Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr16

Orthogroup ID

OG0012227

Physical Location & Seq

Genomic Coordinates Reverse (-)

2089197 .. 2092068

Gene Structure 2872 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD16G1029300.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1890 bp

ATGGCCGGAGCAGTAGCCGGCGGCATCGACCGTACATCGGAGCTACTGCAATTACTCAACGACGTCGTTGGTGCGAGCAAGTTCGGCGGCGGCGTTACCGGTATGTTTAAGAAGGACTGCACCGATCTGGTCCGGCGGATCGCCCTGCTGACGCATTTGTTCGAAGAGATAAGGGTGTTTAAAGGCAGTGAATTTGGACCGTTGGATGCGTCGACTTCTTCCAAGAATTCTGGTCCGACGGAATCCTGGGTGTCTGATCTGGTGGTCGCCCTCCAGGCCGCCAAGAGCCTCGTTTTGCTTGCTTCCAACTTCACTTCCAATTTTGCCCCTCCCCCTGTCCCCGCCAATCACAATGACGAAGCGAGCAAGAAGATAAGCTTCCAGTTCCAATGCGTGACGTGGAAATTGGAGAAGGCGTTGGGCGACATACCGTTCGACCAGTTCGACATCTCCGAGGAAGTTGAAGAACAGGTTGAATTGGTTACAGCCCAGTTGAGAAGAGCGATAGAAAGATATGAGTTTTCCATGAAAGGGAGAACGATGTCGTTTGATTGCCTCTCCCAGTCTCTGGTGGAGTCTGGAAAATGGGTGTATGTAGAGAACAATGCAAAGACGATTGGCAATATTCCCAGAAGCTTTAGTGCTGATTCTACTGACGAGATGGTGATTCGTAAAACCGAAACCTTTCGTGCTGTTGACTCTGCTGATGACATCCATGTTGACGATCATGGCGATATCAAGAAGCCTGATGCCAATTCATCTGCAATTCCTGACGATTTTATTTGCCCAATATCTTTGGAACTCATGAGGGATCCTGTTATTGTGGCCACGGGTCAGACGTATGAGAGATCTTGCATACAGAGATGGGTGGATTGTGGGAACACAACATGTCCGAAAACTCAGCAAAAGCTGCTGAATTTGACACTAACTCCGAACTATGTTTTGAGAAGTTTGATTGCTCAGTGGTGTATTAACAACAATATAGAGCAGCCCGCCGGGAAGATTAAGAAGAGTGATGGATCATTCCGTGACATTACTGGGGACATAGTGACGATCCAAGCCTTGGTTCGCAAGCTCTCCAGTCGATCAATTGAGGAGCACAGAGCTGCTGTAGCTGAGATTCGATCACTGTCCAAAAGAAACACTGATAACAGAATACTAATTGCGGAAGCGGGTGCCATACCAGTTCTGGTCAACCTATTAACATCAGAAGATGGACTAACGCAAGAGAATGCAGTAACTTCCGTCCTCAACCTCTCAATATATGACAATAACAAGGGGCTTATAATGCTTGCCGGTGCTGTTCCTTCCATTGTCCAAGTCCTCAGAGCCGGAAGCATGGAAACAAAAGAGAATGCAGCAGCAACCCTTTTTAGTTTGTCACTTGCTGATGAGAACAAGATAATAATCGGAGCATCCGGGGCAATTCCTGCATTGGTAGAGTTGCTTCAAAATGGGAGCACCAGAGGGAAGAAGGATGCTTCAACGGCATTGTTCAATTTGTGCATTTATCAGGGCAACAAAGGCAGGGCTATCCGTGCGGGGATAGTCACAGCCTTACTCAAGATGCTAACTGATTCGAGCATGATCGATGAAGCACTGACTATCATGTCAGTTCTTGCTAACCACCAAGAGGCAAAAGTCGCCATAGTAAAGGCAGGCACCATACCTGTTTTGATAGACCTTTTGCGAAGAGGTCTGCCTCGTAACAAAGAGAACGCAGCTGCCATTTTACTTGCCTTGTGCAAGAGAGACAAAGAGAGCCTCGCCTGCATAAGTAGGCTTGGTGCGGTGATACCCTTGACAGAGCTCGTTAGGAGCGGCACGGTGAGGGCCAAACGGAAGGCAACTTCGTTGTTGGAGCATCTTCAAAAAGTACAGCAGCTATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004842 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009966 GO:0009987 GO:0010033 GO:0010200 GO:0010243 GO:0010646 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0023051 GO:0031647 GO:0031648 GO:0032446 GO:0036211 GO:0042221 GO:0042493 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043621 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0048583 GO:0050789 GO:0050794 GO:0050896 GO:0051865 GO:0065007 GO:0065008 GO:0070647 GO:0071704 GO:0140096 GO:1901564 GO:1901698 GO:1901700 GO:2000022

