Rorug07G0035700

late blight resistance protein homolog R1B-19

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000007
OG0000998
Physical Location & Seq
Forward (+)
2520853 .. 2526405
5553 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug07G0035700.1

Sequence Viewer

Length: 2322 bp
ATGGCGGAATTTGTTGGTAGCCGAGCTAGTTTCTGGGTTCAGTCCAATGCTTTGCTCAGAAAGAACTTAACCTTTCAGAAACGAAGAATGTGCGCCAACATTGCGCTCATTTTAATACCAGCTTTCTTCTGCATATTCTTCGCCGTTATCCAATTCCTGATAGATAACAAGATAGTCGCAATTGCCCTAAGGGAATGCGAGAAGAGGCCAAGGCTATTGGGCCCAGAGACTAAGATTGCTCAACAGTGTGCAATCCCTTCTCCTCCGGAATGGCCTGCCTTGGTTAGACTACCAGGAGCCCCTACTCGTTCTCTCCGAAGCGATTACCCTGATCCCGAGCCCGATGAGGAGTGCTGGTTGAAAGGCACTTGCCCTGTGACGATACTTATCACCGGGAATAACCAGACATTTGGCCAAGAATTGGGTTCAAACCTGTTGCCGGCCGATGATTTGCCGAAAAATTCCTCCGGCAACCTTACGGATTGGACCAAATTTGTCGTGGGTTCACACTACGATGTATCACAATTTTATATGGATCCTGCTTTCGAGTCAGATCGTAGGACCTTTTATCTGCAGAATCAATGCAAGGATGATGAAGATCAGGTCATCAGGGCTCCAGTTCAAGTATTAGCAAATAACCGGCCATTAAAAACAGAGGTTGAATGTCTCCGATGCTTTATATTGTGGCGTAGTAGTTATTCTGAAATAAATGATGAACTGTTCAAAGGTCAGAGGAAGGGGAATAAACATAGCGAAGCTAATGAAACACTTTCAGCCTATGATATCTCAAACTCAGATGAGAATACTTACAATGTGACCATATGGTACGATTCAAACGATTCAAACCAGGGCGACGACAATCAGAATTTGAAACGGATTCCACGTTTGGTCAATATGGCATCAAACGCCTACCTTCGGTTAGTGAAAGGAAATGAAACAAAAATTATGTTCGACTTTGTTAAGGAAATGCCTAAGGGTTTTACCCTAAACCTTCCTGATTTTACGGCACTGATAGGTCCATTGTTGTTTTCATGGGTTGTTTTACAGCTGTTCCCGGTTGTGTTGGCGTCTCTGGTTTATGAGAAACAAGAAAGACTGAGAGTGATGATGAAAATGCATGGCCTCGGTGATGGGCCTTACTGGATGATTCAATATTCTTATTTTCTTGCAATATCTGTACTCTACATTATATGTTTTGTTGGATTTGGTTCACTCGTAGGCTTACATTTCTTCTACGAACATGACTACTCCCTCCAATTTATATTTTACTTCTTCTTTGTAAACTTGCAAATAGCGCTGGCTTTTCTTTTGTCGTCAATGTTCTCGCACACTAGGGCTGCTACAGTTGTAGCTTACCTTTTCGTCTTTGGTAGCGGGCTTCTCGGGTCCTCTTTCTTTGGGAACCTTCTCGACGGTGATCAAACAGTGTCTAAAGCGTGGATCATTCTTCTAGAGTTATATCCTGGCTTCTCTCTGTACCGAGGCTTATACGAGTTTGGCCAATATACCTCCGAAGCGAAAATAACGAAGACTGGTGGTATGGGTTGGGGGAATTTGAATGATAGGGCAAATGGTATGAGAGACGTCTTGACCATCATGCCATTAGAGTGGGCCGTGCTGCTGCTTCTTGCATTTTACATAGATCAAGTTGTGACATGTGGAAAATCTCCTCTTTTCTTCTTGCCAAGAAAGAAAGCACCAGCTTTCCAAATCCCTAGTATGGAAAGGCATGGATCTAAAAGTTTTGGTGACATGGAGAAACCTGATGTCGCTCAAGAGAAGGAAAAAGTTGAGAAGCTGATGGAAGAAGCAAAGTATACAAGTCATGTTGTGATATGTGACAACATAAAGAAGGTGTATCCAGGAAGAGATGGAAACCCTGAGAAATTTGCAGTGAGAGGGTTGTCTCTTGCTTTGCCTCAAGGGGAATGCTTTGGTATGCTTGGTCCTAGTGGTGCAGGGAAGACCTCTTTTATTGAAATGATGATTGGTCTCGCAAAGCCAACTACTGGCACAGCCTATGTTCAGGGCTTGGACCTTGTAACTCAAATGAATGAAATATATTCCTGCATTGGTGTTTGTCCACAGCACGACCTACTATGGGCAACCCTAACAGGAAGAGAGCATCTACTATTTTACGGCAGACTTAAGAACCTTAAAGGTTCTGACTTAACCAAAGCAGTGGAAGATTCTTTGAAGAGTCTGAATCTATTTAATGGTGGGGTTGCTGACAAACGAGCAGGGCAATATAGTGGAGGTATGAAGAGAAGGCTTAGCGTCGCCATTTCACTCATAGGGAATCCCATAGTAATTGTGCATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
HMA

