Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0011561.1

Orthogroup ID

OG0007666

Physical Location & Seq

Genomic Coordinates Forward (+)

3005 .. 6292

Gene Structure 3288 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0011561.1_g000001.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2037 bp

atgtctggctctaggcgattctcgctaggcagcccgccacagccgggcgggtcggatctgaagcagcgggtcataacctgcctcaacaagctctctgaccgtgacactctggccatggccattaacgagctggagtgcatagctagaaatctcacacaagagtcgtttgctacgtttttgatctgcattcacaacaccgacgcgtcgtcgaagccgccggtgaggaagcaatgcgtgtcgctgctgacgatactgtccaattcacacggcgacgcgctggcgccgtttctgtcgaaaatgatctccaccgtcctccgccgcctccgcgaccccgactccgccgtccgattggcctgcgtggacgccgtcgccgccatgtcgtccaagatcacgacgccggagttcgcctcgtcgtttctgaagccgctgatggacacgctggcggtggagcaggactccaactcgcagatcggctcggcgctctgcctcgccgccgcgatcgacgccgcgccggaggtggagatggctcagctgaggaggagcctggcgcggctcgggaagctggccaagagcgacggcttcaaggccaaggcggcgctgatggtgctcatagggagcattgtcggcgccggcggcgcgtcgagcaaaggcgcgttggattggctcgtgccgtgcgttgtggagtttctgagcagcgacgactgggcggtcagaaagggcgcggctgaggccctcggaaaagtagccacggcggagacagagttggcgccactctataaagcttgttgcttgaatgctttggaaagccggagatttgataaggtgaaggtagtccgggagactatgaacaatgcactggagatgtggaaggttttcgcaggcgattccgaggaggtttctgctccaattcaatccagatcttcaatcgataatgagaatgatcgatcctttgctgccgtatcgaaaagttcaaatgatgttggctttaggactcctcagacaaagaaaacagtccccacaaacaggtccccttcatctaacggttctttggtgaccactgccaaaaagggaagtcctcaaagtagatatgagagaagttcagacacaaccaagctcaataagttggaccacaagaaaccctctgattggaaaattgaaattgccatgccaaactctgcctcttcgaaggtgtctcatgcagatgatattgttgcgagtgattttggagatggggaatcaggaaagaatgagcacaatgcaaatagcatggcagaagataaacgtgtactcttcagtaggaaccgtgatgaaaaagcatacaaatttggtggtttgagatctcggtctcgagtagttccatttgatgatgagaactatgactcggatgctgtggtttgtaatcctgcagaagaagtttacgagagccccaaggaggctgaggatctgaatttgatccgtgcgcaactcattcagattgaaaaccagcaagccaacctatttgacctcctccagagattcattggaaattctcagagtgggctgaattctcttgagacacgggtacatggccttgagatggcgctggatgaaatatcgtatgatttggcactatcaactggaaggattccaaacactgaatctgcagaaaacacatgttgcaagctgcctggtgctgagttcttgagttccaagttctggcgcagaacagaagggcggtgttctactccaaggttcccctcttatgctggaacccatccctcaatgaatgctgggcctgataaagatgccgctgctgaaccgtctacatttaaccgccaaagatttcagcaacaaagtaggggtgcatatacagtaatcccgacaacagaaattcatggcaactcgagggtacatacagggcactttccagacagaacaccaaagagcatactccaaggtgctgagagggtccaagtttacaatgctagccagtttgatggggtccctccaactaattgtatagcatcaaggaacctaagcagaaggccatctgcttag

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005856 GO:0005874 GO:0008017 GO:0008092 GO:0015630 GO:0015631 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0044422 GO:0044424 GO:0044430 GO:0044446 GO:0044464 GO:0099080 GO:0099081 GO:0099512 GO:0099513

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cohesin_HEAT HEAT

Protein Analysis

678

Amino Acids

73.77

Weight (kDa)

8.1

Isoelectric Point (pI)

