Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb4

Orthogroup ID

OG0007666

Physical Location & Seq

Genomic Coordinates Forward (+)

32654996 .. 32659340

Gene Structure 4345 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_4g35310.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2052 bp

ATGTCAGGCTCGAGACGTTACTCGCTAGGTAGTAGCCCGCCGCAGATGGGCGGGTCGACGACTCCGGATCTGAAGCAGCGGGTTATAGGCTGCATTAATAAACTCTCTGACCGTGACACTCTAGCCATTGCCACCAACGAGCTCGAGTCCATTGCTAGAAACCTCACACAGGACTCGTTTGCTACGTTCTTGATCTGCATTCACAACACCGACGCGTCGTCCAAGCCGCCGGTGAGGAAGCAATGCGTGTCGTTGCTTACGTTGATGTCCAATTTACACGGCGACGCGCTGGCGCCGTTTCTGTCGAAGATGATCTCCACCGTCCTCCGCCGCCTCCGCGACCCCGACTCGGCCGTCCGCTCCGCCTGCGTCGACGCCGTCGCCGCCATGTCGGCCAAGATCACGACGCCGGAGTTCGCGGTTTCGTTTCTGAAGCCGTTGATGGACACGCTGGCGGCGGAGCAGGACCTCAACTCGCAGATCGGCTCGGCGCTCTGCCTCTCCGCCGCGATCGACGCCGCGCCGGAGGTGGAGACGGCGCAGCTGAGGAGGAGCCTGGCGCGGCTCGGGAAGCTGGCGAAGAGCGAGGGGTTTAAGGCCAAGGCGGCGCTGATGGTGCTCATCGGGAGCATGGTTGGCGCCGGCGGCGCGTCGAGTAAAGGCGCGTTGGATTGGCTCGTGCCGTGCGTGGTGGAGTTTCTGAGCAGCGATGACTGGGCTGTGAGAAAAGGCGCGGCGGAGGCGCTCGGAAAAGTAGCCACGGCGGAGTCAGATTTGGCGCCACTCTATAAAGCTTGTTGCTTGAACGCTTTGGAAAGCCGGAGATTTGATAAGGTGAAGGTAGTAAGGGAGACTATGAATAATGCATTGGAGATGTGGAAGGTTTTCGCAGGCGATTTCGAGGAGGTTACAGCTCCAATTCAATCTAGATCTTCTTCAACTGATAATGAGAATGATCGATCCTTTCCTACCGTATCGAAAAGTTCTAATGATGCTGTCTTTAGAACACCTCAGACAAAGAAAAATGTCCCTACAAACAGGTCCCCTCCATCTAACGGTTCTTTGGTGGCCACTGCCAAAAAGGGAAGTTCTCAAGGTAGAGCTGAGAGAAGTTCAGACACAATCAAGCTCAGTAAGTTGGACCACAAGAAACCCTCGGATTGGAAAATTGAAATTGCAACGCCAAACTCTGCATCTTCGAAGGTGTCTCATGCAGATGATATTGTTAAGAGTGATTTTAAAGATGGGGAATCAGGAAAGAATGAGCACAAAGCAAATTGCATGCCAGAAGATAAAAGTGTACCCTTCAGTAGGAATCGTAATGAAAAAGCACACAAATTTGGTGGTTTGAGATCTCGATCTAGGGTGGTTCCATTTGATGATGAGAACTGTGACTCAGATGTTGTGCTTAGTAATCCTGCAGAAGAAGTTTACGAGAGCCCCAAGGAGGCTGAGGATCTGAATCTGATCAGGGCCCAACTCATTCAGATTGAAAACCAGCAAGCCAACTTATTTGACCTTCTCCAGAGATTCATTGGAAACTCTCAGAGTGGGCTGAATTCTCTCGAGACACGGGTACATGGCCTTGAGATGGCGCTGGATGGAATTTCTTATGATTTGGCACTATCAACTGGAAGGATTCCAAGCACTGAATCTGCAGAAAACACATGTTGCAAGCTGCCTGGTGCTGAGTTCTTGAGTTCCAAGTTCTGGCGTAGAACTGAAGGCCGGTGTACTGCTCCAAGGTTCTCTTCTTATTCTGGAACACATCCCTCAATGAATACTGGGCCTGATAAAGACACTGGTGCTGAACCATATACATTTAACCGCCAAAGATTTCAGCAACAAAGTAGGGGTGCACATGCAGTTAACTCGATAACAGATAGTCAAGGCGACTCAAAGGTACAGACAGGGTACTTTCCAAACAGAACACCAAAGAGCATACTCCAAGATGCTGTGAGGGTTCAAATTTACAATGCTAGTCGGAATGATGGGGTTCCTCCAGCTAATTGTATAGCATCAAGGAACCTAAGCAGAAGGTCATCTACTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005856 GO:0005874 GO:0008017 GO:0008092 GO:0015630 GO:0015631 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0044422 GO:0044424 GO:0044430 GO:0044446 GO:0044464 GO:0099080 GO:0099081 GO:0099512 GO:0099513

