Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb5

Orthogroup ID

OG0005394

Physical Location & Seq

Genomic Coordinates Forward (+)

1877748 .. 1884208

Gene Structure 6461 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_5g03130.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1485 bp

ATGTCTTCAGCTACAGTACTTCCCAGACGAATGGCCGCCTCCCTCGCCAACACTCTCTCCTTCACGGCCGGCCTTCCTCTGCGCCGTCATCCTCGCACCTCCGCCTCCCTCGGACTCTCCACCTTCCGCCGAAGCTACGTCGTTTCTTCCTCAGCTTTCGCCAACGAAAACCGCGAGTTTGTGATTGTCGGCGGCGGCAATGCGGCTGGTTACGCAGCTCGGACTTTCGTCGAGAATGGAATGGCCGATGGGCGCCTTGCTATTGTTTCCAAGGAGGCTCATGCGCCTTATGAGCGTCCAGCTCTGACTAAAGCGTACTTGTTCCCATTAGATAAGAAGCCGGCGCGCTTGCCTGGGTTTCATACATGTGTTGGATCTGGCGGGGAGAGGCAGACACCTGACTGGTATAAAGAAAAAGGGATAGAGATGTTCTATGAAGATCCGGTTACAAATGTTGATATTGAAAAGCAAACCCTGACTACAGATTCAGGGAAACTGCTCAAGTATGGATCACTTATAGTTGCTACTGGATGCACAGCCTCAAGATTGCCAGAGAAAATAGGAGGAAACCTACCTGGTGTTCATTATATCCGGGATGTTGCTGATGCTGATGCACTTATATCATCATTGGAGAAAGCACAGAAGGTGGTCATCGTCGGTGGTGGATATATTGGTATGGAGGTTGCTGCAGCAGCTACTGGTTGGAAACTTGATACAACAATCATATTTCCAGAGAGCCATCTTATGCCAAGACTGTTTACTCCTTCACTTGCCGGGAGATATGAAAAATTCTACAAAGAGAATGGTGTTAAGTTCTTAAAGGGTACCTCACTAAAGAATATAGAAGCTGGTTCCAATGGACGGGTATCTTGTGTTAAACTTGAAGATGGATCCTATATAGAAGCAGATGTGGTAATTGTTGGTATAGGAGCAAAACCTGCTGTCGGCCCTTTTGAAAAAGCAGGTTTGGATTCCAATGTTGGTGGTATACAGGTTGACGGTCTGTTCCGGACAAGTGTACCTGGAATCTTTGCAGTTGGAGATGTTGCAGCTTTCCCATTGAAGATGTACAATCGTATAGCACGGGTGGAACATGTAGATCATGCTCGTCGATCTGCACAGCATTGCATTAAAGCCTTACTGACTGCACAAACTCACACATATGACTATCTTCCATCGTTCTACTCGAGGGTATTTGAGTATGAAGGAAGCCCGAGGAAAATATGGTGGCAATTTTATGGGGACAATGTTGGAGAGACAGTTGAAGTTGGGAATTTTGATCCTAAGATTGCAACTTTCTGGATAGATTCGGGTAAACTGAAAGGTGTTCTTGTTGAAAGCGGAAGCCCTGAGGAATTTCAACTGCTTCCAAAACTGGCAAGGAGCCAGCCTCTTGTTGATATAGCCAAACTCCAGAATGCGTCTTCAGTTGAGGAGGCACTAGCCATTGTCGGGTCATCATTACAGGTTGGAGCTGCAGTATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0003674 GO:0005488 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005739 GO:0006950 GO:0008144 GO:0008150 GO:0009266 GO:0009409 GO:0009507 GO:0009526 GO:0009532 GO:0009536 GO:0009570 GO:0009628 GO:0010035 GO:0010038 GO:0010319 GO:0017076 GO:0030554 GO:0031967 GO:0031975 GO:0032553 GO:0032555 GO:0032559 GO:0035639 GO:0036094 GO:0042221 GO:0043167 GO:0043168 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0046686 GO:0050896 GO:0097159 GO:0097367 GO:1901265 GO:1901363