54.14

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007666)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G27210 AT1G59850
fragaria_vesca	FvH4_4g35310 FvH4_4g35310 FvH4_4g35310
malus_domestica	MD13G1084500.v1.1 MD16G1083600.v1.1
prunus_persica	Prupe.1G262400_v2.0.a1
pyrus_communis	pycom13g07290 pycom16g07250
rosa_chinensis	RchiOBHm_Chr4g0444931
rosa_laevigata	RLG00000005786
rosa_multiflora	Rmu_co8293673.1_g000001 Rmu_sc0010689.1_g000001 Rmu_sc0011561.1_g000001 Rmu_sc0026285.1_g000001
rosa_roxburghii	Rroxscaffold_5G00385420
rosa_rugosa	Rorug04G0356500 Rorug04G0356500
rosa_samantha	Rh4AG418000 Rh4BG429700 Rh4CG444500 Rh4DG425700
rosa_wichuraiana	Rw4G035820

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	3 cut(s)	253, 341, 707
Acc16I	TGCGCA	1 cut(s)	1461
Acc36I	ACCTGC	1 cut(s)	86
AccB1I	GGYRCC	3 cut(s)	280, 626, 766
AccB7I	CCANNNNNTGG	1 cut(s)	1695
AccI	GTMKAC	1 cut(s)	1802
AccII	CGCG	9 cut(s)	203, 275, 327, 497, 509, 550, 638, 653, 722
AclWI	GGATC	4 cut(s)	63, 939, 1447, 1449
AcoI	YGGCCR	3 cut(s)	111, 117, 564
AcsI	RAATTY	5 cut(s)	1322, 1447, 1525, 1543, 1869
AcuI	CTGAAG	3 cut(s)	80, 440, 1276
AcyI	GRCGYC	6 cut(s)	281, 363, 395, 504, 627, 767
AfaI	GTAC	3 cut(s)	1287, 1563, 1890
AfiI	CCNNNNNNNGG	6 cut(s)	44, 1023, 1146, 1432, 1576, 1695
AflIII	ACRYGT	3 cut(s)	201, 1282, 1652
AgsI	TTSAA	7 cut(s)	583, 793, 911, 924, 972, 1157, 1478
AhdI	GACNNNNNGTC	1 cut(s)	205
AjnI	CCWGG	2 cut(s)	543, 1666
AluBI	AGCT	8 cut(s)	91, 130, 143, 532, 562, 782, 1114, 1663
AluI	AGCT	8 cut(s)	91, 130, 143, 532, 562, 782, 1114, 1663
Alw21I	GWGCWC	2 cut(s)	609, 1254
Alw26I	GTCTC	5 cut(s)	749, 833, 1197, 1350, 1547
AlwI	GGATC	4 cut(s)	63, 939, 1447, 1449
Ama87I	CYCGRG	3 cut(s)	554, 1347, 1882
AoxI	GGCC	9 cut(s)	111, 117, 351, 564, 585, 729, 1567, 1772, 2024
ApeKI	GCWGC	7 cut(s)	30, 64, 241, 693, 953, 1663, 1790
ApoI	RAATTY	5 cut(s)	1322, 1447, 1525, 1543, 1869
Asp700I	GAANNNNTTC	1 cut(s)	872
AspS9I	GGNCC	6 cut(s)	730, 1026, 1126, 1772, 1948, 1981
AsuC2I	CCSGG	2 cut(s)	45, 836
AsuHPI	GGTGA	3 cut(s)	232, 835, 1063
AsuII	TTCGAA	1 cut(s)	1184
