Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4D

Orthogroup ID

OG0012227

Physical Location & Seq

Genomic Coordinates Forward (+)

60595365 .. 60598096

Gene Structure 2732 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4DG389200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1884 bp

ATGGCCGGCGGCGCGTCGGAGCTTCTGCAACTCGTCAACGACGTCGTCGGCGCTGGAAAGTCCGCCGGCGGAGGAGTTGGCGGCGCCTTCAGGAAGGACTGCACCGATCTGGTGCGGCGGATCGCGCTGCTGACGCATTTGTTCGAGGAGATTAGGAACTTCAAAGGACTCGAATTTCCACCCTTGGATGCTTCCACTTCTTCTTCCTGCTCCACACAGCCGTGGGTTTCCGATCTCGTCACGGCGCTTCAGGCCGCGAAGCGGCTTGTATTGGTGGCCACTAGCTTCAATTCCAATTGTGACGCTCCTGTGCTCGCCGATGAAGCTAGCAAGAGGATAAGCTTCCATTTTCAATGCGCGACGTGGAGATTGGAGAAGGCGTTGAGTGAAATACCGTATGATCAGTTTGAAATATCAGAGGAAGTTGAAGAACAGGTTGCATTGGTTAGAGCACAATTGAGAAGAGCCATAGAAAGATATGGGACCTTGAATACGAGGAAAATGTCTTTTTATGGTCTACCTCAGTCTCTGGTAGAGTCTGGAAAATGGGTGCATGTTATAGAGAACAATAGTAGTTCAAAGATGATAGACAGTCTTCCCAAGAGCTTTAGTGCTGATGATCTGGTTCATAAATCGCAAAGGATGAGCAACTCCTGTGTGGCAGAGGCGCCTTCAGTCTGCTCAACAAATGAGACTCATGTTGATGGTGAGGAAGATATGAACAAGAAGCCTGACGCCACTGTCATCCCTGATTTTATATGCCCAATATCTTTGGAACTCATGAGAGATCCTGTTATTGTGGCCACTGGTCAGACATACGAGAGATCTTACATACAGAGATGGATAGACTGCGGAAATACAACATGTCCAAAAACTCAGCAAAAGCTTCAAAATTTGACACTGACTCCAAATTATGTCTTGAGAAGTCTAGTTGCTCAGTGGTGTATTGACAACAACATCGAGCAGCTGACAGGATTAACAAATGGTAAACTCAAGAAGAGTGATGGATCCTTTCGTGACATTAGTGGGGACATAGCGACAATTCGAGCTCTGGTAAGCAAGCTTGCAGGTCGATCAATTGAGGAGCAGAGATCAGCTGCAGCGGAAATTAGGTCACTGTCCAAAAGAAGTACTGATAACCGAATACTAATTGCAGAAGCGGGCGCTATTCCGGTATTGGTCAATCTCTTAACAGTAGAAGATGGCTTAACACAAGAGAATGCAGTGACTTCCATTCTCAACCTCTCTATATATGAAAACAACAAGGGGCTTATAATGCTTGCGGGTGCTGTTCCTTCTATTGTCCAAGTCCTCAGAGCTGGAAGCATGGAGGCTCGAGAGAACGCAGCAGCGACCATTTTTAGTTTGTCGCTTGCCGATGAGAACAAAATAATTATAGGTGCATCGGGAGCAATTTCAGCTTTGGTGGAATTGCTTCAAAATGGGAGCACAAGAGGGAGGAAGGATGCTGCAACAGCGCTGTTCAATTTGTGCATTTATCAGGGCAACAAGGGCAGAGCTATCAGAGCAGGGATAATTACAGCTTTACTAAAGATGCTAACTGATTCAAGCAATTGCATGGTTGATGAAGCACTGACCATTATGTCAGTTCTTGCTAACCATCAAGAGGCAAAAGTTACTATAGTAAAGGCCGGCACAATCCCTGTTTTGATAGACCTTTTGCGGACAGGCCTGCCTCGAAACAAAGAGAACGCATCTGCCATTTTGCTTGCATTGTGCAAGAGAGAGACCGAGAACCTTGCCTGCCTAAGTAGGCTTGGTGCAGTCATACCCTTGACAGAGCTCACTAAGAGCGGAACAGAGAGGGCCAAAAGGAAGGCTAGTTCATTGCTGGAGCATCTTCGGAAGTTGCAGCAGCTATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004842 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0006464 GO:0006807 GO:0008150 GO:0008152 GO:0009966 GO:0009987 GO:0010033 GO:0010200 GO:0010243 GO:0010646 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0023051 GO:0031647 GO:0031648 GO:0032446 GO:0036211 GO:0042221 GO:0042493 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043621 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044424 GO:0044464 GO:0048583 GO:0050789 GO:0050794 GO:0050896 GO:0051865 GO:0065007 GO:0065008 GO:0070647 GO:0071704 GO:0140096 GO:1901564 GO:1901698 GO:1901700 GO:2000022

