FvH4_5g06260

C2 and GRAM domain-containing protein

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
Physical Location & Seq
Forward (+)
3689196 .. 3694879
5684 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g06260.t3

Sequence Viewer

Length: 3075 bp
ATGAGGCTTTACGTGTATGTGATGGAAGCTCATGACTTAGCTGTTAAGGACTCGTCCTGCTTTGTGGAGGTTCAGGTTGGGAAGCACAAGTCCAAGACTAGGATTCTGAGGAACACCAACAACAACCTGGCTTGGAATGAAGAGTTTGTATTCAGTGTGTATGAAATGAATGAAGAGCTACTTGTGTCTGTTTTTCACCAGGATGATGACTGCAATGGTCTGTTTAATGGGGTGGAGTTAGTCGGTCGGGTTCGGATTCCGGTGGGGTCTGTTGCTGCTGAGAATAATAGTACCTTACCGCCGGCATGGTATTCTCTTGAAAGGCTCAAGTCCGGGAAGTTCATCAATATAGATTGTGGAAAGGTTCTTCTCACTCTTTCTTTGCATGAAAAAGGCCACAATGTTGCTGCTAATGACCTCCCTTGTTCGCACTCAAATATAACTGAGGAGCCTAAAGAGACTGACAGTCCATTTGTATCATCTAATTGTGTCTTATGCTCCAAATCTCCACGTGGAAAAACACTAGGAGGAAAACAATTGATGAAGGCTCTTAGGAGACGTATGGACAGGCTTCTTCATAAGAATGAGGAAGGTTCAAGAACTGATGATTCTTCAGAGCTGTCTAGTTCAGTATCTGACTATGAAGATTGCATGGAGGAACAGCATTCTGGTTTTAGCTTTGAAGAATCTCTTGAAATGATGCAGTCAAGAGAGAGCAAACAAAGAATGCCAGAGAATCTTCAAGGGGGAATTCTTATTGATCGGGCTTATGTTGTTTCACCAAATGATCTTAATGCATTTCTCTTTAGCCCAAATTCACAGTTTAGGAGAGATTTAGCAGAACGTCAGGGGACAACAGATTTACGTGAGGGGCCTTGGACGTGGAAATCAGGAGAGTTGTCGTGTTTAACACGAGTCGTTACCTACATAAATGCTGCAACGAAGTTGGTGAAAGCTGTTAAAGCCACAGAGGAGCAAACATATCTCATAGCAAACGGAAGGGAATTTGCTGTATTGGCGAGTGTTTGTACACCCGAAGTTCCATATGGAAGTTCATTCAAGGTTGAATTGCTTTACAAGATATCGCCTGGACCAGACCTACCTTCAGGGGAAGAGTCGTCCCGCCTTGTGGTATCCTGGGTAGTTAACTTTCTCCATAGCACATTGATGAAAGGCATGATTGAAGGAGGAGTTCGACAGGGACTTATGGACAGTTTCGAGCAGTTCTCCAGCTTGATGGCTCAGAAGTTTAAAGTGCTGGATTCTACAGATTTATCTGACAAGGATCATATCCTGGCAAGTATGCAGGCAGGACACCAATCAGATTGGGAACTGGCGAAAGAGTACTTCTGGAATATGACAGTTGTTTCCACTATTTGTATGGTTTTATATATACTGGTGCACATTTTACTTTGTGAACCAAGTAAACTCCAAGGCCTAGAATTTCATGGAGTCGATTTGCCAGACAGTATTGGAGAGTTTATAACATGTGGAATTCTAGTCCTGCAATTGGAGCGCATTTATAATATGGCTCACCACTTTGTACAAGCCAGGTTGCAACAAGGCAATGATCATGGAGTCAAATCCCAAGGTGATGGATGGGTTCTCACTGTTGCCTTGATTGAGGGGACAAACTTAGCCTCTTTGAATTCATCAGGGTTCTCTGATCCCTATGTGGTTTTCACCAGCAATGGTAAAACAAGAACAAGCTCTGTCAGGCTTCAAACTACTGATCCTCAATGGAATGATATACTTGAGTTCGATGCTATGGAAGAACCTCCATCAGTTCTAGACGTGGAAGTTTTTGATTTTGATGGCCCTTTTGACCAAGCTATGTCACTCGGGCATGCGGAGATCAATTTTCTGAAACACTCCGCTACTGAACTCGCGGACATGTGGGTCCCCCTTGAGGGAAAGCTTGCTCAGTCTTCTCAATCAAAGCTGCACTTAAGAATCTTTCTGGATAATACCAAAGGACTTGAAACAATCAAGGAATATATGACCAAAATGGAAAAGGAGGTTGGAAAGAAGTTGGATCTCCGATCGCCTCATAGGAATTCTACATTTCAGAAATTGTTTGGGTTACCACCAGAAGAATTTCTCGTCAGTGATTTTACATGTGCACTGAAAAGGAAAATGCTAGTGCAGGGACGACTTTTTCTATCTGCAAGAATAGTTGGATTTTATGCAAACTTGTTTGGACACAAAACAAAATTTTTCTTTCTTTGGGAGGATATTGAAGATATCCAAGAGCATCCCCCCTCCCTATCATCTATGGGAAGCCCTTTGCTGGTTATTGTACTGAAAAAGGATCGAGGTGTTGATGCAAGGCATGGAGCGAAGTGCCAAGATGAAGAAGGCCGGCTTAGATTTTATTTCCAATCATTTTTGTCATTCAGTTCAGCAAGCAGGACGATAGTAGGCTTGTGGAGAACAAGAGCACTAAGTCCAGATCAGAAAGCACAAATTGTAGAAGATCAGGATGATTATGAAGAAAGGTCCAAGATGGTTGAAGATACTGAATACATACTCGATCTTGAAGATACAAAGATGTCTAAGGTTTATACTGCAGAAATACCTGTGAATACAAAATCTTTGATGGAAATGTTCAATGGAGGAGAGCTGGAGCACAAAATTATGGGGAAATCAGGTTGTCTTAACTATGCAACGACTGCATGGGAATCTATAAAACCGGATGTTTTTGAGCGACGTTTGTCTTACAGATTCAACCGCAATGTTTCCATTTTTGGGGGAGAGGTGGCATGCAGACAACGGAAGTCTCCAATTGCAAATGGTGAGGGCTGGATCATTGATGAAGTCATGGCCCTGCAGGGTGTTCCATTTGGCGATCGTTTTCGAGTGCAGTTAAGGTACCGGATTGAGAAATCTGGCCTTGCTCATAATGCATGTAAATGCATTGTCTATGTCAGGGTCACCTGGCTCAAAAGCACAATGTTTCTGGAAAGGATCAAACACAACATAACTGAGAAGTTTGCTCATAGAATGAAGGATATATTTGAATTGGGACAGAGGGAGATTCTCTTGACACCTCAACAGGACATTGGCCTTAGATAA
Functional Annotation
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

