Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr4B

Orthogroup ID

OG0007666

Physical Location & Seq

Genomic Coordinates Forward (+)

57285810 .. 57291434

Gene Structure 5625 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh4BG429700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1548 bp

ATGTCTGGCTCGAGGCGATTCTCGCTGGGCAGCCCGCCACAGCCGGGCGGGTCGGATCTGAAGCAGCGGGTCATAACCTGCCTCAACAAACTCTCCGACCGTGACACTCTGGCCATGGCCATTAACGAGCTGGAGTGCATAGCTAGAAATCTCACACAAGAGTCGTTTGCTACGTTTTTGATCTGCATTCACAACACCGACTCGTCGTCGAAGCCGCCGGTGAGGAAGCAATGCGTGTCGCTGCTGACGATACTGTCGAATTCACACGGCGACGCGTTGGCGCCGTTTCTGTCGAAAATGATCTCCACCGTCCTCCGCCGCCTCCGCGACCCCGACTCCGCCGTCCGATTGGCCTGCGTGGACGCCGTCGCCGCCATGTCGTCCAAGATCACGACGCCGGAGTTCGCCTCGTCGTTTCTGAAGCCGCTGATGGACACGCTGGCGGTGGAGCAGGACTCCAACTCGCAGATCGGCTCGGCGCTCTGCCTCGCCGCCGCGATCGACGCAGCGCCGGAGGTGGAGATGGCCCAGCTGAGGAGGAGCCTGGCGCGGCTCGGGAAGCTGGCCAAGAGCGACGGCTTCAAGGCCAAGGCGGCGCTGATGGTGCTCATAGGGAGCATTGTCGGCGCCGGCGGCGCGTCGAGCAAAGGCGCGTTGGATTGGCTCGTGCCGTGCGTGGTGGAGTTTCTGAGCAGCGACGACTGGGCGGTCAGAAAGGGCGCGGCTGAGGCCCTCGGAAAAGTAGCCACGGCGGAGACAGAGTTGGCGCCACTCTATAAAGCTTGTTGCTTGAATGCTTTGGAAAGCCGGAGATTTGATAAGGTGAAGGTAGTCCGGGAGACTATGAACAATGCATTGGAGATGTGGAAGGTTTTCGCAGGCGATTCCGAGGAGGTTTCTGCTCCAATTCAATCCAGATCTTCAATCGATAATGAGAATGATCGATCCTTTGCTGCCGTATCGAAAAGTTCAAATGATGCTGGCTTTAGGACTCCTCAGACAAAGAAAACAGTCCCCACAAACAGGTCCCCTCCATCTAACGGTTCTTTGGTGACCACTGCCAAAAAGGGAAGTCCTCAAAGTAGATATGAGAGAAGTTCAGACACAACCAAGCTCAATAAGTTGGACCACAAGAAACCCTCTGATTGGAAAATTGAAATTGCAATGCCAAACTCTGCCTCTTCGAAGGTGTCTCATGCAGATGATATTGTTGCGAGTGATTTTGGAGATGGGGAATCAGGAAAGAATGAGCACAATGCAAATAGCATGGCAGAAGATAAACGAGTACTCTTCAGTAGGAACCGTGATGAAAAAGCATACAAATTTGGTGGTTTGAGATCTCGGTCTCGAGTAGTTCCATTTGATGATGAGAACTATGACTCGGATGCTGTGGTTTGTAATCCTGCAGAAGAAGTTTACGAGAGCCCCAAGGAGGCTGAGGATCTGAATTTGATCCGTGCGCAACTCATTCAGATTGAAAACCAGCAAGCCAACCTATTTGACCTCCTCCAGGTAATGCTCCTGATGCCTGTTCACCTTTTATTTTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005856 GO:0005874 GO:0008017 GO:0008092 GO:0015630 GO:0015631 GO:0043226 GO:0043228 GO:0043229 GO:0043232 GO:0044422 GO:0044424 GO:0044430 GO:0044446 GO:0044464 GO:0099080 GO:0099081 GO:0099512 GO:0099513

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Cohesin_HEAT HEAT

Protein Analysis

515

Amino Acids

55.94

Weight (kDa)

6.64

Isoelectric Point (pI)