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Arm U-box

Protein Analysis

630

Amino Acids

68.38

Weight (kDa)

6.7

Isoelectric Point (pI)

39.17

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PUB10_N	PF25368	37 - 168	1.4e-41	PUB10-like, N-terminal domain
U-box	PF04564	256 - 326	1.1e-19	U-box domain
ARM_PUB	PF25598	352 - 625	4.2e-24	Plant U-box protein ARM repeat region
ARM_ARMC5	PF24768	352 - 529	4e-10	ARMC5
Arm	PF00514	381 - 420	1.6e-08	Armadillo/beta-catenin-like repeat
Arm	PF00514	464 - 502	4.8e-08	Armadillo/beta-catenin-like repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012227)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G23030 AT1G71020 AT1G71020
fragaria_vesca	FvH4_4g32300
malus_domestica	MD13G1026300.v1.1 MD16G1029300.v1.1
prunus_persica	Prupe.1G323500_v2.0.a1
pyrus_communis	pycom16g02520
rosa_chinensis	RchiOBHm_Chr4g0441091
rosa_laevigata	RLG00000006115
rosa_multiflora	Rmu_co8350821.1_g000001 Rmu_sc0006317.1_g000015
rosa_roxburghii	Rroxscaffold_5G00382050
rosa_rugosa	Rorug04G0331000
rosa_samantha	Rh4AG382600 Rh4BG396400 Rh4CG411500 Rh4DG389200
rosa_wichuraiana	Rw4G033020