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cohesin_HEAT HEAT

Protein Analysis

684

Amino Acids

74.11

Weight (kDa)

8.7

Isoelectric Point (pI)

53.02

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TOR1L1_N	PF24714	23 - 294	7.1e-111	TORTIFOLIA1 N-terminal
HEAT_EF3_N	PF24987	77 - 176	1.7e-06	EF3 N-terminal HEAT repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0007666)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G27210 AT1G59850
fragaria_vesca	FvH4_4g35310 FvH4_4g35310 FvH4_4g35310
malus_domestica	MD13G1084500.v1.1 MD16G1083600.v1.1
prunus_persica	Prupe.1G262400_v2.0.a1
pyrus_communis	pycom13g07290 pycom16g07250
rosa_chinensis	RchiOBHm_Chr4g0444931
rosa_laevigata	RLG00000005786
rosa_multiflora	Rmu_co8293673.1_g000001 Rmu_sc0010689.1_g000001 Rmu_sc0011561.1_g000001 Rmu_sc0026285.1_g000001
rosa_roxburghii	Rroxscaffold_5G00385420
rosa_rugosa	Rorug04G0356500 Rorug04G0356500
rosa_samantha	Rh4AG418000 Rh4BG429700 Rh4CG444500 Rh4DG425700
rosa_wichuraiana	Rw4G035820