Protein Analysis

773

Amino Acids

87.0

Weight (kDa)

7.12

Isoelectric Point (pI)

39.56

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
ABC2_membrane_3 PF12698 234 - 532 1.5e-15 ABC-2 family transporter protein
ABC_tran PF00005 633 - 771 9.3e-20 ABC transporter
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 1587
AccB7I CCANNNNNTGG 2 cut(s) 421, 2009
AccI GTMKAC 1 cut(s) 1817
AccIII TCCGGA 1 cut(s) 265
AciI CCGC 2 cut(s) 5, 1374
AclWI GGATC 5 cut(s) 326, 530, 543, 1448, 1741
AcoI YGGCCR 4 cut(s) 412, 441, 641, 1498
AcsI RAATTY 6 cut(s) 8, 460, 491, 865, 1552, 1886
AcyI GRCGYC 2 cut(s) 1067, 1584
AfaI GTAC 3 cut(s) 827, 1179, 1478
AfeI AGCGCT 1 cut(s) 1296
AfiI CCNNNNNNNGG 6 cut(s) 421, 439, 915, 1720, 2009, 2101
AflII CTTAAG 1 cut(s) 2147
AflIII ACRYGT 1 cut(s) 1655
AjnI CCWGG 4 cut(s) 292, 846, 1462, 1861
AjuI GAANNNNNNNTTGG 2 cut(s) 1971, 2003
AluBI AGCT 7 cut(s) 26, 122, 758, 1048, 1352, 1703, 1798
AluI AGCT 7 cut(s) 26, 122, 758, 1048, 1352, 1703, 1798
Alw26I GTCTC 6 cut(s) 221, 671, 1074, 1575, 1911, 1997
AlwI GGATC 5 cut(s) 326, 530, 543, 1448, 1741
Ama87I CYCGRG 2 cut(s) 335, 1382
Aor13HI TCCGGA 1 cut(s) 265
Aor51HI AGCGCT 1 cut(s) 1296
ApaI GGGCCC 1 cut(s) 224
ApeKI GCWGC 3 cut(s) 1337, 1618, 1621
ApoI RAATTY 6 cut(s) 8, 460, 491, 865, 1552, 1886
AspLEI GCGC 3 cut(s) 95, 106, 1297
AsuC2I CCSGG 2 cut(s) 394, 1055
AsuHPI GGTGA 4 cut(s) 382, 1139, 1427, 1760
AvaI CYCGRG 2 cut(s) 335, 1382
AvaII GGWCC 6 cut(s) 486, 561, 1016, 1386, 1946, 2035
AxyI CCTNAGG 2 cut(s) 188, 972
BaeGI GKGCMC 1 cut(s) 224
BalI TGGCCA 2 cut(s) 414, 1500
BamHI GGATCC 1 cut(s) 535
BanII GRGCYC 4 cut(s) 224, 301, 342, 616
BbsI GAAGAC 2 cut(s) 1535, 1970
BbvI GCAGC 3 cut(s) 1324, 1605, 1608
BccI CCATC 4 cut(s) 1124, 1601, 1795, 1865
BceAI ACGGC 4 cut(s) 128, 1020, 1598, 2155
BcgI CGANNNNNNTGC 4 cut(s) 72, 106, 121, 155
BciT130I CCWGG 4 cut(s) 294, 848, 1464, 1863
BciVI GTATCC 1 cut(s) 1869
BclI TGATCA 1 cut(s) 1417
BcnI CCSGG 2 cut(s) 394, 1055
BcoDI GTCTC 6 cut(s) 221, 671, 1074, 1575, 1911, 1997
BfaI CTAG 5 cut(s) 27, 1332, 1451, 1716, 1950
BfmI CTRYAG 2 cut(s) 572, 1341
BfoI RGCGCY 1 cut(s) 1298
BfrI CTTAAG 1 cut(s) 2147
BfuI GTATCC 1 cut(s) 1869
BisI GCNGC 3 cut(s) 1338, 1619, 1622