KEGG Pathways

Metabolic & Signaling

ko00053 ko01100 map00053 map01100

Pfam Domains

Protein Families

Pyr_redox_2

Protein Analysis

495

Amino Acids

53.35

Weight (kDa)

8.62

Isoelectric Point (pI)

38.27

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Pyr_redox_2	PF07992	60 - 372	1.3e-57	Pyridine nucleotide-disulphide oxidoreductase
Pyr_redox_3	PF13738	138 - 347	9.3e-06	Pyridine nucleotide-disulphide oxidoreductase
Pyr_redox	PF00070	215 - 297	8.7e-17	Pyridine nucleotide-disulphide oxidoreductase
MDHAR3-like_C	PF21791	391 - 472	3.1e-17	Monodehydroascorbate reductase 3-like, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005394)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G63940 AT1G63940 AT1G63940 AT1G63940
fragaria_vesca	FvH4_5g03130 FvH4_5g03130 FvH4_5g03130
malus_domestica	MD14G1111300.v1.1
prunus_persica	Prupe.5G106000_v2.0.a1 Prupe.5G106000_v2.0.a1 Prupe.5G106000_v2.0.a1 Prupe.5G106000_v2.0.a1 Prupe.5G106000_v2.0.a1
pyrus_communis	pycom14g10610
rosa_chinensis	RchiOBHm_Chr7g0196651
rosa_laevigata	RLG00000004000
rosa_multiflora	Rmu_sc0006080.1_g000012
rosa_roxburghii	Rroxscaffold_3G00231660 Rroxscaffold_3G00259130 Rroxscaffold_4G00330440 Rroxscaffold_5G00367630 Rroxscaffold_5G00367640 Rroxscaffold_6G00417800
rosa_rugosa	Rorug07G0035700
rosa_samantha	Rh7AG159400 Rh7BG161400 Rh7CG167800 Rh7DG160700
rosa_wichuraiana	Rw7G013950

