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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G10930 AT4G10930 |
| fragaria_vesca | FvH4_5g04850 FvH4_5g04850 FvH4_5g04850 |
| malus_domestica | MD06G1109300.v1.1 MD12G1080900.v1.1 MD14G1130300.v1.1 |
| prunus_persica | Prupe.5G122300_v2.0.a1 Prupe.5G122300_v2.0.a1 Prupe.5G122300_v2.0.a1 |
| pyrus_communis | pycom06g10260 pycom06g10270 pycom06g10280 |
| rosa_chinensis | RchiOBHm_Chr7g0194241 |
| rosa_laevigata | RLG00000004207 |
| rosa_multiflora | Rmu_co8489007.1_g000001 Rmu_sc0000901.1_g000004 Rmu_sc0009433.1_g000017 |
| rosa_roxburghii | Rroxscaffold_3G00261470 |
| rosa_rugosa | Rorug07G0014700 |
| rosa_samantha | Rh7AG142000 Rh7BG142400 Rh7CG146100 Rh7DG143400 |
| rosa_wichuraiana | Rw7G012140 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AanI | TTATAA | 1 cut(s) | 3922 |
| AasI | GACNNNNNNGTC | 1 cut(s) | 1939 |
| Acc36I | ACCTGC | 1 cut(s) | 3440 |
| Acc65I | GGTACC | 1 cut(s) | 486 |
| AccB1I | GGYRCC | 2 cut(s) | 486, 3086 |
| AccB7I | CCANNNNNTGG | 1 cut(s) | 814 |
| AccBSI | CCGCTC | 1 cut(s) | 3744 |
| AccII | CGCG | 1 cut(s) | 1812 |
| AciI | CCGC | 4 cut(s) | 1651, 2136, 2708, 3744 |
| AclI | AACGTT | 1 cut(s) | 750 |
| AclWI | GGATC | 9 cut(s) | 287, 427, 506, 1685, 1738, 2249, 2864, 2963, 3445 |
| AcoI | YGGCCR | 1 cut(s) | 610 |
| AcsI | RAATTY | 7 cut(s) | 10, 27, 230, 1816, 1889, 3274, 3407 |
| AfiI | CCNNNNNNNGG | 3 cut(s) | 814, 3125, 3901 |
| AflII | CTTAAG | 2 cut(s) | 929, 1286 |
| AflIII | ACRYGT | 2 cut(s) | 104, 245 |
| AhdI | GACNNNNNGTC | 1 cut(s) | 1039 |
| AjnI | CCWGG | 4 cut(s) | 2027, 2751, 3281, 3412 |
| AjuI | GAANNNNNNNTTGG | 8 cut(s) | 30, 62, 1775, 1807, 3066, 3098, 3312, 3344 |
| Alw21I | GWGCWC | 2 cut(s) | 2493, 2616 |
| Alw26I | GTCTC | 7 cut(s) | 349, 715, 1615, 1925, 3109, 3287, 3881 |
| AlwI | GGATC | 9 cut(s) | 287, 427, 506, 1685, 1738, 2249, 2864, 2963, 3445 |
| AlwNI | CAGNNNCTG | 2 cut(s) | 797, 1379 |
| Ama87I | CYCGRG | 1 cut(s) | 3245 |
| AoxI | GGCC | 5 cut(s) | 610, 976, 1510, 1951, 2996 |
| ApeKI | GCWGC | 5 cut(s) | 153, 925, 1135, 1718, 2593 |
| ApoI | RAATTY | 7 cut(s) | 10, 27, 230, 1816, 1889, 3274, 3407 |
| ArsI | GACNNNNNNTTYG | 6 cut(s) | 1475, 1507, 1979, 2011, 3653, 3685 |
| AseI | ATTAAT | 1 cut(s) | 2688 |
| Asp718I | GGTACC | 1 cut(s) | 486 |
| AspLEI | GCGC | 1 cut(s) | 3830 |