BlpI GCTNAGC 1 cut(s) 2273
BlsI GCNGC 3 cut(s) 1339, 1620, 1623
Bme1390I CCNGG 6 cut(s) 294, 394, 848, 1055, 1464, 1863
Bme18I GGWCC 6 cut(s) 486, 561, 1016, 1386, 1946, 2035
BmeT110I CYCGRG 2 cut(s) 335, 1382
BmiI GGNNCC 6 cut(s) 222, 298, 537, 615, 1387, 1403
BmrFI CCNGG 6 cut(s) 294, 394, 848, 1055, 1464, 1863
BmsI GCATC 3 cut(s) 662, 908, 2134
BpiI GAAGAC 2 cut(s) 1535, 1970
BpmI CTGGAG 1 cut(s) 600
Bpu1102I GCTNAGC 1 cut(s) 2273
BpuEI CTTGAG 2 cut(s) 1758, 1905
BpuMI CCSGG 2 cut(s) 394, 1055
BsaBI GATNNNNATC 2 cut(s) 386, 597
BsaHI GRCGYC 2 cut(s) 1067, 1584
BsaI GGTCTC 1 cut(s) 1997
BsaJI CCNNGG 5 cut(s) 209, 279, 847, 1123, 1480
BsaWI WCCGGW 1 cut(s) 265
BsaXI ACNNNNNCTCC 2 cut(s) 341, 371
Bsc4I CCNNNNNNNGG 6 cut(s) 421, 439, 915, 1720, 2009, 2101
Bse118I RCCGGY 2 cut(s) 439, 639
Bse1I ACTGG 4 cut(s) 617, 1145, 1537, 2014
Bse21I CCTNAGG 2 cut(s) 188, 972
Bse3DI GCAATG 1 cut(s) 99
Bse8I GATNNNNATC 2 cut(s) 386, 597
BseAI TCCGGA 1 cut(s) 265
BseBI CCWGG 4 cut(s) 294, 848, 1464, 1863
BseDI CCNNGG 5 cut(s) 209, 279, 847, 1123, 1480
BseGI GGATG 2 cut(s) 595, 1149
BseJI GATNNNNATC 2 cut(s) 386, 597
BseLI CCNNNNNNNGG 6 cut(s) 421, 439, 915, 1720, 2009, 2101
BseMI GCAATG 1 cut(s) 99
BseMII CTCAG 4 cut(s) 70, 807, 1088, 1872
BseNI ACTGG 4 cut(s) 617, 1145, 1537, 2014
BseRI GAGGAG 3 cut(s) 252, 362, 1659
BseSI GKGCMC 1 cut(s) 224
BseX3I CGGCCG 1 cut(s) 441
BseXI GCAGC 3 cut(s) 1324, 1605, 1608
BsgI GTGCAG 1 cut(s) 1977
Bsh1285I CGRYCG 1 cut(s) 444
BsiEI CGRYCG 1 cut(s) 444
BsiHKCI CYCGRG 2 cut(s) 335, 1382
BsiSI CCGG 6 cut(s) 266, 393, 440, 468, 640, 1055
BslI CCNNNNNNNGG 6 cut(s) 421, 439, 915, 1720, 2009, 2101
BsmAI GTCTC 6 cut(s) 221, 671, 1074, 1575, 1911, 1997
BsmBI CGTCTC 2 cut(s) 1074, 1575
BsmI GAATGC 2 cut(s) 200, 1934
Bso31I GGTCTC 1 cut(s) 1997
BsoBI CYCGRG 2 cut(s) 335, 1382
Bsp120I GGGCCC 1 cut(s) 220
Bsp1286I GDGCHC 4 cut(s) 224, 301, 342, 616
Bsp13I TCCGGA 1 cut(s) 265
Bsp143I GATC 8 cut(s) 331, 535, 553, 598, 1417, 1440, 1642, 1733
Bsp1720I GCTNAGC 1 cut(s) 2273
BspACI CCGC 2 cut(s) 5, 1374
BspCNI CTCAG 4 cut(s) 69, 806, 1089, 1873
BspEI TCCGGA 1 cut(s) 265
BspLI GGNNCC 6 cut(s) 222, 298, 537, 615, 1387, 1403
BspMAI CTGCAG 1 cut(s) 576
BspPI GGATC 5 cut(s) 326, 530, 543, 1448, 1741
