Rroxscaffold_4G00330440

Monodehydroascorbate reductase

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
Physical Location & Seq
Forward (+)
64154849 .. 64155534
686 bp
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UTR
Exon/CDS
Intron
Rroxscaffold_4G00330440.1

Sequence Viewer

Length: 363 bp
ATGGCCTCCACCATCGCCAACTCTCTCTCCTTCAAGCTCGGCGTTCCTCTCCGCCCTCATCCTCGCCCCCACTCACACCTCCGCTTCACTCGGATTCACAACCTTTCCGCCGAAGCTACGTTGTTTCGTCCTCTGCTTTCGCCAATCAAAATCGCGAAGGCTTATGCACCTTATGAGCGTCCGGCTACGACTAAAGCGTATTTGTTCCCATTAGAAAAGAAGCCGGCTCGCTTACCGGGTTTCATACTTGTGTTGGATCCGGTGGGGAGCGGCAAACACCGACCGAAAGCACAGAAGGTGGTCATTGTCGGTGGTGGTTATATTGGTATGGAGGTTGCAGCAGCTATGCGGTTGGAAACTTGA

Protein Analysis

120

Amino Acids

13.16

Weight (kDa)

10.65

Isoelectric Point (pI)

35.34

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 270
AccII CGCG 1 cut(s) 155
AciI CCGC 5 cut(s) 52, 82, 108, 270, 349
AclWI GGATC 2 cut(s) 251, 264
AgsI TTSAA 1 cut(s) 34
AluBI AGCT 3 cut(s) 37, 116, 344
AluI AGCT 3 cut(s) 37, 116, 344
AlwI GGATC 2 cut(s) 251, 264
AoxI GGCC 1 cut(s) 3
ApeKI GCWGC 2 cut(s) 338, 341
AsuC2I CCSGG 1 cut(s) 237
BamHI GGATCC 1 cut(s) 256
BbvI GCAGC 2 cut(s) 350, 353
BccI CCATC 1 cut(s) 20
BcnI CCSGG 1 cut(s) 237
BisI GCNGC 3 cut(s) 271, 339, 342
BlsI GCNGC 3 cut(s) 272, 340, 343
Bme1390I CCNGG 1 cut(s) 237
BmiI GGNNCC 1 cut(s) 258
BmrFI CCNGG 1 cut(s) 237
BpuMI CCSGG 1 cut(s) 237
BsaWI WCCGGW 1 cut(s) 259
BsaXI ACNNNNNCTCC 2 cut(s) 11, 41
Bse118I RCCGGY 1 cut(s) 223
BseGI GGATG 1 cut(s) 58
BseXI GCAGC 2 cut(s) 350, 353
Bsh1236I CGCG 1 cut(s) 155
Bsh1285I CGRYCG 1 cut(s) 284
BshFI GGCC 1 cut(s) 5
BsiEI CGRYCG 1 cut(s) 284
BsiSI CCGG 4 cut(s) 182, 224, 236, 260
BsnI GGCC 1 cut(s) 5
Bsp143I GATC 1 cut(s) 256
Bsp68I TCGCGA 1 cut(s) 155
BspACI CCGC 5 cut(s) 52, 82, 108, 270, 349
BspANI GGCC 1 cut(s) 5
BspFNI CGCG 1 cut(s) 155
BspLI GGNNCC 1 cut(s) 258
BspPI GGATC 2 cut(s) 251, 264
BsrBI CCGCTC 1 cut(s) 270
BsrFI RCCGGY 1 cut(s) 223
BssAI RCCGGY 1 cut(s) 223
BssMI GATC 1 cut(s) 256
BstC8I GCNNGC 2 cut(s) 225, 229
BstF5I GGATG 1 cut(s) 58
BstFNI CGCG 1 cut(s) 155
BstKTI GATC 1 cut(s) 259
BstMBI GATC 1 cut(s) 256
BstMCI CGRYCG 1 cut(s) 284
BstSCI CCNGG 1 cut(s) 235
BstUI CGCG 1 cut(s) 155
BstV1I GCAGC 2 cut(s) 350, 353