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	353
AccB1I	GGYRCC	3 cut(s)	292, 638, 778
AccB7I	CCANNNNNTGG	1 cut(s)	1710
AccBSI	CCGCTC	1 cut(s)	360
AccI	GTMKAC	2 cut(s)	56, 372
AccIII	TCCGGA	1 cut(s)	64
AclWI	GGATC	3 cut(s)	75, 954, 1464
AcoI	YGGCCR	3 cut(s)	351, 393, 1068
AcsI	RAATTY	4 cut(s)	1337, 1558, 1605, 1968
AcuI	CTGAAG	4 cut(s)	92, 452, 1291, 1743
AcyI	GRCGYC	6 cut(s)	293, 375, 407, 516, 639, 779
AfaI	GTAC	5 cut(s)	1302, 1578, 1735, 1905, 1916
AfiI	CCNNNNNNNGG	9 cut(s)	47, 169, 349, 1055, 1161, 1311, 1447, 1591, 1710
AflIII	ACRYGT	2 cut(s)	213, 1667
AgsI	TTSAA	6 cut(s)	805, 923, 939, 1172, 1493, 1967
AhdI	GACNNNNNGTC	1 cut(s)	217
AjnI	CCWGG	2 cut(s)	555, 1681
AjuI	GAANNNNNNNTTGG	4 cut(s)	851, 883, 1735, 1767
AluBI	AGCT	9 cut(s)	142, 544, 574, 794, 914, 1103, 1129, 1678, 2006
AluI	AGCT	9 cut(s)	142, 544, 574, 794, 914, 1103, 1129, 1678, 2006
Alw21I	GWGCWC	4 cut(s)	144, 621, 1269, 1861
Alw26I	GTCTC	5 cut(s)	7, 527, 845, 1212, 1562
Alw44I	GTGCAC	1 cut(s)	1857
AlwI	GGATC	3 cut(s)	75, 954, 1464
Ama87I	CYCGRG	4 cut(s)	10, 143, 566, 1565
Aor13HI	TCCGGA	1 cut(s)	64
AoxI	GGCC	8 cut(s)	351, 393, 597, 1068, 1473, 1582, 1726, 1787
ApaI	GGGCCC	1 cut(s)	1477
ApaLI	GTGCAC	1 cut(s)	1857
ApeKI	GCWGC	5 cut(s)	76, 90, 541, 705, 1678
ApoI	RAATTY	4 cut(s)	1337, 1558, 1605, 1968
AseI	ATTAAT	1 cut(s)	96
Asp700I	GAANNNNTTC	1 cut(s)	884
AspS9I	GGNCC	6 cut(s)	466, 1041, 1141, 1473, 1474, 1787
AsuHPI	GGTGA	2 cut(s)	244, 847
AsuII	TTCGAA	1 cut(s)	1199
AvaI	CYCGRG	4 cut(s)	10, 143, 566, 1565
AvaII	GGWCC	3 cut(s)	466, 1041, 1141
BaeGI	GKGCMC	2 cut(s)	1477, 1861
BalI	TGGCCA	1 cut(s)	1070
BanI	GGYRCC	3 cut(s)	292, 638, 778
BanII	GRGCYC	3 cut(s)	144, 1442, 1477
BarI	GAAGNNNNNNTAC	1 cut(s)	2029
BauI	CACGAG	1 cut(s)	677
Bbv12I	GWGCWC	4 cut(s)	144, 621, 1269, 1861
BbvCI	CCTCAGC	2 cut(s)	545, 1452
BbvI	GCAGC	5 cut(s)	77, 88, 553, 717, 1665
BccI	CCATC	8 cut(s)	40, 436, 607, 1057, 1238, 1585, 1595, 1985
BceAI	ACGGC	8 cut(s)	280, 295, 338, 362, 421, 552, 667, 777
BcgI	CGANNNNNNTGC	4 cut(s)	134, 168, 1854, 1888
BciT130I	CCWGG	2 cut(s)	557, 1683
BclI	TGATCA	1 cut(s)	1467
BcoDI	GTCTC	5 cut(s)	7, 527, 845, 1212, 1562
BfaI	CTAG	6 cut(s)	26, 122, 156, 927, 1362, 1980
BfmI	CTRYAG	2 cut(s)	1419, 1656
BfoI	RGCGCY	7 cut(s)	296, 494, 611, 642, 746, 782, 1598
BglI	GCCNNNNNGGC	2 cut(s)	392, 605
BglII	AGATCT	2 cut(s)	929, 1352
Bme1390I	CCNGG	2 cut(s)	557, 1683
Bme18I	GGWCC	3 cut(s)	466, 1041, 1141