1025

Amino Acids

116.1

Weight (kDa)

5.75

Isoelectric Point (pI)

48.85

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
VASt PF16016 72 - 221 1.3e-31 VAD1 Analog of StAR-related lipid transfer domain
C2 PF00168 355 - 456 1.4e-14 C2 domain
GRAM PF02893 508 - 597 1.6e-16 GRAM domain
VASt PF16016 674 - 815 5.8e-23 VAD1 Analog of StAR-related lipid transfer domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

Orthologous Genes (Group: OG0011354)

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 1484, 1524
AasI GACNNNNNNGTC 1 cut(s) 1898
Acc65I GGTACC 1 cut(s) 2871
AccB1I GGYRCC 1 cut(s) 2871
AccII CGCG 1 cut(s) 1889
AciI CCGC 6 cut(s) 299, 1123, 1850, 1875, 1889, 2731
AclWI GGATC 7 cut(s) 1293, 1661, 1727, 2043, 2319, 2813, 2975
AcsI RAATTY 9 cut(s) 750, 814, 1004, 1442, 1494, 1648, 2056, 2096, 2213
AcuI CTGAAG 2 cut(s) 597, 1089
AcvI CACGTG 1 cut(s) 512
AfaI GTAC 6 cut(s) 292, 1030, 1346, 1545, 2301, 2873
AfiI CCNNNNNNNGG 7 cut(s) 99, 1129, 1510, 1909, 1910, 2290, 2748
AflII CTTAAG 1 cut(s) 1948
AflIII ACRYGT 4 cut(s) 12, 1487, 1893, 2117
AhdI GACNNNNNGTC 1 cut(s) 465
AjiI CACGTC 2 cut(s) 882, 1795
AjnI CCWGG 7 cut(s) 126, 198, 1087, 1136, 1293, 1550, 2936
AjuI GAANNNNNNNTTGG 2 cut(s) 2004, 2036
Alw21I GWGCWC 4 cut(s) 1404, 2125, 2443, 2631
Alw26I GTCTC 3 cut(s) 452, 550, 2784
Alw44I GTGCAC 2 cut(s) 1400, 2121
AlwI GGATC 7 cut(s) 1293, 1661, 1727, 2043, 2319, 2813, 2975
AlwNI CAGNNNCTG 1 cut(s) 635
Ama87I CYCGRG 1 cut(s) 1841
AoxI GGCC 8 cut(s) 394, 872, 1435, 1816, 2359, 2823, 2890, 3064
ApaLI GTGCAC 2 cut(s) 1400, 2121
ApeKI GCWGC 4 cut(s) 275, 407, 935, 1942
ApoI RAATTY 9 cut(s) 750, 814, 1004, 1442, 1494, 1648, 2056, 2096, 2213
ArsI GACNNNNNNTTYG 2 cut(s) 455, 487
Asp700I GAANNNNTTC 1 cut(s) 2097
Asp718I GGTACC 1 cut(s) 2871
AspLEI GCGC 1 cut(s) 1518
AspS9I GGNCC 6 cut(s) 872, 1091, 1817, 1900, 2499, 2824
AsuC2I CCSGG 1 cut(s) 334
AsuHPI GGTGA 8 cut(s) 188, 771, 961, 1526, 1604, 1675, 2807, 2926
AvaI CYCGRG 1 cut(s) 1841
AvaII GGWCC 3 cut(s) 1091, 1900, 2499
BaeGI GKGCMC 2 cut(s) 1404, 2125
BanI GGYRCC 1 cut(s) 2871
BauI CACGAG 1 cut(s) 912
BbrPI CACGTG 1 cut(s) 512
BbsI GAAGAC 1 cut(s) 1920
Bbv12I GWGCWC 4 cut(s) 1404, 2125, 2443, 2631
BbvI GCAGC 4 cut(s) 262, 394, 922, 1929
BccI CCATC 8 cut(s) 16, 1231, 1589, 1593, 1789, 1808, 2500, 2593
