MD06G1109300.v1.1

No description available

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr06
Physical Location & Seq
Forward (+)
24882142 .. 24891041
8900 bp
Loading structure...
UTR
Exon/CDS
Intron
MD06G1109300.v1.1.491

Sequence Viewer

Length: 4011 bp
ATGGAAGTTGATTTAGTTACGAGTCCAATGCAAGAGGAAGATGCTTTTGGAGTTGATGAGAACTATCAAAATGACAATCCCAATTTCGAGGGTGAAACATGTGGGATATGCATGAATGCAATAATCGACAGGGGTGTTCTCGATTGCTGCCAGCATTGGTTCTGTTTCTCATGCATTGACAATTGGGCTACCATTACAAACCTCTGCCCGCTTTGCCAGAATGAATTTCAAATGATCACATGTGTTCCGGTATATGATACTATTGGGAGCAGCAAAGCAGACGAGGACTCAACTTATAGTGATGATGATTGGTGTATTGAAGGGACGAATAACACTCTCTCATTTCCATCATACTACATTGATGAAAATGCAGTTACATGCTTGGATGGAGATGGCTGCAAAATTCGAAGTGGATCAGTGGCTATTGAGGAAGATTCCAATCTTGATACATCAATTGCTTGTGATTCATGTGAATTATGGTACCATGCTTTCTGTGTGGGATTTGATGCGGAGGGCACATCTGAGAGTACATGGTTATGCCCAAGATGTGTAGTTGATGAGATGACAAAAAAATCAGATGCAGGTTCAGTCCAGAGGTCTAACAAACAGTATGGTCCAGAAAATGCTAATGGTGAACCTGAAGCTGAGGATAATCTTTCTAGAAAGGTATCTGTTTCTGTTGCTGATAGTGGTGAGACAGCTGTTGTGGTCTCAATGGCTGGCGAAAATCGTGGGTATGGAAAACCAAGTGAAAGCATTTTGCCAGCCGGTGAAGTTGGAAAGGACCTGAAGTCTAAAGAATTGGTATTGTCTACTGACAATAGCCACAAATTGGAAAAACCTTCCTGGGAAAGAAATATTAACCAACCAGTTCTTGAAGCTCAGCAACTAAAACTGTCCCTATCCAGTGATACCTCCAGTTTACCTTCAAATTCTTTAGCACCAACGCAGTTAAGGATGAGTACTGATGGATCAACGAATGAGCCTAGTAGTTTTGATGGCATCACGAATGCTTCTGGAAAGACCTTTGATGAATCACAGATTAGTAACAAACAGTCTGACAATGACTCCAATGTGGGTCTTCATCTTGGGTTATCTGTGGTCTCGTTTTTGTCTGCTGCTGGCATGAATAATAATGACACTGAAGATGTGAAGCAGCACAATCCTTCAGAAGAATATTTTTCAAAAGCCGACACTCTCGTACCAAAAGAAGTGACTGAGGATGTGAAGCAGCACGATCGTTGGGAAGGATATTCACCTATAGCTGACGAAATTGTACCAGATGCTAATTTGGATGCCCCTGGATCGACTTCTGGTGGAAAGAGAAAGCGTATTGATTGCAGCGATGACATTCATATCATTGAGGATGATGGAGATACTGACCCTAAGATTGAGACCAAAGTTTCTGCTAAGAAAATCGGAGAGGATGAGAAGACACAATGCGTGGGTTCCAATGACCAAGCCAAAGAATCTGTTCCAGATGATTCTGAAAACTGTTCTATCCTGACTGTAGCTCATAAAGATAGCATGTTATCATCTCAACCTGTTGAGGGGAACACCACTTCCGATATAATGAGCATTGTTAGAACTACGAAGCCTAAATCTTCTAAGGGGATTGCACACTCTAATACTGCTGATAAATCATCACAAGAACAAGAAACTGTGCCTGGTTTGAAAGTTAAAAAGATCATGAGGAGAGCTGCTGAGGACAAGGACTCGCCTGTGACAGTTCAGACACTGAGAAAAGAAATAAGAGAAGCTGTCGGTAAAATTTCTTCAAAAGGTATTGGCGAAAACCTTTTCAATCCAAAGCTTCTTCATGCCTTTAGGACTGCTATAGCAGGAGGACCTCAAACTGAACCTGTTAAGAAGGTACCACATTTGGCACTGAACGCAAAGAAGGCAATATTGCAGAAGGGAAAAGTACGTGTGAATCTAACAAAAAAGATTTACGGGACATCCAATGGAAGAAGAAAACGTGCATGGGACCGGGACTGGCAAATCGAATTTTGGAAGCATCGCAGCTTAGGAACTACAGAGCCTGAAAAGATTGAGACTTTGAAGTCAGTTCTTAACCTTCTGAAAGAGAGGTCAGAGCGTGTAGATACAGAGCAGGTGTCCGATAAGCAGTCCACAAATCCAATTCTTTCCAGGTTATATTTAGCAGATGTATCGGTACTCCCAAGAAAAGATGATATTAAGCCGCTCTTACCTCTTAAAACTGCTGGTAATACAGAGCAGAATAATAAACAGCTTGCCTTGAATGAAAAGTGTTCAAAGTCATCTCTTAATAATTCTACTTCAAATTCCACAGAAACGAGTACGGTTTCATCAAAAGGCCGGGTTCCTTCATTGGAGAAATATGGGACTAAGAATAATGTTCCAAGCTCAGAGAATGGCGCTGCGTCTAACAGAGTACATCAAGACAAACGCTTGGAAGGGTCCTTGGTTTCTTTGTCTGGTGCTTCCAAATCTAAAACCACGAGTGAAGTGGTTGATAAAACTGACAAAAGAAAATGGGCTCTAGAAGTTCTTGCCAGGAAAAGTGGTGCAGGCACAAAAACGACAAATGAAAAACAGGAAGACAACACACTCAAAGCGAATTACCCTTTGCTAGCTCAATTACCAATAGACATGAGGCCAGTTTTGGCACCCAGTCGTCATAATAAAATCCCCTTATCAGTGAGGCAGACACAGCTGTACCGTCTGACTGAGCACTTTTTGAAGAAAGCGAATCTGTGGGTGATCCGTAGAACTGCGGATATGGAGTTAGCTGTTGTAGATGCAATAAATATAGAAAAGGGGGTTGCTGATAGGTCAAGCAGCAAGCTAGTGTATATGAATCTATGTTCCCAGGAGATATTGCATCGTTCAGAAAATAGGAAGTCTAGTGCAGGTGCAGCCCCGGTAAATAGTTCATCCCCATCTTCAGTCCCTGCTGATAGAGCAGAACAAGCTGCCAATGAACTTCCAACTGATCCTATAATTGAAGCAGCACTGAGAAATGCTGGTCTTCTGTCCGATTCTCCTCCAAATAGTCCACATCCCAATGTGGAAGTTCCTGCTGAAGAAGATGGCCCCTCGTTAGATATCAGAGAGGAAGGGTCTGATAATGTATTTGAAATGGATTTTCAGCCGGATCTGGACATATATGGTGACTTTGAGTATAATTTGGAAGAGGAAGACTACATTGGCGCTGCTGCTGCAAAAATCTCCAATCCACAACCAGAAGAAGGGGCACCAAAATTGAAACTGGTGTTCTCTACACTTCAACCTGAAAGATCTAATCAGAATCTAGATTCTGAGAAGACAGAGACGACTGTTGAAGTACAAAAAGATTCTTCCAGCATGCTCGAGAATCATACTTGTTCAGGTTTGGAAAACTCCATCATGGAGGGTGGGACTGACGAATCTAGCGTTCCTCTGGAATCCTTGTTCGGTAAAGAAGGTGAAGAACTTTCTGTTGCAGAATGTGAAGAATTGTATGGACCCGATAAAGAGCCACTGATAACGAAAGTTCCAGAAGCATCAGAAAAGCTATCTGGATTGATTGATGAAGCTTTGGTTAAAGATAAAGATTCTAAAGAGAATGAAAATTGTGCGCCAAAGTCAAACCAAGCAGTAAAAACAAATGGATTGGGTAAGGAGAACAATTTGAAAAAGATGCTTGTTGCCAGTGGTGGATGCAACTCAGCGAACCACATACAACCAGGTGAAAATGTTGATACGAAGGAGAAGAAATCCACTACGGATTCTAACAACCAGTCTAACAGCGTTGGTTCTGTATCTAAGAAGGTGGAAGCCTACATTAAAGAGCACATCAGACCGCTATGCAAGAGTGGCGTGATTACGGCTGAACAATACAAGTGGGCTGTCGCAAAAACAACTGATAAGGTTATGAAATACCATTCTAAATCCAAGAATGCAAATTTCCTAATTAAGGAAGGTGAGAAGGTGAAGAAACTCGCGGAGCAGTATGTTGAGACAGCCCAACAGAACGAAAACAGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1337