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	946, 953
Acc65I	GGTACC	1 cut(s)	824
AccB1I	GGYRCC	2 cut(s)	252, 824
AccI	GTMKAC	1 cut(s)	988
AccII	CGCG	2 cut(s)	174, 346
AccIII	TCCGGA	1 cut(s)	1008
AciI	CCGC	9 cut(s)	36, 102, 127, 172, 192, 195, 203, 381, 1341
AclWI	GGATC	6 cut(s)	382, 434, 517, 885, 898, 1274
AcoI	YGGCCR	3 cut(s)	33, 66, 243
AcsI	RAATTY	3 cut(s)	788, 1273, 1355
AcuI	CTGAAG	1 cut(s)	1410
AcyI	GRCGYC	1 cut(s)	253
AfaI	GTAC	5 cut(s)	18, 317, 826, 1020, 1070
AfiI	CCNNNNNNNGG	3 cut(s)	861, 944, 1452
AflIII	ACRYGT	2 cut(s)	365, 1093
AgsI	TTSAA	7 cut(s)	464, 884, 956, 1063, 1265, 1337, 1361
AjnI	CCWGG	3 cut(s)	352, 574, 1021
AluBI	AGCT	9 cut(s)	11, 135, 155, 218, 302, 695, 848, 1052, 1475
AluI	AGCT	9 cut(s)	11, 135, 155, 218, 302, 695, 848, 1052, 1475
Alw26I	GTCTC	1 cut(s)	1250
AlwI	GGATC	6 cut(s)	382, 434, 517, 885, 898, 1274
AlwNI	CAGNNNCTG	1 cut(s)	698
Ama87I	CYCGRG	2 cut(s)	1186, 1213
Aor13HI	TCCGGA	1 cut(s)	1008
AoxI	GGCC	5 cut(s)	33, 66, 70, 243, 946
ApeKI	GCWGC	6 cut(s)	215, 686, 689, 692, 1049, 1475
ApoI	RAATTY	3 cut(s)	788, 1273, 1355
Asp718I	GGTACC	1 cut(s)	824
AspLEI	GCGC	5 cut(s)	84, 255, 286, 346, 348
AspS9I	GGNCC	1 cut(s)	947
AsuC2I	CCSGG	2 cut(s)	593, 775
AvaI	CYCGRG	2 cut(s)	1186, 1213
AxyI	CCTNAGG	1 cut(s)	1350
BaeI	ACNNNNGTAYC	2 cut(s)	1002, 1035
BamHI	GGATCC	1 cut(s)	890
BanI	GGYRCC	2 cut(s)	252, 824
BbsI	GAAGAC	1 cut(s)	1416
BbvCI	CCTCAGC	1 cut(s)	151
BbvI	GCAGC	6 cut(s)	227, 673, 701, 704, 1061, 1462
BccI	CCATC	4 cut(s)	242, 747, 881, 1183
BceAI	ACGGC	2 cut(s)	69, 81
BciT130I	CCWGG	3 cut(s)	354, 576, 1023
BcnI	CCSGG	2 cut(s)	593, 775
BcoDI	GTCTC	1 cut(s)	1250
BfaI	CTAG	1 cut(s)	1442
BfmI	CTRYAG	4 cut(s)	12, 480, 687, 1476
BfoI	RGCGCY	1 cut(s)	256
BfuAI	ACCTGC	2 cut(s)	946, 953
BmcAI	AGTACT	1 cut(s)	18
Bme1390I	CCNGG	5 cut(s)	354, 576, 593, 775, 1023
BmeT110I	CYCGRG	2 cut(s)	1186, 1213
BmgT120I	GGNCC	1 cut(s)	947
BmiI	GGNNCC	5 cut(s)	254, 826, 853, 892, 1385
BmrFI	CCNGG	5 cut(s)	354, 576, 593, 775, 1023
BmsI	GCATC	3 cut(s)	521, 595, 601
BoxI	GACNNNNGTC	1 cut(s)	227
BpiI	GAAGAC	1 cut(s)	1416
BplI	GAGNNNNNCTC	2 cut(s)	1375, 1407
BpmI	CTGGAG	1 cut(s)	1397
Bpu10I	CCTNAGC	1 cut(s)	151
BpuEI	CTTGAG	2 cut(s)	485, 526
BpuMI	CCSGG	2 cut(s)	593, 775
BsaHI	GRCGYC	1 cut(s)	253
BsaJI	CCNNGG	4 cut(s)	109, 270, 353, 1214
BsaWI	WCCGGW	2 cut(s)	442, 1008