BciT130I CCWGG 7 cut(s) 128, 200, 1089, 1138, 1295, 1552, 2938
BciVI GTATCC 1 cut(s) 1144
BclI TGATCA 1 cut(s) 1570
BcnI CCSGG 1 cut(s) 334
BcoDI GTCTC 3 cut(s) 452, 550, 2784
BfaI CTAG 7 cut(s) 99, 524, 624, 1439, 1499, 1790, 2141
BfmI CTRYAG 3 cut(s) 1266, 2568, 2828
BfrI CTTAAG 1 cut(s) 1948
BfuI GTATCC 1 cut(s) 1144
BisI GCNGC 4 cut(s) 276, 408, 936, 1943
BlsI GCNGC 4 cut(s) 277, 409, 937, 1944
BmcAI AGTACT 1 cut(s) 1346
Bme1390I CCNGG 8 cut(s) 128, 200, 334, 1089, 1138, 1295, 1552, 2938
Bme18I GGWCC 3 cut(s) 1091, 1900, 2499
BmeRI GACNNNNNGTC 1 cut(s) 465
BmeT110I CYCGRG 1 cut(s) 1841
BmgBI CACGTC 2 cut(s) 882, 1795
BmgT120I GGNCC 6 cut(s) 872, 1091, 1817, 1900, 2499, 2824
BmiI GGNNCC 5 cut(s) 450, 873, 1901, 1902, 2873
BmrFI CCNGG 8 cut(s) 128, 200, 334, 1089, 1138, 1295, 1552, 2938
BmsI GCATC 4 cut(s) 690, 1753, 2263, 2314
BoxI GACNNNNGTC 1 cut(s) 2713
BpiI GAAGAC 1 cut(s) 1920
BplI GAGNNNNNCTC 2 cut(s) 1211, 1243
BpmI CTGGAG 2 cut(s) 1213, 2645
BpuEI CTTGAG 3 cut(s) 311, 1775, 1928
BpuMI CCSGG 1 cut(s) 334
BsaAI YACGTR 3 cut(s) 13, 512, 866
BsaJI CCNNGG 4 cut(s) 875, 1137, 1432, 1588
BsaWI WCCGGW 3 cut(s) 259, 2692, 2874
Bsc4I CCNNNNNNNGG 7 cut(s) 99, 1129, 1510, 1909, 1910, 2290, 2748
Bse118I RCCGGY 2 cut(s) 301, 2361
Bse1I ACTGG 2 cut(s) 1338, 1401
Bse3DI GCAATG 4 cut(s) 220, 1573, 1696, 2740
BseBI CCWGG 7 cut(s) 128, 200, 1089, 1138, 1295, 1552, 2938
BseDI CCNNGG 4 cut(s) 875, 1137, 1432, 1588
BseGI GGATG 5 cut(s) 208, 1604, 2254, 2488, 2701
BseLI CCNNNNNNNGG 7 cut(s) 99, 1129, 1510, 1909, 1910, 2290, 2748
BseMI GCAATG 4 cut(s) 220, 1573, 1696, 2740
BseMII CTCAG 6 cut(s) 98, 270, 435, 1256, 1937, 2976
BseNI ACTGG 2 cut(s) 1338, 1401
BseRI GAGGAG 4 cut(s) 461, 986, 1203, 2631
BseSI GKGCMC 2 cut(s) 1404, 2125
BseXI GCAGC 4 cut(s) 262, 394, 922, 1929
BsgI GTGCAG 3 cut(s) 1928, 2165, 2882
Bsh1236I CGCG 1 cut(s) 1889
Bsh1285I CGRYCG 3 cut(s) 247, 2045, 2851
BshFI GGCC 8 cut(s) 396, 874, 1437, 1818, 2361, 2825, 2892, 3066
BshNI GGYRCC 1 cut(s) 2871
BsiEI CGRYCG 3 cut(s) 247, 2045, 2851
BsiHKAI GWGCWC 4 cut(s) 1404, 2125, 2443, 2631
BsiHKCI CYCGRG 1 cut(s) 1841
BsiSI CCGG 6 cut(s) 260, 302, 333, 2362, 2693, 2875
BslFI GGGAC 7 cut(s) 865, 1105, 1215, 1642, 1886, 2163, 3039
BslI CCNNNNNNNGG 7 cut(s) 99, 1129, 1510, 1909, 1910, 2290, 2748
BsmAI GTCTC 3 cut(s) 452, 550, 2784
