FvH4_5g04850

No description available

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
Physical Location & Seq
Forward (+)
2890212 .. 2899615
9404 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g04850.t1

Sequence Viewer

Length: 3927 bp
ATGGAACTGGATTTAGTAGCAAGTGGACTCCAAGACGACGACGCTTTTGGAGTTGATGAGAATTACAGCAATGAGAATCTTGTATTGGAGGGCGAAAATGAAACGTGCGGGATATGCATGGATACAATTATCGATAGGGGTGTTCTGGATTGCTGCCAGCACTGGTTTTGTTTTGCATGCATTGACAATTGGGCTACTATTACAAATCTTTGTCCGCTTTGCCAGAACGAATTTCAAGTGATCACATGTGTTCCGGTATATGAAACTGTTGGGAGCAACAAATTGGATGATGATCCATCTGCCAGAGATGAAGATTGGAGTATTGAAGGGACGAATAACACTGTCTCATTTCCATCATACTATATTGATGAAAACTCAGTTATTTGCTTGGATGGAGATGGTTGCAAGGTTCGAAGTGGATCAGCAAAGATGGAGGAGGATTCCAATCTTGATACATCAATTGCCTGTGATTCATGCGACTTATGGTATCATGCTTTCTGTGTGGGATTTGATCCTGAAAGCACATCTGAGAGTACGTGGTTATGCCCCAGATGTGTAGTTGGTGAAATGTCACAAAACTCCGACGCAGTACAGAGGCCCGACGGCCAGTGTGATCTTGAAAATTGTGATTCTTTGACTGAGGATACTTTTTCAAGAAAGGTGTCTGTATCTTCTGTGGATACTGGTGACACGACTGTTGTAGTCTCAATGGTTGGAAATTCAGGTCAGAGCATTTTGCCAACCCTCGAAGTTGGCAAGGACTTTGAAACTGAACCACTGGTATCAGCTTCTGAAGATTGCCACAAGTTGGAAAAACCTTCAGGGATGAAAACTATTAAACCGGAACCACAGGAATTAGAACTGTCCCCATCTTGTGATACCTCCTTCAGTTTACCTTCACATGCTTTAGCACATAAGCAGCTTTGGTCGAGTACTGTTGAATCAATGAATGAGCTTAGAAGCTTTGATGGCGTCAAAAATTCTTCTGGGAAGCTTAATGAATCACATATTAGTAAAGGACTATCTGACAGCCACTGTAGTATGGGTCTAAATCTTGAGTTATGTGCGGGTTCCTTTTTGTCAGTTGACACGAATAGTACTGGAACTGAACACCAAGACATTAAAGATGTGAAGCAGCTTAATCCTTCAGAACAACATTTGCCAAAAGCTGACAGGATTGTACCGGATGCTAGTTCAAATGCTCCTGATGTGATTGGTGGAAAGAGAAAACACACAGATTGCAGTGATGGCGTTAGTGCTGATGAAAGAGATACAAACCCTAAGATTAAAAACAGAGTTGCTGTAAAGAAAATCAGAGATGGGGAGAAGATTCAACAGATTGCTTTGAAGGACCAAGCCAAAGCATGTGTTTCAAACTCTGGAAATGGCTCCAGCCTGACTGTAGTTCCCAAAGATAGCGAGCTAAAGTGTCATCCAGTTCTGAACCCTACTTCTGAAATATTGAGCATTGTTCGAACTACGAACCGTAAGTCATCCAAGGGGCTTGCAGGCTCTAGTTCTGTTATACAATCATCAGAAGAACAGGATTCAATGGCTAGTTTGAGAGTTAAAAAGATAATGAGGAGAGATGCTGAGGACAAGGAATCATCTGTGGTTGTTCAGAGACTAAAAAAGGAAATAAGAGAAGCTGTCCGCAACAAATCTTCAAAAGATATTGGTGAAAACCAGTTTGATCCAAAGCTTCTTGACGCCTTTAGGGCGGCTTTAGCCGGATCAAAAACTGAACCTGTAGAGAAGCTATCAAATTCAGCACTGAAGGCAAGGAAGGCAATGTTGGAGAAGGGAAAAGTACGTGAGAATTTAACGAAGAAAATCTATGGGACATCTAATGGAAAAAGAAAACGTGCATGGGACCGGGACTGTCAAATTGAATTTTGGAAGCATCGTTGCATTGGAGAACCTGAAAAGATTAAGACTTTAAAGTCGGTGCTCGGCCTTCTCAATGGGAGTTCACAGGGTTTGGATGCAAATCATGAGTCTGATACGCATGAGTCCACAAGTCCAATTCTTTCCAGGTTGTATTTAGCGGATACGTCAGTATTTCCCAGGAAAGATAACATTAAGCCTCTTCTAGCTCTTAAAGCTGCTGGTAATTCTGAGCAGAAGGATAAACAACTCACTGCAAAGGAACCGTGTTCAAAGCCTTCTCTTGATAATATTGTACCAACTTCCACAGATTTGAGTAAGGTTTCATCAAAAGTTGGGCTTCCATTATTAGAAACAAATGGGAATAAAAACGTCCCTCCAAGCTCAGACAGTGATGCTGCTTCTAACCAAGTACATAAAGATAGACACTCAGAAGGGTCCTTGGTTTCGTCATCTGGTGGTTCTAAATTGAAAACCAAGAAGGATGTTGTTGATAAAACTGGTGATGTAAAAGTTGATAAAAGGAAATGGGCTTTGGAGGTTCTTGCCAGGAAAATGAGTGGTACAGGCAGGAACACAGCAAATGAAAAACAGGAAGACAACTCGGTGCTCAAAGGAAATTACCCTTTGCTAGCTCAGTTACCAACAGACATGAAACCGGTGTTGTCTCCCAGTCATCACAATAAAATTCCAACGGCAGTGAGGCAGACACAGCTATACCGTATGACAGAGCACTTGCTGAGGAAAGCTAATCTGCCGGTGATTCGTAGAACTGCGGACACGGAATTAGCTGTTGCAGATGCAATTAATATAGAAAAGGAGATTGTGGATAGGTCAAACAGCAAGCTAGTGTATCTGAATCTATGTTCCCAGGAGATACTACATCTTTCGAAAGGTAACAAAGCTAATGGAACCCCAGTTCTTAGTTCCTCCCCATTTTCAGTCCGTGCTGATAGATCAGATGAAGCTGTGCATGAACCTTCAACTGATTCTGTAACTGAAGCAGCACTGAGAAATGCTGGTCTTCTGTCTGATTCTCCTCCAAACAGTCCACATCCCAATATGGAAGTTCCTGCTAAAGAATATGATTCCTCATTAGTTACCAGAGAGGAAGGGCCTGATAATGTATTTGAAATGGATGTAAATCCTGATCTGGACATCTATGGTGATTTTGAGTATAATTTGGAAGATGAAGATTACATTGGTGCCACTGCTACAAAAGTCCCTAACGTGCAACCAGAGGAAGGGGGATCAAAAATAAAAGTTGTTTTCTCTACTTTTCAGCCAGAAATAACAAATCATACTACAGATTTTGGAAGCAGTGAGAAGGTGGTTGACATACAAAAAGATTCTTCCTGTATGCTTGAGAATGATACTTATTCAGGTCTGGAAAATTCAACCAGGGAGTGTGAGACTGACAAGTCTTGTGTTCCTTTGGAATCCATATTCGGTAAAGAAGGTGAAGAGCTTTCTGCTGCAGAATGTGAAGAATTATATGGACCAGACAAAGAACCACTGATCAAGAAATTTCCAGGAGCATCTGAAATTCTATATGGATCACTAGATGCAGGTTTGGTTACAGGCAACAATACAAAAGAGAATGGAAGTTGTCGGCCAAAGCCAACTGAAGAAAGAACATCTCCATCTGGTAATGAGAACCATGCAACAAGTATGACGGTTGCTAGTCTTGGTTGTAATTCCTCTGGAGAAGATTCAGTGAATCATCCCCAACCAGATGGAAGTGGTGAAAGGAACAAGAATTCCAATACGGATGCTAAAGACCAGTCTAACAACATCAATTCTATATTCAAGAAGGTTGAAGCCTACATCAAAGAGCACATCAGACCACTATGCAAGAGCGGTGTGATTACAACTGAACAATATAAGTGGGCTGTGGCGAAAACAACTGATAAAGTCATGAAATACCATTCTAAAGCCAAGAGCGCAAGTTTCTTAATCAAAGAAGGTGAGAAGGTGAAGAAACTTGCAGAGCAGTATGTGGAGACATCCCAAAAAAAGGAGAAAGGTGACGCCTTATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1309