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1286
AasI	GACNNNNNNGTC	1 cut(s)	1609
AatII	GACGTC	1 cut(s)	66
AccB1I	GGYRCC	2 cut(s)	1175, 1661
AccB7I	CCANNNNNTGG	2 cut(s)	568, 1063
AccBSI	CCGCTC	1 cut(s)	1821
AccI	GTMKAC	1 cut(s)	212
AclWI	GGATC	5 cut(s)	146, 806, 819, 1027, 1048
AcoI	YGGCCR	2 cut(s)	3, 825
AcsI	RAATTY	3 cut(s)	191, 226, 916
AcyI	GRCGYC	1 cut(s)	63
AfaI	GTAC	2 cut(s)	34, 1878
AfiI	CCNNNNNNNGG	5 cut(s)	37, 531, 568, 1063, 1633
AflIII	ACRYGT	1 cut(s)	887
AgeI	ACCGGT	1 cut(s)	98
AgsI	TTSAA	6 cut(s)	464, 476, 1451, 1485, 1498, 1871
AjiI	CACGTC	1 cut(s)	399
AjnI	CCWGG	2 cut(s)	245, 273
AjuI	GAANNNNNNNTTGG	2 cut(s)	1050, 1082
Alw21I	GWGCWC	3 cut(s)	1101, 1463, 1812
Alw26I	GTCTC	2 cut(s)	570, 1746
AlwI	GGATC	5 cut(s)	146, 806, 819, 1027, 1048
AlwNI	CAGNNNCTG	1 cut(s)	568
AoxI	GGCC	4 cut(s)	3, 276, 825, 1833
ApeKI	GCWGC	8 cut(s)	910, 988, 1106, 1358, 1361, 1721, 1724, 1882
ApoI	RAATTY	3 cut(s)	191, 226, 916
ArsI	GACNNNNNNTTYG	2 cut(s)	416, 448
AsiGI	ACCGGT	1 cut(s)	98
Asp700I	GAANNNNTTC	1 cut(s)	684
AspS9I	GGNCC	4 cut(s)	130, 197, 233, 1833
AsuC2I	CCSGG	2 cut(s)	997, 1420
AsuHPI	GGTGA	3 cut(s)	676, 1804, 1840
AsuII	TTCGAA	1 cut(s)	162
AvaII	GGWCC	3 cut(s)	130, 197, 233
BalI	TGGCCA	1 cut(s)	827
BamHI	GGATCC	1 cut(s)	811
BanI	GGYRCC	2 cut(s)	1175, 1661
BanII	GRGCYC	1 cut(s)	1812
BarI	GAAGNNNNNNTAC	2 cut(s)	1431, 1463
Bbv12I	GWGCWC	3 cut(s)	1101, 1463, 1812
BbvI	GCAGC	7 cut(s)	897, 1000, 1093, 1370, 1373, 1711, 1733
BccI	CCATC	4 cut(s)	655, 858, 1010, 1208
BceAI	ACGGC	1 cut(s)	1503
BciT130I	CCWGG	2 cut(s)	247, 275
BcnI	CCSGG	2 cut(s)	997, 1420
BcoDI	GTCTC	2 cut(s)	570, 1746
BfmI	CTRYAG	1 cut(s)	1110
BglI	GCCNNNNNGGC	1 cut(s)	275
BglII	AGATCT	1 cut(s)	848
Bme1390I	CCNGG	4 cut(s)	247, 275, 997, 1420
Bme18I	GGWCC	3 cut(s)	130, 197, 233
BmgBI	CACGTC	1 cut(s)	399
BmgT120I	GGNCC	4 cut(s)	130, 197, 233, 1833
BmiI	GGNNCC	3 cut(s)	813, 1177, 1663
BmrFI	CCNGG	4 cut(s)	247, 275, 997, 1420
BmrI	ACTGGG	3 cut(s)	484, 556, 1047
BmsI	GCATC	7 cut(s)	33, 196, 739, 1424, 1468, 1557, 1873
BmuI	ACTGGG	3 cut(s)	484, 556, 1047
BpmI	CTGGAG	2 cut(s)	257, 1063
Bpu14I	TTCGAA	1 cut(s)	162
BpuEI	CTTGAG	1 cut(s)	1547
BpuMI	CCSGG	2 cut(s)	997, 1420
Bsa29I	ATCGAT	1 cut(s)	1590
BsaBI	GATNNNNATC	1 cut(s)	1406