57.55

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
TOR1L1_N	PF24714	19 - 290	3.7e-112	TORTIFOLIA1 N-terminal
HEAT_EF3_N	PF24987	63 - 172	9.7e-06	EF3 N-terminal HEAT repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0007666)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G27210 AT1G59850
fragaria_vesca	FvH4_4g35310 FvH4_4g35310 FvH4_4g35310
malus_domestica	MD13G1084500.v1.1 MD16G1083600.v1.1
prunus_persica	Prupe.1G262400_v2.0.a1
pyrus_communis	pycom13g07290 pycom16g07250
rosa_chinensis	RchiOBHm_Chr4g0444931
rosa_laevigata	RLG00000005786
rosa_multiflora	Rmu_co8293673.1_g000001 Rmu_sc0010689.1_g000001 Rmu_sc0011561.1_g000001 Rmu_sc0026285.1_g000001
rosa_roxburghii	Rroxscaffold_5G00385420
rosa_rugosa	Rorug04G0356500 Rorug04G0356500
rosa_samantha	Rh4AG418000 Rh4BG429700 Rh4CG444500 Rh4DG425700
rosa_wichuraiana	Rw4G035820

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	3 cut(s)	253, 341, 707
Acc16I	TGCGCA	1 cut(s)	1461
Acc36I	ACCTGC	1 cut(s)	86
AccB1I	GGYRCC	3 cut(s)	280, 626, 766
AccII	CGCG	7 cut(s)	275, 327, 497, 550, 638, 653, 722
AclWI	GGATC	4 cut(s)	63, 939, 1447, 1449
AcoI	YGGCCR	3 cut(s)	111, 117, 564
AcsI	RAATTY	3 cut(s)	259, 1322, 1447
AcuI	CTGAAG	3 cut(s)	80, 440, 1276
AcyI	GRCGYC	5 cut(s)	281, 363, 395, 627, 767
AfaI	GTAC	1 cut(s)	1287
AfiI	CCNNNNNNNGG	7 cut(s)	44, 534, 1023, 1040, 1146, 1432, 1510
AflIII	ACRYGT	1 cut(s)	273
AgsI	TTSAA	7 cut(s)	583, 793, 911, 924, 972, 1157, 1478
AhdI	GACNNNNNGTC	1 cut(s)	205
AjnI	CCWGG	2 cut(s)	543, 1509
AjuI	GAANNNNNNNTTGG	2 cut(s)	839, 871
AluBI	AGCT	6 cut(s)	130, 143, 532, 562, 782, 1114
AluI	AGCT	6 cut(s)	130, 143, 532, 562, 782, 1114
Alw21I	GWGCWC	2 cut(s)	609, 1254
Alw26I	GTCTC	4 cut(s)	749, 833, 1197, 1350
AlwI	GGATC	4 cut(s)	63, 939, 1447, 1449
Ama87I	CYCGRG	3 cut(s)	10, 554, 1347
AoxI	GGCC	7 cut(s)	111, 117, 351, 525, 564, 585, 729
ApeKI	GCWGC	6 cut(s)	30, 64, 241, 506, 693, 953
ApoI	RAATTY	3 cut(s)	259, 1322, 1447
Asp700I	GAANNNNTTC	1 cut(s)	872
AspS9I	GGNCC	4 cut(s)	526, 730, 1026, 1126
AsuC2I	CCSGG	2 cut(s)	45, 836
AsuHPI	GGTGA	4 cut(s)	232, 835, 1063, 1526
AsuII	TTCGAA	1 cut(s)	1184
AvaI	CYCGRG	3 cut(s)	10, 554, 1347
AvaII	GGWCC	2 cut(s)	1026, 1126
BalI	TGGCCA	3 cut(s)	113, 119, 566
BanI	GGYRCC	3 cut(s)	280, 626, 766
BanII	GRGCYC	1 cut(s)	1427