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Arm U-box

Protein Analysis

627

Amino Acids

68.07

Weight (kDa)

7.47

Isoelectric Point (pI)

46.08

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PUB10_N	PF25368	31 - 156	3.7e-41	PUB10-like, N-terminal domain
U-box	PF04564	250 - 318	4.5e-18	U-box domain
ARM_PUB	PF25598	348 - 621	3.8e-23	Plant U-box protein ARM repeat region
ARM_ARMC5	PF24768	352 - 529	8.9e-10	ARMC5
Arm	PF00514	377 - 416	7.1e-08	Armadillo/beta-catenin-like repeat
Arm	PF00514	460 - 498	4.8e-08	Armadillo/beta-catenin-like repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012227)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G23030 AT1G71020 AT1G71020
fragaria_vesca	FvH4_4g32300
malus_domestica	MD13G1026300.v1.1 MD16G1029300.v1.1
prunus_persica	Prupe.1G323500_v2.0.a1
pyrus_communis	pycom16g02520
rosa_chinensis	RchiOBHm_Chr4g0441091
rosa_laevigata	RLG00000006115
rosa_multiflora	Rmu_co8350821.1_g000001 Rmu_sc0006317.1_g000015
rosa_roxburghii	Rroxscaffold_5G00382050
rosa_rugosa	Rorug04G0331000
rosa_samantha	Rh4AG382600 Rh4BG396400 Rh4CG411500 Rh4DG389200
rosa_wichuraiana	Rw4G033020