Amino Acids

146.21

Weight (kDa)

5.02

Isoelectric Point (pI)

43.18

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
zf-RING_2 PF13639 33 - 73 8.9e-07 Ring finger domain
PHD PF00628 146 - 183 7.2e-08 PHD-finger
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 2104, 2885
AasI GACNNNNNNGTC 1 cut(s) 2062
Acc36I ACCTGC 3 cut(s) 572, 2104, 2885
Acc65I GGTACC 2 cut(s) 480, 1873
AccB1I GGYRCC 4 cut(s) 480, 1873, 2650, 3238
AccB7I CCANNNNNTGG 1 cut(s) 832
AccBSI CCGCTC 1 cut(s) 2206
AccI GTMKAC 1 cut(s) 812
AccII CGCG 1 cut(s) 3968
AciI CCGC 6 cut(s) 209, 509, 2204, 2759, 3827, 3968
AclWI GGATC 6 cut(s) 421, 979, 1312, 2740, 2972, 3147
AcsI RAATTY 7 cut(s) 224, 402, 931, 1770, 2006, 2305, 3928
AcuI CTGAAG 6 cut(s) 660, 809, 1152, 1164, 2913, 3087
AfiI CCNNNNNNNGG 4 cut(s) 832, 1550, 3233, 3940
AflIII ACRYGT 3 cut(s) 98, 239, 1927
AhdI GACNNNNNGTC 1 cut(s) 790
AjnI CCWGG 7 cut(s) 845, 1300, 1666, 2150, 2537, 2853, 3709
AjuI GAANNNNNNNTTGG 4 cut(s) 30, 62, 3174, 3206
AloI GAACNNNNNNTCC 4 cut(s) 1547, 1579, 3419, 3451
Alw21I GWGCWC 2 cut(s) 2718, 3819
Alw26I GTCTC 7 cut(s) 689, 715, 1108, 1388, 2048, 3308, 3977
AlwI GGATC 6 cut(s) 421, 979, 1312, 2740, 2972, 3147
AlwNI CAGNNNCTG 3 cut(s) 1738, 2042, 2936
Ama87I CYCGRG 1 cut(s) 3353
AoxI GGCC 3 cut(s) 2338, 2639, 3076
ApoI RAATTY 7 cut(s) 224, 402, 931, 1770, 2006, 2305, 3928
Asp700I GAANNNNTTC 1 cut(s) 1473
Asp718I GGTACC 2 cut(s) 480, 1873
AspLEI GCGC 3 cut(s) 2402, 3197, 3604
AspS9I GGNCC 7 cut(s) 614, 784, 1847, 1987, 2442, 3077, 3488
AsuC2I CCSGG 3 cut(s) 1991, 2342, 2906
AsuII TTCGAA 1 cut(s) 406
AsuNHI GCTAGC 1 cut(s) 2614
AvaI CYCGRG 1 cut(s) 3353
AvaII GGWCC 6 cut(s) 614, 784, 1847, 1987, 2442, 3488
BaeGI GKGCMC 2 cut(s) 518, 3241
BaeI ACNNNNGTAYC 4 cut(s) 1185, 1218, 2684, 2717