Amino Acids

143.01

Weight (kDa)

5.21

Isoelectric Point (pI)

40.99

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-RING_2 PF13639 35 - 75 9.5e-07 Ring finger domain
PHD PF00628 148 - 185 1.4e-07 PHD-finger
PHD_2 PF13831 154 - 186 1e-05 PHD-finger
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 3925
AasI GACNNNNNNGTC 2 cut(s) 1942, 3307
Acc36I ACCTGC 1 cut(s) 3446
AccB1I GGYRCC 1 cut(s) 3092
AccB7I CCANNNNNTGG 1 cut(s) 808
AccBSI CCGCTC 1 cut(s) 3747
AciI CCGC 8 cut(s) 108, 215, 1067, 1654, 1721, 2048, 2663, 3747
AclWI GGATC 7 cut(s) 287, 427, 506, 1688, 1741, 3145, 3451
AcoI YGGCCR 2 cut(s) 604, 3500
AcuI CTGAAG 7 cut(s) 804, 813, 871, 1131, 1796, 2907, 3534
AcyI GRCGYC 3 cut(s) 972, 1710, 3918
AfaI GTAC 9 cut(s) 535, 591, 934, 1099, 1182, 1812, 2184, 2301, 2452
AfiI CCNNNNNNNGG 3 cut(s) 808, 3131, 3904
AflIII ACRYGT 1 cut(s) 245
AgeI ACCGGT 1 cut(s) 2545
AjnI CCWGG 6 cut(s) 2033, 2066, 2435, 2757, 3287, 3418
AjuI GAANNNNNNNTTGG 8 cut(s) 68, 100, 1778, 1810, 2405, 2437, 3072, 3104
AloI GAACNNNNNNTCC 4 cut(s) 2790, 2822, 3632, 3664
Alw21I GWGCWC 4 cut(s) 1953, 2499, 2622, 3726
Alw26I GTCTC 6 cut(s) 349, 709, 1618, 2559, 3293, 3884
AlwI GGATC 7 cut(s) 287, 427, 506, 1688, 1741, 3145, 3451
AlwNI CAGNNNCTG 2 cut(s) 791, 1035
AoxI GGCC 5 cut(s) 596, 604, 1954, 3002, 3500
ApeKI GCWGC 7 cut(s) 153, 919, 1135, 2105, 2285, 2891, 3362
ArsI GACNNNNNNTTYG 6 cut(s) 29, 61, 1475, 1507, 1982, 2014
AseI ATTAAT 1 cut(s) 2694
AsiGI ACCGGT 1 cut(s) 2545
AspLEI GCGC 1 cut(s) 3833
AspS9I GGNCC 6 cut(s) 597, 1351, 1873, 2325, 3002, 3386
AsuC2I CCSGG 1 cut(s) 1877
AsuII TTCGAA 3 cut(s) 412, 1474, 2777
AsuNHI GCTAGC 1 cut(s) 2518
AvaII GGWCC 4 cut(s) 1351, 1873, 2325, 3386
BaeI ACNNNNGTAYC 2 cut(s) 2043, 2076
BanI GGYRCC 1 cut(s) 3092
BbsI GAAGAC 2 cut(s) 2490, 2903
Bbv12I GWGCWC 4 cut(s) 1953, 2499, 2622, 3726
BbvCI CCTCAGC 2 cut(s) 1593, 2627
BbvI GCAGC 7 cut(s) 140, 931, 1147, 2092, 2272, 2903, 3349