BsaHI	GRCGYC	1 cut(s)	63
BsaJI	CCNNGG	5 cut(s)	246, 453, 828, 1062, 1419
BsaWI	WCCGGW	1 cut(s)	98
BsaXI	ACNNNNNCTCC	4 cut(s)	401, 431, 913, 943
Bsc4I	CCNNNNNNNGG	5 cut(s)	37, 531, 568, 1063, 1633
Bse118I	RCCGGY	3 cut(s)	17, 98, 1295
Bse1I	ACTGG	7 cut(s)	382, 439, 490, 562, 1042, 1080, 1184
Bse8I	GATNNNNATC	1 cut(s)	1406
BseBI	CCWGG	2 cut(s)	247, 275
BseCI	ATCGAT	1 cut(s)	1590
BseDI	CCNNGG	5 cut(s)	246, 453, 828, 1062, 1419
BseGI	GGATG	4 cut(s)	211, 711, 1415, 1483
BseJI	GATNNNNATC	1 cut(s)	1406
BseLI	CCNNNNNNNGG	5 cut(s)	37, 531, 568, 1063, 1633
BseMII	CTCAG	4 cut(s)	914, 974, 1107, 1339
BseNI	ACTGG	7 cut(s)	382, 439, 490, 562, 1042, 1080, 1184
BseRI	GAGGAG	1 cut(s)	1109
BseXI	GCAGC	7 cut(s)	897, 1000, 1093, 1370, 1373, 1711, 1733
BsgI	GTGCAG	1 cut(s)	103
Bsh1285I	CGRYCG	1 cut(s)	31
BshFI	GGCC	4 cut(s)	5, 278, 827, 1835
BshNI	GGYRCC	2 cut(s)	1175, 1661
BshTI	ACCGGT	1 cut(s)	98
BshVI	ATCGAT	1 cut(s)	1590
BsiEI	CGRYCG	1 cut(s)	31
BsiHKAI	GWGCWC	3 cut(s)	1101, 1463, 1812
BsiSI	CCGG	8 cut(s)	6, 18, 99, 133, 996, 1296, 1332, 1419
BslFI	GGGAC	2 cut(s)	323, 1055
BslI	CCNNNNNNNGG	5 cut(s)	37, 531, 568, 1063, 1633
BsmAI	GTCTC	2 cut(s)	570, 1746
BsmFI	GGGAC	2 cut(s)	323, 1055
BsmI	GAATGC	2 cut(s)	1237, 1360
BsnI	GGCC	4 cut(s)	5, 278, 827, 1835
Bsp119I	TTCGAA	1 cut(s)	162
Bsp1286I	GDGCHC	3 cut(s)	1101, 1463, 1812
BspANI	GGCC	4 cut(s)	5, 278, 827, 1835
BspCNI	CTCAG	4 cut(s)	913, 973, 1108, 1338
BspDI	ATCGAT	1 cut(s)	1590
BspHI	TCATGA	1 cut(s)	804
BspLI	GGNNCC	3 cut(s)	813, 1177, 1663
BspPI	GGATC	5 cut(s)	146, 806, 819, 1027, 1048
BspQI	GCTCTTC	1 cut(s)	493
BspT104I	TTCGAA	1 cut(s)	162
BspT107I	GGYRCC	2 cut(s)	1175, 1661
BsrBI	CCGCTC	1 cut(s)	1821
BsrFI	RCCGGY	3 cut(s)	17, 98, 1295
BsrI	ACTGG	7 cut(s)	382, 439, 490, 562, 1042, 1080, 1184
BssAI	RCCGGY	3 cut(s)	17, 98, 1295
BssECI	CCNNGG	5 cut(s)	246, 453, 828, 1062, 1419
BssNI	GRCGYC	1 cut(s)	63
BssT1I	CCWWGG	1 cut(s)	1062
Bst2UI	CCWGG	2 cut(s)	247, 275
Bst4CI	ACNGT	5 cut(s)	32, 201, 432, 1131, 1828
Bst6I	CTCTTC	4 cut(s)	159, 493, 1004, 1687
BstACI	GRCGYC	1 cut(s)	63
BstAPI	GCANNNNNTGC	2 cut(s)	910, 1430
BstBI	TTCGAA	1 cut(s)	162
BstC8I	GCNNGC	9 cut(s)	19, 76, 300, 364, 993, 1073, 1293, 1660, 1771
BstDEI	CTNAG	4 cut(s)	900, 960, 1116, 1325