BspTI CTTAAG 1 cut(s) 2147
BspTNI GGTCTC 1 cut(s) 1997
BsrDI GCAATG 1 cut(s) 99
BsrFI RCCGGY 2 cut(s) 439, 639
BsrI ACTGG 4 cut(s) 617, 1145, 1537, 2014
BssAI RCCGGY 2 cut(s) 439, 639
BssECI CCNNGG 5 cut(s) 209, 279, 847, 1123, 1480
BssMI GATC 8 cut(s) 331, 535, 553, 598, 1417, 1440, 1642, 1733
BssNAI GTATAC 1 cut(s) 1818
BssNI GRCGYC 2 cut(s) 1067, 1584
BssT1I CCWWGG 2 cut(s) 209, 279
Bst1107I GTATAC 1 cut(s) 1818
Bst2UI CCWGG 4 cut(s) 294, 848, 1464, 1863
Bst4CI ACNGT 5 cut(s) 246, 720, 1345, 1415, 1426
Bst6I CTCTTC 5 cut(s) 197, 1861, 2113, 2192, 2258
BstACI GRCGYC 2 cut(s) 1067, 1584
BstAFI CTTAAG 1 cut(s) 2147
BstC8I GCNNGC 4 cut(s) 276, 441, 1299, 1376
BstDEI CTNAG 8 cut(s) 56, 188, 231, 793, 972, 1097, 1881, 2273
BstF5I GGATG 2 cut(s) 595, 1149
BstH2I RGCGCY 1 cut(s) 1298
BstHHI GCGC 3 cut(s) 95, 106, 1297
BstKTI GATC 8 cut(s) 334, 538, 556, 601, 1420, 1443, 1645, 1736
BstMAI GTCTC 6 cut(s) 221, 671, 1074, 1575, 1911, 1997
BstMBI GATC 8 cut(s) 331, 535, 553, 598, 1417, 1440, 1642, 1733
BstMCI CGRYCG 1 cut(s) 444
BstMWI GCNNNNNNNGC 3 cut(s) 101, 905, 1294
BstNI CCWGG 4 cut(s) 294, 848, 1464, 1863
BstNSI RCATGY 1 cut(s) 1659
BstSCI CCNGG 6 cut(s) 292, 392, 846, 1053, 1462, 1861
BstSFI CTRYAG 2 cut(s) 572, 1341
BstSLI GKGCMC 1 cut(s) 224
BstV1I GCAGC 3 cut(s) 1324, 1605, 1608
BstV2I GAAGAC 2 cut(s) 1535, 1970
BstX2I RGATCY 2 cut(s) 535, 1733
BstXI CCANNNNNNTGG 3 cut(s) 410, 1608, 2182
BstYI RGATCY 2 cut(s) 535, 1733
BstZ17I GTATAC 1 cut(s) 1818
BstZI CGGCCG 1 cut(s) 441
Bsu36I CCTNAGG 2 cut(s) 188, 972
BsuI GTATCC 1 cut(s) 1869
BtsCI GGATG 2 cut(s) 595, 1149
BtsI GCAGTG 2 cut(s) 1899, 2187
BtsIMutI CAGTG 5 cut(s) 251, 1007, 1431, 1899, 2187
Cac8I GCNNGC 4 cut(s) 276, 441, 1299, 1376
CfoI GCGC 3 cut(s) 95, 106, 1297
Cfr10I RCCGGY 2 cut(s) 439, 639
CseI GACGC 2 cut(s) 1056, 2266
Csp6I GTAC 3 cut(s) 826, 1178, 1477
CviAII CATG 8 cut(s) 1032, 1118, 1241, 1597, 1656, 1730, 1753, 1826
CviQI GTAC 3 cut(s) 826, 1178, 1477
DdeI CTNAG 8 cut(s) 56, 188, 231, 793, 972, 1097, 1881, 2273
DpnI GATC 8 cut(s) 333, 537, 555, 600, 1419, 1442, 1644, 1735
DpnII GATC 8 cut(s) 331, 535, 553, 598, 1417, 1440, 1642, 1733
EaeI YGGCCR 4 cut(s) 412, 441, 641, 1498
EagI CGGCCG 1 cut(s) 441