| AspS9I | GGNCC | 7 cut(s) | 1351, 1511, 1870, 2319, 2996, 3380, 3494 |
| AsuC2I | CCSGG | 2 cut(s) | 1874, 2431 |
| AsuII | TTCGAA | 2 cut(s) | 412, 1474 |
| AsuNHI | GCTAGC | 1 cut(s) | 2512 |
| AvaI | CYCGRG | 1 cut(s) | 3245 |
| AvaII | GGWCC | 5 cut(s) | 1351, 1870, 2319, 3380, 3494 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 2037, 2070 |
| BanI | GGYRCC | 2 cut(s) | 486, 3086 |
| BanII | GRGCYC | 1 cut(s) | 2416 |
| BauI | CACGAG | 1 cut(s) | 809 |
| BbsI | GAAGAC | 4 cut(s) | 1485, 1858, 2897, 3081 |
| Bbv12I | GWGCWC | 2 cut(s) | 2493, 2616 |
| BbvCI | CCTCAGC | 2 cut(s) | 1590, 2621 |
| BbvI | GCAGC | 5 cut(s) | 140, 937, 1147, 1730, 2605 |
| BceAI | ACGGC | 1 cut(s) | 625 |
| BciT130I | CCWGG | 4 cut(s) | 2029, 2753, 3283, 3414 |
| BciVI | GTATCC | 2 cut(s) | 115, 643 |
| BclI | TGATCA | 2 cut(s) | 240, 3399 |
| BcnI | CCSGG | 2 cut(s) | 1874, 2431 |
| BcoDI | GTCTC | 7 cut(s) | 349, 715, 1615, 1925, 3109, 3287, 3881 |
| BfaI | CTAG | 8 cut(s) | 1191, 1554, 1724, 2087, 2513, 2729, 2787, 3564 |
| BfmI | CTRYAG | 1 cut(s) | 1401 |
| BfrI | CTTAAG | 2 cut(s) | 929, 1286 |
| BfuAI | ACCTGC | 1 cut(s) | 3440 |
| BfuI | GTATCC | 2 cut(s) | 115, 643 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1715 |
| BglII | AGATCT | 4 cut(s) | 1126, 2800, 3031, 3190 |
| BisI | GCNGC | 5 cut(s) | 154, 926, 1136, 1719, 2594 |
| BlsI | GCNGC | 5 cut(s) | 155, 927, 1137, 1720, 2595 |
| BmcAI | AGTACT | 2 cut(s) | 940, 3202 |
| Bme1390I | CCNGG | 6 cut(s) | 1874, 2029, 2431, 2753, 3283, 3414 |
| Bme18I | GGWCC | 5 cut(s) | 1351, 1870, 2319, 3380, 3494 |
| BmeRI | GACNNNNNGTC | 1 cut(s) | 1039 |
| BmeT110I | CYCGRG | 1 cut(s) | 3245 |
| BmgT120I | GGNCC | 7 cut(s) | 1351, 1511, 1870, 2319, 2996, 3380, 3494 |
| BmiI | GGNNCC | 7 cut(s) | 488, 1390, 1871, 2223, 2320, 2794, 3088 |
| BmrFI | CCNGG | 6 cut(s) | 1874, 2029, 2431, 2753, 3283, 3414 |
| BmrI | ACTGGG | 1 cut(s) | 2547 |
| BmtI | GCTAGC | 1 cut(s) | 2516 |
| BmuI | ACTGGG | 1 cut(s) | 2547 |
| BoxI | GACNNNNGTC | 1 cut(s) | 2274 |
| BpiI | GAAGAC | 4 cut(s) | 1485, 1858, 2897, 3081 |
| BpmI | CTGGAG | 2 cut(s) | 1375, 2438 |
| Bpu10I | CCTNAGC | 3 cut(s) | 1281, 1590, 2621 |
| Bpu14I | TTCGAA | 2 cut(s) | 412, 1474 |
| BpuMI | CCSGG | 2 cut(s) | 1874, 2431 |
| Bsa29I | ATCGAT | 1 cut(s) | 132 |
| BsaBI | GATNNNNATC | 4 cut(s) | 291, 444, 1986, 3024 |