BsaXI	ACNNNNNCTCC	5 cut(s)	41, 71, 1245, 1275, 1464
Bsc4I	CCNNNNNNNGG	3 cut(s)	861, 944, 1452
Bse118I	RCCGGY	2 cut(s)	68, 340
Bse1I	ACTGG	4 cut(s)	407, 532, 703, 1380
Bse21I	CCTNAGG	1 cut(s)	1350
Bse3DI	GCAATG	2 cut(s)	205, 1123
BseAI	TCCGGA	1 cut(s)	1008
BseBI	CCWGG	3 cut(s)	354, 576, 1023
BseDI	CCNNGG	4 cut(s)	109, 270, 353, 1214
BseGI	GGATG	3 cut(s)	88, 536, 601
BseLI	CCNNNNNNNGG	3 cut(s)	861, 944, 1452
BseMI	GCAATG	2 cut(s)	205, 1123
BseMII	CTCAG	2 cut(s)	165, 1341
BseNI	ACTGG	4 cut(s)	407, 532, 703, 1380
BsePI	GCGCGC	1 cut(s)	344
BseRI	GAGGAG	1 cut(s)	1448
BseX3I	CGGCCG	1 cut(s)	66
BseXI	GCAGC	6 cut(s)	227, 673, 701, 704, 1061, 1462
BsgI	GTGCAG	2 cut(s)	1101, 1131
Bsh1236I	CGCG	2 cut(s)	174, 346
Bsh1285I	CGRYCG	1 cut(s)	69
BshFI	GGCC	5 cut(s)	35, 68, 72, 245, 948
BshNI	GGYRCC	2 cut(s)	252, 824
BsiEI	CGRYCG	1 cut(s)	69
BsiHKCI	CYCGRG	2 cut(s)	1186, 1213
BsiSI	CCGG	6 cut(s)	69, 341, 443, 592, 774, 1009
BslFI	GGGAC	1 cut(s)	1256
BslI	CCNNNNNNNGG	3 cut(s)	861, 944, 1452
BsmAI	GTCTC	1 cut(s)	1250
BsmFI	GGGAC	1 cut(s)	1256
BsmI	GAATGC	1 cut(s)	1423
BsnI	GGCC	5 cut(s)	35, 68, 72, 245, 948
BsoBI	CYCGRG	2 cut(s)	1186, 1213
Bsp13I	TCCGGA	1 cut(s)	1008
Bsp1407I	TGTACA	1 cut(s)	1068
Bsp143I	GATC	7 cut(s)	374, 439, 509, 890, 1099, 1112, 1279
BspACI	CCGC	9 cut(s)	36, 102, 127, 172, 192, 195, 203, 381, 1341
BspANI	GGCC	5 cut(s)	35, 68, 72, 245, 948
BspCNI	CTCAG	2 cut(s)	164, 1342
BspEI	TCCGGA	1 cut(s)	1008
BspFNI	CGCG	2 cut(s)	174, 346
BspLI	GGNNCC	5 cut(s)	254, 826, 853, 892, 1385
BspMAI	CTGCAG	2 cut(s)	691, 1480
BspMI	ACCTGC	2 cut(s)	946, 953
BspPI	GGATC	6 cut(s)	382, 434, 517, 885, 898, 1274
BspT107I	GGYRCC	2 cut(s)	252, 824
BsrDI	GCAATG	2 cut(s)	205, 1123
BsrFI	RCCGGY	2 cut(s)	68, 340
BsrGI	TGTACA	1 cut(s)	1068
BsrI	ACTGG	4 cut(s)	407, 532, 703, 1380
BssAI	RCCGGY	2 cut(s)	68, 340
BssECI	CCNNGG	4 cut(s)	109, 270, 353, 1214
BssHII	GCGCGC	1 cut(s)	344
BssMI	GATC	7 cut(s)	374, 439, 509, 890, 1099, 1112, 1279
BssNAI	GTATAC	1 cut(s)	989
BssNI	GRCGYC	1 cut(s)	253
BssT1I	CCWWGG	1 cut(s)	270
Bst1107I	GTATAC	1 cut(s)	989
Bst2UI	CCWGG	3 cut(s)	354, 576, 1023
Bst4CI	ACNGT	4 cut(s)	16, 756, 1001, 1261
BstACI	GRCGYC	1 cut(s)	253
BstAPI	GCANNNNNTGC	1 cut(s)	938
BstAUI	TGTACA	1 cut(s)	1068
BstC8I	GCNNGC	5 cut(s)	70, 342, 346, 350, 1388
BstDEI	CTNAG	3 cut(s)	151, 1284, 1350
BstF5I	GGATG	3 cut(s)	88, 536, 601
BstFNI	CGCG	2 cut(s)	174, 346