BauI	CACGAG	1 cut(s)	665
Bbv12I	GWGCWC	2 cut(s)	609, 1254
BbvCI	CCTCAGC	3 cut(s)	533, 726, 1437
BbvI	GCAGC	6 cut(s)	42, 76, 228, 518, 705, 940
BccI	CCATC	5 cut(s)	424, 517, 595, 1042, 1223
BceAI	ACGGC	8 cut(s)	268, 283, 326, 350, 592, 655, 765, 941
BcgI	CGANNNNNNTGC	2 cut(s)	336, 370
BciT130I	CCWGG	2 cut(s)	545, 1511
BcnI	CCSGG	2 cut(s)	45, 836
BcoDI	GTCTC	4 cut(s)	749, 833, 1197, 1350
BfaI	CTAG	1 cut(s)	144
BfmI	CTRYAG	1 cut(s)	1404
BfoI	RGCGCY	6 cut(s)	284, 482, 512, 599, 630, 770
BfuAI	ACCTGC	1 cut(s)	86
BglI	GCCNNNNNGGC	1 cut(s)	593
BglII	AGATCT	2 cut(s)	917, 1337
BmcAI	AGTACT	1 cut(s)	1287
Bme1390I	CCNGG	4 cut(s)	45, 545, 836, 1511
Bme18I	GGWCC	2 cut(s)	1026, 1126
BmeRI	GACNNNNNGTC	1 cut(s)	205
BmeT110I	CYCGRG	3 cut(s)	10, 554, 1347
BmgT120I	GGNCC	4 cut(s)	526, 730, 1026, 1126
BmiI	GGNNCC	6 cut(s)	282, 542, 628, 768, 1028, 1301
BmrFI	CCNGG	4 cut(s)	45, 545, 836, 1511
BmrI	ACTGGG	1 cut(s)	712
BmsI	GCATC	3 cut(s)	967, 1375, 1515
BmuI	ACTGGG	1 cut(s)	712
BplI	GAGNNNNNCTC	4 cut(s)	392, 424, 440, 472
BpmI	CTGGAG	2 cut(s)	152, 1493
Bpu10I	CCTNAGC	3 cut(s)	533, 726, 1437
Bpu14I	TTCGAA	1 cut(s)	1184
BpuMI	CCSGG	2 cut(s)	45, 836
Bsa29I	ATCGAT	2 cut(s)	927, 943
BsaHI	GRCGYC	5 cut(s)	281, 363, 395, 627, 767
BsaI	GGTCTC	1 cut(s)	1350
BsaJI	CCNNGG	6 cut(s)	114, 588, 733, 747, 888, 1428
BsaXI	ACNNNNNCTCC	6 cut(s)	77, 107, 320, 350, 746, 776
Bsc4I	CCNNNNNNNGG	7 cut(s)	44, 534, 1023, 1040, 1146, 1432, 1510
Bse118I	RCCGGY	2 cut(s)	217, 629
Bse1I	ACTGG	1 cut(s)	707
Bse3DI	GCAATG	2 cut(s)	236, 1170
BseBI	CCWGG	2 cut(s)	545, 1511
BseCI	ATCGAT	2 cut(s)	927, 943
BseDI	CCNNGG	6 cut(s)	114, 588, 733, 747, 888, 1428
BseGI	GGATG	1 cut(s)	1390
BseLI	CCNNNNNNNGG	7 cut(s)	44, 534, 1023, 1040, 1146, 1432, 1510
BseMI	GCAATG	2 cut(s)	236, 1170
BseMII	CTCAG	5 cut(s)	524, 680, 717, 1010, 1428
BseNI	ACTGG	1 cut(s)	707
BseRI	GAGGAG	5 cut(s)	550, 553, 905, 984, 1496
BseXI	GCAGC	6 cut(s)	42, 76, 228, 518, 705, 940
BseYI	CCCAGC	2 cut(s)	25, 528
Bsh1236I	CGCG	7 cut(s)	275, 327, 497, 550, 638, 653, 722
Bsh1285I	CGRYCG	2 cut(s)	100, 501
BshFI	GGCC	7 cut(s)	113, 119, 353, 527, 566, 587, 731
BshNI	GGYRCC	3 cut(s)	280, 626, 766
BshVI	ATCGAT	2 cut(s)	927, 943
BsiEI	CGRYCG	2 cut(s)	100, 501
BsiHKAI	GWGCWC	2 cut(s)	609, 1254
BsiHKCI	CYCGRG	3 cut(s)	10, 554, 1347