BanI GGYRCC 4 cut(s) 480, 1873, 2650, 3238
BanII GRGCYC 1 cut(s) 2524
BarI GAAGNNNNNNTAC 2 cut(s) 1759, 1791
BauI CACGAG 1 cut(s) 2482
BbsI GAAGAC 6 cut(s) 1073, 1439, 2589, 3005, 3189, 3314
Bbv12I GWGCWC 2 cut(s) 2718, 3819
BbvCI CCTCAGC 2 cut(s) 645, 1704
BccI CCATC 9 cut(s) 355, 380, 386, 962, 992, 1364, 2932, 3068, 3395
BceAI ACGGC 1 cut(s) 3867
BcgI CGANNNNNNTGC 6 cut(s) 10, 44, 1220, 1254, 2154, 2188
BciT130I CCWGG 7 cut(s) 847, 1302, 1668, 2152, 2539, 2855, 3711
BclI TGATCA 1 cut(s) 234
BcnI CCSGG 3 cut(s) 1991, 2342, 2906
BcoDI GTCTC 7 cut(s) 689, 715, 1108, 1388, 2048, 3308, 3977
BfaI CTAG 8 cut(s) 660, 987, 2525, 2615, 2831, 2889, 3296, 3414
BfmI CTRYAG 4 cut(s) 1260, 1509, 1836, 2034
BfoI RGCGCY 2 cut(s) 2403, 3198
BfuAI ACCTGC 3 cut(s) 572, 2104, 2885
BglII AGATCT 1 cut(s) 3281
BlpI GCTNAGC 1 cut(s) 882
BmcAI AGTACT 1 cut(s) 964
Bme18I GGWCC 6 cut(s) 614, 784, 1847, 1987, 2442, 3488
BmeRI GACNNNNNGTC 1 cut(s) 790
BmeT110I CYCGRG 1 cut(s) 3353
BmgT120I GGNCC 7 cut(s) 614, 784, 1847, 1987, 2442, 3077, 3488
BmrI ACTGGG 1 cut(s) 2649
BmtI GCTAGC 1 cut(s) 2618
BmuI ACTGGG 1 cut(s) 2649
BpiI GAAGAC 6 cut(s) 1073, 1439, 2589, 3005, 3189, 3314
BpmI CTGGAG 1 cut(s) 901
Bpu10I CCTNAGC 3 cut(s) 645, 1704, 2026
Bpu1102I GCTNAGC 1 cut(s) 882
Bpu14I TTCGAA 1 cut(s) 406
BpuMI CCSGG 3 cut(s) 1991, 2342, 2906
BsaAI YACGTR 1 cut(s) 1928
BsaBI GATNNNNATC 1 cut(s) 438
BsaI GGTCTC 3 cut(s) 715, 1108, 1388
BsaJI CCNNGG 5 cut(s) 846, 1300, 2445, 2853, 2904
BsaWI WCCGGW 1 cut(s) 247
BsaXI ACNNNNNCTCC 2 cut(s) 1052, 1082
Bsc4I CCNNNNNNNGG 4 cut(s) 832, 1550, 3233, 3940
Bse118I RCCGGY 1 cut(s) 767
Bse1I ACTGG 9 cut(s) 869, 906, 918, 2000, 2642, 2655, 3258, 3675, 3763
Bse8I GATNNNNATC 1 cut(s) 438
BseBI CCWGG 7 cut(s) 847, 1302, 1668, 2152, 2539, 2855, 3711
BseDI CCNNGG 5 cut(s) 846, 1300, 2445, 2853, 2904
BseJI GATNNNNATC 1 cut(s) 438
BseLI CCNNNNNNNGG 4 cut(s) 832, 1550, 3233, 3940
BseNI ACTGG 9 cut(s) 869, 906, 918, 2000, 2642, 2655, 3258, 3675, 3763
BseRI GAGGAG 2 cut(s) 1708, 3018
BseSI GKGCMC 2 cut(s) 518, 3241