BsmBI CGTCTC 1 cut(s) 550
BsmFI GGGAC 7 cut(s) 865, 1105, 1215, 1642, 1886, 2163, 3039
BsmI GAATGC 2 cut(s) 664, 732
BsnI GGCC 8 cut(s) 396, 874, 1437, 1818, 2361, 2825, 2892, 3066
BsoBI CYCGRG 1 cut(s) 1841
Bsp1286I GDGCHC 4 cut(s) 1404, 2125, 2443, 2631
Bsp1407I TGTACA 2 cut(s) 1028, 1543
BspACI CCGC 6 cut(s) 299, 1123, 1850, 1875, 1889, 2731
BspANI GGCC 8 cut(s) 396, 874, 1437, 1818, 2361, 2825, 2892, 3066
BspCNI CTCAG 6 cut(s) 99, 271, 436, 1255, 1936, 2977
BspFNI CGCG 1 cut(s) 1889
BspHI TCATGA 1 cut(s) 31
BspLI GGNNCC 5 cut(s) 450, 873, 1901, 1902, 2873
BspMAI CTGCAG 2 cut(s) 2572, 2832
BspPI GGATC 7 cut(s) 1293, 1661, 1727, 2043, 2319, 2813, 2975
BspQI GCTCTTC 1 cut(s) 168
BspT107I GGYRCC 1 cut(s) 2871
BspTI CTTAAG 1 cut(s) 1948
BsrDI GCAATG 4 cut(s) 220, 1573, 1696, 2740
BsrFI RCCGGY 2 cut(s) 301, 2361
BsrGI TGTACA 2 cut(s) 1028, 1543
BsrI ACTGG 2 cut(s) 1338, 1401
BssAI RCCGGY 2 cut(s) 301, 2361
BssECI CCNNGG 4 cut(s) 875, 1137, 1432, 1588
BssSI CACGAG 1 cut(s) 912
BssT1I CCWWGG 3 cut(s) 875, 1432, 1588
Bst2BI CACGAG 1 cut(s) 912
Bst2UI CCWGG 7 cut(s) 128, 200, 1089, 1138, 1295, 1552, 2938
Bst4CI ACNGT 6 cut(s) 467, 822, 1214, 1363, 1469, 1612
Bst6I CTCTTC 3 cut(s) 135, 168, 1107
BstAFI CTTAAG 1 cut(s) 1948
BstAPI GCANNNNNTGC 1 cut(s) 2672
BstAUI TGTACA 2 cut(s) 1028, 1543
BstBAI YACGTR 3 cut(s) 13, 512, 866
BstC8I GCNNGC 7 cut(s) 303, 1308, 1848, 1920, 2363, 2407, 2764
BstEII GGTNACC 2 cut(s) 2082, 2932
BstF5I GGATG 5 cut(s) 208, 1604, 2254, 2488, 2701
BstFNI CGCG 1 cut(s) 1889
BstHHI GCGC 1 cut(s) 1518
BstMAI GTCTC 3 cut(s) 452, 550, 2784
BstMCI CGRYCG 3 cut(s) 247, 2045, 2851
BstMWI GCNNNNNNNGC 5 cut(s) 962, 1016, 1513, 2672, 2903
BstNI CCWGG 7 cut(s) 128, 200, 1089, 1138, 1295, 1552, 2938
BstNSI RCATGY 6 cut(s) 1491, 1850, 1897, 2121, 2766, 2910
BstPAI GACNNNNGTC 1 cut(s) 2713
BstPI GGTNACC 2 cut(s) 2082, 2932
BstSCI CCNGG 8 cut(s) 126, 198, 332, 1087, 1136, 1293, 1550, 2936
BstSFI CTRYAG 3 cut(s) 1266, 2568, 2828
BstSLI GKGCMC 2 cut(s) 1404, 2125
BstUI CGCG 1 cut(s) 1889
BstV1I GCAGC 4 cut(s) 262, 394, 922, 1929
BstV2I GAAGAC 1 cut(s) 1920
BstX2I RGATCY 1 cut(s) 2035
BstXI CCANNNNNNTGG 2 cut(s) 1237, 1595
BstYI RGATCY 1 cut(s) 2035
BsuI GTATCC 1 cut(s) 1144
BsuRI GGCC 8 cut(s) 396, 874, 1437, 1818, 2361, 2825, 2892, 3066
BtrI CACGTC 2 cut(s) 882, 1795