| BsaJI | CCNNGG | 6 cut(s) | 1347, 1497, 2060, 2322, 2751, 3282 |
| BsaWI | WCCGGW | 3 cut(s) | 253, 1100, 1183 |
| Bsc4I | CCNNNNNNNGG | 3 cut(s) | 814, 3125, 3901 |
| Bse118I | RCCGGY | 1 cut(s) | 2638 |
| Bse3DI | GCAATG | 1 cut(s) | 2145 |
| Bse8I | GATNNNNATC | 4 cut(s) | 291, 444, 1986, 3024 |
| BseBI | CCWGG | 4 cut(s) | 2029, 2753, 3283, 3414 |
| BseCI | ATCGAT | 1 cut(s) | 132 |
| BseDI | CCNNGG | 6 cut(s) | 1347, 1497, 2060, 2322, 2751, 3282 |
| BseGI | GGATG | 8 cut(s) | 292, 397, 1192, 1432, 1841, 2371, 3025, 3890 |
| BseJI | GATNNNNATC | 4 cut(s) | 291, 444, 1986, 3024 |
| BseLI | CCNNNNNNNGG | 3 cut(s) | 814, 3125, 3901 |
| BseMI | GCAATG | 1 cut(s) | 2145 |
| BseRI | GAGGAG | 3 cut(s) | 449, 1594, 2910 |
| BseXI | GCAGC | 5 cut(s) | 140, 937, 1147, 1730, 2605 |
| Bsh1236I | CGCG | 1 cut(s) | 1812 |
| BshFI | GGCC | 5 cut(s) | 612, 978, 1512, 1953, 2998 |
| BshNI | GGYRCC | 2 cut(s) | 486, 3086 |
| BshVI | ATCGAT | 1 cut(s) | 132 |
| BsiHKAI | GWGCWC | 2 cut(s) | 2493, 2616 |
| BsiHKCI | CYCGRG | 1 cut(s) | 3245 |
| BsiSI | CCGG | 6 cut(s) | 254, 1101, 1184, 1873, 2431, 2639 |
| BslFI | GGGAC | 4 cut(s) | 343, 856, 1883, 1889 |
| BslI | CCNNNNNNNGG | 3 cut(s) | 814, 3125, 3901 |
| BsmAI | GTCTC | 7 cut(s) | 349, 715, 1615, 1925, 3109, 3287, 3881 |
| BsmFI | GGGAC | 4 cut(s) | 343, 856, 1883, 1889 |
| BsnI | GGCC | 5 cut(s) | 612, 978, 1512, 1953, 2998 |
| BsoBI | CYCGRG | 1 cut(s) | 3245 |
| Bsp119I | TTCGAA | 2 cut(s) | 412, 1474 |
| Bsp1286I | GDGCHC | 3 cut(s) | 2416, 2493, 2616 |
| Bsp1407I | TGTACA | 1 cut(s) | 3112 |
| BspACI | CCGC | 4 cut(s) | 1651, 2136, 2708, 3744 |
| BspANI | GGCC | 5 cut(s) | 612, 978, 1512, 1953, 2998 |
| BspDI | ATCGAT | 1 cut(s) | 132 |
| BspFNI | CGCG | 1 cut(s) | 1812 |
| BspHI | TCATGA | 2 cut(s) | 1990, 3801 |
| BspLI | GGNNCC | 7 cut(s) | 488, 1390, 1871, 2223, 2320, 2794, 3088 |
| BspMI | ACCTGC | 1 cut(s) | 3440 |
| BspOI | GCTAGC | 1 cut(s) | 2516 |
| BspPI | GGATC | 9 cut(s) | 287, 427, 506, 1685, 1738, 2249, 2864, 2963, 3445 |
| BspQI | GCTCTTC | 1 cut(s) | 3339 |
| BspT104I | TTCGAA | 2 cut(s) | 412, 1474 |
| BspT107I | GGYRCC | 2 cut(s) | 486, 3086 |
| BspTI | CTTAAG | 2 cut(s) | 929, 1286 |
| BsrBI | CCGCTC | 1 cut(s) | 3744 |
| BsrDI | GCAATG | 1 cut(s) | 2145 |
| BsrFI | RCCGGY | 1 cut(s) | 2638 |
| BsrGI | TGTACA | 1 cut(s) | 3112 |