BsgI GTGCAG 3 cut(s) 2571, 2913, 2919
Bsh1236I CGCG 1 cut(s) 3968
Bsh1285I CGRYCG 1 cut(s) 1240
BshFI GGCC 3 cut(s) 2340, 2641, 3078
BshNI GGYRCC 4 cut(s) 480, 1873, 2650, 3238
BsiEI CGRYCG 1 cut(s) 1240
BsiHKAI GWGCWC 2 cut(s) 2718, 3819
BsiHKCI CYCGRG 1 cut(s) 3353
BsiSI CCGG 6 cut(s) 248, 768, 1990, 2341, 2906, 3137
BslFI GGGAC 8 cut(s) 337, 883, 1969, 2000, 2006, 2380, 2918, 3415
BslI CCNNNNNNNGG 4 cut(s) 832, 1550, 3233, 3940
BsmAI GTCTC 7 cut(s) 689, 715, 1108, 1388, 2048, 3308, 3977
BsmBI CGTCTC 1 cut(s) 3308
BsmFI GGGAC 8 cut(s) 337, 883, 1969, 2000, 2006, 2380, 2918, 3415
BsmI GAATGC 3 cut(s) 121, 1015, 3928
BsnI GGCC 3 cut(s) 2340, 2641, 3078
Bso31I GGTCTC 3 cut(s) 715, 1108, 1388
BsoBI CYCGRG 1 cut(s) 3353
Bsp119I TTCGAA 1 cut(s) 406
Bsp1286I GDGCHC 5 cut(s) 518, 2524, 2718, 3241, 3819
Bsp1720I GCTNAGC 1 cut(s) 882
BspACI CCGC 6 cut(s) 209, 509, 2204, 2759, 3827, 3968
BspANI GGCC 3 cut(s) 2340, 2641, 3078
BspFNI CGCG 1 cut(s) 3968
BspHI TCATGA 1 cut(s) 1689
BspMI ACCTGC 3 cut(s) 572, 2104, 2885
BspOI GCTAGC 1 cut(s) 2618
BspPI GGATC 6 cut(s) 421, 979, 1312, 2740, 2972, 3147
BspT104I TTCGAA 1 cut(s) 406
BspT107I GGYRCC 4 cut(s) 480, 1873, 2650, 3238
BspTNI GGTCTC 3 cut(s) 715, 1108, 1388
BsrBI CCGCTC 1 cut(s) 2206
BsrFI RCCGGY 1 cut(s) 767
BsrI ACTGG 9 cut(s) 869, 906, 918, 2000, 2642, 2655, 3258, 3675, 3763
BssAI RCCGGY 1 cut(s) 767
BssECI CCNNGG 5 cut(s) 846, 1300, 2445, 2853, 2904
BssSI CACGAG 1 cut(s) 2482
BssT1I CCWWGG 1 cut(s) 2445
Bst2BI CACGAG 1 cut(s) 2482
Bst2UI CCWGG 7 cut(s) 847, 1302, 1668, 2152, 2539, 2855, 3711
Bst6I CTCTTC 1 cut(s) 3171
BstBAI YACGTR 1 cut(s) 1928
BstBI TTCGAA 1 cut(s) 406
BstENI CCTNNNNNAGG 1 cut(s) 3938
BstFNI CGCG 1 cut(s) 3968
BstH2I RGCGCY 2 cut(s) 2403, 3198
BstHHI GCGC 3 cut(s) 2402, 3197, 3604
BstMAI GTCTC 7 cut(s) 689, 715, 1108, 1388, 2048, 3308, 3977
BstMCI CGRYCG 1 cut(s) 1240
BstMWI GCNNNNNNNGC 9 cut(s) 213, 1892, 1901, 2695, 2900, 2945, 2954, 3203, 3840
BstNI CCWGG 7 cut(s) 847, 1302, 1668, 2152, 2539, 2855, 3711