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1274
AasI	GACNNNNNNGTC	2 cut(s)	740, 1603
AatII	GACGTC	1 cut(s)	45
Acc36I	ACCTGC	1 cut(s)	1058
AccB1I	GGYRCC	2 cut(s)	83, 667
AccBSI	CCGCTC	1 cut(s)	1815
AccI	GTMKAC	1 cut(s)	517
AccII	CGCG	4 cut(s)	14, 125, 257, 359
AclWI	GGATC	4 cut(s)	128, 782, 1002, 1015
AcoI	YGGCCR	3 cut(s)	3, 276, 801
AcsI	RAATTY	2 cut(s)	173, 892
AcuI	CTGAAG	3 cut(s)	73, 233, 657
AcyI	GRCGYC	4 cut(s)	42, 84, 668, 735
AfaI	GTAC	1 cut(s)	1132
AfeI	AGCGCT	1 cut(s)	1479
AfiI	CCNNNNNNNGG	2 cut(s)	261, 1627
AflIII	ACRYGT	1 cut(s)	863
AjiI	CACGTC	1 cut(s)	363
AleI	CACNNNNGTG	1 cut(s)	220
AloI	GAACNNNNNNTCC	2 cut(s)	1828, 1860
Alw21I	GWGCWC	5 cut(s)	315, 454, 1051, 1451, 1806
Alw26I	GTCTC	3 cut(s)	531, 686, 1742
AlwI	GGATC	4 cut(s)	128, 782, 1002, 1015
AlwNI	CAGNNNCTG	1 cut(s)	529
Ama87I	CYCGRG	1 cut(s)	1335
Aor51HI	AGCGCT	1 cut(s)	1479
AoxI	GGCC	7 cut(s)	3, 252, 276, 801, 1650, 1690, 1827
ApeKI	GCWGC	9 cut(s)	127, 964, 1097, 1100, 1346, 1349, 1469, 1873, 1876
ApoI	RAATTY	2 cut(s)	173, 892
Asp700I	GAANNNNTTC	1 cut(s)	1434
AspLEI	GCGC	9 cut(s)	14, 53, 86, 127, 247, 359, 670, 1166, 1480
AspS9I	GGNCC	2 cut(s)	483, 1827
AsuHPI	GGTGA	1 cut(s)	719
AsuNHI	GCTAGC	1 cut(s)	326
AvaI	CYCGRG	1 cut(s)	1335
AvaII	GGWCC	1 cut(s)	483
BalI	TGGCCA	2 cut(s)	278, 803
BamHI	GGATCC	1 cut(s)	1007
BanI	GGYRCC	2 cut(s)	83, 667
BanII	GRGCYC	2 cut(s)	1051, 1806
BbsI	GAAGAC	1 cut(s)	587
Bbv12I	GWGCWC	5 cut(s)	315, 454, 1051, 1451, 1806
BbvI	GCAGC	7 cut(s)	114, 976, 1084, 1112, 1358, 1361, 1456
BccI	CCATC	5 cut(s)	698, 834, 998, 1196, 1629
BceAI	ACGGC	2 cut(s)	205, 258
BcgI	CGANNNNNNTGC	2 cut(s)	1742, 1776
BclI	TGATCA	1 cut(s)	400
BcoDI	GTCTC	3 cut(s)	531, 686, 1742
BfaI	CTAG	4 cut(s)	282, 327, 929, 1842
BfmI	CTRYAG	2 cut(s)	1098, 1641
BfoI	RGCGCY	6 cut(s)	54, 87, 248, 671, 1167, 1481
BfuAI	ACCTGC	1 cut(s)	1058
BglII	AGATCT	1 cut(s)	824
BmcAI	AGTACT	1 cut(s)	1132
Bme18I	GGWCC	1 cut(s)	483
BmeT110I	CYCGRG	1 cut(s)	1335
BmgBI	CACGTC	1 cut(s)	363
BmgT120I	GGNCC	2 cut(s)	483, 1827
BmiI	GGNNCC	4 cut(s)	85, 484, 669, 1009
BmsI	GCATC	6 cut(s)	178, 1412, 1456, 1545, 1724, 1867
BmtI	GCTAGC	1 cut(s)	330
BpiI	GAAGAC	1 cut(s)	587
BpmI	CTGGAG	1 cut(s)	1874
BpuEI	CTTGAG	2 cut(s)	940, 977
BsaHI	GRCGYC	4 cut(s)	42, 84, 668, 735
BsaI	GGTCTC	1 cut(s)	1742
BsaJI	CCNNGG	2 cut(s)	183, 221
BsaWI	WCCGGW	1 cut(s)	1171
BsaXI	ACNNNNNCTCC	4 cut(s)	365, 395, 889, 919
Bsc4I	CCNNNNNNNGG	2 cut(s)	261, 1627