BmeRI	GACNNNNNGTC	1 cut(s)	217
BmeT110I	CYCGRG	4 cut(s)	10, 143, 566, 1565
BmgT120I	GGNCC	6 cut(s)	466, 1041, 1141, 1473, 1474, 1787
BmiI	GGNNCC	9 cut(s)	294, 554, 640, 780, 1043, 1371, 1475, 1998, 2027
BmrFI	CCNGG	2 cut(s)	557, 1683
BmrI	ACTGGG	2 cut(s)	724, 1794
BmsI	GCATC	4 cut(s)	982, 1202, 1942, 2027
BmuI	ACTGGG	2 cut(s)	724, 1794
BpmI	CTGGAG	2 cut(s)	1508, 1986
Bpu10I	CCTNAGC	3 cut(s)	545, 1452, 2030
Bpu14I	TTCGAA	1 cut(s)	1199
BpuEI	CTTGAG	3 cut(s)	1077, 1607, 1717
Bsa29I	ATCGAT	1 cut(s)	958
BsaBI	GATNNNNATC	2 cut(s)	1357, 1461
BsaHI	GRCGYC	6 cut(s)	293, 375, 407, 516, 639, 779
BsaJI	CCNNGG	5 cut(s)	600, 759, 1155, 1443, 1742
BsaWI	WCCGGW	1 cut(s)	64
Bsc4I	CCNNNNNNNGG	9 cut(s)	47, 169, 349, 1055, 1161, 1311, 1447, 1591, 1710
Bse118I	RCCGGY	3 cut(s)	229, 641, 1728
Bse1I	ACTGG	4 cut(s)	719, 1636, 1789, 1807
Bse3DI	GCAATG	3 cut(s)	126, 150, 248
Bse8I	GATNNNNATC	2 cut(s)	1357, 1461
BseAI	TCCGGA	1 cut(s)	64
BseBI	CCWGG	2 cut(s)	557, 1683
BseCI	ATCGAT	1 cut(s)	958
BseDI	CCNNGG	5 cut(s)	600, 759, 1155, 1443, 1742
BseGI	GGATG	2 cut(s)	1606, 1768
BseJI	GATNNNNATC	2 cut(s)	1357, 1461
BseLI	CCNNNNNNNGG	9 cut(s)	47, 169, 349, 1055, 1161, 1311, 1447, 1591, 1710
BseMI	GCAATG	3 cut(s)	126, 150, 248
BseMII	CTCAG	9 cut(s)	536, 692, 1025, 1095, 1144, 1410, 1443, 1559, 1680
BseNI	ACTGG	4 cut(s)	719, 1636, 1789, 1807
BseRI	GAGGAG	3 cut(s)	562, 565, 917
BseSI	GKGCMC	2 cut(s)	1477, 1861
BseX3I	CGGCCG	1 cut(s)	351
BseXI	GCAGC	5 cut(s)	77, 88, 553, 717, 1665
Bsh1285I	CGRYCG	2 cut(s)	354, 513
BshFI	GGCC	8 cut(s)	353, 395, 599, 1070, 1475, 1584, 1728, 1789
BshNI	GGYRCC	3 cut(s)	292, 638, 778
BshVI	ATCGAT	1 cut(s)	958
BsiEI	CGRYCG	2 cut(s)	354, 513
BsiHKAI	GWGCWC	4 cut(s)	144, 621, 1269, 1861
BsiHKCI	CYCGRG	4 cut(s)	10, 143, 566, 1565
BsiSI	CCGG	7 cut(s)	65, 230, 410, 524, 642, 820, 1729
BslFI	GGGAC	2 cut(s)	1013, 1027
BslI	CCNNNNNNNGG	9 cut(s)	47, 169, 349, 1055, 1161, 1311, 1447, 1591, 1710
BsmAI	GTCTC	5 cut(s)	7, 527, 845, 1212, 1562
BsmBI	CGTCTC	2 cut(s)	7, 527
BsmFI	GGGAC	2 cut(s)	1013, 1027
BsmI	GAATGC	1 cut(s)	198
BsnI	GGCC	8 cut(s)	353, 395, 599, 1070, 1475, 1584, 1728, 1789
BsoBI	CYCGRG	4 cut(s)	10, 143, 566, 1565
Bsp119I	TTCGAA	1 cut(s)	1199
Bsp120I	GGGCCC	1 cut(s)	1473
Bsp1286I	GDGCHC	6 cut(s)	144, 621, 1269, 1442, 1477, 1861
Bsp13I	TCCGGA	1 cut(s)	64
BspANI	GGCC	8 cut(s)	353, 395, 599, 1070, 1475, 1584, 1728, 1789