AsuNHI	GCTAGC	1 cut(s)	1964
AvaI	CYCGRG	3 cut(s)	554, 1347, 1882
AvaII	GGWCC	4 cut(s)	1026, 1126, 1948, 1981
BaeGI	GKGCMC	1 cut(s)	1902
BalI	TGGCCA	3 cut(s)	113, 119, 566
BanI	GGYRCC	3 cut(s)	280, 626, 766
BanII	GRGCYC	1 cut(s)	1427
BauI	CACGAG	1 cut(s)	665
Bbv12I	GWGCWC	2 cut(s)	609, 1254
BbvCI	CCTCAGC	3 cut(s)	533, 726, 1437
BbvI	GCAGC	7 cut(s)	42, 76, 228, 705, 940, 1650, 1777
BccI	CCATC	8 cut(s)	424, 517, 595, 1223, 1570, 1761, 1970, 2035
BceAI	ACGGC	8 cut(s)	268, 283, 326, 350, 592, 655, 765, 941
BcgI	CGANNNNNNTGC	2 cut(s)	336, 370
BciT130I	CCWGG	2 cut(s)	545, 1668
BcnI	CCSGG	2 cut(s)	45, 836
BcoDI	GTCTC	5 cut(s)	749, 833, 1197, 1350, 1547
BfaI	CTAG	4 cut(s)	12, 26, 144, 1965
BfmI	CTRYAG	2 cut(s)	1404, 1641
BfoI	RGCGCY	6 cut(s)	284, 482, 599, 630, 770, 1583
BfuAI	ACCTGC	1 cut(s)	86
BglI	GCCNNNNNGGC	1 cut(s)	593
BglII	AGATCT	2 cut(s)	917, 1337
BlpI	GCTNAGC	1 cut(s)	528
Bme1390I	CCNGG	4 cut(s)	45, 545, 836, 1668
Bme18I	GGWCC	4 cut(s)	1026, 1126, 1948, 1981
BmeRI	GACNNNNNGTC	1 cut(s)	205
BmeT110I	CYCGRG	3 cut(s)	554, 1347, 1882
BmgT120I	GGNCC	6 cut(s)	730, 1026, 1126, 1772, 1948, 1981
BmrFI	CCNGG	4 cut(s)	45, 545, 836, 1668
BmrI	ACTGGG	1 cut(s)	712
BmsI	GCATC	3 cut(s)	1375, 1774, 2012
BmtI	GCTAGC	1 cut(s)	1968
BmuI	ACTGGG	1 cut(s)	712
BplI	GAGNNNNNCTC	4 cut(s)	392, 424, 440, 472
BpmI	CTGGAG	3 cut(s)	152, 878, 1493
Bpu10I	CCTNAGC	4 cut(s)	533, 726, 1437, 2015
Bpu1102I	GCTNAGC	1 cut(s)	528
Bpu14I	TTCGAA	1 cut(s)	1184
BpuEI	CTTGAG	3 cut(s)	1571, 1592, 1702
BpuMI	CCSGG	2 cut(s)	45, 836
Bsa29I	ATCGAT	2 cut(s)	927, 943
BsaHI	GRCGYC	6 cut(s)	281, 363, 395, 504, 627, 767
BsaI	GGTCTC	1 cut(s)	1350
BsaJI	CCNNGG	8 cut(s)	114, 588, 733, 747, 888, 1428, 1727, 1933
BsaXI	ACNNNNNCTCC	4 cut(s)	320, 350, 746, 776
Bsc4I	CCNNNNNNNGG	6 cut(s)	44, 1023, 1146, 1432, 1576, 1695
Bse118I	RCCGGY	2 cut(s)	217, 629
Bse1I	ACTGG	4 cut(s)	707, 861, 1621, 1969
Bse3DI	GCAATG	1 cut(s)	236
BseBI	CCWGG	2 cut(s)	545, 1668
BseCI	ATCGAT	2 cut(s)	927, 943
BseDI	CCNNGG	8 cut(s)	114, 588, 733, 747, 888, 1428, 1727, 1933
BseGI	GGATG	3 cut(s)	1390, 1591, 1753