Bse118I	RCCGGY	3 cut(s)	5, 65, 1652
Bse1I	ACTGG	1 cut(s)	811
Bse3DI	GCAATG	1 cut(s)	1847
BseDI	CCNNGG	2 cut(s)	183, 221
BseGI	GGATG	4 cut(s)	193, 648, 744, 1471
BseLI	CCNNNNNNNGG	2 cut(s)	261, 1627
BseMI	GCAATG	1 cut(s)	1847
BseMII	CTCAG	4 cut(s)	536, 890, 950, 1327
BseNI	ACTGG	1 cut(s)	811
BseRI	GAGGAG	3 cut(s)	87, 161, 1097
BseXI	GCAGC	7 cut(s)	114, 976, 1084, 1112, 1358, 1361, 1456
BsgI	GTGCAG	2 cut(s)	85, 1803
Bsh1236I	CGCG	4 cut(s)	14, 125, 257, 359
BshFI	GGCC	7 cut(s)	5, 254, 278, 803, 1652, 1692, 1829
BshNI	GGYRCC	2 cut(s)	83, 667
BsiHKAI	GWGCWC	5 cut(s)	315, 454, 1051, 1451, 1806
BsiHKCI	CYCGRG	1 cut(s)	1335
BsiSI	CCGG	4 cut(s)	6, 66, 1172, 1653
BslFI	GGGAC	2 cut(s)	496, 1043
BslI	CCNNNNNNNGG	2 cut(s)	261, 1627
BsmAI	GTCTC	3 cut(s)	531, 686, 1742
BsmFI	GGGAC	2 cut(s)	496, 1043
BsmI	GAATGC	1 cut(s)	1225
BsnI	GGCC	7 cut(s)	5, 254, 278, 803, 1652, 1692, 1829
Bso31I	GGTCTC	1 cut(s)	1742
BsoBI	CYCGRG	1 cut(s)	1335
Bsp1286I	GDGCHC	5 cut(s)	315, 454, 1051, 1451, 1806
BspANI	GGCC	7 cut(s)	5, 254, 278, 803, 1652, 1692, 1829
BspCNI	CTCAG	4 cut(s)	535, 889, 949, 1326
BspFNI	CGCG	4 cut(s)	14, 125, 257, 359
BspHI	TCATGA	1 cut(s)	780
BspLI	GGNNCC	4 cut(s)	85, 484, 669, 1009
BspMAI	CTGCAG	1 cut(s)	1102
BspMI	ACCTGC	1 cut(s)	1058
BspOI	GCTAGC	1 cut(s)	330
BspPI	GGATC	4 cut(s)	128, 782, 1002, 1015
BspQI	GCTCTTC	1 cut(s)	457
BspT107I	GGYRCC	2 cut(s)	83, 667
BspTNI	GGTCTC	1 cut(s)	1742
BsrBI	CCGCTC	1 cut(s)	1815
BsrDI	GCAATG	1 cut(s)	1847
BsrFI	RCCGGY	3 cut(s)	5, 65, 1652
BsrI	ACTGG	1 cut(s)	811
BssAI	RCCGGY	3 cut(s)	5, 65, 1652
BssECI	CCNNGG	2 cut(s)	183, 221
BssNI	GRCGYC	4 cut(s)	42, 84, 668, 735
BssT1I	CCWWGG	1 cut(s)	183
Bst4CI	ACNGT	5 cut(s)	396, 593, 742, 1119, 1195
Bst6I	CTCTTC	2 cut(s)	457, 992
BstACI	GRCGYC	4 cut(s)	42, 84, 668, 735
BstDEI	CTNAG	6 cut(s)	522, 876, 936, 1313, 1769, 1809
BstDSI	CCRYGG	1 cut(s)	221
BstF5I	GGATG	4 cut(s)	193, 648, 744, 1471
BstFNI	CGCG	4 cut(s)	14, 125, 257, 359
BstH2I	RGCGCY	6 cut(s)	54, 87, 248, 671, 1167, 1481
BstHHI	GCGC	9 cut(s)	14, 53, 86, 127, 247, 359, 670, 1166, 1480
BstMAI	GTCTC	3 cut(s)	531, 686, 1742
BstNSI	RCATGY	2 cut(s)	557, 867
BstSFI	CTRYAG	2 cut(s)	1098, 1641
BstUI	CGCG	4 cut(s)	14, 125, 257, 359
BstV1I	GCAGC	7 cut(s)	114, 976, 1084, 1112, 1358, 1361, 1456
BstV2I	GAAGAC	1 cut(s)	587
BstX2I	RGATCY	3 cut(s)	787, 824, 1007
BstYI	RGATCY	3 cut(s)	787, 824, 1007
BsuRI	GGCC	7 cut(s)	5, 254, 278, 803, 1652, 1692, 1829