BtsCI GGATG 5 cut(s) 208, 1604, 2254, 2488, 2701
BtsIMutI CAGTG 4 cut(s) 160, 1608, 2113, 2123
Cac8I GCNNGC 7 cut(s) 303, 1308, 1848, 1920, 2363, 2407, 2764
CaiI CAGNNNCTG 1 cut(s) 635
CciI TCATGA 1 cut(s) 31
CfoI GCGC 1 cut(s) 1518
Cfr10I RCCGGY 2 cut(s) 301, 2361
Cfr13I GGNCC 6 cut(s) 872, 1091, 1817, 1900, 2499, 2824
Csp6I GTAC 6 cut(s) 291, 1029, 1345, 1544, 2300, 2872
CviQI GTAC 6 cut(s) 291, 1029, 1345, 1544, 2300, 2872
DraI TTTAAA 1 cut(s) 1252
DrdI GACNNNNNNGTC 1 cut(s) 1898
DriI GACNNNNNGTC 1 cut(s) 465
DseDI GACNNNNNNGTC 1 cut(s) 1898
Eam1104I CTCTTC 3 cut(s) 135, 168, 1107
Eam1105I GACNNNNNGTC 1 cut(s) 465
EarI CTCTTC 3 cut(s) 135, 168, 1107
Eco130I CCWWGG 3 cut(s) 875, 1432, 1588
Eco147I AGGCCT 1 cut(s) 1437
Eco32I GATATC 2 cut(s) 1083, 2245
Eco47I GGWCC 3 cut(s) 1091, 1900, 2499
Eco57I CTGAAG 2 cut(s) 597, 1089
Eco72I CACGTG 1 cut(s) 512
Eco88I CYCGRG 1 cut(s) 1841
Eco91I GGTNACC 2 cut(s) 2082, 2932
EcoO109I RGGNCCY 2 cut(s) 872, 1900
EcoO65I GGTNACC 2 cut(s) 2082, 2932
EcoRI GAATTC 4 cut(s) 750, 1494, 1648, 2056
EcoRII CCWGG 7 cut(s) 126, 198, 1087, 1136, 1293, 1550, 2936
EcoRV GATATC 2 cut(s) 1083, 2245
EcoT14I CCWWGG 3 cut(s) 875, 1432, 1588
EcoT22I ATGCAT 3 cut(s) 799, 2908, 2918
ErhI CCWWGG 3 cut(s) 875, 1432, 1588
Esp3I CGTCTC 1 cut(s) 550
FalI AAGNNNNNCTT 8 cut(s) 165, 197, 675, 707, 1931, 1963, 2349, 2381
FaqI GGGAC 7 cut(s) 865, 1105, 1215, 1642, 1886, 2163, 3039
FauI CCCGC 1 cut(s) 1130
FauNDI CATATG 1 cut(s) 1045
FbaI TGATCA 1 cut(s) 1570
Fnu4HI GCNGC 4 cut(s) 276, 408, 936, 1943
FokI GGATG 5 cut(s) 215, 1611, 2241, 2495, 2708
Fsp4HI GCNGC 4 cut(s) 276, 408, 936, 1943
FspBI CTAG 7 cut(s) 99, 524, 624, 1439, 1499, 1790, 2141
GlaI GCGC 1 cut(s) 1517
GluI GCNGC 4 cut(s) 276, 408, 936, 1943
GsuI CTGGAG 2 cut(s) 1213, 2645
HaeIII GGCC 8 cut(s) 396, 874, 1437, 1818, 2361, 2825, 2892, 3066
HapII CCGG 6 cut(s) 260, 302, 333, 2362, 2693, 2875
HhaI GCGC 1 cut(s) 1518
Hin6I GCGC 1 cut(s) 1516
HinP1I GCGC 1 cut(s) 1516
HincII GTYRAC 1 cut(s) 1147
HindII GTYRAC 1 cut(s) 1147
HindIII AAGCTT 1 cut(s) 1916
HpaI GTTAAC 1 cut(s) 1147
HpaII CCGG 6 cut(s) 260, 302, 333, 2362, 2693, 2875
HphI GGTGA 8 cut(s) 188, 771, 961, 1526, 1604, 1675, 2807, 2926
Hpy166II GTNNAC 6 cut(s) 1031, 1147, 1402, 1418, 1427, 2123
Hpy8I GTNNAC 6 cut(s) 1031, 1147, 1402, 1418, 1427, 2123