BceAI ACGGC 2 cut(s) 619, 2598
BciT130I CCWGG 6 cut(s) 2035, 2068, 2437, 2759, 3289, 3420
BciVI GTATCC 4 cut(s) 115, 637, 673, 2044
BclI TGATCA 2 cut(s) 240, 3405
BcnI CCSGG 1 cut(s) 1877
BcoDI GTCTC 6 cut(s) 349, 709, 1618, 2559, 3293, 3884
BfaI CTAG 8 cut(s) 1191, 1515, 1557, 2093, 2519, 2735, 3449, 3570
BfmI CTRYAG 5 cut(s) 1036, 1401, 1749, 3192, 3363
BfuAI ACCTGC 1 cut(s) 3446
BfuI GTATCC 4 cut(s) 115, 637, 673, 2044
BglI GCCNNNNNGGC 1 cut(s) 1718
BisI GCNGC 8 cut(s) 154, 920, 1136, 1722, 2106, 2286, 2892, 3363
BlsI GCNGC 8 cut(s) 155, 921, 1137, 1723, 2107, 2287, 2893, 3364
BmcAI AGTACT 2 cut(s) 934, 1099
Bme1390I CCNGG 7 cut(s) 1877, 2035, 2068, 2437, 2759, 3289, 3420
Bme18I GGWCC 4 cut(s) 1351, 1873, 2325, 3386
BmgT120I GGNCC 6 cut(s) 597, 1351, 1873, 2325, 3002, 3386
BmiI GGNNCC 8 cut(s) 846, 1072, 1390, 1874, 2151, 2326, 2800, 3094
BmrFI CCNGG 7 cut(s) 1877, 2035, 2068, 2437, 2759, 3289, 3420
BmrI ACTGGG 2 cut(s) 2553, 2798
BmsI GCATC 9 cut(s) 1177, 1579, 1912, 1975, 2272, 2677, 3434, 3442, 3649
BmtI GCTAGC 1 cut(s) 2522
BmuI ACTGGG 2 cut(s) 2553, 2798
BpiI GAAGAC 2 cut(s) 2490, 2903
BpmI CTGGAG 2 cut(s) 1375, 3612
Bpu10I CCTNAGC 2 cut(s) 1593, 2627
Bpu14I TTCGAA 3 cut(s) 412, 1474, 2777
BpuEI CTTGAG 2 cut(s) 1076, 3272
BpuMI CCSGG 1 cut(s) 1877
Bsa29I ATCGAT 1 cut(s) 132
BsaAI YACGTR 2 cut(s) 537, 1814
BsaBI GATNNNNATC 4 cut(s) 291, 444, 1989, 3030
BsaHI GRCGYC 3 cut(s) 972, 1710, 3918
BsaJI CCNNGG 5 cut(s) 1497, 2066, 2328, 2757, 3288
BsaWI WCCGGW 4 cut(s) 253, 841, 1183, 2545
Bsc4I CCNNNNNNNGG 3 cut(s) 808, 3131, 3904
Bse118I RCCGGY 2 cut(s) 2545, 2644
Bse3DI GCAATG 2 cut(s) 76, 1797
Bse8I GATNNNNATC 4 cut(s) 291, 444, 1989, 3030
BseBI CCWGG 6 cut(s) 2035, 2068, 2437, 2759, 3289, 3420
BseCI ATCGAT 1 cut(s) 132
BseDI CCNNGG 5 cut(s) 1497, 2066, 2328, 2757, 3288
BseJI GATNNNNATC 4 cut(s) 291, 444, 1989, 3030
BseLI CCNNNNNNNGG 3 cut(s) 808, 3131, 3904
BseMI GCAATG 2 cut(s) 76, 1797
BseRI GAGGAG 3 cut(s) 449, 1597, 2916
BseXI GCAGC 7 cut(s) 140, 931, 1147, 2092, 2272, 2903, 3349