BseLI	CCNNNNNNNGG	6 cut(s)	44, 1023, 1146, 1432, 1576, 1695
BseMI	GCAATG	1 cut(s)	236
BseMII	CTCAG	9 cut(s)	524, 542, 680, 717, 1010, 1428, 1544, 1665, 1932
BseNI	ACTGG	4 cut(s)	707, 861, 1621, 1969
BseRI	GAGGAG	5 cut(s)	550, 553, 905, 984, 1496
BseSI	GKGCMC	1 cut(s)	1902
BseXI	GCAGC	7 cut(s)	42, 76, 228, 705, 940, 1650, 1777
BseYI	CCCAGC	1 cut(s)	1769
Bsh1236I	CGCG	9 cut(s)	203, 275, 327, 497, 509, 550, 638, 653, 722
Bsh1285I	CGRYCG	1 cut(s)	501
BshFI	GGCC	9 cut(s)	113, 119, 353, 566, 587, 731, 1569, 1774, 2026
BshNI	GGYRCC	3 cut(s)	280, 626, 766
BshVI	ATCGAT	2 cut(s)	927, 943
BsiEI	CGRYCG	1 cut(s)	501
BsiHKAI	GWGCWC	2 cut(s)	609, 1254
BsiHKCI	CYCGRG	3 cut(s)	554, 1347, 1882
BsiSI	CCGG	7 cut(s)	44, 218, 398, 512, 630, 808, 835
BslFI	GGGAC	3 cut(s)	998, 1012, 1967
BslI	CCNNNNNNNGG	6 cut(s)	44, 1023, 1146, 1432, 1576, 1695
BsmAI	GTCTC	5 cut(s)	749, 833, 1197, 1350, 1547
BsmFI	GGGAC	3 cut(s)	998, 1012, 1967
BsmI	GAATGC	3 cut(s)	186, 799, 1771
BsnI	GGCC	9 cut(s)	113, 119, 353, 566, 587, 731, 1569, 1774, 2026
Bso31I	GGTCTC	1 cut(s)	1350
BsoBI	CYCGRG	3 cut(s)	554, 1347, 1882
Bsp119I	TTCGAA	1 cut(s)	1184
Bsp1286I	GDGCHC	4 cut(s)	609, 1254, 1427, 1902
Bsp1720I	GCTNAGC	1 cut(s)	528
Bsp19I	CCATGG	1 cut(s)	114
BspANI	GGCC	9 cut(s)	113, 119, 353, 566, 587, 731, 1569, 1774, 2026
BspCNI	CTCAG	9 cut(s)	525, 541, 681, 718, 1009, 1429, 1543, 1666, 1933
BspDI	ATCGAT	2 cut(s)	927, 943
BspFNI	CGCG	9 cut(s)	203, 275, 327, 497, 509, 550, 638, 653, 722
BspMAI	CTGCAG	2 cut(s)	1408, 1645
BspMI	ACCTGC	1 cut(s)	86
BspOI	GCTAGC	1 cut(s)	1968
BspPI	GGATC	4 cut(s)	63, 939, 1447, 1449
BspT104I	TTCGAA	1 cut(s)	1184
BspT107I	GGYRCC	3 cut(s)	280, 626, 766
BspTNI	GGTCTC	1 cut(s)	1350
BsrDI	GCAATG	1 cut(s)	236
BsrFI	RCCGGY	2 cut(s)	217, 629
BsrI	ACTGG	4 cut(s)	707, 861, 1621, 1969
BssAI	RCCGGY	2 cut(s)	217, 629
BssECI	CCNNGG	8 cut(s)	114, 588, 733, 747, 888, 1428, 1727, 1933
BssNI	GRCGYC	6 cut(s)	281, 363, 395, 504, 627, 767
BssSI	CACGAG	1 cut(s)	665
BssT1I	CCWWGG	5 cut(s)	114, 588, 1428, 1727, 1933
Bst2BI	CACGAG	1 cut(s)	665