BsiSI	CCGG	7 cut(s)	44, 218, 398, 512, 630, 808, 835
BslFI	GGGAC	2 cut(s)	998, 1012
BslI	CCNNNNNNNGG	7 cut(s)	44, 534, 1023, 1040, 1146, 1432, 1510
BsmAI	GTCTC	4 cut(s)	749, 833, 1197, 1350
BsmFI	GGGAC	2 cut(s)	998, 1012
BsmI	GAATGC	2 cut(s)	186, 799
BsnI	GGCC	7 cut(s)	113, 119, 353, 527, 566, 587, 731
Bso31I	GGTCTC	1 cut(s)	1350
BsoBI	CYCGRG	3 cut(s)	10, 554, 1347
Bsp119I	TTCGAA	1 cut(s)	1184
Bsp1286I	GDGCHC	3 cut(s)	609, 1254, 1427
Bsp19I	CCATGG	1 cut(s)	114
BspANI	GGCC	7 cut(s)	113, 119, 353, 527, 566, 587, 731
BspCNI	CTCAG	5 cut(s)	525, 681, 718, 1009, 1429
BspDI	ATCGAT	2 cut(s)	927, 943
BspFNI	CGCG	7 cut(s)	275, 327, 497, 550, 638, 653, 722
BspLI	GGNNCC	6 cut(s)	282, 542, 628, 768, 1028, 1301
BspMAI	CTGCAG	1 cut(s)	1408
BspMI	ACCTGC	1 cut(s)	86
BspPI	GGATC	4 cut(s)	63, 939, 1447, 1449
BspT104I	TTCGAA	1 cut(s)	1184
BspT107I	GGYRCC	3 cut(s)	280, 626, 766
BspTNI	GGTCTC	1 cut(s)	1350
BsrDI	GCAATG	2 cut(s)	236, 1170
BsrFI	RCCGGY	2 cut(s)	217, 629
BsrI	ACTGG	1 cut(s)	707
BssAI	RCCGGY	2 cut(s)	217, 629
BssECI	CCNNGG	6 cut(s)	114, 588, 733, 747, 888, 1428
BssNI	GRCGYC	5 cut(s)	281, 363, 395, 627, 767
BssSI	CACGAG	1 cut(s)	665
BssT1I	CCWWGG	3 cut(s)	114, 588, 1428
Bst2BI	CACGAG	1 cut(s)	665
Bst2UI	CCWGG	2 cut(s)	545, 1511
Bst4CI	ACNGT	6 cut(s)	101, 255, 310, 1012, 1043, 1304
Bst6I	CTCTTC	2 cut(s)	1186, 1295
BstACI	GRCGYC	5 cut(s)	281, 363, 395, 627, 767
BstBI	TTCGAA	1 cut(s)	1184
BstC8I	GCNNGC	8 cut(s)	35, 355, 441, 564, 631, 880, 982, 1488
BstDEI	CTNAG	5 cut(s)	533, 689, 726, 996, 1437
BstDSI	CCRYGG	2 cut(s)	114, 747
BstEII	GGTNACC	1 cut(s)	1051
BstENI	CCTNNNNNAGG	1 cut(s)	1508
BstF5I	GGATG	1 cut(s)	1390
BstFNI	CGCG	7 cut(s)	275, 327, 497, 550, 638, 653, 722
BstH2I	RGCGCY	6 cut(s)	284, 482, 512, 599, 630, 770
BstMAI	GTCTC	4 cut(s)	749, 833, 1197, 1350
BstMCI	CGRYCG	2 cut(s)	100, 501
BstNI	CCWGG	2 cut(s)	545, 1511
BstPI	GGTNACC	1 cut(s)	1051
BstSCI	CCNGG	4 cut(s)	43, 543, 834, 1509
BstSFI	CTRYAG	1 cut(s)	1404
BstUI	CGCG	7 cut(s)	275, 327, 497, 550, 638, 653, 722
BstV1I	GCAGC	6 cut(s)	42, 76, 228, 518, 705, 940
BstX2I	RGATCY	4 cut(s)	55, 917, 1337, 1441
BstYI	RGATCY	4 cut(s)	55, 917, 1337, 1441
Bsu15I	ATCGAT	2 cut(s)	927, 943
BsuRI	GGCC	7 cut(s)	113, 119, 353, 527, 566, 587, 731
BsuTUI	ATCGAT	2 cut(s)	927, 943
BtgI	CCRYGG	2 cut(s)	114, 747
BtsCI	GGATG	1 cut(s)	1390