| BssAI | RCCGGY | 1 cut(s) | 2638 |
| BssECI | CCNNGG | 6 cut(s) | 1347, 1497, 2060, 2322, 2751, 3282 |
| BssSI | CACGAG | 1 cut(s) | 809 |
| BssT1I | CCWWGG | 4 cut(s) | 1347, 1497, 2060, 2322 |
| Bst2BI | CACGAG | 1 cut(s) | 809 |
| Bst2UI | CCWGG | 4 cut(s) | 2029, 2753, 3283, 3414 |
| Bst6I | CTCTTC | 2 cut(s) | 2088, 3339 |
| BstAFI | CTTAAG | 2 cut(s) | 929, 1286 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1239 |
| BstAUI | TGTACA | 1 cut(s) | 3112 |
| BstBI | TTCGAA | 2 cut(s) | 412, 1474 |
| BstC8I | GCNNGC | 7 cut(s) | 158, 178, 1506, 1510, 2514, 2726, 3242 |
| BstEII | GGTNACC | 1 cut(s) | 3911 |
| BstF5I | GGATG | 8 cut(s) | 292, 397, 1192, 1432, 1841, 2371, 3025, 3890 |
| BstFNI | CGCG | 1 cut(s) | 1812 |
| BstHHI | GCGC | 1 cut(s) | 3830 |
| BstMAI | GTCTC | 7 cut(s) | 349, 715, 1615, 1925, 3109, 3287, 3881 |
| BstNI | CCWGG | 4 cut(s) | 2029, 2753, 3283, 3414 |
| BstNSI | RCATGY | 3 cut(s) | 180, 249, 3244 |
| BstPAI | GACNNNNGTC | 1 cut(s) | 2274 |
| BstPI | GGTNACC | 1 cut(s) | 3911 |
| BstSCI | CCNGG | 6 cut(s) | 1872, 2027, 2429, 2751, 3281, 3412 |
| BstSFI | CTRYAG | 1 cut(s) | 1401 |
| BstUI | CGCG | 1 cut(s) | 1812 |
| BstV1I | GCAGC | 5 cut(s) | 140, 937, 1147, 1730, 2605 |
| BstV2I | GAAGAC | 4 cut(s) | 1485, 1858, 2897, 3081 |
| BstX2I | RGATCY | 5 cut(s) | 1126, 1730, 2800, 3031, 3190 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 2140, 3620 |
| BstYI | RGATCY | 5 cut(s) | 1126, 1730, 2800, 3031, 3190 |
| Bsu15I | ATCGAT | 1 cut(s) | 132 |
| BsuI | GTATCC | 2 cut(s) | 115, 643 |
| BsuRI | GGCC | 5 cut(s) | 612, 978, 1512, 1953, 2998 |
| BsuTUI | ATCGAT | 1 cut(s) | 132 |
| BtsCI | GGATG | 8 cut(s) | 292, 397, 1192, 1432, 1841, 2371, 3025, 3890 |
| BtsI | GCAGTG | 2 cut(s) | 1249, 3090 |
| BtsIMutI | CAGTG | 9 cut(s) | 160, 339, 782, 1249, 1769, 2586, 2888, 3090, 3402 |
| BveI | ACCTGC | 1 cut(s) | 3440 |
| Cac8I | GCNNGC | 7 cut(s) | 158, 178, 1506, 1510, 2514, 2726, 3242 |
| CaiI | CAGNNNCTG | 2 cut(s) | 797, 1379 |
| CciI | TCATGA | 2 cut(s) | 1990, 3801 |
| CfoI | GCGC | 1 cut(s) | 3830 |
| Cfr10I | RCCGGY | 1 cut(s) | 2638 |
| Cfr13I | GGNCC | 7 cut(s) | 1351, 1511, 1870, 2319, 2996, 3380, 3494 |
| ClaI | ATCGAT | 1 cut(s) | 132 |
| CspCI | CAANNNNNGTGG | 4 cut(s) | 2770, 2805, 3752, 3787 |
| DraI | TTTAAA | 1 cut(s) | 1938 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 1939 |