Bst2UI	CCWGG	2 cut(s)	545, 1668
Bst4CI	ACNGT	8 cut(s)	101, 255, 310, 1012, 1043, 1304, 1800, 1852
Bst6I	CTCTTC	2 cut(s)	1186, 1295
BstACI	GRCGYC	6 cut(s)	281, 363, 395, 504, 627, 767
BstBI	TTCGAA	1 cut(s)	1184
BstDSI	CCRYGG	2 cut(s)	114, 747
BstEII	GGTNACC	1 cut(s)	1051
BstF5I	GGATG	3 cut(s)	1390, 1591, 1753
BstFNI	CGCG	9 cut(s)	203, 275, 327, 497, 509, 550, 638, 653, 722
BstH2I	RGCGCY	6 cut(s)	284, 482, 599, 630, 770, 1583
BstMAI	GTCTC	5 cut(s)	749, 833, 1197, 1350, 1547
BstMCI	CGRYCG	1 cut(s)	501
BstNI	CCWGG	2 cut(s)	545, 1668
BstNSI	RCATGY	1 cut(s)	1656
BstPI	GGTNACC	1 cut(s)	1051
BstSCI	CCNGG	4 cut(s)	43, 543, 834, 1666
BstSFI	CTRYAG	2 cut(s)	1404, 1641
BstSLI	GKGCMC	1 cut(s)	1902
BstUI	CGCG	9 cut(s)	203, 275, 327, 497, 509, 550, 638, 653, 722
BstV1I	GCAGC	7 cut(s)	42, 76, 228, 705, 940, 1650, 1777
BstX2I	RGATCY	4 cut(s)	55, 917, 1337, 1441
BstXI	CCANNNNNNTGG	1 cut(s)	1976
BstYI	RGATCY	4 cut(s)	55, 917, 1337, 1441
Bsu15I	ATCGAT	2 cut(s)	927, 943
BsuRI	GGCC	9 cut(s)	113, 119, 353, 566, 587, 731, 1569, 1774, 2026
BsuTUI	ATCGAT	2 cut(s)	927, 943
BtgI	CCRYGG	2 cut(s)	114, 747
BtsCI	GGATG	3 cut(s)	1390, 1591, 1753
BtsI	GCAGTG	1 cut(s)	1056
BtsIMutI	CAGTG	3 cut(s)	854, 1056, 1632
BveI	ACCTGC	1 cut(s)	86
Cfr10I	RCCGGY	2 cut(s)	217, 629
Cfr13I	GGNCC	6 cut(s)	730, 1026, 1126, 1772, 1948, 1981
ClaI	ATCGAT	2 cut(s)	927, 943
CseI	GACGC	7 cut(s)	192, 209, 281, 371, 403, 512, 627
Csp6I	GTAC	3 cut(s)	1286, 1562, 1889
CspCI	CAANNNNNGTGG	2 cut(s)	1309, 1344
CviAII	CATG	8 cut(s)	115, 376, 1165, 1196, 1267, 1565, 1653, 1874
CviQI	GTAC	3 cut(s)	1286, 1562, 1889
DinI	GGCGCC	3 cut(s)	282, 628, 768
DrdI	GACNNNNNNGTC	3 cut(s)	253, 341, 707
DriI	GACNNNNNGTC	1 cut(s)	205
DseDI	GACNNNNNNGTC	3 cut(s)	253, 341, 707
EaeI	YGGCCR	3 cut(s)	111, 117, 564
Eam1104I	CTCTTC	2 cut(s)	1186, 1295
Eam1105I	GACNNNNNGTC	1 cut(s)	205
EarI	CTCTTC	2 cut(s)	1186, 1295
EciI	GGCGGA	3 cut(s)	305, 328, 767
Eco130I	CCWWGG	5 cut(s)	114, 588, 1428, 1727, 1933
Eco24I	GRGCYC	1 cut(s)	1427
Eco31I	GGTCTC	1 cut(s)	1350
Eco47I	GGWCC	4 cut(s)	1026, 1126, 1948, 1981
Eco57I	CTGAAG	3 cut(s)	80, 440, 1276