BstDSI	CCRYGG	1 cut(s)	828
BstF5I	GGATG	4 cut(s)	211, 711, 1415, 1483
BstMAI	GTCTC	2 cut(s)	570, 1746
BstMCI	CGRYCG	1 cut(s)	31
BstNI	CCWGG	2 cut(s)	247, 275
BstNSI	RCATGY	1 cut(s)	891
BstSCI	CCNGG	4 cut(s)	245, 273, 995, 1418
BstSFI	CTRYAG	1 cut(s)	1110
BstV1I	GCAGC	7 cut(s)	897, 1000, 1093, 1370, 1373, 1711, 1733
BstX2I	RGATCY	2 cut(s)	811, 848
BstYI	RGATCY	2 cut(s)	811, 848
Bsu15I	ATCGAT	1 cut(s)	1590
BsuRI	GGCC	4 cut(s)	5, 278, 827, 1835
BsuTUI	ATCGAT	1 cut(s)	1590
BtgI	CCRYGG	1 cut(s)	828
BtrI	CACGTC	1 cut(s)	399
BtsCI	GGATG	4 cut(s)	211, 711, 1415, 1483
BtsI	GCAGTG	1 cut(s)	193
BtsIMutI	CAGTG	5 cut(s)	193, 968, 1127, 1143, 1598
Cac8I	GCNNGC	9 cut(s)	19, 76, 300, 364, 993, 1073, 1293, 1660, 1771
CaiI	CAGNNNCTG	1 cut(s)	568
CciI	TCATGA	1 cut(s)	804
Cfr10I	RCCGGY	3 cut(s)	17, 98, 1295
Cfr13I	GGNCC	4 cut(s)	130, 197, 233, 1833
ClaI	ATCGAT	1 cut(s)	1590
CseI	GACGC	2 cut(s)	160, 198
Csp6I	GTAC	2 cut(s)	33, 1877
CspAI	ACCGGT	1 cut(s)	98
CviAII	CATG	8 cut(s)	526, 716, 728, 805, 888, 1339, 1585, 1609
CviQI	GTAC	2 cut(s)	33, 1877
DdeI	CTNAG	4 cut(s)	900, 960, 1116, 1325
DraI	TTTAAA	1 cut(s)	181
DrdI	GACNNNNNNGTC	1 cut(s)	1609
DseDI	GACNNNNNNGTC	1 cut(s)	1609
EaeI	YGGCCR	2 cut(s)	3, 825
Eam1104I	CTCTTC	4 cut(s)	159, 493, 1004, 1687
EarI	CTCTTC	4 cut(s)	159, 493, 1004, 1687
EciI	GGCGGA	1 cut(s)	151
Ecl136II	GAGCTC	1 cut(s)	1810
Eco130I	CCWWGG	1 cut(s)	1062
Eco24I	GRGCYC	1 cut(s)	1812
Eco32I	GATATC	1 cut(s)	736
Eco47I	GGWCC	3 cut(s)	130, 197, 233
Eco53kI	GAGCTC	1 cut(s)	1810
EcoICRI	GAGCTC	1 cut(s)	1810
EcoRI	GAATTC	1 cut(s)	226
EcoRII	CCWGG	2 cut(s)	245, 273
EcoRV	GATATC	1 cut(s)	736
EcoT14I	CCWWGG	1 cut(s)	1062
EcoT38I	GRGCYC	1 cut(s)	1812
ErhI	CCWWGG	1 cut(s)	1062
FaeI	CATG	8 cut(s)	529, 719, 731, 808, 891, 1342, 1588, 1612
FalI	AAGNNNNNCTT	2 cut(s)	362, 394
FaqI	GGGAC	2 cut(s)	323, 1055
FatI	CATG	8 cut(s)	525, 715, 727, 804, 887, 1338, 1584, 1608
FauI	CCCGC	4 cut(s)	349, 1000, 1165, 1534
FblI	GTMKAC	1 cut(s)	212
FokI	GGATG	4 cut(s)	218, 698, 1402, 1490
FriOI	GRGCYC	1 cut(s)	1812
GsuI	CTGGAG	2 cut(s)	257, 1063
HaeIII	GGCC	4 cut(s)	5, 278, 827, 1835
HapII	CCGG	8 cut(s)	6, 18, 99, 133, 996, 1296, 1332, 1419
HgaI	GACGC	2 cut(s)	160, 198
Hin1I	GRCGYC	1 cut(s)	63