| DriI | GACNNNNNGTC | 1 cut(s) | 1039 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 1939 |
| EaeI | YGGCCR | 1 cut(s) | 610 |
| Eam1104I | CTCTTC | 2 cut(s) | 2088, 3339 |
| Eam1105I | GACNNNNNGTC | 1 cut(s) | 1039 |
| EarI | CTCTTC | 2 cut(s) | 2088, 3339 |
| Eco130I | CCWWGG | 4 cut(s) | 1347, 1497, 2060, 2322 |
| Eco24I | GRGCYC | 1 cut(s) | 2416 |
| Eco47I | GGWCC | 5 cut(s) | 1351, 1870, 2319, 3380, 3494 |
| Eco88I | CYCGRG | 1 cut(s) | 3245 |
| Eco91I | GGTNACC | 1 cut(s) | 3911 |
| EcoO109I | RGGNCCY | 3 cut(s) | 1511, 2319, 2996 |
| EcoO65I | GGTNACC | 1 cut(s) | 3911 |
| EcoRI | GAATTC | 1 cut(s) | 27 |
| EcoRII | CCWGG | 4 cut(s) | 2027, 2751, 3281, 3412 |
| EcoT14I | CCWWGG | 4 cut(s) | 1347, 1497, 2060, 2322 |
| EcoT22I | ATGCAT | 1 cut(s) | 182 |
| EcoT38I | GRGCYC | 1 cut(s) | 2416 |
| ErhI | CCWWGG | 4 cut(s) | 1347, 1497, 2060, 2322 |
| FaqI | GGGAC | 4 cut(s) | 343, 856, 1883, 1889 |
| FbaI | TGATCA | 2 cut(s) | 240, 3399 |
| Fnu4HI | GCNGC | 5 cut(s) | 154, 926, 1136, 1719, 2594 |
| FokI | GGATG | 8 cut(s) | 299, 404, 1199, 1419, 1828, 2378, 3032, 3877 |
| FriOI | GRGCYC | 1 cut(s) | 2416 |
| Fsp4HI | GCNGC | 5 cut(s) | 154, 926, 1136, 1719, 2594 |
| FspBI | CTAG | 8 cut(s) | 1191, 1554, 1724, 2087, 2513, 2729, 2787, 3564 |
| GlaI | GCGC | 1 cut(s) | 3829 |
| GluI | GCNGC | 5 cut(s) | 154, 926, 1136, 1719, 2594 |
| GsuI | CTGGAG | 2 cut(s) | 1375, 2438 |
| HaeIII | GGCC | 5 cut(s) | 612, 978, 1512, 1953, 2998 |
| HapII | CCGG | 6 cut(s) | 254, 1101, 1184, 1873, 2431, 2639 |
| HhaI | GCGC | 1 cut(s) | 3830 |
| Hin6I | GCGC | 1 cut(s) | 3828 |
| HinP1I | GCGC | 1 cut(s) | 3828 |
| HincII | GTYRAC | 2 cut(s) | 55, 1087 |
| HindII | GTYRAC | 2 cut(s) | 55, 1087 |
| HindIII | AAGCTT | 3 cut(s) | 998, 1283, 1697 |
| HpaI | GTTAAC | 1 cut(s) | 55 |
| HpaII | CCGG | 6 cut(s) | 254, 1101, 1184, 1873, 2431, 2639 |
| Hpy166II | GTNNAC | 7 cut(s) | 55, 899, 1087, 1970, 2010, 2933, 3494 |
| Hpy8I | GTNNAC | 7 cut(s) | 55, 899, 1087, 1970, 2010, 2933, 3494 |
| HpyCH4IV | ACGT | 5 cut(s) | 104, 750, 1861, 2048, 2935 |
| HpySE526I | ACGT | 5 cut(s) | 104, 750, 1861, 2048, 2935 |
| HspAI | GCGC | 1 cut(s) | 3828 |
| KpnI | GGTACC | 1 cut(s) | 490 |
| Ksp22I | TGATCA | 2 cut(s) | 240, 3399 |
| KspAI | GTTAAC | 1 cut(s) | 55 |
| LguI | GCTCTTC | 1 cut(s) | 3339 |
