Prupe.2G301600_v2.0.a1

FK506-binding protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
OG0000998
Physical Location & Seq
Forward (+)
28941804 .. 28943190
1387 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G301600.1

Sequence Viewer

Length: 396 bp
ATGAAGAAAGTAGTGTTGAAATTGGAATTGTACGACGAGAAGGTTAAGAAGAAAGCCATGAGGGCAGTCTCAGGGCTTGAAGGGCTTGATTCAATTTCCATGGATATGAAGGACAAGAAACTGACGGTGACAGGGGACATAGATCCAGTAAATTTGGTGAGCAAACTGAGGAAGCTTTGCCACACAGATATAGTGTCAGTGGGACCAGCAAAAGAGGAGAAGAAGAAGGAGGAGCCCAAGAAAGACGATCCAAAGAAGGGAGATGAGAAGAAGAAAGATCCGAAGGACGAAATGGCTGAGCTTATAAAGGCCTACCAGGCTCATTATCCTCCCATGCCTGCATACTATTACGTAAGAAGCCAAGAAGAGGATCCCAATTCTTGTATCATTTCCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
HMA

Protein Analysis

132

Amino Acids

14.93

Weight (kDa)

8.67

Isoelectric Point (pI)

41.04

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 305
AclWI GGATC 5 cut(s) 137, 242, 272, 365, 378
AcsI RAATTY 1 cut(s) 151
AfaI GTAC 1 cut(s) 32
AfiI CCNNNNNNNGG 2 cut(s) 257, 367
AgsI TTSAA 3 cut(s) 19, 80, 93
AjnI CCWGG 1 cut(s) 315
AluBI AGCT 2 cut(s) 175, 301
AluI AGCT 2 cut(s) 175, 301
Alw26I GTCTC 1 cut(s) 73
AlwI GGATC 5 cut(s) 137, 242, 272, 365, 378
AoxI GGCC 1 cut(s) 309
ApoI RAATTY 1 cut(s) 151
AspS9I GGNCC 1 cut(s) 203
AsuHPI GGTGA 2 cut(s) 139, 169
AvaII GGWCC 1 cut(s) 203
BamHI GGATCC 1 cut(s) 370
BanII GRGCYC 1 cut(s) 237
BciT130I CCWGG 1 cut(s) 317
BcoDI GTCTC 1 cut(s) 73
BglI GCCNNNNNGGC 2 cut(s) 62, 317
BlpI GCTNAGC 1 cut(s) 297
Bme1390I CCNGG 1 cut(s) 317
Bme18I GGWCC 1 cut(s) 203
BmgT120I GGNCC 1 cut(s) 203
BmiI GGNNCC 3 cut(s) 204, 234, 372
BmrFI CCNGG 1 cut(s) 317
Bpu1102I GCTNAGC 1 cut(s) 297
BsaAI YACGTR 1 cut(s) 352
BsaJI CCNNGG 1 cut(s) 99
Bsc4I CCNNNNNNNGG 2 cut(s) 257, 367
Bse1I ACTGG 1 cut(s) 146
BseBI CCWGG 1 cut(s) 317
BseDI CCNNGG 1 cut(s) 99
BseLI CCNNNNNNNGG 2 cut(s) 257, 367
BseMII CTCAG 3 cut(s) 84, 158, 288
BseNI ACTGG 1 cut(s) 146
BseRI GAGGAG 2 cut(s) 230, 245
BshFI GGCC 1 cut(s) 311
BslFI GGGAC 2 cut(s) 149, 216
BslI CCNNNNNNNGG 2 cut(s) 257, 367
BsmAI GTCTC 1 cut(s) 73
BsmFI GGGAC 2 cut(s) 149, 216
BsnI GGCC 1 cut(s) 311
Bsp1286I GDGCHC 1 cut(s) 237
Bsp143I GATC 4 cut(s) 142, 247, 277, 370
Bsp1720I GCTNAGC 1 cut(s) 297
Bsp19I CCATGG 1 cut(s) 99
BspANI GGCC 1 cut(s) 311
BspCNI CTCAG 3 cut(s) 83, 159, 289
BspLI GGNNCC 3 cut(s) 204, 234, 372
BspPI GGATC 5 cut(s) 137, 242, 272, 365, 378
BsrI ACTGG 1 cut(s) 146
BssECI CCNNGG 1 cut(s) 99
BssMI GATC 4 cut(s) 142, 247, 277, 370
BssT1I CCWWGG 1 cut(s) 99
Bst2UI CCWGG 1 cut(s) 317
Bst4CI ACNGT 1 cut(s) 127
Bst6I CTCTTC 1 cut(s) 360
BstBAI YACGTR 1 cut(s) 352
BstC8I GCNNGC 1 cut(s) 339
BstDEI CTNAG 3 cut(s) 70, 167, 297
BstDSI CCRYGG 1 cut(s) 99
BstKTI GATC 4 cut(s) 145, 250, 280, 373
BstMAI GTCTC 1 cut(s) 73
BstMBI GATC 4 cut(s) 142, 247, 277, 370
BstMWI GCNNNNNNNGC 3 cut(s) 62, 82, 317
BstNI CCWGG 1 cut(s) 317
BstSCI CCNGG 1 cut(s) 315
BstSNI TACGTA 1 cut(s) 352
BstX2I RGATCY 3 cut(s) 142, 277, 370
BstYI RGATCY 3 cut(s) 142, 277, 370
BsuRI GGCC 1 cut(s) 311
BtgI CCRYGG 1 cut(s) 99
BtsIMutI CAGTG 1 cut(s) 204