BspCNI	CTCAG	9 cut(s)	537, 693, 1024, 1096, 1143, 1409, 1444, 1558, 1681
BspDI	ATCGAT	1 cut(s)	958
BspEI	TCCGGA	1 cut(s)	64
BspLI	GGNNCC	9 cut(s)	294, 554, 640, 780, 1043, 1371, 1475, 1998, 2027
BspMAI	CTGCAG	2 cut(s)	1423, 1660
BspPI	GGATC	3 cut(s)	75, 954, 1464
BspQI	GCTCTTC	1 cut(s)	575
BspT104I	TTCGAA	1 cut(s)	1199
BspT107I	GGYRCC	3 cut(s)	292, 638, 778
BsrBI	CCGCTC	1 cut(s)	360
BsrDI	GCAATG	3 cut(s)	126, 150, 248
BsrFI	RCCGGY	3 cut(s)	229, 641, 1728
BsrI	ACTGG	4 cut(s)	719, 1636, 1789, 1807
BssAI	RCCGGY	3 cut(s)	229, 641, 1728
BssECI	CCNNGG	5 cut(s)	600, 759, 1155, 1443, 1742
BssNI	GRCGYC	6 cut(s)	293, 375, 407, 516, 639, 779
BssSI	CACGAG	1 cut(s)	677
BssT1I	CCWWGG	3 cut(s)	600, 1443, 1742
Bst2BI	CACGAG	1 cut(s)	677
Bst2UI	CCWGG	2 cut(s)	557, 1683
Bst4CI	ACNGT	5 cut(s)	113, 322, 973, 1058, 1391
Bst6I	CTCTTC	2 cut(s)	575, 1756
BstACI	GRCGYC	6 cut(s)	293, 375, 407, 516, 639, 779
BstBI	TTCGAA	1 cut(s)	1199
BstDSI	CCRYGG	1 cut(s)	759
BstENI	CCTNNNNNAGG	2 cut(s)	167, 1309
BstF5I	GGATG	2 cut(s)	1606, 1768
BstH2I	RGCGCY	7 cut(s)	296, 494, 611, 642, 746, 782, 1598
BstMAI	GTCTC	5 cut(s)	7, 527, 845, 1212, 1562
BstMCI	CGRYCG	2 cut(s)	354, 513
BstNI	CCWGG	2 cut(s)	557, 1683
BstNSI	RCATGY	3 cut(s)	1285, 1671, 1865
BstSCI	CCNGG	2 cut(s)	555, 1681
BstSFI	CTRYAG	2 cut(s)	1419, 1656
BstSLI	GKGCMC	2 cut(s)	1477, 1861
BstV1I	GCAGC	5 cut(s)	77, 88, 553, 717, 1665
BstX2I	RGATCY	4 cut(s)	67, 929, 1352, 1456
BstYI	RGATCY	4 cut(s)	67, 929, 1352, 1456
BstZI	CGGCCG	1 cut(s)	351
Bsu15I	ATCGAT	1 cut(s)	958
BsuRI	GGCC	8 cut(s)	353, 395, 599, 1070, 1475, 1584, 1728, 1789
BsuTUI	ATCGAT	1 cut(s)	958
BtgI	CCRYGG	1 cut(s)	759
BtgZI	GCGATG	1 cut(s)	723
BtsCI	GGATG	2 cut(s)	1606, 1768
BtsI	GCAGTG	1 cut(s)	1071
BtsIMutI	CAGTG	3 cut(s)	1071, 1647, 1800
Cfr10I	RCCGGY	3 cut(s)	229, 641, 1728
Cfr13I	GGNCC	6 cut(s)	466, 1041, 1141, 1473, 1474, 1787
ClaI	ATCGAT	1 cut(s)	958
CseI	GACGC	8 cut(s)	204, 221, 293, 358, 383, 415, 524, 639
Csp6I	GTAC	5 cut(s)	1301, 1577, 1734, 1904, 1915
CspCI	CAANNNNNGTGG	2 cut(s)	1324, 1359
CviAII	CATG	7 cut(s)	388, 631, 1211, 1282, 1580, 1668, 1862
CviQI	GTAC	5 cut(s)	1301, 1577, 1734, 1904, 1915
DinI	GGCGCC	3 cut(s)	294, 640, 780
DraI	TTTAAA	1 cut(s)	1240
DrdI	GACNNNNNNGTC	1 cut(s)	353
DriI	GACNNNNNGTC	1 cut(s)	217
DseDI	GACNNNNNNGTC	1 cut(s)	353
EaeI	YGGCCR	3 cut(s)	351, 393, 1068
EagI	CGGCCG	1 cut(s)	351
Eam1104I	CTCTTC	2 cut(s)	575, 1756
Eam1105I	GACNNNNNGTC	1 cut(s)	217