| LmnI | GCTCC | 4 cut(s) | 273, 1207, 1394, 3416 |
| Lsp1109I | GCAGC | 5 cut(s) | 140, 937, 1147, 1730, 2605 |
| MaeI | CTAG | 8 cut(s) | 1191, 1554, 1724, 2087, 2513, 2729, 2787, 3564 |
| MaeII | ACGT | 5 cut(s) | 104, 750, 1861, 2048, 2935 |
| MaeIII | GTNAC | 7 cut(s) | 692, 2173, 2520, 2558, 2777, 2875, 3911 |
| MbiI | CCGCTC | 1 cut(s) | 3744 |
| MfeI | CAATTG | 3 cut(s) | 187, 459, 3558 |
| MflI | RGATCY | 5 cut(s) | 1126, 1730, 2800, 3031, 3190 |
| MhlI | GDGCHC | 3 cut(s) | 2416, 2493, 2616 |
| MlyI | GAGTC | 2 cut(s) | 1370, 2003 |
| MmeI | TCCRAC | 4 cut(s) | 700, 795, 1773, 3696 |
| Mph1103I | ATGCAT | 1 cut(s) | 182 |
| MslI | CAYNNNNRTG | 2 cut(s) | 541, 2138 |
| MspA1I | CMGCKG | 1 cut(s) | 701 |
| MspCI | CTTAAG | 2 cut(s) | 929, 1286 |
| MspI | CCGG | 6 cut(s) | 254, 1101, 1184, 1873, 2431, 2639 |
| MspR9I | CCNGG | 6 cut(s) | 1874, 2029, 2431, 2753, 3283, 3414 |
| MunI | CAATTG | 3 cut(s) | 187, 459, 3558 |
| MvaI | CCWGG | 4 cut(s) | 2029, 2753, 3283, 3414 |
| MvnI | CGCG | 1 cut(s) | 1812 |
| NciI | CCSGG | 2 cut(s) | 1874, 2431 |
| NheI | GCTAGC | 1 cut(s) | 2512 |
| NlaIV | GGNNCC | 7 cut(s) | 488, 1390, 1871, 2223, 2320, 2794, 3088 |
| NmuCI | GTSAC | 4 cut(s) | 692, 2173, 2558, 3911 |
| NsiI | ATGCAT | 1 cut(s) | 182 |
| NspI | RCATGY | 3 cut(s) | 180, 249, 3244 |
| NspV | TTCGAA | 2 cut(s) | 412, 1474 |
| PaeI | GCATGC | 2 cut(s) | 180, 3244 |
| PaeR7I | CTCGAG | 1 cut(s) | 3245 |
| PagI | TCATGA | 2 cut(s) | 1990, 3801 |
| PciI | ACATGT | 1 cut(s) | 245 |
| PciSI | GCTCTTC | 1 cut(s) | 3339 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 814 |
| PfoI | TCCNGGA | 1 cut(s) | 3412 |
| PkrI | GCNGC | 5 cut(s) | 155, 927, 1137, 1720, 2595 |
| PleI | GAGTC | 2 cut(s) | 1370, 2002 |
| PpsI | GAGTC | 2 cut(s) | 1370, 2002 |
| PpuMI | RGGWCCY | 1 cut(s) | 2319 |
| PscI | ACATGT | 1 cut(s) | 245 |
| PshAI | GACNNNNGTC | 1 cut(s) | 2274 |
| PshBI | ATTAAT | 1 cut(s) | 2688 |
| PsiI | TTATAA | 1 cut(s) | 3922 |
| Psp1406I | AACGTT | 1 cut(s) | 750 |
| Psp5II | RGGWCCY | 1 cut(s) | 2319 |
| Psp6I | CCWGG | 4 cut(s) | 2027, 2751, 3281, 3412 |
| PspEI | GGTNACC | 1 cut(s) | 3911 |
| PspGI | CCWGG | 4 cut(s) | 2027, 2751, 3281, 3412 |
| PspN4I | GGNNCC | 7 cut(s) | 488, 1390, 1871, 2223, 2320, 2794, 3088 |
| PspPI | GGNCC | 7 cut(s) | 1351, 1511, 1870, 2319, 2996, 3380, 3494 |