Eco88I	CYCGRG	3 cut(s)	554, 1347, 1882
Eco91I	GGTNACC	1 cut(s)	1051
EcoO109I	RGGNCCY	3 cut(s)	730, 1026, 1981
EcoO65I	GGTNACC	1 cut(s)	1051
EcoRI	GAATTC	1 cut(s)	1543
EcoRII	CCWGG	2 cut(s)	543, 1666
EcoT14I	CCWWGG	5 cut(s)	114, 588, 1428, 1727, 1933
EcoT38I	GRGCYC	1 cut(s)	1427
EgeI	GGCGCC	3 cut(s)	282, 628, 768
EheI	GGCGCC	3 cut(s)	282, 628, 768
ErhI	CCWWGG	5 cut(s)	114, 588, 1428, 1727, 1933
FaeI	CATG	8 cut(s)	118, 379, 1168, 1199, 1270, 1568, 1656, 1877
FaqI	GGGAC	3 cut(s)	998, 1012, 1967
FatI	CATG	8 cut(s)	114, 375, 1164, 1195, 1266, 1564, 1652, 1873
FauI	CCCGC	3 cut(s)	41, 42, 60
FblI	GTMKAC	1 cut(s)	1802
FokI	GGATG	3 cut(s)	1397, 1598, 1740
FriOI	GRGCYC	1 cut(s)	1427
FspBI	CTAG	4 cut(s)	12, 26, 144, 1965
FspI	TGCGCA	1 cut(s)	1461
GsaI	CCCAGC	1 cut(s)	1773
GsuI	CTGGAG	3 cut(s)	152, 878, 1493
HaeII	RGCGCY	6 cut(s)	284, 482, 599, 630, 770, 1583
HaeIII	GGCC	9 cut(s)	113, 119, 353, 566, 587, 731, 1569, 1774, 2026
HapII	CCGG	7 cut(s)	44, 218, 398, 512, 630, 808, 835
HgaI	GACGC	7 cut(s)	192, 209, 281, 371, 403, 512, 627
Hin1I	GRCGYC	6 cut(s)	281, 363, 395, 504, 627, 767
Hin1II	CATG	8 cut(s)	118, 379, 1168, 1199, 1270, 1568, 1656, 1877
HindIII	AAGCTT	1 cut(s)	780
HpaII	CCGG	7 cut(s)	44, 218, 398, 512, 630, 808, 835
HphI	GGTGA	3 cut(s)	232, 835, 1063
Hpy166II	GTNNAC	5 cut(s)	361, 1286, 1417, 1803, 1957
Hpy8I	GTNNAC	5 cut(s)	361, 1286, 1417, 1803, 1957
HpyAV	CCTTC	7 cut(s)	820, 862, 1041, 1180, 1614, 1703, 2016
HpyCH4III	ACNGT	8 cut(s)	101, 255, 310, 1012, 1043, 1304, 1800, 1852
HpyCH4IV	ACGT	2 cut(s)	173, 1282
HpyCH4V	TGCA	9 cut(s)	138, 186, 854, 1199, 1259, 1406, 1643, 1659, 1844
HpySE526I	ACGT	2 cut(s)	173, 1282
Hsp92I	GRCGYC	6 cut(s)	281, 363, 395, 504, 627, 767
Hsp92II	CATG	8 cut(s)	118, 379, 1168, 1199, 1270, 1568, 1656, 1877
KasI	GGCGCC	3 cut(s)	280, 626, 766
KflI	GGGWCCC	1 cut(s)	1981
KroI	GCCGGC	1 cut(s)	629
KroNI	GCCGGC	1 cut(s)	631
LmnI	GCTCC	4 cut(s)	448, 540, 615, 907
Lsp1109I	GCAGC	7 cut(s)	42, 76, 228, 705, 940, 1650, 1777
LweI	GCATC	3 cut(s)	1375, 1774, 2012
MaeI	CTAG	4 cut(s)	12, 26, 144, 1965