BtsI	GCAGTG	1 cut(s)	1056
BtsIMutI	CAGTG	1 cut(s)	1056
BveI	ACCTGC	1 cut(s)	86
Cac8I	GCNNGC	8 cut(s)	35, 355, 441, 564, 631, 880, 982, 1488
Cfr10I	RCCGGY	2 cut(s)	217, 629
Cfr13I	GGNCC	4 cut(s)	526, 730, 1026, 1126
ClaI	ATCGAT	2 cut(s)	927, 943
CseI	GACGC	5 cut(s)	281, 371, 403, 512, 627
Csp6I	GTAC	1 cut(s)	1286
CspCI	CAANNNNNGTGG	2 cut(s)	1309, 1344
CviAII	CATG	4 cut(s)	115, 376, 1196, 1267
CviQI	GTAC	1 cut(s)	1286
DdeI	CTNAG	5 cut(s)	533, 689, 726, 996, 1437
DinI	GGCGCC	3 cut(s)	282, 628, 768
DrdI	GACNNNNNNGTC	3 cut(s)	253, 341, 707
DriI	GACNNNNNGTC	1 cut(s)	205
DseDI	GACNNNNNNGTC	3 cut(s)	253, 341, 707
EaeI	YGGCCR	3 cut(s)	111, 117, 564
Eam1104I	CTCTTC	2 cut(s)	1186, 1295
Eam1105I	GACNNNNNGTC	1 cut(s)	205
EarI	CTCTTC	2 cut(s)	1186, 1295
EciI	GGCGGA	3 cut(s)	305, 328, 767
Eco130I	CCWWGG	3 cut(s)	114, 588, 1428
Eco24I	GRGCYC	1 cut(s)	1427
Eco31I	GGTCTC	1 cut(s)	1350
Eco47I	GGWCC	2 cut(s)	1026, 1126
Eco57I	CTGAAG	3 cut(s)	80, 440, 1276
Eco88I	CYCGRG	3 cut(s)	10, 554, 1347
Eco91I	GGTNACC	1 cut(s)	1051
EcoNI	CCTNNNNNAGG	1 cut(s)	1508
EcoO109I	RGGNCCY	2 cut(s)	730, 1026
EcoO65I	GGTNACC	1 cut(s)	1051
EcoRI	GAATTC	1 cut(s)	259
EcoRII	CCWGG	2 cut(s)	543, 1509
EcoT14I	CCWWGG	3 cut(s)	114, 588, 1428
EcoT22I	ATGCAT	1 cut(s)	856
EcoT38I	GRGCYC	1 cut(s)	1427
EgeI	GGCGCC	3 cut(s)	282, 628, 768
EheI	GGCGCC	3 cut(s)	282, 628, 768
ErhI	CCWWGG	3 cut(s)	114, 588, 1428
FaeI	CATG	4 cut(s)	118, 379, 1199, 1270
FaqI	GGGAC	2 cut(s)	998, 1012
FatI	CATG	4 cut(s)	114, 375, 1195, 1266
FauI	CCCGC	3 cut(s)	41, 42, 60
FokI	GGATG	1 cut(s)	1397
FriOI	GRGCYC	1 cut(s)	1427
FspBI	CTAG	1 cut(s)	144
FspI	TGCGCA	1 cut(s)	1461
GsaI	CCCAGC	2 cut(s)	29, 532
GsuI	CTGGAG	2 cut(s)	152, 1493
HaeII	RGCGCY	6 cut(s)	284, 482, 512, 599, 630, 770
HaeIII	GGCC	7 cut(s)	113, 119, 353, 527, 566, 587, 731
HapII	CCGG	7 cut(s)	44, 218, 398, 512, 630, 808, 835
HgaI	GACGC	5 cut(s)	281, 371, 403, 512, 627
Hin1I	GRCGYC	5 cut(s)	281, 363, 395, 627, 767
Hin1II	CATG	4 cut(s)	118, 379, 1199, 1270
HindIII	AAGCTT	1 cut(s)	780
HinfI	GANTC	9 cut(s)	18, 161, 200, 335, 455, 884, 991, 1235, 1379
HpaII	CCGG	7 cut(s)	44, 218, 398, 512, 630, 808, 835
HphI	GGTGA	4 cut(s)	232, 835, 1063, 1526
Hpy166II	GTNNAC	3 cut(s)	361, 1417, 1534
Hpy188III	TCNNGA	6 cut(s)	391, 556, 915, 1239, 1347, 1522