EarI	CTCTTC	2 cut(s)	575, 1756
EciI	GGCGGA	6 cut(s)	317, 352, 473, 493, 752, 779
Ecl136II	GAGCTC	1 cut(s)	142
EclXI	CGGCCG	1 cut(s)	351
Eco130I	CCWWGG	3 cut(s)	600, 1443, 1742
Eco24I	GRGCYC	3 cut(s)	144, 1442, 1477
Eco47I	GGWCC	3 cut(s)	466, 1041, 1141
Eco52I	CGGCCG	1 cut(s)	351
Eco53kI	GAGCTC	1 cut(s)	142
Eco57I	CTGAAG	4 cut(s)	92, 452, 1291, 1743
Eco88I	CYCGRG	4 cut(s)	10, 143, 566, 1565
EcoICRI	GAGCTC	1 cut(s)	142
EcoNI	CCTNNNNNAGG	2 cut(s)	167, 1309
EcoO109I	RGGNCCY	3 cut(s)	466, 1041, 1473
EcoRI	GAATTC	1 cut(s)	1558
EcoRII	CCWGG	2 cut(s)	555, 1681
EcoT14I	CCWWGG	3 cut(s)	600, 1443, 1742
EcoT22I	ATGCAT	1 cut(s)	868
EcoT38I	GRGCYC	3 cut(s)	144, 1442, 1477
EgeI	GGCGCC	3 cut(s)	294, 640, 780
EheI	GGCGCC	3 cut(s)	294, 640, 780
ErhI	CCWWGG	3 cut(s)	600, 1443, 1742
Esp3I	CGTCTC	2 cut(s)	7, 527
FaeI	CATG	7 cut(s)	391, 634, 1214, 1285, 1583, 1671, 1865
FalI	AAGNNNNNCTT	2 cut(s)	1735, 1767
FaqI	GGGAC	2 cut(s)	1013, 1027
FatI	CATG	7 cut(s)	387, 630, 1210, 1281, 1579, 1667, 1861
FauI	CCCGC	3 cut(s)	44, 45, 72
FbaI	TGATCA	1 cut(s)	1467
FblI	GTMKAC	2 cut(s)	56, 372
FokI	GGATG	2 cut(s)	1613, 1755
FriOI	GRGCYC	3 cut(s)	144, 1442, 1477
FspBI	CTAG	6 cut(s)	26, 122, 156, 927, 1362, 1980
GsuI	CTGGAG	2 cut(s)	1508, 1986
HaeII	RGCGCY	7 cut(s)	296, 494, 611, 642, 746, 782, 1598
HaeIII	GGCC	8 cut(s)	353, 395, 599, 1070, 1475, 1584, 1728, 1789
HapII	CCGG	7 cut(s)	65, 230, 410, 524, 642, 820, 1729
HgaI	GACGC	8 cut(s)	204, 221, 293, 358, 383, 415, 524, 639
Hin1I	GRCGYC	6 cut(s)	293, 375, 407, 516, 639, 779
Hin1II	CATG	7 cut(s)	391, 634, 1214, 1285, 1583, 1671, 1865
HincII	GTYRAC	3 cut(s)	57, 373, 1870
HindII	GTYRAC	3 cut(s)	57, 373, 1870
HindIII	AAGCTT	1 cut(s)	792
HpaI	GTTAAC	1 cut(s)	1870
HpaII	CCGG	7 cut(s)	65, 230, 410, 524, 642, 820, 1729
HphI	GGTGA	2 cut(s)	244, 847
Hpy166II	GTNNAC	7 cut(s)	57, 373, 1301, 1432, 1734, 1859, 1870
Hpy8I	GTNNAC	7 cut(s)	57, 373, 1301, 1432, 1734, 1859, 1870
HpyAV	CCTTC	8 cut(s)	832, 874, 1195, 1315, 1529, 1629, 1718, 2031
HpyCH4III	ACNGT	5 cut(s)	113, 322, 973, 1058, 1391
HpyCH4IV	ACGT	3 cut(s)	16, 185, 260
HpySE526I	ACGT	3 cut(s)	16, 185, 260
Hsp92I	GRCGYC	6 cut(s)	293, 375, 407, 516, 639, 779
Hsp92II	CATG	7 cut(s)	391, 634, 1214, 1285, 1583, 1671, 1865
KasI	GGCGCC	3 cut(s)	292, 638, 778
Kpn2I	TCCGGA	1 cut(s)	64
KroI	GCCGGC	1 cut(s)	641
KroNI	GCCGGC	1 cut(s)	643
Ksp22I	TGATCA	1 cut(s)	1467
KspAI	GTTAAC	1 cut(s)	1870
LguI	GCTCTTC	1 cut(s)	575