MaeII	ACGT	2 cut(s)	173, 1282
MaeIII	GTNAC	2 cut(s)	101, 1051
MboII	GAAGA	5 cut(s)	912, 1173, 1282, 1286, 1421
MflI	RGATCY	4 cut(s)	55, 917, 1337, 1441
MhlI	GDGCHC	4 cut(s)	609, 1254, 1427, 1902
MlsI	TGGCCA	3 cut(s)	113, 119, 566
MluI	ACGCGT	1 cut(s)	201
MluNI	TGGCCA	3 cut(s)	113, 119, 566
Mly113I	GGCGCC	3 cut(s)	281, 627, 767
MlyI	GAGTC	5 cut(s)	170, 329, 449, 985, 1373
MmeI	TCCRAC	5 cut(s)	33, 483, 636, 1104, 2012
Mox20I	TGGCCA	3 cut(s)	113, 119, 566
MreI	CGCCGGCG	1 cut(s)	629
MroNI	GCCGGC	1 cut(s)	629
MroXI	GAANNNNTTC	1 cut(s)	872
MscI	TGGCCA	3 cut(s)	113, 119, 566
MseI	TTAA	2 cut(s)	123, 1809
MslI	CAYNNNNRTG	1 cut(s)	1200
Msp20I	TGGCCA	3 cut(s)	113, 119, 566
MspA1I	CMGCKG	4 cut(s)	67, 427, 532, 1790
MspI	CCGG	7 cut(s)	44, 218, 398, 512, 630, 808, 835
MspR9I	CCNGG	4 cut(s)	45, 545, 836, 1668
Mva1269I	GAATGC	3 cut(s)	186, 799, 1771
MvaI	CCWGG	2 cut(s)	545, 1668
MvnI	CGCG	9 cut(s)	203, 275, 327, 497, 509, 550, 638, 653, 722
NaeI	GCCGGC	1 cut(s)	631
NarI	GGCGCC	3 cut(s)	281, 627, 767
NciI	CCSGG	2 cut(s)	45, 836
NcoI	CCATGG	1 cut(s)	114
NgoMIV	GCCGGC	1 cut(s)	629
NheI	GCTAGC	1 cut(s)	1964
NlaIII	CATG	8 cut(s)	118, 379, 1168, 1199, 1270, 1568, 1656, 1877
NmeAIII	GCCGAG	1 cut(s)	455
NmuCI	GTSAC	2 cut(s)	101, 1051
NsbI	TGCGCA	1 cut(s)	1461
NspI	RCATGY	1 cut(s)	1656
NspV	TTCGAA	1 cut(s)	1184
PaeR7I	CTCGAG	2 cut(s)	1347, 1882
PciI	ACATGT	1 cut(s)	1652
PcsI	WCGNNNNNNNCGW	3 cut(s)	170, 245, 672
PctI	GAATGC	3 cut(s)	186, 799, 1771
PdiI	GCCGGC	1 cut(s)	631
PdmI	GAANNNNTTC	1 cut(s)	872
PfeI	GAWTC	6 cut(s)	18, 884, 1235, 1515, 1624, 1637
PflFI	GACNNNGTC	1 cut(s)	365
PflMI	CCANNNNNTGG	1 cut(s)	1695
PfoI	TCCNGGA	1 cut(s)	834
Ple19I	CGATCG	1 cut(s)	501
PleI	GAGTC	5 cut(s)	169, 329, 449, 985, 1373
PluTI	GGCGCC	3 cut(s)	284, 630, 770
PpsI	GAGTC	5 cut(s)	169, 329, 449, 985, 1373
PpuMI	RGGWCCY	2 cut(s)	1026, 1981
PscI	ACATGT	1 cut(s)	1652
Psp5II	RGGWCCY	2 cut(s)	1026, 1981
Psp6I	CCWGG	2 cut(s)	543, 1666
PspEI	GGTNACC	1 cut(s)	1051
PspFI	CCCAGC	1 cut(s)	1769
PspGI	CCWGG	2 cut(s)	543, 1666
PspPI	GGNCC	6 cut(s)	730, 1026, 1126, 1772, 1948, 1981