Cac8I GCNNGC 1 cut(s) 339
Cfr13I GGNCC 1 cut(s) 203
Csp6I GTAC 1 cut(s) 31
CviAII CATG 3 cut(s) 58, 100, 334
CviQI GTAC 1 cut(s) 31
DdeI CTNAG 3 cut(s) 70, 167, 297
DpnI GATC 4 cut(s) 144, 249, 279, 372
DpnII GATC 4 cut(s) 142, 247, 277, 370
Eam1104I CTCTTC 1 cut(s) 360
EarI CTCTTC 1 cut(s) 360
Eco105I TACGTA 1 cut(s) 352
Eco130I CCWWGG 1 cut(s) 99
Eco147I AGGCCT 1 cut(s) 311
Eco24I GRGCYC 1 cut(s) 237
Eco47I GGWCC 1 cut(s) 203
EcoRII CCWGG 1 cut(s) 315
EcoT14I CCWWGG 1 cut(s) 99
EcoT38I GRGCYC 1 cut(s) 237
ErhI CCWWGG 1 cut(s) 99
FaeI CATG 3 cut(s) 61, 103, 337
FaiI YATR 8 cut(s) 59, 101, 107, 140, 191, 305, 335, 343
FaqI GGGAC 2 cut(s) 149, 216
FatI CATG 3 cut(s) 57, 99, 333
FriOI GRGCYC 1 cut(s) 237
HaeIII GGCC 1 cut(s) 311
Hin1II CATG 3 cut(s) 61, 103, 337
HindIII AAGCTT 1 cut(s) 173
HinfI GANTC 1 cut(s) 89
HphI GGTGA 2 cut(s) 139, 169
Hpy188I TCNGA 1 cut(s) 282
Hpy188III TCNNGA 1 cut(s) 393
Hpy99I CGWCG 1 cut(s) 38
HpyAV CCTTC 6 cut(s) 34, 74, 103, 220, 250, 277
HpyCH4III ACNGT 1 cut(s) 127
HpyCH4IV ACGT 1 cut(s) 351
HpyCH4V TGCA 1 cut(s) 341
HpyF10VI GCNNNNNNNGC 3 cut(s) 62, 82, 317
HpyF3I CTNAG 3 cut(s) 70, 167, 297
HpySE526I ACGT 1 cut(s) 351
Hsp92II CATG 3 cut(s) 61, 103, 337
Kzo9I GATC 4 cut(s) 142, 247, 277, 370
LmnI GCTCC 1 cut(s) 232
LpnPI CCDG 7 cut(s) 57, 117, 159, 219, 302, 329, 351
MaeII ACGT 1 cut(s) 351
MaeIII GTNAC 1 cut(s) 127
MalI GATC 4 cut(s) 144, 249, 279, 372
MboI GATC 4 cut(s) 142, 247, 277, 370
MboII GAAGA 7 cut(s) 16, 61, 232, 235, 280, 283, 377
MflI RGATCY 3 cut(s) 142, 277, 370
MhlI GDGCHC 1 cut(s) 237
MluCI AATT 5 cut(s) 20, 26, 93, 151, 376
MnlI CCTC 6 cut(s) 54, 162, 208, 223, 339, 361
MseI TTAA 1 cut(s) 45
MslI CAYNNNNRTG 1 cut(s) 104
MspR9I CCNGG 1 cut(s) 317
MvaI CCWGG 1 cut(s) 317
MwoI GCNNNNNNNGC 3 cut(s) 62, 82, 317
NcoI CCATGG 1 cut(s) 99
NdeII GATC 4 cut(s) 142, 247, 277, 370
NlaIII CATG 3 cut(s) 61, 103, 337
NlaIV GGNNCC 3 cut(s) 204, 234, 372
NmuCI GTSAC 1 cut(s) 127
PceI AGGCCT 1 cut(s) 311
PfeI GAWTC 1 cut(s) 89
Ppu21I YACGTR 1 cut(s) 352
PsiI TTATAA 1 cut(s) 305
Psp6I CCWGG 1 cut(s) 315
PspGI CCWGG 1 cut(s) 315
PspN4I GGNNCC 3 cut(s) 204, 234, 372
PspPI GGNCC 1 cut(s) 203
PsuI RGATCY 3 cut(s) 142, 277, 370
RsaI GTAC 1 cut(s) 32
RsaNI GTAC 1 cut(s) 31
RseI CAYNNNNRTG 1 cut(s) 104
SaqAI TTAA 1 cut(s) 45
Sau3AI GATC 4 cut(s) 142, 247, 277, 370
Sau96I GGNCC 1 cut(s) 203
ScrFI CCNGG 1 cut(s) 317
SduI GDGCHC 1 cut(s) 237
SetI ASST 4 cut(s) 45, 177, 303, 354
SinI GGWCC 1 cut(s) 203
SmiMI CAYNNNNRTG 1 cut(s) 104
SnaBI TACGTA 1 cut(s) 352
Sse9I AATT 5 cut(s) 20, 26, 93, 151, 376
SseBI AGGCCT 1 cut(s) 311
StuI AGGCCT 1 cut(s) 311
StyD4I CCNGG 1 cut(s) 315
StyI CCWWGG 1 cut(s) 99
TaaI ACNGT 1 cut(s) 127
TaiI ACGT 1 cut(s) 354
TasI AATT 5 cut(s) 20, 26, 93, 151, 376
TfiI GAWTC 1 cut(s) 89
Tru1I TTAA 1 cut(s) 45
Tru9I TTAA 1 cut(s) 45
TscAI CASTG 1 cut(s) 204
TseFI GTSAC 1 cut(s) 127
Tsp45I GTSAC 1 cut(s) 127
TspDTI ATGAA 2 cut(s) 17, 122
TspRI CASTG 1 cut(s) 204
VpaK11BI GGWCC 1 cut(s) 203
XapI RAATTY 1 cut(s) 151
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.