LmnI	GCTCC	6 cut(s)	365, 460, 552, 627, 919, 1744
Lsp1109I	GCAGC	5 cut(s)	77, 88, 553, 717, 1665
LweI	GCATC	4 cut(s)	982, 1202, 1942, 2027
MaeI	CTAG	6 cut(s)	26, 122, 156, 927, 1362, 1980
MaeII	ACGT	3 cut(s)	16, 185, 260
MaeIII	GTNAC	4 cut(s)	17, 113, 907, 1391
MbiI	CCGCTC	1 cut(s)	360
MboII	GAAGA	8 cut(s)	319, 592, 924, 927, 1188, 1301, 1436, 1743
MflI	RGATCY	4 cut(s)	67, 929, 1352, 1456
MhlI	GDGCHC	6 cut(s)	144, 621, 1269, 1442, 1477, 1861
MlsI	TGGCCA	1 cut(s)	1070
MluI	ACGCGT	1 cut(s)	213
MluNI	TGGCCA	1 cut(s)	1070
Mly113I	GGCGCC	3 cut(s)	293, 639, 779
MlyI	GAGTC	7 cut(s)	55, 155, 167, 341, 776, 1388, 1889
MmeI	TCCRAC	3 cut(s)	648, 1119, 1964
Mox20I	TGGCCA	1 cut(s)	1070
Mph1103I	ATGCAT	1 cut(s)	868
MreI	CGCCGGCG	1 cut(s)	641
MroI	TCCGGA	1 cut(s)	64
MroNI	GCCGGC	1 cut(s)	641
MroXI	GAANNNNTTC	1 cut(s)	884
MscI	TGGCCA	1 cut(s)	1070
MseI	TTAA	6 cut(s)	96, 594, 1227, 1239, 1824, 1869
MslI	CAYNNNNRTG	1 cut(s)	1215
Msp20I	TGGCCA	1 cut(s)	1070
MspA1I	CMGCKG	2 cut(s)	79, 544
MspI	CCGG	7 cut(s)	65, 230, 410, 524, 642, 820, 1729
MspR9I	CCNGG	2 cut(s)	557, 1683
Mva1269I	GAATGC	1 cut(s)	198
MvaI	CCWGG	2 cut(s)	557, 1683
NaeI	GCCGGC	1 cut(s)	643
NarI	GGCGCC	3 cut(s)	293, 639, 779
NgoMIV	GCCGGC	1 cut(s)	641
NlaIII	CATG	7 cut(s)	391, 634, 1214, 1285, 1583, 1671, 1865
NlaIV	GGNNCC	9 cut(s)	294, 554, 640, 780, 1043, 1371, 1475, 1998, 2027
NmeAIII	GCCGAG	2 cut(s)	329, 467
NmuCI	GTSAC	2 cut(s)	113, 1391
NsiI	ATGCAT	1 cut(s)	868
NspI	RCATGY	3 cut(s)	1285, 1671, 1865
NspV	TTCGAA	1 cut(s)	1199
PaeI	GCATGC	1 cut(s)	1285
PaeR7I	CTCGAG	3 cut(s)	10, 143, 1565
PciI	ACATGT	1 cut(s)	1667
PciSI	GCTCTTC	1 cut(s)	575
PcsI	WCGNNNNNNNCGW	3 cut(s)	182, 257, 684
PctI	GAATGC	1 cut(s)	198
PdiI	GCCGGC	1 cut(s)	643
PdmI	GAANNNNTTC	1 cut(s)	884
PfeI	GAWTC	6 cut(s)	1250, 1315, 1462, 1530, 1639, 1652
PflFI	GACNNNGTC	1 cut(s)	377
PflMI	CCANNNNNTGG	1 cut(s)	1710
Ple19I	CGATCG	1 cut(s)	513
PleI	GAGTC	7 cut(s)	55, 154, 167, 341, 775, 1388, 1889
PluTI	GGCGCC	3 cut(s)	296, 642, 782
PpsI	GAGTC	7 cut(s)	55, 154, 167, 341, 775, 1388, 1889
PpuMI	RGGWCCY	2 cut(s)	466, 1041
PscI	ACATGT	1 cut(s)	1667
PshBI	ATTAAT	1 cut(s)	96
Psp124BI	GAGCTC	1 cut(s)	144
Psp5II	RGGWCCY	2 cut(s)	466, 1041
Psp6I	CCWGG	2 cut(s)	555, 1681
PspGI	CCWGG	2 cut(s)	555, 1681
PspN4I	GGNNCC	9 cut(s)	294, 554, 640, 780, 1043, 1371, 1475, 1998, 2027
PspOMI	GGGCCC	1 cut(s)	1473
PspPI	GGNCC	6 cut(s)	466, 1041, 1141, 1473, 1474, 1787