Hpy8I	GTNNAC	3 cut(s)	361, 1417, 1534
HpyAV	CCTTC	3 cut(s)	820, 862, 1180
HpyCH4III	ACNGT	6 cut(s)	101, 255, 310, 1012, 1043, 1304
HpyCH4IV	ACGT	1 cut(s)	173
HpyCH4V	TGCA	7 cut(s)	138, 186, 854, 1163, 1199, 1259, 1406
HpyF3I	CTNAG	5 cut(s)	533, 689, 726, 996, 1437
HpySE526I	ACGT	1 cut(s)	173
Hsp92I	GRCGYC	5 cut(s)	281, 363, 395, 627, 767
Hsp92II	CATG	4 cut(s)	118, 379, 1199, 1270
KasI	GGCGCC	3 cut(s)	280, 626, 766
KroI	GCCGGC	1 cut(s)	629
KroNI	GCCGGC	1 cut(s)	631
LmnI	GCTCC	5 cut(s)	448, 540, 615, 907, 1524
Lsp1109I	GCAGC	6 cut(s)	42, 76, 228, 518, 705, 940
LweI	GCATC	3 cut(s)	967, 1375, 1515
MaeI	CTAG	1 cut(s)	144
MaeII	ACGT	1 cut(s)	173
MaeIII	GTNAC	2 cut(s)	101, 1051
MboII	GAAGA	5 cut(s)	912, 1173, 1282, 1286, 1421
MflI	RGATCY	4 cut(s)	55, 917, 1337, 1441
MhlI	GDGCHC	3 cut(s)	609, 1254, 1427
MlsI	TGGCCA	3 cut(s)	113, 119, 566
MluCI	AATT	6 cut(s)	259, 906, 1152, 1158, 1322, 1447
MluI	ACGCGT	1 cut(s)	273
MluNI	TGGCCA	3 cut(s)	113, 119, 566
Mly113I	GGCGCC	3 cut(s)	281, 627, 767
MlyI	GAGTC	6 cut(s)	170, 194, 329, 449, 985, 1373
MmeI	TCCRAC	5 cut(s)	33, 120, 483, 636, 1104
Mox20I	TGGCCA	3 cut(s)	113, 119, 566
Mph1103I	ATGCAT	1 cut(s)	856
MreI	CGCCGGCG	1 cut(s)	629
MroNI	GCCGGC	1 cut(s)	629
MroXI	GAANNNNTTC	1 cut(s)	872
MscI	TGGCCA	3 cut(s)	113, 119, 566
MseI	TTAA	2 cut(s)	123, 1546
MslI	CAYNNNNRTG	1 cut(s)	1200
Msp20I	TGGCCA	3 cut(s)	113, 119, 566
MspA1I	CMGCKG	3 cut(s)	67, 427, 532
MspI	CCGG	7 cut(s)	44, 218, 398, 512, 630, 808, 835
MspR9I	CCNGG	4 cut(s)	45, 545, 836, 1511
Mva1269I	GAATGC	2 cut(s)	186, 799
MvaI	CCWGG	2 cut(s)	545, 1511
MvnI	CGCG	7 cut(s)	275, 327, 497, 550, 638, 653, 722
NaeI	GCCGGC	1 cut(s)	631
NarI	GGCGCC	3 cut(s)	281, 627, 767
NciI	CCSGG	2 cut(s)	45, 836
NcoI	CCATGG	1 cut(s)	114
NgoMIV	GCCGGC	1 cut(s)	629
NlaIII	CATG	4 cut(s)	118, 379, 1199, 1270
NlaIV	GGNNCC	6 cut(s)	282, 542, 628, 768, 1028, 1301
NmeAIII	GCCGAG	1 cut(s)	455
NmuCI	GTSAC	2 cut(s)	101, 1051
NsbI	TGCGCA	1 cut(s)	1461
NsiI	ATGCAT	1 cut(s)	856
NspV	TTCGAA	1 cut(s)	1184
PaeR7I	CTCGAG	2 cut(s)	10, 1347
PcsI	WCGNNNNNNNCGW	4 cut(s)	170, 245, 254, 672
PctI	GAATGC	2 cut(s)	186, 799
PdiI	GCCGGC	1 cut(s)	631
PdmI	GAANNNNTTC	1 cut(s)	872
PfeI	GAWTC	3 cut(s)	18, 884, 1235
PflFI	GACNNNGTC	1 cut(s)	365
PfoI	TCCNGGA	1 cut(s)	834
Ple19I	CGATCG	1 cut(s)	501
PleI	GAGTC	6 cut(s)	169, 194, 329, 449, 985, 1373