BstNSI RCATGY 5 cut(s) 102, 243, 381, 1531, 3352
BstSFI CTRYAG 4 cut(s) 1260, 1509, 1836, 2034
BstSLI GKGCMC 2 cut(s) 518, 3241
BstUI CGCG 1 cut(s) 3968
BstV2I GAAGAC 6 cut(s) 1073, 1439, 2589, 3005, 3189, 3314
BstX2I RGATCY 2 cut(s) 3139, 3281
BstYI RGATCY 2 cut(s) 3139, 3281
BsuRI GGCC 3 cut(s) 2340, 2641, 3078
BtgZI GCGATG 2 cut(s) 1359, 2003
BtsIMutI CAGTG 9 cut(s) 423, 913, 1140, 1736, 1886, 2688, 2996, 3503, 3682
BveI ACCTGC 3 cut(s) 572, 2104, 2885
CaiI CAGNNNCTG 3 cut(s) 1738, 2042, 2936
CciI TCATGA 1 cut(s) 1689
CfoI GCGC 3 cut(s) 2402, 3197, 3604
Cfr10I RCCGGY 1 cut(s) 767
Cfr13I GGNCC 7 cut(s) 614, 784, 1847, 1987, 2442, 3077, 3488
CseI GACGC 1 cut(s) 2394
CsiI ACCWGGT 1 cut(s) 3709
CspCI CAANNNNNGTGG 2 cut(s) 3848, 3883
DrdI GACNNNNNNGTC 1 cut(s) 2062
DriI GACNNNNNGTC 1 cut(s) 790
DseDI GACNNNNNNGTC 1 cut(s) 2062
Eam1104I CTCTTC 1 cut(s) 3171
Eam1105I GACNNNNNGTC 1 cut(s) 790
EarI CTCTTC 1 cut(s) 3171
Eco130I CCWWGG 1 cut(s) 2445
Eco24I GRGCYC 1 cut(s) 2524
Eco31I GGTCTC 3 cut(s) 715, 1108, 1388
Eco32I GATATC 1 cut(s) 3091
Eco47I GGWCC 6 cut(s) 614, 784, 1847, 1987, 2442, 3488
Eco57I CTGAAG 6 cut(s) 660, 809, 1152, 1164, 2913, 3087
Eco88I CYCGRG 1 cut(s) 3353
EcoNI CCTNNNNNAGG 1 cut(s) 3938
EcoO109I RGGNCCY 3 cut(s) 784, 1847, 2442
EcoRII CCWGG 7 cut(s) 845, 1300, 1666, 2150, 2537, 2853, 3709
EcoRV GATATC 1 cut(s) 3091
EcoT14I CCWWGG 1 cut(s) 2445
EcoT22I ATGCAT 2 cut(s) 113, 176
EcoT38I GRGCYC 1 cut(s) 2524
ErhI CCWWGG 1 cut(s) 2445
Esp3I CGTCTC 1 cut(s) 3308
FalI AAGNNNNNCTT 2 cut(s) 2192, 2224
FaqI GGGAC 8 cut(s) 337, 883, 1969, 2000, 2006, 2380, 2918, 3415
FauI CCCGC 1 cut(s) 216
FbaI TGATCA 1 cut(s) 234
FblI GTMKAC 1 cut(s) 812
FriOI GRGCYC 1 cut(s) 2524
FspBI CTAG 8 cut(s) 660, 987, 2525, 2615, 2831, 2889, 3296, 3414
GlaI GCGC 3 cut(s) 2401, 3196, 3603
GsuI CTGGAG 1 cut(s) 901
HaeII RGCGCY 2 cut(s) 2403, 3198
HaeIII GGCC 3 cut(s) 2340, 2641, 3078
HapII CCGG 6 cut(s) 248, 768, 1990, 2341, 2906, 3137
HgaI GACGC 1 cut(s) 2394
HhaI GCGC 3 cut(s) 2402, 3197, 3604
Hin6I GCGC 3 cut(s) 2400, 3195, 3602