PspPPI	RGGWCCY	2 cut(s)	466, 1041
PspXI	VCTCGAGB	1 cut(s)	143
PstI	CTGCAG	2 cut(s)	1423, 1660
PsuI	RGATCY	4 cut(s)	67, 929, 1352, 1456
PsyI	GACNNNGTC	1 cut(s)	377
PvuI	CGATCG	1 cut(s)	513
PvuII	CAGCTG	1 cut(s)	544
RsaI	GTAC	5 cut(s)	1302, 1578, 1735, 1905, 1916
RsaNI	GTAC	5 cut(s)	1301, 1577, 1734, 1904, 1915
RseI	CAYNNNNRTG	1 cut(s)	1215
SacI	GAGCTC	1 cut(s)	144
SalI	GTCGAC	2 cut(s)	55, 371
SapI	GCTCTTC	1 cut(s)	575
SaqAI	TTAA	6 cut(s)	96, 594, 1227, 1239, 1824, 1869
Sau96I	GGNCC	6 cut(s)	466, 1041, 1141, 1473, 1474, 1787
SchI	GAGTC	7 cut(s)	55, 155, 167, 341, 776, 1388, 1889
ScrFI	CCNGG	2 cut(s)	557, 1683
SduI	GDGCHC	6 cut(s)	144, 621, 1269, 1442, 1477, 1861
SfaNI	GCATC	4 cut(s)	982, 1202, 1942, 2027
SfcI	CTRYAG	2 cut(s)	1419, 1656
SfoI	GGCGCC	3 cut(s)	294, 640, 780
Sfr274I	CTCGAG	3 cut(s)	10, 143, 1565
SfuI	TTCGAA	1 cut(s)	1199
SgrAI	CRCCGGYG	2 cut(s)	229, 641
SgrDI	CGTCGACG	1 cut(s)	371
SinI	GGWCC	3 cut(s)	466, 1041, 1141
SlaI	CTCGAG	3 cut(s)	10, 143, 1565
SmiMI	CAYNNNNRTG	1 cut(s)	1215
SmlI	CTYRAG	6 cut(s)	10, 143, 1092, 1565, 1586, 1696
SmoI	CTYRAG	6 cut(s)	10, 143, 1092, 1565, 1586, 1696
SphI	GCATGC	1 cut(s)	1285
SspDI	GGCGCC	3 cut(s)	292, 638, 778
SspMI	CTAG	6 cut(s)	26, 122, 156, 927, 1362, 1980
SstI	GAGCTC	1 cut(s)	144
StyD4I	CCNGG	2 cut(s)	555, 1681
StyI	CCWWGG	3 cut(s)	600, 1443, 1742
TaaI	ACNGT	5 cut(s)	113, 322, 973, 1058, 1391
TaiI	ACGT	3 cut(s)	19, 188, 263
TatI	WGTACW	1 cut(s)	1733
TfiI	GAWTC	6 cut(s)	1250, 1315, 1462, 1530, 1639, 1652
Tru1I	TTAA	6 cut(s)	96, 594, 1227, 1239, 1824, 1869
Tru9I	TTAA	6 cut(s)	96, 594, 1227, 1239, 1824, 1869
TscAI	CASTG	3 cut(s)	1078, 1654, 1807
TseFI	GTSAC	2 cut(s)	113, 1391
TseI	GCWGC	5 cut(s)	76, 90, 541, 705, 1678
Tsp45I	GTSAC	2 cut(s)	113, 1391
TspDTI	ATGAA	4 cut(s)	872, 1338, 1522, 1793
TspRI	CASTG	3 cut(s)	1078, 1654, 1807
Tth111I	GACNNNGTC	1 cut(s)	377
Van91I	CCANNNNNTGG	1 cut(s)	1710
VneI	GTGCAC	1 cut(s)	1857
VpaK11BI	GGWCC	3 cut(s)	466, 1041, 1141
VspI	ATTAAT	1 cut(s)	96
XagI	CCTNNNNNAGG	2 cut(s)	167, 1309
XapI	RAATTY	4 cut(s)	1337, 1558, 1605, 1968
XbaI	TCTAGA	1 cut(s)	926
XceI	RCATGY	3 cut(s)	1285, 1671, 1865
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1532
XhoI	CTCGAG	3 cut(s)	10, 143, 1565
XmiI	GTMKAC	2 cut(s)	56, 372
XmnI	GAANNNNTTC	1 cut(s)	884
XspI	CTAG	6 cut(s)	26, 122, 156, 927, 1362, 1980
Zsp2I	ATGCAT	1 cut(s)	868

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.