BstX2I RGATCY 1 cut(s) 256
BstYI RGATCY 1 cut(s) 256
BsuRI GGCC 1 cut(s) 5
BtsCI GGATG 1 cut(s) 58
BtuMI TCGCGA 1 cut(s) 155
Cac8I GCNNGC 2 cut(s) 225, 229
Cfr10I RCCGGY 1 cut(s) 223
CseI GACGC 1 cut(s) 167
CviJI RGCY 8 cut(s) 5, 37, 116, 161, 185, 223, 227, 344
CviKI_1 RGCY 8 cut(s) 5, 37, 116, 161, 185, 223, 227, 344
DpnI GATC 1 cut(s) 258
DpnII GATC 1 cut(s) 256
EciI GGCGGA 2 cut(s) 41, 97
FaiI YATR 6 cut(s) 165, 174, 245, 321, 329, 347
Fnu4HI GCNGC 3 cut(s) 271, 339, 342
FokI GGATG 1 cut(s) 45
Fsp4HI GCNGC 3 cut(s) 271, 339, 342
GluI GCNGC 3 cut(s) 271, 339, 342
HaeIII GGCC 1 cut(s) 5
HapII CCGG 4 cut(s) 182, 224, 236, 260
HgaI GACGC 1 cut(s) 167
HinfI GANTC 1 cut(s) 94
HpaII CCGG 4 cut(s) 182, 224, 236, 260
Hpy188I TCNGA 1 cut(s) 93
Hpy188III TCNNGA 1 cut(s) 154
HpyAV CCTTC 3 cut(s) 40, 151, 289
HpyCH4IV ACGT 1 cut(s) 119
HpyCH4V TGCA 2 cut(s) 167, 338
HpySE526I ACGT 1 cut(s) 119
KroI GCCGGC 1 cut(s) 223
KroNI GCCGGC 1 cut(s) 225
Kzo9I GATC 1 cut(s) 256
LmnI GCTCC 1 cut(s) 267
LpnPI CCDG 4 cut(s) 195, 237, 249, 273
Lsp1109I GCAGC 2 cut(s) 350, 353
MaeII ACGT 1 cut(s) 119
MalI GATC 1 cut(s) 258
MbiI CCGCTC 1 cut(s) 270
MboI GATC 1 cut(s) 256
MflI RGATCY 1 cut(s) 256
MmeI TCCRAC 2 cut(s) 234, 333
MnlI CCTC 7 cut(s) 16, 57, 66, 72, 89, 141, 325
MroNI GCCGGC 1 cut(s) 223
MslI CAYNNNNRTG 1 cut(s) 248
MspI CCGG 4 cut(s) 182, 224, 236, 260
MspR9I CCNGG 1 cut(s) 237
MvnI CGCG 1 cut(s) 155
NaeI GCCGGC 1 cut(s) 225
NciI CCSGG 1 cut(s) 237
NdeII GATC 1 cut(s) 256
NgoMIV GCCGGC 1 cut(s) 223
NlaIV GGNNCC 1 cut(s) 258
NmeAIII GCCGAG 1 cut(s) 18
NruI TCGCGA 1 cut(s) 155
PcsI WCGNNNNNNNCGW 1 cut(s) 194
PdiI GCCGGC 1 cut(s) 225
PfeI GAWTC 1 cut(s) 94
PkrI GCNGC 3 cut(s) 272, 340, 343
PspN4I GGNNCC 1 cut(s) 258
PsuI RGATCY 1 cut(s) 256
RruI TCGCGA 1 cut(s) 155
RseI CAYNNNNRTG 1 cut(s) 248
SatI GCNGC 3 cut(s) 271, 339, 342
Sau3AI GATC 1 cut(s) 256
ScrFI CCNGG 1 cut(s) 237
SetI ASST 9 cut(s) 39, 81, 105, 118, 122, 172, 300, 336, 346
SmiMI CAYNNNNRTG 1 cut(s) 248
SsiI CCGC 5 cut(s) 52, 82, 108, 270, 349
StyD4I CCNGG 1 cut(s) 235
TaiI ACGT 1 cut(s) 122
TaqII GACCGA 1 cut(s) 298
TauI GCSGC 1 cut(s) 273
TfiI GAWTC 1 cut(s) 94
TseI GCWGC 2 cut(s) 338, 341
TspDTI ATGAA 1 cut(s) 232
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.