Eam1104I CTCTTC 5 cut(s) 197, 1861, 2113, 2192, 2258
EarI CTCTTC 5 cut(s) 197, 1861, 2113, 2192, 2258
EciI GGCGGA 1 cut(s) 20
EclXI CGGCCG 1 cut(s) 441
Eco130I CCWWGG 2 cut(s) 209, 279
Eco24I GRGCYC 4 cut(s) 224, 301, 342, 616
Eco31I GGTCTC 1 cut(s) 1997
Eco32I GATATC 1 cut(s) 784
Eco47I GGWCC 6 cut(s) 486, 561, 1016, 1386, 1946, 2035
Eco47III AGCGCT 1 cut(s) 1296
Eco52I CGGCCG 1 cut(s) 441
Eco81I CCTNAGG 2 cut(s) 188, 972
Eco88I CYCGRG 2 cut(s) 335, 1382
EcoO109I RGGNCCY 2 cut(s) 561, 1386
EcoRII CCWGG 4 cut(s) 292, 846, 1462, 1861
EcoRV GATATC 1 cut(s) 784
EcoT14I CCWWGG 2 cut(s) 209, 279
EcoT22I ATGCAT 1 cut(s) 1119
EcoT38I GRGCYC 4 cut(s) 224, 301, 342, 616
ErhI CCWWGG 2 cut(s) 209, 279
Esp3I CGTCTC 2 cut(s) 1074, 1575
FaeI CATG 8 cut(s) 1035, 1121, 1244, 1600, 1659, 1733, 1756, 1829
FatI CATG 8 cut(s) 1031, 1117, 1240, 1596, 1655, 1729, 1752, 1825
FauI CCCGC 1 cut(s) 1367
FauNDI CATATG 1 cut(s) 821
FbaI TGATCA 1 cut(s) 1417
FblI GTMKAC 1 cut(s) 1817
Fnu4HI GCNGC 3 cut(s) 1338, 1619, 1622
FokI GGATG 2 cut(s) 602, 1156
FriOI GRGCYC 4 cut(s) 224, 301, 342, 616
Fsp4HI GCNGC 3 cut(s) 1338, 1619, 1622
FspBI CTAG 5 cut(s) 27, 1332, 1451, 1716, 1950
GlaI GCGC 3 cut(s) 94, 105, 1296
GluI GCNGC 3 cut(s) 1338, 1619, 1622
GsuI CTGGAG 1 cut(s) 600
HaeII RGCGCY 1 cut(s) 1298
HapII CCGG 6 cut(s) 266, 393, 440, 468, 640, 1055
HgaI GACGC 2 cut(s) 1056, 2266
HhaI GCGC 3 cut(s) 95, 106, 1297
Hin1I GRCGYC 2 cut(s) 1067, 1584
Hin1II CATG 8 cut(s) 1035, 1121, 1244, 1600, 1659, 1733, 1756, 1829
Hin6I GCGC 3 cut(s) 93, 104, 1295
HinP1I GCGC 3 cut(s) 93, 104, 1295
HpaII CCGG 6 cut(s) 266, 393, 440, 468, 640, 1055
HphI GGTGA 4 cut(s) 382, 1139, 1427, 1760
Hpy166II GTNNAC 5 cut(s) 506, 1211, 1282, 1818, 2084
Hpy188III TCNNGA 8 cut(s) 157, 266, 335, 995, 1409, 1451, 1588, 1775
Hpy8I GTNNAC 5 cut(s) 506, 1211, 1282, 1818, 2084
Hpy99I CGWCG 3 cut(s) 857, 1415, 2282
HpyAV CCTTC 8 cut(s) 267, 730, 923, 1001, 1415, 1774, 1846, 2262
HpyCH4III ACNGT 5 cut(s) 246, 720, 1345, 1415, 1426
HpyCH4IV ACGT 2 cut(s) 883, 1584
HpyF10VI GCNNNNNNNGC 3 cut(s) 101, 905, 1294
HpyF3I CTNAG 8 cut(s) 56, 188, 231, 793, 972, 1097, 1881, 2273
HpySE526I ACGT 2 cut(s) 883, 1584
Hsp92I GRCGYC 2 cut(s) 1067, 1584
Hsp92II CATG 8 cut(s) 1035, 1121, 1244, 1600, 1659, 1733, 1756, 1829