BshFI GGCC 5 cut(s) 598, 606, 1956, 3004, 3502
BshNI GGYRCC 1 cut(s) 3092
BshTI ACCGGT 1 cut(s) 2545
BshVI ATCGAT 1 cut(s) 132
BsiHKAI GWGCWC 4 cut(s) 1953, 2499, 2622, 3726
BsiSI CCGG 7 cut(s) 254, 842, 1184, 1731, 1876, 2546, 2645
BslFI GGGAC 7 cut(s) 343, 850, 1855, 1886, 1892, 2246, 3095
BslI CCNNNNNNNGG 3 cut(s) 808, 3131, 3904
BsmAI GTCTC 6 cut(s) 349, 709, 1618, 2559, 3293, 3884
BsmFI GGGAC 7 cut(s) 343, 850, 1855, 1886, 1892, 2246, 3095
BsnI GGCC 5 cut(s) 598, 606, 1956, 3004, 3502
Bsp119I TTCGAA 3 cut(s) 412, 1474, 2777
Bsp1286I GDGCHC 4 cut(s) 1953, 2499, 2622, 3726
BspACI CCGC 8 cut(s) 108, 215, 1067, 1654, 1721, 2048, 2663, 3747
BspANI GGCC 5 cut(s) 598, 606, 1956, 3004, 3502
BspDI ATCGAT 1 cut(s) 132
BspHI TCATGA 2 cut(s) 1993, 3804
BspLI GGNNCC 8 cut(s) 846, 1072, 1390, 1874, 2151, 2326, 2800, 3094
BspMAI CTGCAG 1 cut(s) 3367
BspMI ACCTGC 1 cut(s) 3446
BspOI GCTAGC 1 cut(s) 2522
BspPI GGATC 7 cut(s) 287, 427, 506, 1688, 1741, 3145, 3451
BspQI GCTCTTC 1 cut(s) 3345
BspT104I TTCGAA 3 cut(s) 412, 1474, 2777
BspT107I GGYRCC 1 cut(s) 3092
BsrBI CCGCTC 1 cut(s) 3747
BsrDI GCAATG 2 cut(s) 76, 1797
BsrFI RCCGGY 2 cut(s) 2545, 2644
BssAI RCCGGY 2 cut(s) 2545, 2644
BssECI CCNNGG 5 cut(s) 1497, 2066, 2328, 2757, 3288
BssNI GRCGYC 3 cut(s) 972, 1710, 3918
BssT1I CCWWGG 2 cut(s) 1497, 2328
Bst2UI CCWGG 6 cut(s) 2035, 2068, 2437, 2759, 3289, 3420
Bst6I CTCTTC 2 cut(s) 2094, 3345
BstACI GRCGYC 3 cut(s) 972, 1710, 3918
BstBAI YACGTR 2 cut(s) 537, 1814
BstBI TTCGAA 3 cut(s) 412, 1474, 2777
BstC8I GCNNGC 7 cut(s) 158, 178, 1421, 1506, 1510, 2520, 2732
BstHHI GCGC 1 cut(s) 3833
BstMAI GTCTC 6 cut(s) 349, 709, 1618, 2559, 3293, 3884
BstNI CCWGG 6 cut(s) 2035, 2068, 2437, 2759, 3289, 3420
BstNSI RCATGY 4 cut(s) 180, 249, 905, 1368
BstSCI CCNGG 7 cut(s) 1875, 2033, 2066, 2435, 2757, 3287, 3418
BstSFI CTRYAG 5 cut(s) 1036, 1401, 1749, 3192, 3363
BstV1I GCAGC 7 cut(s) 140, 931, 1147, 2092, 2272, 2903, 3349
BstV2I GAAGAC 2 cut(s) 2490, 2903
BstXI CCANNNNNNTGG 1 cut(s) 3623
Bsu15I ATCGAT 1 cut(s) 132
BsuI GTATCC 4 cut(s) 115, 637, 673, 2044