BstH2I	RGCGCY	1 cut(s)	256
BstHHI	GCGC	5 cut(s)	84, 255, 286, 346, 348
BstKTI	GATC	7 cut(s)	377, 442, 512, 893, 1102, 1115, 1282
BstMAI	GTCTC	1 cut(s)	1250
BstMBI	GATC	7 cut(s)	374, 439, 509, 890, 1099, 1112, 1279
BstMCI	CGRYCG	1 cut(s)	69
BstMWI	GCNNNNNNNGC	5 cut(s)	44, 212, 292, 692, 938
BstNI	CCWGG	3 cut(s)	354, 576, 1023
BstNSI	RCATGY	2 cut(s)	369, 1097
BstPAI	GACNNNNGTC	1 cut(s)	227
BstSCI	CCNGG	5 cut(s)	352, 574, 591, 773, 1021
BstSFI	CTRYAG	4 cut(s)	12, 480, 687, 1476
BstUI	CGCG	2 cut(s)	174, 346
BstV1I	GCAGC	6 cut(s)	227, 673, 701, 704, 1061, 1462
BstV2I	GAAGAC	1 cut(s)	1416
BstX2I	RGATCY	3 cut(s)	374, 439, 890
BstXI	CCANNNNNNTGG	1 cut(s)	31
BstYI	RGATCY	3 cut(s)	374, 439, 890
BstZ17I	GTATAC	1 cut(s)	989
BstZI	CGGCCG	1 cut(s)	66
Bsu36I	CCTNAGG	1 cut(s)	1350
BsuRI	GGCC	5 cut(s)	35, 68, 72, 245, 948
BtsCI	GGATG	3 cut(s)	88, 536, 601
BveI	ACCTGC	2 cut(s)	946, 953
Cac8I	GCNNGC	5 cut(s)	70, 342, 346, 350, 1388
CaiI	CAGNNNCTG	1 cut(s)	698
CfoI	GCGC	5 cut(s)	84, 255, 286, 346, 348
Cfr10I	RCCGGY	2 cut(s)	68, 340
Cfr13I	GGNCC	1 cut(s)	947
CseI	GACGC	2 cut(s)	284, 1410
CsiI	ACCWGGT	1 cut(s)	574
Csp6I	GTAC	5 cut(s)	17, 316, 825, 1019, 1069
CspCI	CAANNNNNGTGG	2 cut(s)	964, 999
CviAII	CATG	4 cut(s)	281, 366, 1094, 1103
CviQI	GTAC	5 cut(s)	17, 316, 825, 1019, 1069
DdeI	CTNAG	3 cut(s)	151, 1284, 1350
DinI	GGCGCC	1 cut(s)	254
DpnI	GATC	7 cut(s)	376, 441, 511, 892, 1101, 1114, 1281
DpnII	GATC	7 cut(s)	374, 439, 509, 890, 1099, 1112, 1279
EaeI	YGGCCR	3 cut(s)	33, 66, 243
EagI	CGGCCG	1 cut(s)	66
EciI	GGCGGA	2 cut(s)	91, 116
EclXI	CGGCCG	1 cut(s)	66
Eco130I	CCWWGG	1 cut(s)	270
Eco52I	CGGCCG	1 cut(s)	66
Eco57I	CTGAAG	1 cut(s)	1410
Eco81I	CCTNAGG	1 cut(s)	1350
Eco88I	CYCGRG	2 cut(s)	1186, 1213
EcoRII	CCWGG	3 cut(s)	352, 574, 1021
EcoT14I	CCWWGG	1 cut(s)	270
EgeI	GGCGCC	1 cut(s)	254
EheI	GGCGCC	1 cut(s)	254
ErhI	CCWWGG	1 cut(s)	270
FaeI	CATG	4 cut(s)	284, 369, 1097, 1106
FalI	AAGNNNNNCTT	2 cut(s)	1314, 1346
FaqI	GGGAC	1 cut(s)	1256
FatI	CATG	4 cut(s)	280, 365, 1093, 1102
FauI	CCCGC	1 cut(s)	374
FauNDI	CATATG	1 cut(s)	1162
FblI	GTMKAC	1 cut(s)	988
FokI	GGATG	3 cut(s)	75, 543, 608
FseI	GGCCGGCC	1 cut(s)	72
FspBI	CTAG	1 cut(s)	1442
GlaI	GCGC	5 cut(s)	83, 254, 285, 345, 347
GsuI	CTGGAG	1 cut(s)	1397
HaeII	RGCGCY	1 cut(s)	256
HaeIII	GGCC	5 cut(s)	35, 68, 72, 245, 948
HapII	CCGG	6 cut(s)	69, 341, 443, 592, 774, 1009