BtgI	CCRYGG	1 cut(s)	221
BtrI	CACGTC	1 cut(s)	363
BtsCI	GGATG	4 cut(s)	193, 648, 744, 1471
BtsI	GCAGTG	1 cut(s)	1230
BtsIMutI	CAGTG	7 cut(s)	738, 804, 899, 944, 1115, 1230, 1592
BveI	ACCTGC	1 cut(s)	1058
CaiI	CAGNNNCTG	1 cut(s)	529
CciI	TCATGA	1 cut(s)	780
CfoI	GCGC	9 cut(s)	14, 53, 86, 127, 247, 359, 670, 1166, 1480
Cfr10I	RCCGGY	3 cut(s)	5, 65, 1652
Cfr13I	GGNCC	2 cut(s)	483, 1827
CseI	GACGC	4 cut(s)	3, 142, 311, 743
Csp6I	GTAC	1 cut(s)	1131
CviAII	CATG	6 cut(s)	554, 698, 781, 864, 1327, 1579
CviQI	GTAC	1 cut(s)	1131
DdeI	CTNAG	6 cut(s)	522, 876, 936, 1313, 1769, 1809
DinI	GGCGCC	2 cut(s)	85, 669
DrdI	GACNNNNNNGTC	2 cut(s)	740, 1603
DseDI	GACNNNNNNGTC	2 cut(s)	740, 1603
EaeI	YGGCCR	3 cut(s)	3, 276, 801
Eam1104I	CTCTTC	2 cut(s)	457, 992
EarI	CTCTTC	2 cut(s)	457, 992
EciI	GGCGGA	3 cut(s)	52, 84, 133
Ecl136II	GAGCTC	2 cut(s)	1049, 1804
Eco130I	CCWWGG	1 cut(s)	183
Eco147I	AGGCCT	1 cut(s)	1692
Eco24I	GRGCYC	2 cut(s)	1051, 1806
Eco31I	GGTCTC	1 cut(s)	1742
Eco47I	GGWCC	1 cut(s)	483
Eco47III	AGCGCT	1 cut(s)	1479
Eco53kI	GAGCTC	2 cut(s)	1049, 1804
Eco57I	CTGAAG	3 cut(s)	73, 233, 657
Eco88I	CYCGRG	1 cut(s)	1335
EcoICRI	GAGCTC	2 cut(s)	1049, 1804
EcoO109I	RGGNCCY	1 cut(s)	483
EcoT14I	CCWWGG	1 cut(s)	183
EcoT38I	GRGCYC	2 cut(s)	1051, 1806
EgeI	GGCGCC	2 cut(s)	85, 669
EheI	GGCGCC	2 cut(s)	85, 669
ErhI	CCWWGG	1 cut(s)	183
FaeI	CATG	6 cut(s)	557, 701, 784, 867, 1330, 1582
FaqI	GGGAC	2 cut(s)	496, 1043
FatI	CATG	6 cut(s)	553, 697, 780, 863, 1326, 1578
FauI	CCCGC	2 cut(s)	1153, 1276
FbaI	TGATCA	1 cut(s)	400
FblI	GTMKAC	1 cut(s)	517
FokI	GGATG	4 cut(s)	200, 655, 731, 1478
FriOI	GRGCYC	2 cut(s)	1051, 1806
FspBI	CTAG	4 cut(s)	282, 327, 929, 1842
GlaI	GCGC	9 cut(s)	13, 52, 85, 126, 246, 358, 669, 1165, 1479
GsuI	CTGGAG	1 cut(s)	1874
HaeII	RGCGCY	6 cut(s)	54, 87, 248, 671, 1167, 1481
HaeIII	GGCC	7 cut(s)	5, 254, 278, 803, 1652, 1692, 1829
HapII	CCGG	4 cut(s)	6, 66, 1172, 1653
HgaI	GACGC	4 cut(s)	3, 142, 311, 743
HhaI	GCGC	9 cut(s)	14, 53, 86, 127, 247, 359, 670, 1166, 1480
Hin1I	GRCGYC	4 cut(s)	42, 84, 668, 735
Hin1II	CATG	6 cut(s)	557, 701, 784, 867, 1330, 1582
Hin6I	GCGC	9 cut(s)	12, 51, 84, 125, 245, 357, 668, 1164, 1478
HinP1I	GCGC	9 cut(s)	12, 51, 84, 125, 245, 357, 668, 1164, 1478
HincII	GTYRAC	1 cut(s)	37
HindII	GTYRAC	1 cut(s)	37
HindIII	AAGCTT	3 cut(s)	340, 884, 1061
HinfI	GANTC	5 cut(s)	168, 536, 694, 904, 1565
HpaII	CCGG	4 cut(s)	6, 66, 1172, 1653
HphI	GGTGA	1 cut(s)	719