PluTI	GGCGCC	3 cut(s)	284, 630, 770
PpsI	GAGTC	6 cut(s)	169, 194, 329, 449, 985, 1373
PpuMI	RGGWCCY	1 cut(s)	1026
Psp5II	RGGWCCY	1 cut(s)	1026
Psp6I	CCWGG	2 cut(s)	543, 1509
PspEI	GGTNACC	1 cut(s)	1051
PspFI	CCCAGC	2 cut(s)	25, 528
PspGI	CCWGG	2 cut(s)	543, 1509
PspN4I	GGNNCC	6 cut(s)	282, 542, 628, 768, 1028, 1301
PspPI	GGNCC	4 cut(s)	526, 730, 1026, 1126
PspPPI	RGGWCCY	1 cut(s)	1026
PspXI	VCTCGAGB	1 cut(s)	10
PstI	CTGCAG	1 cut(s)	1408
PsuI	RGATCY	4 cut(s)	55, 917, 1337, 1441
PsyI	GACNNNGTC	1 cut(s)	365
PvuI	CGATCG	1 cut(s)	501
PvuII	CAGCTG	1 cut(s)	532
RsaI	GTAC	1 cut(s)	1287
RsaNI	GTAC	1 cut(s)	1286
RseI	CAYNNNNRTG	1 cut(s)	1200
SaqAI	TTAA	2 cut(s)	123, 1546
Sau96I	GGNCC	4 cut(s)	526, 730, 1026, 1126
ScaI	AGTACT	1 cut(s)	1287
SchI	GAGTC	6 cut(s)	170, 194, 329, 449, 985, 1373
ScrFI	CCNGG	4 cut(s)	45, 545, 836, 1511
SduI	GDGCHC	3 cut(s)	609, 1254, 1427
SfaNI	GCATC	3 cut(s)	967, 1375, 1515
SfcI	CTRYAG	1 cut(s)	1404
SfoI	GGCGCC	3 cut(s)	282, 628, 768
Sfr274I	CTCGAG	2 cut(s)	10, 1347
SfuI	TTCGAA	1 cut(s)	1184
SgrAI	CRCCGGYG	2 cut(s)	217, 629
SinI	GGWCC	2 cut(s)	1026, 1126
SlaI	CTCGAG	2 cut(s)	10, 1347
SmiMI	CAYNNNNRTG	1 cut(s)	1200
SmlI	CTYRAG	2 cut(s)	10, 1347
SmoI	CTYRAG	2 cut(s)	10, 1347
Sse9I	AATT	6 cut(s)	259, 906, 1152, 1158, 1322, 1447
SspDI	GGCGCC	3 cut(s)	280, 626, 766
SspMI	CTAG	1 cut(s)	144
StyD4I	CCNGG	4 cut(s)	43, 543, 834, 1509
StyI	CCWWGG	3 cut(s)	114, 588, 1428
TaaI	ACNGT	6 cut(s)	101, 255, 310, 1012, 1043, 1304
TaiI	ACGT	1 cut(s)	176
TaqII	GACCGA	1 cut(s)	1332
TasI	AATT	6 cut(s)	259, 906, 1152, 1158, 1322, 1447
TatI	WGTACW	1 cut(s)	1285
TfiI	GAWTC	3 cut(s)	18, 884, 1235
Tru1I	TTAA	2 cut(s)	123, 1546
Tru9I	TTAA	2 cut(s)	123, 1546
TscAI	CASTG	1 cut(s)	1063
TseFI	GTSAC	2 cut(s)	101, 1051
TseI	GCWGC	6 cut(s)	30, 64, 241, 506, 693, 953
Tsp45I	GTSAC	2 cut(s)	101, 1051
TspDTI	ATGAA	2 cut(s)	860, 1323
TspGWI	ACGGA	1 cut(s)	1445
TspRI	CASTG	1 cut(s)	1063
Tth111I	GACNNNGTC	1 cut(s)	365
VpaK11BI	GGWCC	2 cut(s)	1026, 1126
XagI	CCTNNNNNAGG	1 cut(s)	1508
XapI	RAATTY	3 cut(s)	259, 1322, 1447
XcmI	CCANNNNNNNNNTGG	1 cut(s)	127
XhoI	CTCGAG	2 cut(s)	10, 1347
XmnI	GAANNNNTTC	1 cut(s)	872
XspI	CTAG	1 cut(s)	144
ZrmI	AGTACT	1 cut(s)	1287
Zsp2I	ATGCAT	1 cut(s)	856

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.