HgaI	GACGC	2 cut(s)	284, 1410
HhaI	GCGC	5 cut(s)	84, 255, 286, 346, 348
Hin1I	GRCGYC	1 cut(s)	253
Hin1II	CATG	4 cut(s)	284, 369, 1097, 1106
Hin6I	GCGC	5 cut(s)	82, 253, 284, 344, 346
HinP1I	GCGC	5 cut(s)	82, 253, 284, 344, 346
HincII	GTYRAC	1 cut(s)	997
HindII	GTYRAC	1 cut(s)	997
HinfI	GANTC	5 cut(s)	114, 485, 971, 1026, 1307
HpaII	CCGG	6 cut(s)	69, 341, 443, 592, 774, 1009
Hpy166II	GTNNAC	5 cut(s)	759, 989, 997, 1019, 1316
Hpy188I	TCNGA	3 cut(s)	113, 222, 306
Hpy188III	TCNNGA	6 cut(s)	232, 543, 731, 1009, 1300, 1414
Hpy8I	GTNNAC	5 cut(s)	759, 989, 997, 1019, 1316
Hpy99I	CGWCG	4 cut(s)	143, 233, 659, 1113
HpyAV	CCTTC	6 cut(s)	70, 83, 133, 637, 774, 1199
HpyCH4III	ACNGT	4 cut(s)	16, 756, 1001, 1261
HpyCH4IV	ACGT	1 cut(s)	138
HpyF10VI	GCNNNNNNNGC	5 cut(s)	44, 212, 292, 692, 938
HpyF3I	CTNAG	3 cut(s)	151, 1284, 1350
HpySE526I	ACGT	1 cut(s)	138
Hsp92I	GRCGYC	1 cut(s)	253
Hsp92II	CATG	4 cut(s)	284, 369, 1097, 1106
HspAI	GCGC	5 cut(s)	82, 253, 284, 344, 346
KasI	GGCGCC	1 cut(s)	252
Kpn2I	TCCGGA	1 cut(s)	1008
KpnI	GGTACC	1 cut(s)	828
KroI	GCCGGC	2 cut(s)	68, 340
KroNI	GCCGGC	2 cut(s)	70, 342
Kzo9I	GATC	7 cut(s)	374, 439, 509, 890, 1099, 1112, 1279
LmnI	GCTCC	3 cut(s)	929, 1383, 1472
Lsp1109I	GCAGC	6 cut(s)	227, 673, 701, 704, 1061, 1462
LweI	GCATC	3 cut(s)	521, 595, 601
MabI	ACCWGGT	1 cut(s)	574
MaeI	CTAG	1 cut(s)	1442
MaeII	ACGT	1 cut(s)	138
MaeIII	GTNAC	2 cut(s)	209, 445
MalI	GATC	7 cut(s)	376, 441, 511, 892, 1101, 1114, 1281
MboI	GATC	7 cut(s)	374, 439, 509, 890, 1099, 1112, 1279
MboII	GAAGA	6 cut(s)	138, 449, 896, 1075, 1163, 1416
MflI	RGATCY	3 cut(s)	374, 439, 890
MluCI	AATT	5 cut(s)	788, 915, 1232, 1273, 1355
Mly113I	GGCGCC	1 cut(s)	253
MlyI	GAGTC	1 cut(s)	108
MmeI	TCCRAC	5 cut(s)	352, 683, 1018, 1231, 1450
MroI	TCCGGA	1 cut(s)	1008
MroNI	GCCGGC	2 cut(s)	68, 340
MseI	TTAA	4 cut(s)	810, 818, 876, 1131
MslI	CAYNNNNRTG	2 cut(s)	366, 1161
MspI	CCGG	6 cut(s)	69, 341, 443, 592, 774, 1009
MspR9I	CCNGG	5 cut(s)	354, 576, 593, 775, 1023
Mva1269I	GAATGC	1 cut(s)	1423
MvaI	CCWGG	3 cut(s)	354, 576, 1023
MvnI	CGCG	2 cut(s)	174, 346
MwoI	GCNNNNNNNGC	5 cut(s)	44, 212, 292, 692, 938
NaeI	GCCGGC	2 cut(s)	70, 342
NarI	GGCGCC	1 cut(s)	253
NciI	CCSGG	2 cut(s)	593, 775
NdeI	CATATG	1 cut(s)	1162
NdeII	GATC	7 cut(s)	374, 439, 509, 890, 1099, 1112, 1279
NgoMIV	GCCGGC	2 cut(s)	68, 340