Hin1II	CATG	8 cut(s)	529, 719, 731, 808, 891, 1342, 1588, 1612
HincII	GTYRAC	4 cut(s)	213, 697, 721, 1195
HindII	GTYRAC	4 cut(s)	213, 697, 721, 1195
HindIII	AAGCTT	2 cut(s)	376, 634
HinfI	GANTC	7 cut(s)	242, 575, 647, 667, 698, 1120, 1577
HpaII	CCGG	8 cut(s)	6, 18, 99, 133, 996, 1296, 1332, 1419
HphI	GGTGA	3 cut(s)	676, 1804, 1840
Hpy166II	GTNNAC	4 cut(s)	213, 697, 721, 1195
Hpy188III	TCNNGA	5 cut(s)	579, 739, 770, 805, 1564
Hpy8I	GTNNAC	4 cut(s)	213, 697, 721, 1195
Hpy99I	CGWCG	4 cut(s)	65, 68, 214, 241
HpyAV	CCTTC	5 cut(s)	106, 406, 1317, 1468, 1837
HpyCH4III	ACNGT	5 cut(s)	32, 201, 432, 1131, 1828
HpyCH4IV	ACGT	3 cut(s)	63, 398, 839
HpyF3I	CTNAG	4 cut(s)	900, 960, 1116, 1325
HpySE526I	ACGT	3 cut(s)	63, 398, 839
Hsp92I	GRCGYC	1 cut(s)	63
Hsp92II	CATG	8 cut(s)	529, 719, 731, 808, 891, 1342, 1588, 1612
KroI	GCCGGC	1 cut(s)	17
KroNI	GCCGGC	1 cut(s)	19
LguI	GCTCTTC	1 cut(s)	493
LmnI	GCTCC	7 cut(s)	8, 40, 1096, 1412, 1458, 1818, 1861
Lsp1109I	GCAGC	7 cut(s)	897, 1000, 1093, 1370, 1373, 1711, 1733
LweI	GCATC	7 cut(s)	33, 196, 739, 1424, 1468, 1557, 1873
MaeII	ACGT	3 cut(s)	63, 398, 839
MaeIII	GTNAC	9 cut(s)	94, 394, 481, 1028, 1048, 1237, 1380, 1549, 1706
MbiI	CCGCTC	1 cut(s)	1821
MfeI	CAATTG	1 cut(s)	1089
MflI	RGATCY	2 cut(s)	811, 848
MhlI	GDGCHC	3 cut(s)	1101, 1463, 1812
MlsI	TGGCCA	1 cut(s)	827
MluNI	TGGCCA	1 cut(s)	827
MlyI	GAGTC	2 cut(s)	584, 692
MmeI	TCCRAC	4 cut(s)	183, 260, 330, 1839
Mox20I	TGGCCA	1 cut(s)	827
MroNI	GCCGGC	1 cut(s)	17
MroXI	GAANNNNTTC	1 cut(s)	684
MscI	TGGCCA	1 cut(s)	827
MseI	TTAA	5 cut(s)	108, 180, 972, 1005, 1202
Msp20I	TGGCCA	1 cut(s)	827
MspA1I	CMGCKG	1 cut(s)	1724
MspI	CCGG	8 cut(s)	6, 18, 99, 133, 996, 1296, 1332, 1419
MspR9I	CCNGG	4 cut(s)	247, 275, 997, 1420
MunI	CAATTG	1 cut(s)	1089
Mva1269I	GAATGC	2 cut(s)	1237, 1360
MvaI	CCWGG	2 cut(s)	247, 275
NaeI	GCCGGC	1 cut(s)	19
NciI	CCSGG	2 cut(s)	997, 1420
NgoMIV	GCCGGC	1 cut(s)	17
NlaIII	CATG	8 cut(s)	529, 719, 731, 808, 891, 1342, 1588, 1612
NlaIV	GGNNCC	3 cut(s)	813, 1177, 1663
NmuCI	GTSAC	5 cut(s)	394, 1028, 1048, 1380, 1549
NspI	RCATGY	1 cut(s)	891
NspV	TTCGAA	1 cut(s)	162
PagI	TCATGA	1 cut(s)	804
PciI	ACATGT	1 cut(s)	887
PciSI	GCTCTTC	1 cut(s)	493
PcsI	WCGNNNNNNNCGW	5 cut(s)	90, 441, 450, 729, 836