HspAI GCGC 3 cut(s) 93, 104, 1295
Kpn2I TCCGGA 1 cut(s) 265
KroI GCCGGC 1 cut(s) 439
KroNI GCCGGC 1 cut(s) 441
Ksp22I TGATCA 1 cut(s) 1417
Kzo9I GATC 8 cut(s) 331, 535, 553, 598, 1417, 1440, 1642, 1733
LmnI GCTCC 2 cut(s) 296, 619
Lsp1109I GCAGC 3 cut(s) 1324, 1605, 1608
LweI GCATC 3 cut(s) 662, 908, 2134
MaeI CTAG 5 cut(s) 27, 1332, 1451, 1716, 1950
MaeII ACGT 2 cut(s) 883, 1584
MaeIII GTNAC 6 cut(s) 376, 814, 1651, 1748, 1838, 2041
MalI GATC 8 cut(s) 333, 537, 555, 600, 1419, 1442, 1644, 1735
MboI GATC 8 cut(s) 331, 535, 553, 598, 1417, 1440, 1642, 1733
MfeI CAATTG 1 cut(s) 180
MflI RGATCY 2 cut(s) 535, 1733
MhlI GDGCHC 4 cut(s) 224, 301, 342, 616
MlsI TGGCCA 2 cut(s) 414, 1500
MluNI TGGCCA 2 cut(s) 414, 1500
MlyI GAGTC 2 cut(s) 557, 2209
MmeI TCCRAC 1 cut(s) 1180
Mox20I TGGCCA 2 cut(s) 414, 1500
Mph1103I ATGCAT 1 cut(s) 1119
MroI TCCGGA 1 cut(s) 265
MroNI GCCGGC 1 cut(s) 439
MscI TGGCCA 2 cut(s) 414, 1500
MseI TTAA 9 cut(s) 68, 113, 647, 960, 2148, 2157, 2171, 2214, 2320
MslI CAYNNNNRTG 2 cut(s) 513, 1606
Msp20I TGGCCA 2 cut(s) 414, 1500
MspA1I CMGCKG 1 cut(s) 1048
MspCI CTTAAG 1 cut(s) 2147
MspI CCGG 6 cut(s) 266, 393, 440, 468, 640, 1055
MspR9I CCNGG 6 cut(s) 294, 394, 848, 1055, 1464, 1863
MunI CAATTG 1 cut(s) 180
Mva1269I GAATGC 2 cut(s) 200, 1934
MvaI CCWGG 4 cut(s) 294, 848, 1464, 1863
MwoI GCNNNNNNNGC 3 cut(s) 101, 905, 1294
NaeI GCCGGC 1 cut(s) 441
NciI CCSGG 2 cut(s) 394, 1055
NdeI CATATG 1 cut(s) 821
NdeII GATC 8 cut(s) 331, 535, 553, 598, 1417, 1440, 1642, 1733
NgoMIV GCCGGC 1 cut(s) 439
NlaIII CATG 8 cut(s) 1035, 1121, 1244, 1600, 1659, 1733, 1756, 1829
NlaIV GGNNCC 6 cut(s) 222, 298, 537, 615, 1387, 1403
NmeAIII GCCGAG 1 cut(s) 47
NmuCI GTSAC 5 cut(s) 376, 814, 1651, 1748, 1838
NsiI ATGCAT 1 cut(s) 1119
NspI RCATGY 1 cut(s) 1659
PciI ACATGT 1 cut(s) 1655
PcsI WCGNNNNNNNCGW 3 cut(s) 313, 834, 880
PctI GAATGC 2 cut(s) 200, 1934
PdiI GCCGGC 1 cut(s) 441
PfeI GAWTC 8 cut(s) 577, 830, 839, 877, 1147, 2189, 2206, 2299
PflMI CCANNNNNTGG 2 cut(s) 421, 2009
PfoI TCCNGGA 1 cut(s) 1861
PkrI GCNGC 3 cut(s) 1339, 1620, 1623
PleI GAGTC 2 cut(s) 556, 2208
PpsI GAGTC 2 cut(s) 556, 2208
PpuMI RGGWCCY 2 cut(s) 561, 1386
PscI ACATGT 1 cut(s) 1655