HinP1I GCGC 3 cut(s) 2400, 3195, 3602
HindIII AAGCTT 2 cut(s) 1811, 3558
HpaII CCGG 6 cut(s) 248, 768, 1990, 2341, 2906, 3137
Hpy166II GTNNAC 5 cut(s) 635, 813, 923, 2133, 3041
Hpy8I GTNNAC 5 cut(s) 635, 813, 923, 2133, 3041
HpyCH4IV ACGT 2 cut(s) 1927, 1978
HpyF10VI GCNNNNNNNGC 9 cut(s) 213, 1892, 1901, 2695, 2900, 2945, 2954, 3203, 3840
HpySE526I ACGT 2 cut(s) 1927, 1978
HspAI GCGC 3 cut(s) 2400, 3195, 3602
KpnI GGTACC 2 cut(s) 484, 1877
Ksp22I TGATCA 1 cut(s) 234
LmnI GCTCC 2 cut(s) 267, 3970
MabI ACCWGGT 1 cut(s) 3709
MaeI CTAG 8 cut(s) 660, 987, 2525, 2615, 2831, 2889, 3296, 3414
MaeII ACGT 2 cut(s) 1927, 1978
MaeIII GTNAC 6 cut(s) 16, 373, 1046, 1213, 1723, 3155
MbiI CCGCTC 1 cut(s) 2206
MfeI CAATTG 2 cut(s) 181, 453
MflI RGATCY 2 cut(s) 3139, 3281
MhlI GDGCHC 5 cut(s) 518, 2524, 2718, 3241, 3819
MlyI GAGTC 4 cut(s) 31, 281, 1061, 1709
MmeI TCCRAC 2 cut(s) 757, 2996
Mph1103I ATGCAT 2 cut(s) 113, 176
MroXI GAANNNNTTC 1 cut(s) 1473
MslI CAYNNNNRTG 2 cut(s) 535, 3048
MspA1I CMGCKG 3 cut(s) 701, 2698, 4008
MspI CCGG 6 cut(s) 248, 768, 1990, 2341, 2906, 3137
MunI CAATTG 2 cut(s) 181, 453
Mva1269I GAATGC 3 cut(s) 121, 1015, 3928
MvaI CCWGG 7 cut(s) 847, 1302, 1668, 2152, 2539, 2855, 3711
MvnI CGCG 1 cut(s) 3968
MwoI GCNNNNNNNGC 9 cut(s) 213, 1892, 1901, 2695, 2900, 2945, 2954, 3203, 3840
NciI CCSGG 3 cut(s) 1991, 2342, 2906
NheI GCTAGC 1 cut(s) 2614
NmuCI GTSAC 3 cut(s) 1213, 1723, 3155
NsiI ATGCAT 2 cut(s) 113, 176
NspI RCATGY 5 cut(s) 102, 243, 381, 1531, 3352
NspV TTCGAA 1 cut(s) 406
PaeI GCATGC 1 cut(s) 3352
PaeR7I CTCGAG 1 cut(s) 3353
PagI TCATGA 1 cut(s) 1689
PaqCI CACCTGC 2 cut(s) 2104, 2885
PciI ACATGT 2 cut(s) 98, 239
PcsI WCGNNNNNNNCGW 1 cut(s) 3414
PctI GAATGC 3 cut(s) 121, 1015, 3928
PdmI GAANNNNTTC 1 cut(s) 1473
PflMI CCANNNNNTGG 1 cut(s) 832
Ple19I CGATCG 1 cut(s) 1240
PleI GAGTC 4 cut(s) 30, 281, 1061, 1709
PpsI GAGTC 4 cut(s) 30, 281, 1061, 1709
Ppu21I YACGTR 1 cut(s) 1928
PpuMI RGGWCCY 3 cut(s) 784, 1847, 2442
PscI ACATGT 2 cut(s) 98, 239
Psp5II RGGWCCY 3 cut(s) 784, 1847, 2442