PctI	GAATGC	2 cut(s)	1237, 1360
PdiI	GCCGGC	1 cut(s)	19
PdmI	GAANNNNTTC	1 cut(s)	684
PfeI	GAWTC	5 cut(s)	242, 647, 667, 1120, 1577
PflMI	CCANNNNNTGG	2 cut(s)	568, 1063
PinAI	ACCGGT	1 cut(s)	98
PleI	GAGTC	2 cut(s)	583, 692
PpsI	GAGTC	2 cut(s)	583, 692
PscI	ACATGT	1 cut(s)	887
PsiI	TTATAA	1 cut(s)	1286
Psp124BI	GAGCTC	1 cut(s)	1812
Psp6I	CCWGG	2 cut(s)	245, 273
PspGI	CCWGG	2 cut(s)	245, 273
PspN4I	GGNNCC	3 cut(s)	813, 1177, 1663
PspPI	GGNCC	4 cut(s)	130, 197, 233, 1833
PstNI	CAGNNNCTG	1 cut(s)	568
PsuI	RGATCY	2 cut(s)	811, 848
PvuII	CAGCTG	1 cut(s)	1724
RsaI	GTAC	2 cut(s)	34, 1878
RsaNI	GTAC	2 cut(s)	33, 1877
SacI	GAGCTC	1 cut(s)	1812
SalI	GTCGAC	1 cut(s)	211
SapI	GCTCTTC	1 cut(s)	493
SaqAI	TTAA	5 cut(s)	108, 180, 972, 1005, 1202
Sau96I	GGNCC	4 cut(s)	130, 197, 233, 1833
SchI	GAGTC	2 cut(s)	584, 692
ScrFI	CCNGG	4 cut(s)	247, 275, 997, 1420
SduI	GDGCHC	3 cut(s)	1101, 1463, 1812
SfaNI	GCATC	7 cut(s)	33, 196, 739, 1424, 1468, 1557, 1873
SfcI	CTRYAG	1 cut(s)	1110
SfuI	TTCGAA	1 cut(s)	162
SinI	GGWCC	3 cut(s)	130, 197, 233
SmlI	CTYRAG	1 cut(s)	1562
SmoI	CTYRAG	1 cut(s)	1562
SspI	AATATT	1 cut(s)	625
SstI	GAGCTC	1 cut(s)	1812
StyD4I	CCNGG	4 cut(s)	245, 273, 995, 1418
StyI	CCWWGG	1 cut(s)	1062
TaaI	ACNGT	5 cut(s)	32, 201, 432, 1131, 1828
TaiI	ACGT	3 cut(s)	66, 401, 842
TaqI	TCGA	9 cut(s)	27, 162, 212, 435, 444, 1084, 1123, 1580, 1590
TatI	WGTACW	1 cut(s)	1876
TauI	GCSGC	5 cut(s)	24, 90, 93, 281, 1824
TfiI	GAWTC	5 cut(s)	242, 647, 667, 1120, 1577
Tru1I	TTAA	5 cut(s)	108, 180, 972, 1005, 1202
Tru9I	TTAA	5 cut(s)	108, 180, 972, 1005, 1202
TscAI	CASTG	5 cut(s)	193, 968, 1134, 1150, 1605
TseFI	GTSAC	5 cut(s)	394, 1028, 1048, 1380, 1549
TseI	GCWGC	8 cut(s)	910, 988, 1106, 1358, 1361, 1721, 1724, 1882
Tsp45I	GTSAC	5 cut(s)	394, 1028, 1048, 1380, 1549
TspDTI	ATGAA	3 cut(s)	542, 747, 1608
TspGWI	ACGGA	5 cut(s)	254, 1016, 1234, 1526, 1855
TspRI	CASTG	5 cut(s)	193, 968, 1134, 1150, 1605
Van91I	CCANNNNNTGG	2 cut(s)	568, 1063
VpaK11BI	GGWCC	3 cut(s)	130, 197, 233
XapI	RAATTY	3 cut(s)	191, 226, 916
XceI	RCATGY	1 cut(s)	891
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1186
XmiI	GTMKAC	1 cut(s)	212
XmnI	GAANNNNTTC	1 cut(s)	684
ZraI	GACGTC	1 cut(s)	64

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.