Hpy166II	GTNNAC	3 cut(s)	37, 518, 989
Hpy188I	TCNGA	7 cut(s)	19, 232, 418, 813, 1316, 1526, 1866
Hpy188III	TCNNGA	9 cut(s)	91, 540, 781, 919, 994, 1016, 1337, 1407, 1625
Hpy8I	GTNNAC	3 cut(s)	37, 518, 989
Hpy99I	CGWCG	5 cut(s)	19, 44, 47, 50, 364
HpyAV	CCTTC	7 cut(s)	88, 97, 370, 681, 1305, 1456, 1831
HpyCH4III	ACNGT	5 cut(s)	396, 593, 742, 1119, 1195
HpyCH4IV	ACGT	2 cut(s)	42, 362
HpyF3I	CTNAG	6 cut(s)	522, 876, 936, 1313, 1769, 1809
HpySE526I	ACGT	2 cut(s)	42, 362
Hsp92I	GRCGYC	4 cut(s)	42, 84, 668, 735
Hsp92II	CATG	6 cut(s)	557, 701, 784, 867, 1330, 1582
HspAI	GCGC	9 cut(s)	12, 51, 84, 125, 245, 357, 668, 1164, 1478
KasI	GGCGCC	2 cut(s)	83, 667
KroI	GCCGGC	3 cut(s)	5, 65, 1652
KroNI	GCCGGC	3 cut(s)	7, 67, 1654
Ksp22I	TGATCA	1 cut(s)	400
LguI	GCTCTTC	1 cut(s)	457
LmnI	GCTCC	7 cut(s)	19, 215, 310, 1084, 1409, 1446, 1855
Lsp1109I	GCAGC	7 cut(s)	114, 976, 1084, 1112, 1358, 1361, 1456
LweI	GCATC	6 cut(s)	178, 1412, 1456, 1545, 1724, 1867
MaeI	CTAG	4 cut(s)	282, 327, 929, 1842
MaeII	ACGT	2 cut(s)	42, 362
MaeIII	GTNAC	6 cut(s)	238, 299, 1016, 1113, 1225, 1636
MbiI	CCGCTC	1 cut(s)	1815
MboII	GAAGA	9 cut(s)	192, 195, 440, 474, 587, 725, 1009, 1211, 1853
MfeI	CAATTG	4 cut(s)	295, 455, 1077, 1573
MflI	RGATCY	3 cut(s)	787, 824, 1007
MhlI	GDGCHC	5 cut(s)	315, 454, 1051, 1451, 1806
MlsI	TGGCCA	2 cut(s)	278, 803
MluNI	TGGCCA	2 cut(s)	278, 803
Mly113I	GGCGCC	2 cut(s)	84, 668
MlyI	GAGTC	4 cut(s)	162, 545, 688, 898
Mox20I	TGGCCA	2 cut(s)	278, 803
MreI	CGCCGGCG	1 cut(s)	65
MroNI	GCCGGC	3 cut(s)	5, 65, 1652
MroXI	GAANNNNTTC	1 cut(s)	1434
MscI	TGGCCA	2 cut(s)	278, 803
MseI	TTAA	3 cut(s)	977, 1190, 1208
MslI	CAYNNNNRTG	2 cut(s)	220, 702
Msp20I	TGGCCA	2 cut(s)	278, 803
MspA1I	CMGCKG	3 cut(s)	967, 1097, 1103
MspI	CCGG	4 cut(s)	6, 66, 1172, 1653
MunI	CAATTG	4 cut(s)	295, 455, 1077, 1573
Mva1269I	GAATGC	1 cut(s)	1225
MvnI	CGCG	4 cut(s)	14, 125, 257, 359
NaeI	GCCGGC	3 cut(s)	7, 67, 1654
NarI	GGCGCC	2 cut(s)	84, 668
NgoMIV	GCCGGC	3 cut(s)	5, 65, 1652
NheI	GCTAGC	1 cut(s)	326
NlaIII	CATG	6 cut(s)	557, 701, 784, 867, 1330, 1582
NlaIV	GGNNCC	4 cut(s)	85, 484, 669, 1009
NmuCI	GTSAC	5 cut(s)	238, 299, 1016, 1113, 1225
NspI	RCATGY	2 cut(s)	557, 867
OliI	CACNNNNGTG	1 cut(s)	220
PaeR7I	CTCGAG	1 cut(s)	1335
PagI	TCATGA	1 cut(s)	780
PceI	AGGCCT	1 cut(s)	1692
PciI	ACATGT	1 cut(s)	863
PciSI	GCTCTTC	1 cut(s)	457
PcsI	WCGNNNNNNNCGW	1 cut(s)	39
PctI	GAATGC	1 cut(s)	1225
PdiI	GCCGGC	3 cut(s)	7, 67, 1654