Psp6I CCWGG 7 cut(s) 845, 1300, 1666, 2150, 2537, 2853, 3709
PspGI CCWGG 7 cut(s) 845, 1300, 1666, 2150, 2537, 2853, 3709
PspPI GGNCC 7 cut(s) 614, 784, 1847, 1987, 2442, 3077, 3488
PspPPI RGGWCCY 3 cut(s) 784, 1847, 2442
PstNI CAGNNNCTG 3 cut(s) 1738, 2042, 2936
PsuI RGATCY 2 cut(s) 3139, 3281
PvuI CGATCG 1 cut(s) 1240
PvuII CAGCTG 3 cut(s) 701, 2698, 4008
RseI CAYNNNNRTG 2 cut(s) 535, 3048
Sau96I GGNCC 7 cut(s) 614, 784, 1847, 1987, 2442, 3077, 3488
ScaI AGTACT 1 cut(s) 964
SchI GAGTC 4 cut(s) 31, 281, 1061, 1709
SduI GDGCHC 5 cut(s) 518, 2524, 2718, 3241, 3819
SexAI ACCWGGT 1 cut(s) 3709
SfcI CTRYAG 4 cut(s) 1260, 1509, 1836, 2034
Sfr274I CTCGAG 1 cut(s) 3353
SfuI TTCGAA 1 cut(s) 406
SinI GGWCC 6 cut(s) 614, 784, 1847, 1987, 2442, 3488
SlaI CTCGAG 1 cut(s) 3353
SmiMI CAYNNNNRTG 2 cut(s) 535, 3048
SmlI CTYRAG 1 cut(s) 3353
SmoI CTYRAG 1 cut(s) 3353
SphI GCATGC 1 cut(s) 3352
SsiI CCGC 6 cut(s) 209, 509, 2204, 2759, 3827, 3968
SspI AATATT 3 cut(s) 859, 1178, 1908
SspMI CTAG 8 cut(s) 660, 987, 2525, 2615, 2831, 2889, 3296, 3414
StyI CCWWGG 1 cut(s) 2445
TaiI ACGT 2 cut(s) 1930, 1981
TaqI TCGA 7 cut(s) 87, 126, 141, 406, 1307, 2004, 3354
TatI WGTACW 4 cut(s) 527, 962, 2416, 3328
TauI GCSGC 1 cut(s) 2206
TscAI CASTG 9 cut(s) 423, 913, 1147, 1743, 1893, 2688, 3003, 3510, 3682
TseFI GTSAC 3 cut(s) 1213, 1723, 3155
Tsp45I GTSAC 3 cut(s) 1213, 1723, 3155
TspGWI ACGGA 2 cut(s) 2738, 3764
TspRI CASTG 9 cut(s) 423, 913, 1147, 1743, 1893, 2688, 3003, 3510, 3682
Van91I CCANNNNNTGG 1 cut(s) 832
VpaK11BI GGWCC 6 cut(s) 614, 784, 1847, 1987, 2442, 3488
XagI CCTNNNNNAGG 1 cut(s) 3938
XapI RAATTY 7 cut(s) 224, 402, 931, 1770, 2006, 2305, 3928
XbaI TCTAGA 3 cut(s) 659, 2524, 3295
XceI RCATGY 5 cut(s) 102, 243, 381, 1531, 3352
XcmI CCANNNNNNNNNTGG 1 cut(s) 2488
XhoI CTCGAG 1 cut(s) 3353
XmiI GTMKAC 1 cut(s) 812
XmnI GAANNNNTTC 1 cut(s) 1473
XspI CTAG 8 cut(s) 660, 987, 2525, 2615, 2831, 2889, 3296, 3414
ZrmI AGTACT 1 cut(s) 964
Zsp2I ATGCAT 2 cut(s) 113, 176
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.