BsuRI GGCC 5 cut(s) 598, 606, 1956, 3004, 3502
BsuTUI ATCGAT 1 cut(s) 132
BtsI GCAGTG 5 cut(s) 1249, 2139, 2592, 3096, 3214
BveI ACCTGC 1 cut(s) 3446
Cac8I GCNNGC 7 cut(s) 158, 178, 1421, 1506, 1510, 2520, 2732
CaiI CAGNNNCTG 2 cut(s) 791, 1035
CciI TCATGA 2 cut(s) 1993, 3804
CfoI GCGC 1 cut(s) 3833
Cfr10I RCCGGY 2 cut(s) 2545, 2644
Cfr13I GGNCC 6 cut(s) 597, 1351, 1873, 2325, 3002, 3386
ClaI ATCGAT 1 cut(s) 132
CseI GACGC 4 cut(s) 50, 593, 961, 1718
Csp6I GTAC 9 cut(s) 534, 590, 933, 1098, 1181, 1811, 2183, 2300, 2451
CspAI ACCGGT 1 cut(s) 2545
CspCI CAANNNNNGTGG 2 cut(s) 3755, 3790
CviQI GTAC 9 cut(s) 534, 590, 933, 1098, 1181, 1811, 2183, 2300, 2451
DraI TTTAAA 1 cut(s) 1941
DrdI GACNNNNNNGTC 2 cut(s) 1942, 3307
DseDI GACNNNNNNGTC 2 cut(s) 1942, 3307
EaeI YGGCCR 2 cut(s) 604, 3500
Eam1104I CTCTTC 2 cut(s) 2094, 3345
EarI CTCTTC 2 cut(s) 2094, 3345
Eco130I CCWWGG 2 cut(s) 1497, 2328
Eco47I GGWCC 4 cut(s) 1351, 1873, 2325, 3386
Eco57I CTGAAG 7 cut(s) 804, 813, 871, 1131, 1796, 2907, 3534
EcoO109I RGGNCCY 2 cut(s) 2325, 3002
EcoRI GAATTC 1 cut(s) 3646
EcoRII CCWGG 6 cut(s) 2033, 2066, 2435, 2757, 3287, 3418
EcoT14I CCWWGG 2 cut(s) 1497, 2328
EcoT22I ATGCAT 2 cut(s) 119, 182
ErhI CCWWGG 2 cut(s) 1497, 2328
FalI AAGNNNNNCTT 2 cut(s) 2211, 2243
FaqI GGGAC 7 cut(s) 343, 850, 1855, 1886, 1892, 2246, 3095
FauI CCCGC 2 cut(s) 101, 1060
FbaI TGATCA 2 cut(s) 240, 3405
Fnu4HI GCNGC 8 cut(s) 154, 920, 1136, 1722, 2106, 2286, 2892, 3363
Fsp4HI GCNGC 8 cut(s) 154, 920, 1136, 1722, 2106, 2286, 2892, 3363
FspBI CTAG 8 cut(s) 1191, 1515, 1557, 2093, 2519, 2735, 3449, 3570
GlaI GCGC 1 cut(s) 3832
GluI GCNGC 8 cut(s) 154, 920, 1136, 1722, 2106, 2286, 2892, 3363
GsuI CTGGAG 2 cut(s) 1375, 3612
HaeIII GGCC 5 cut(s) 598, 606, 1956, 3004, 3502
HapII CCGG 7 cut(s) 254, 842, 1184, 1731, 1876, 2546, 2645
HgaI GACGC 4 cut(s) 50, 593, 961, 1718
HhaI GCGC 1 cut(s) 3833
Hin1I GRCGYC 3 cut(s) 972, 1710, 3918
Hin6I GCGC 1 cut(s) 3831
HinP1I GCGC 1 cut(s) 3831
HincII GTYRAC 2 cut(s) 1087, 3223
HindII GTYRAC 2 cut(s) 1087, 3223