PspPPI	RGGWCCY	2 cut(s)	1026, 1981
PspXI	VCTCGAGB	1 cut(s)	1882
PstI	CTGCAG	2 cut(s)	1408, 1645
PsuI	RGATCY	4 cut(s)	55, 917, 1337, 1441
PsyI	GACNNNGTC	1 cut(s)	365
PvuI	CGATCG	1 cut(s)	501
PvuII	CAGCTG	1 cut(s)	532
RsaI	GTAC	3 cut(s)	1287, 1563, 1890
RsaNI	GTAC	3 cut(s)	1286, 1562, 1889
RseI	CAYNNNNRTG	1 cut(s)	1200
SaqAI	TTAA	2 cut(s)	123, 1809
Sau96I	GGNCC	6 cut(s)	730, 1026, 1126, 1772, 1948, 1981
SchI	GAGTC	5 cut(s)	170, 329, 449, 985, 1373
ScrFI	CCNGG	4 cut(s)	45, 545, 836, 1668
SduI	GDGCHC	4 cut(s)	609, 1254, 1427, 1902
SfaNI	GCATC	3 cut(s)	1375, 1774, 2012
SfcI	CTRYAG	2 cut(s)	1404, 1641
SfoI	GGCGCC	3 cut(s)	282, 628, 768
Sfr274I	CTCGAG	2 cut(s)	1347, 1882
SfuI	TTCGAA	1 cut(s)	1184
SgrAI	CRCCGGYG	2 cut(s)	217, 629
SinI	GGWCC	4 cut(s)	1026, 1126, 1948, 1981
SlaI	CTCGAG	2 cut(s)	1347, 1882
SmiMI	CAYNNNNRTG	1 cut(s)	1200
SmlI	CTYRAG	5 cut(s)	1347, 1550, 1571, 1681, 1882
SmoI	CTYRAG	5 cut(s)	1347, 1550, 1571, 1681, 1882
SspDI	GGCGCC	3 cut(s)	280, 626, 766
SspMI	CTAG	4 cut(s)	12, 26, 144, 1965
StyD4I	CCNGG	4 cut(s)	43, 543, 834, 1666
StyI	CCWWGG	5 cut(s)	114, 588, 1428, 1727, 1933
TaaI	ACNGT	8 cut(s)	101, 255, 310, 1012, 1043, 1304, 1800, 1852
TaiI	ACGT	2 cut(s)	176, 1285
TaqII	GACCGA	1 cut(s)	1332
TatI	WGTACW	1 cut(s)	1285
TfiI	GAWTC	6 cut(s)	18, 884, 1235, 1515, 1624, 1637
Tru1I	TTAA	2 cut(s)	123, 1809
Tru9I	TTAA	2 cut(s)	123, 1809
TscAI	CASTG	3 cut(s)	861, 1063, 1639
TseFI	GTSAC	2 cut(s)	101, 1051
TseI	GCWGC	7 cut(s)	30, 64, 241, 693, 953, 1663, 1790
Tsp45I	GTSAC	2 cut(s)	101, 1051
TspDTI	ATGAA	7 cut(s)	860, 1023, 1323, 1507, 1602, 1778, 1862
TspGWI	ACGGA	1 cut(s)	1445
TspRI	CASTG	3 cut(s)	861, 1063, 1639
Tth111I	GACNNNGTC	1 cut(s)	365
Van91I	CCANNNNNTGG	1 cut(s)	1695
VpaK11BI	GGWCC	4 cut(s)	1026, 1126, 1948, 1981
XapI	RAATTY	5 cut(s)	1322, 1447, 1525, 1543, 1869
XceI	RCATGY	1 cut(s)	1656
XcmI	CCANNNNNNNNNTGG	2 cut(s)	127, 1517
XhoI	CTCGAG	2 cut(s)	1347, 1882
XmiI	GTMKAC	1 cut(s)	1802
XmnI	GAANNNNTTC	1 cut(s)	872
XspI	CTAG	4 cut(s)	12, 26, 144, 1965

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.