NlaIII	CATG	4 cut(s)	284, 369, 1097, 1106
NlaIV	GGNNCC	5 cut(s)	254, 826, 853, 892, 1385
NspI	RCATGY	2 cut(s)	369, 1097
PaeR7I	CTCGAG	1 cut(s)	1186
PauI	GCGCGC	1 cut(s)	344
PciI	ACATGT	2 cut(s)	365, 1093
PcsI	WCGNNNNNNNCGW	2 cut(s)	171, 1184
PctI	GAATGC	1 cut(s)	1423
PdiI	GCCGGC	2 cut(s)	70, 342
PfeI	GAWTC	4 cut(s)	485, 971, 1026, 1307
PfoI	TCCNGGA	1 cut(s)	591
PleI	GAGTC	1 cut(s)	108
PluTI	GGCGCC	1 cut(s)	256
PpsI	GAGTC	1 cut(s)	108
PscI	ACATGT	2 cut(s)	365, 1093
PshAI	GACNNNNGTC	1 cut(s)	227
Psp6I	CCWGG	3 cut(s)	352, 574, 1021
PspGI	CCWGG	3 cut(s)	352, 574, 1021
PspN4I	GGNNCC	5 cut(s)	254, 826, 853, 892, 1385
PspPI	GGNCC	1 cut(s)	947
PspXI	VCTCGAGB	1 cut(s)	1186
PstI	CTGCAG	2 cut(s)	691, 1480
PstNI	CAGNNNCTG	1 cut(s)	698
PsuI	RGATCY	3 cut(s)	374, 439, 890
PteI	GCGCGC	1 cut(s)	344
RigI	GGCCGGCC	1 cut(s)	72
RsaI	GTAC	5 cut(s)	18, 317, 826, 1020, 1070
RsaNI	GTAC	5 cut(s)	17, 316, 825, 1019, 1069
RseI	CAYNNNNRTG	2 cut(s)	366, 1161
SaqAI	TTAA	4 cut(s)	810, 818, 876, 1131
Sau3AI	GATC	7 cut(s)	374, 439, 509, 890, 1099, 1112, 1279
Sau96I	GGNCC	1 cut(s)	947
ScaI	AGTACT	1 cut(s)	18
SchI	GAGTC	1 cut(s)	108
ScrFI	CCNGG	5 cut(s)	354, 576, 593, 775, 1023
SexAI	ACCWGGT	1 cut(s)	574
SfaNI	GCATC	3 cut(s)	521, 595, 601
SfcI	CTRYAG	4 cut(s)	12, 480, 687, 1476
SfoI	GGCGCC	1 cut(s)	254
Sfr274I	CTCGAG	1 cut(s)	1186
SlaI	CTCGAG	1 cut(s)	1186
SmiMI	CAYNNNNRTG	2 cut(s)	366, 1161
SmlI	CTYRAG	3 cut(s)	500, 541, 1186
SmoI	CTYRAG	3 cut(s)	500, 541, 1186
Sse9I	AATT	5 cut(s)	788, 915, 1232, 1273, 1355
SsiI	CCGC	9 cut(s)	36, 102, 127, 172, 192, 195, 203, 381, 1341
SspDI	GGCGCC	1 cut(s)	252
SspMI	CTAG	1 cut(s)	1442
StyD4I	CCNGG	5 cut(s)	352, 574, 591, 773, 1021
StyI	CCWWGG	1 cut(s)	270
TaaI	ACNGT	4 cut(s)	16, 756, 1001, 1261
TaiI	ACGT	1 cut(s)	141
TaqI	TCGA	3 cut(s)	231, 1111, 1187
TasI	AATT	5 cut(s)	788, 915, 1232, 1273, 1355
TatI	WGTACW	2 cut(s)	16, 1068
TauI	GCSGC	4 cut(s)	38, 195, 198, 206
TfiI	GAWTC	4 cut(s)	485, 971, 1026, 1307
Tru1I	TTAA	4 cut(s)	810, 818, 876, 1131
Tru9I	TTAA	4 cut(s)	810, 818, 876, 1131
TseI	GCWGC	6 cut(s)	215, 686, 689, 692, 1049, 1475
TspDTI	ATGAA	5 cut(s)	350, 450, 572, 798, 1218
XapI	RAATTY	3 cut(s)	788, 1273, 1355
XceI	RCATGY	2 cut(s)	369, 1097
XhoI	CTCGAG	1 cut(s)	1186
XmiI	GTMKAC	1 cut(s)	988
XspI	CTAG	1 cut(s)	1442
ZrmI	AGTACT	1 cut(s)	18

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.