HindIII AAGCTT 3 cut(s) 961, 992, 1700
HpaII CCGG 7 cut(s) 254, 842, 1184, 1731, 1876, 2546, 2645
Hpy166II GTNNAC 7 cut(s) 26, 893, 1087, 1973, 2016, 2939, 3223
Hpy8I GTNNAC 7 cut(s) 26, 893, 1087, 1973, 2016, 2939, 3223
Hpy99I CGWCG 4 cut(s) 41, 44, 587, 605
HpyCH4IV ACGT 7 cut(s) 104, 536, 1813, 1864, 2054, 2259, 3117
HpySE526I ACGT 7 cut(s) 104, 536, 1813, 1864, 2054, 2259, 3117
Hsp92I GRCGYC 3 cut(s) 972, 1710, 3918
HspAI GCGC 1 cut(s) 3831
Ksp22I TGATCA 2 cut(s) 240, 3405
LguI GCTCTTC 1 cut(s) 3345
LmnI GCTCC 4 cut(s) 273, 1207, 1394, 3422
Lsp1109I GCAGC 7 cut(s) 140, 931, 1147, 2092, 2272, 2903, 3349
LweI GCATC 9 cut(s) 1177, 1579, 1912, 1975, 2272, 2677, 3434, 3442, 3649
MaeI CTAG 8 cut(s) 1191, 1515, 1557, 2093, 2519, 2735, 3449, 3570
MaeII ACGT 7 cut(s) 104, 536, 1813, 1864, 2054, 2259, 3117
MaeIII GTNAC 8 cut(s) 570, 686, 2526, 2783, 2881, 2986, 3463, 3914
MbiI CCGCTC 1 cut(s) 3747
MfeI CAATTG 2 cut(s) 187, 459
MhlI GDGCHC 4 cut(s) 1953, 2499, 2622, 3726
MlyI GAGTC 3 cut(s) 21, 2006, 2021
MmeI TCCRAC 5 cut(s) 606, 694, 789, 1776, 2603
Mph1103I ATGCAT 2 cut(s) 119, 182
MspI CCGG 7 cut(s) 254, 842, 1184, 1731, 1876, 2546, 2645
MspR9I CCNGG 7 cut(s) 1877, 2035, 2068, 2437, 2759, 3289, 3420
MunI CAATTG 2 cut(s) 187, 459
MvaI CCWGG 6 cut(s) 2035, 2068, 2437, 2759, 3289, 3420
NciI CCSGG 1 cut(s) 1877
NheI GCTAGC 1 cut(s) 2518
NlaIV GGNNCC 8 cut(s) 846, 1072, 1390, 1874, 2151, 2326, 2800, 3094
NmeAIII GCCGAG 1 cut(s) 1932
NmuCI GTSAC 3 cut(s) 570, 686, 3914
NsiI ATGCAT 2 cut(s) 119, 182
NspI RCATGY 4 cut(s) 180, 249, 905, 1368
NspV TTCGAA 3 cut(s) 412, 1474, 2777
PaeI GCATGC 1 cut(s) 180
PagI TCATGA 2 cut(s) 1993, 3804
PciI ACATGT 1 cut(s) 245
PciSI GCTCTTC 1 cut(s) 3345
PflMI CCANNNNNTGG 1 cut(s) 808
PfoI TCCNGGA 1 cut(s) 3418
PinAI ACCGGT 1 cut(s) 2545
PkrI GCNGC 8 cut(s) 155, 921, 1137, 1723, 2107, 2287, 2893, 3364
PleI GAGTC 3 cut(s) 21, 2005, 2020
PpsI GAGTC 3 cut(s) 21, 2005, 2020
Ppu21I YACGTR 2 cut(s) 537, 1814
PpuMI RGGWCCY 1 cut(s) 2325
PscI ACATGT 1 cut(s) 245
PshBI ATTAAT 1 cut(s) 2694
PsiI TTATAA 1 cut(s) 3925