| PspPPI | RGGWCCY | 1 cut(s) | 2319 |
| PstNI | CAGNNNCTG | 2 cut(s) | 797, 1379 |
| PsuI | RGATCY | 5 cut(s) | 1126, 1730, 2800, 3031, 3190 |
| PvuII | CAGCTG | 1 cut(s) | 701 |
| RseI | CAYNNNNRTG | 2 cut(s) | 541, 2138 |
| SapI | GCTCTTC | 1 cut(s) | 3339 |
| SatI | GCNGC | 5 cut(s) | 154, 926, 1136, 1719, 2594 |
| Sau96I | GGNCC | 7 cut(s) | 1351, 1511, 1870, 2319, 2996, 3380, 3494 |
| ScaI | AGTACT | 2 cut(s) | 940, 3202 |
| SchI | GAGTC | 2 cut(s) | 1370, 2003 |
| ScrFI | CCNGG | 6 cut(s) | 1874, 2029, 2431, 2753, 3283, 3414 |
| SduI | GDGCHC | 3 cut(s) | 2416, 2493, 2616 |
| SfcI | CTRYAG | 1 cut(s) | 1401 |
| Sfr274I | CTCGAG | 1 cut(s) | 3245 |
| SfuI | TTCGAA | 2 cut(s) | 412, 1474 |
| SinI | GGWCC | 5 cut(s) | 1351, 1870, 2319, 3380, 3494 |
| SlaI | CTCGAG | 1 cut(s) | 3245 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 541, 2138 |
| SmlI | CTYRAG | 3 cut(s) | 929, 1286, 3245 |
| SmoI | CTYRAG | 3 cut(s) | 929, 1286, 3245 |
| SphI | GCATGC | 2 cut(s) | 180, 3244 |
| SsiI | CCGC | 4 cut(s) | 1651, 2136, 2708, 3744 |
| SspI | AATATT | 3 cut(s) | 1157, 1461, 2074 |
| SspMI | CTAG | 8 cut(s) | 1191, 1554, 1724, 2087, 2513, 2729, 2787, 3564 |
| StyD4I | CCNGG | 6 cut(s) | 1872, 2027, 2429, 2751, 3281, 3412 |
| StyI | CCWWGG | 4 cut(s) | 1347, 1497, 2060, 2322 |
| TaiI | ACGT | 5 cut(s) | 107, 753, 1864, 2051, 2938 |
| TaqI | TCGA | 5 cut(s) | 132, 412, 935, 1474, 3246 |
| TatI | WGTACW | 5 cut(s) | 938, 1438, 3112, 3200, 3220 |
| TscAI | CASTG | 9 cut(s) | 167, 346, 789, 1249, 1776, 2586, 2895, 3097, 3402 |
| TseFI | GTSAC | 4 cut(s) | 692, 2173, 2558, 3911 |
| TseI | GCWGC | 5 cut(s) | 153, 925, 1135, 1718, 2593 |
| Tsp45I | GTSAC | 4 cut(s) | 692, 2173, 2558, 3911 |
| TspGWI | ACGGA | 2 cut(s) | 2678, 3668 |
| TspRI | CASTG | 9 cut(s) | 167, 346, 789, 1249, 1776, 2586, 2895, 3097, 3402 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 814 |
| Vha464I | CTTAAG | 2 cut(s) | 929, 1286 |
| VpaK11BI | GGWCC | 5 cut(s) | 1351, 1870, 2319, 3380, 3494 |
| VspI | ATTAAT | 1 cut(s) | 2688 |
| XapI | RAATTY | 7 cut(s) | 10, 27, 230, 1816, 1889, 3274, 3407 |
| XceI | RCATGY | 3 cut(s) | 180, 249, 3244 |
| XhoI | CTCGAG | 1 cut(s) | 3245 |
| XspI | CTAG | 8 cut(s) | 1191, 1554, 1724, 2087, 2513, 2729, 2787, 3564 |
| ZrmI | AGTACT | 2 cut(s) | 940, 3202 |
| Zsp2I | ATGCAT | 1 cut(s) | 182 |