CTRYAG 1 cut(s) 1668
SfoI GGCGCC 1 cut(s) 274
SfuI TTCGAA 1 cut(s) 1891
SinI GGWCC 4 cut(s) 28, 40, 124, 191
SmiMI CAYNNNNRTG 2 cut(s) 1358, 1670
SmlI CTYRAG 1 cut(s) 676
SmoI CTYRAG 1 cut(s) 676
SnaBI TACGTA 1 cut(s) 586
SsiI CCGC 8 cut(s) 11, 21, 88, 127, 181, 1250, 1376, 1842
SspDI GGCGCC 1 cut(s) 272
SspI AATATT 2 cut(s) 616, 1173
SstI GAGCTC 1 cut(s) 1833
StyD4I CCNGG 4 cut(s) 267, 723, 998, 1433
StyI CCWWGG 1 cut(s) 1077
TaaI ACNGT 6 cut(s) 32, 195, 423, 596, 881, 1509
TaiI ACGT 4 cut(s) 66, 392, 588, 848
TaqI TCGA 3 cut(s) 230, 435, 1891
TatI WGTACW 1 cut(s) 974
TauI GCSGC 4 cut(s) 90, 183, 1379, 1845
TfiI GAWTC 4 cut(s) 236, 638, 658, 1592
Tru1I TTAA 6 cut(s) 57, 102, 174, 750, 809, 1235
Tru9I TTAA 6 cut(s) 57, 102, 174, 750, 809, 1235
TscAI CASTG 4 cut(s) 601, 772, 1102, 1512
TseFI GTSAC 3 cut(s) 385, 1395, 1663
TseI GCWGC 6 cut(s) 84, 1121, 1124, 1373, 1496, 1903
Tsp45I GTSAC 3 cut(s) 385, 1395, 1663
TspDTI ATGAA 6 cut(s) 530, 533, 650, 732, 1629, 1863
TspGWI ACGGA 3 cut(s) 316, 1175, 1876
TspRI CASTG 4 cut(s) 601, 772, 1102, 1512
Van91I CCANNNNNTGG 1 cut(s) 559
VpaK11BI GGWCC 4 cut(s) 28, 40, 124, 191
VspI ATTAAT 1 cut(s) 809
XapI RAATTY 3 cut(s) 185, 220, 520
XceI RCATGY 1 cut(s) 897
XcmI CCANNNNNNNNNTGG 2 cut(s) 1075, 1201
ZraI GACGTC 1 cut(s) 64
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.