Psp5II RGGWCCY 1 cut(s) 2325
Psp6I CCWGG 6 cut(s) 2033, 2066, 2435, 2757, 3287, 3418
PspGI CCWGG 6 cut(s) 2033, 2066, 2435, 2757, 3287, 3418
PspN4I GGNNCC 8 cut(s) 846, 1072, 1390, 1874, 2151, 2326, 2800, 3094
PspPI GGNCC 6 cut(s) 597, 1351, 1873, 2325, 3002, 3386
PspPPI RGGWCCY 1 cut(s) 2325
PstI CTGCAG 1 cut(s) 3367
PstNI CAGNNNCTG 2 cut(s) 791, 1035
RsaI GTAC 9 cut(s) 535, 591, 934, 1099, 1182, 1812, 2184, 2301, 2452
RsaNI GTAC 9 cut(s) 534, 590, 933, 1098, 1181, 1811, 2183, 2300, 2451
SapI GCTCTTC 1 cut(s) 3345
SatI GCNGC 8 cut(s) 154, 920, 1136, 1722, 2106, 2286, 2892, 3363
Sau96I GGNCC 6 cut(s) 597, 1351, 1873, 2325, 3002, 3386
ScaI AGTACT 2 cut(s) 934, 1099
SchI GAGTC 3 cut(s) 21, 2006, 2021
ScrFI CCNGG 7 cut(s) 1877, 2035, 2068, 2437, 2759, 3289, 3420
SduI GDGCHC 4 cut(s) 1953, 2499, 2622, 3726
SfaNI GCATC 9 cut(s) 1177, 1579, 1912, 1975, 2272, 2677, 3434, 3442, 3649
SfcI CTRYAG 5 cut(s) 1036, 1401, 1749, 3192, 3363
SfuI TTCGAA 3 cut(s) 412, 1474, 2777
SinI GGWCC 4 cut(s) 1351, 1873, 2325, 3386
SmlI CTYRAG 2 cut(s) 1055, 3251
SmoI CTYRAG 2 cut(s) 1055, 3251
SphI GCATGC 1 cut(s) 180
SsiI CCGC 8 cut(s) 108, 215, 1067, 1654, 1721, 2048, 2663, 3747
SspI AATATT 2 cut(s) 1461, 2179
SspMI CTAG 8 cut(s) 1191, 1515, 1557, 2093, 2519, 2735, 3449, 3570
StyD4I CCNGG 7 cut(s) 1875, 2033, 2066, 2435, 2757, 3287, 3418
StyI CCWWGG 2 cut(s) 1497, 2328
TaiI ACGT 7 cut(s) 107, 539, 1816, 1867, 2057, 2262, 3120
TaqI TCGA 6 cut(s) 132, 412, 747, 929, 1474, 2777
TatI WGTACW 4 cut(s) 589, 932, 1097, 2299
TauI GCSGC 1 cut(s) 1724
TseFI GTSAC 3 cut(s) 570, 686, 3914
TseI GCWGC 7 cut(s) 153, 919, 1135, 2105, 2285, 2891, 3362
Tsp45I GTSAC 3 cut(s) 570, 686, 3914
TspGWI ACGGA 3 cut(s) 2684, 2822, 3671
Van91I CCANNNNNTGG 1 cut(s) 808
VpaK11BI GGWCC 4 cut(s) 1351, 1873, 2325, 3386
VspI ATTAAT 1 cut(s) 2694
XceI RCATGY 4 cut(s) 180, 249, 905, 1368
XspI CTAG 8 cut(s) 1191, 1515, 1557, 2093, 2519, 2735, 3449, 3570
ZrmI AGTACT 2 cut(s) 934, 1099
Zsp2I ATGCAT 2 cut(s) 119, 182
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.