PdmI	GAANNNNTTC	1 cut(s)	1434
PfeI	GAWTC	1 cut(s)	1565
PflFI	GACNNNGTC	1 cut(s)	44
PleI	GAGTC	4 cut(s)	162, 544, 688, 898
PluTI	GGCGCC	2 cut(s)	87, 671
PpsI	GAGTC	4 cut(s)	162, 544, 688, 898
PpuMI	RGGWCCY	1 cut(s)	483
PscI	ACATGT	1 cut(s)	863
PsiI	TTATAA	1 cut(s)	1274
Psp124BI	GAGCTC	2 cut(s)	1051, 1806
Psp5II	RGGWCCY	1 cut(s)	483
PspN4I	GGNNCC	4 cut(s)	85, 484, 669, 1009
PspPI	GGNCC	2 cut(s)	483, 1827
PspPPI	RGGWCCY	1 cut(s)	483
PstI	CTGCAG	1 cut(s)	1102
PstNI	CAGNNNCTG	1 cut(s)	529
PsuI	RGATCY	3 cut(s)	787, 824, 1007
PsyI	GACNNNGTC	1 cut(s)	44
PvuII	CAGCTG	2 cut(s)	967, 1097
RsaI	GTAC	1 cut(s)	1132
RsaNI	GTAC	1 cut(s)	1131
RseI	CAYNNNNRTG	2 cut(s)	220, 702
SacI	GAGCTC	2 cut(s)	1051, 1806
SapI	GCTCTTC	1 cut(s)	457
SaqAI	TTAA	3 cut(s)	977, 1190, 1208
Sau96I	GGNCC	2 cut(s)	483, 1827
ScaI	AGTACT	1 cut(s)	1132
SchI	GAGTC	4 cut(s)	162, 545, 688, 898
SduI	GDGCHC	5 cut(s)	315, 454, 1051, 1451, 1806
SfaNI	GCATC	6 cut(s)	178, 1412, 1456, 1545, 1724, 1867
SfcI	CTRYAG	2 cut(s)	1098, 1641
SfoI	GGCGCC	2 cut(s)	85, 669
Sfr274I	CTCGAG	1 cut(s)	1335
SgrAI	CRCCGGYG	1 cut(s)	65
SinI	GGWCC	1 cut(s)	483
SlaI	CTCGAG	1 cut(s)	1335
SmiMI	CAYNNNNRTG	2 cut(s)	220, 702
SmlI	CTYRAG	3 cut(s)	919, 992, 1335
SmoI	CTYRAG	3 cut(s)	919, 992, 1335
SseBI	AGGCCT	1 cut(s)	1692
SspDI	GGCGCC	2 cut(s)	83, 667
SspMI	CTAG	4 cut(s)	282, 327, 929, 1842
SstI	GAGCTC	2 cut(s)	1051, 1806
StuI	AGGCCT	1 cut(s)	1692
StyI	CCWWGG	1 cut(s)	183
TaaI	ACNGT	5 cut(s)	396, 593, 742, 1119, 1195
TaiI	ACGT	2 cut(s)	45, 365
TaqI	TCGA	7 cut(s)	144, 171, 960, 1045, 1072, 1336, 1699
TaqII	GACCGA	1 cut(s)	1766
TatI	WGTACW	1 cut(s)	1130
TauI	GCSGC	5 cut(s)	12, 84, 118, 257, 265
TfiI	GAWTC	1 cut(s)	1565
Tru1I	TTAA	3 cut(s)	977, 1190, 1208
Tru9I	TTAA	3 cut(s)	977, 1190, 1208
TscAI	CASTG	7 cut(s)	745, 811, 906, 944, 1122, 1230, 1599
TseFI	GTSAC	5 cut(s)	238, 299, 1016, 1113, 1225
TseI	GCWGC	9 cut(s)	127, 964, 1097, 1100, 1346, 1349, 1469, 1873, 1876
Tsp45I	GTSAC	5 cut(s)	238, 299, 1016, 1113, 1225
TspDTI	ATGAA	6 cut(s)	336, 617, 734, 1269, 1602, 1836
TspRI	CASTG	7 cut(s)	745, 811, 906, 944, 1122, 1230, 1599
Tth111I	GACNNNGTC	1 cut(s)	44
VpaK11BI	GGWCC	1 cut(s)	483
XapI	RAATTY	2 cut(s)	173, 892
XceI	RCATGY	2 cut(s)	557, 867
XhoI	CTCGAG	1 cut(s)	1335
XmiI	GTMKAC	1 cut(s)	517
XmnI	GAANNNNTTC	1 cut(s)	1434
XspI	CTAG	4 cut(s)	282, 327, 929, 1842
ZraI	GACGTC	1 cut(s)	43
ZrmI	AGTACT	1 cut(s)	1132

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.