Psp5II RGGWCCY 2 cut(s) 561, 1386
Psp6I CCWGG 4 cut(s) 292, 846, 1462, 1861
PspGI CCWGG 4 cut(s) 292, 846, 1462, 1861
PspN4I GGNNCC 6 cut(s) 222, 298, 537, 615, 1387, 1403
PspOMI GGGCCC 1 cut(s) 220
PspPPI RGGWCCY 2 cut(s) 561, 1386
PstI CTGCAG 1 cut(s) 576
PsuI RGATCY 2 cut(s) 535, 1733
PvuII CAGCTG 1 cut(s) 1048
RsaI GTAC 3 cut(s) 827, 1179, 1478
RsaNI GTAC 3 cut(s) 826, 1178, 1477
RseI CAYNNNNRTG 2 cut(s) 513, 1606
SaqAI TTAA 9 cut(s) 68, 113, 647, 960, 2148, 2157, 2171, 2214, 2320
SatI GCNGC 3 cut(s) 1338, 1619, 1622
Sau3AI GATC 8 cut(s) 331, 535, 553, 598, 1417, 1440, 1642, 1733
SchI GAGTC 2 cut(s) 557, 2209
ScrFI CCNGG 6 cut(s) 294, 394, 848, 1055, 1464, 1863
SduI GDGCHC 4 cut(s) 224, 301, 342, 616
SfaNI GCATC 3 cut(s) 662, 908, 2134
SfcI CTRYAG 2 cut(s) 572, 1341
SinI GGWCC 6 cut(s) 486, 561, 1016, 1386, 1946, 2035
SmiMI CAYNNNNRTG 2 cut(s) 513, 1606
SmlI CTYRAG 3 cut(s) 1773, 1920, 2147
SmoI CTYRAG 3 cut(s) 1773, 1920, 2147
SsiI CCGC 2 cut(s) 5, 1374
SspI AATATT 1 cut(s) 1154
SspMI CTAG 5 cut(s) 27, 1332, 1451, 1716, 1950
StyD4I CCNGG 6 cut(s) 292, 392, 846, 1053, 1462, 1861
StyI CCWWGG 2 cut(s) 209, 279
TaaI ACNGT 5 cut(s) 246, 720, 1345, 1415, 1426
TaiI ACGT 2 cut(s) 886, 1587
TaqI TCGA 3 cut(s) 546, 951, 1410
TatI WGTACW 1 cut(s) 1177
TfiI GAWTC 8 cut(s) 577, 830, 839, 877, 1147, 2189, 2206, 2299
Tru1I TTAA 9 cut(s) 68, 113, 647, 960, 2148, 2157, 2171, 2214, 2320
Tru9I TTAA 9 cut(s) 68, 113, 647, 960, 2148, 2157, 2171, 2214, 2320
TscAI CASTG 5 cut(s) 251, 1014, 1431, 1899, 2187
TseFI GTSAC 5 cut(s) 376, 814, 1651, 1748, 1838
TseI GCWGC 3 cut(s) 1337, 1618, 1621
Tsp45I GTSAC 5 cut(s) 376, 814, 1651, 1748, 1838
TspDTI ATGAA 9 cut(s) 609, 729, 777, 948, 1020, 1124, 2066, 2070, 2276
TspGWI ACGGA 2 cut(s) 494, 889
TspRI CASTG 5 cut(s) 251, 1014, 1431, 1899, 2187
Van91I CCANNNNNTGG 2 cut(s) 421, 2009
Vha464I CTTAAG 1 cut(s) 2147
VpaK11BI GGWCC 6 cut(s) 486, 561, 1016, 1386, 1946, 2035
XapI RAATTY 6 cut(s) 8, 460, 491, 865, 1552, 1886
XbaI TCTAGA 1 cut(s) 1450
XceI RCATGY 1 cut(s) 1659
XcmI CCANNNNNNNNNTGG 1 cut(s) 496
XmiI GTMKAC 1 cut(s) 1817
XspI CTAG 5 cut(s) 27, 1332, 1451, 1716, 1950
ZraI GACGTC 1 cut(s) 1585
Zsp2I ATGCAT 1 cut(s) 1119
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.