Hpy99I CGWCG 1 cut(s) 2712
HpyAV CCTTC 7 cut(s) 538, 584, 993, 1113, 1178, 2351, 3001
HpyCH4III ACNGT 6 cut(s) 467, 822, 1214, 1363, 1469, 1612
HpyCH4IV ACGT 8 cut(s) 12, 511, 559, 844, 865, 881, 1794, 2710
HpyF10VI GCNNNNNNNGC 5 cut(s) 962, 1016, 1513, 2672, 2903
HpySE526I ACGT 8 cut(s) 12, 511, 559, 844, 865, 881, 1794, 2710
HspAI GCGC 1 cut(s) 1516
KflI GGGWCCC 1 cut(s) 1900
KpnI GGTACC 1 cut(s) 2875
KroI GCCGGC 2 cut(s) 301, 2361
KroNI GCCGGC 2 cut(s) 303, 2363
Ksp22I TGATCA 1 cut(s) 1570
KspAI GTTAAC 1 cut(s) 1147
LguI GCTCTTC 1 cut(s) 168
LmnI GCTCC 6 cut(s) 448, 503, 973, 1513, 2336, 2626
Lsp1109I GCAGC 4 cut(s) 262, 394, 922, 1929
LweI GCATC 4 cut(s) 690, 1753, 2263, 2314
MaeI CTAG 7 cut(s) 99, 524, 624, 1439, 1499, 1790, 2141
MaeII ACGT 8 cut(s) 12, 511, 559, 844, 865, 881, 1794, 2710
MaeIII GTNAC 4 cut(s) 919, 1836, 2082, 2932
MfeI CAATTG 3 cut(s) 536, 1508, 2784
MflI RGATCY 1 cut(s) 2035
MhlI GDGCHC 4 cut(s) 1404, 2125, 2443, 2631
MlyI GAGTC 5 cut(s) 44, 924, 1124, 1461, 1587
MmeI TCCRAC 3 cut(s) 2002, 2013, 2158
Mph1103I ATGCAT 3 cut(s) 799, 2908, 2918
MroNI GCCGGC 2 cut(s) 301, 2361
MroXI GAANNNNTTC 1 cut(s) 2097
MslI CAYNNNNRTG 4 cut(s) 201, 582, 1166, 2911
MspCI CTTAAG 1 cut(s) 1948
MspI CCGG 6 cut(s) 260, 302, 333, 2362, 2693, 2875
MspR9I CCNGG 8 cut(s) 128, 200, 334, 1089, 1138, 1295, 1552, 2938
MunI CAATTG 3 cut(s) 536, 1508, 2784
Mva1269I GAATGC 2 cut(s) 664, 732
MvaI CCWGG 7 cut(s) 128, 200, 1089, 1138, 1295, 1552, 2938
MvnI CGCG 1 cut(s) 1889
MwoI GCNNNNNNNGC 5 cut(s) 962, 1016, 1513, 2672, 2903
NaeI GCCGGC 2 cut(s) 303, 2363
NciI CCSGG 1 cut(s) 334
NdeI CATATG 1 cut(s) 1045
NgoMIV GCCGGC 2 cut(s) 301, 2361
NlaIV GGNNCC 5 cut(s) 450, 873, 1901, 1902, 2873
NmuCI GTSAC 2 cut(s) 1836, 2932
NsiI ATGCAT 3 cut(s) 799, 2908, 2918
NspI RCATGY 6 cut(s) 1491, 1850, 1897, 2121, 2766, 2910
PaeI GCATGC 2 cut(s) 1850, 2766
PagI TCATGA 1 cut(s) 31
PceI AGGCCT 1 cut(s) 1437
PciI ACATGT 3 cut(s) 1487, 1893, 2117
PciSI GCTCTTC 1 cut(s) 168
PctI GAATGC 2 cut(s) 664, 732
PdiI GCCGGC 2 cut(s) 303, 2363
PdmI GAANNNNTTC 1 cut(s) 2097
PfoI TCCNGGA 1 cut(s) 332
PkrI GCNGC 4 cut(s) 277, 409, 937, 1944
Ple19I CGATCG 2 cut(s) 2045, 2851
PleI GAGTC 5 cut(s) 44, 923, 1123, 1460, 1586
PmaCI CACGTG 1 cut(s) 512
PmlI CACGTG 1 cut(s) 512
PpsI GAGTC 5 cut(s) 44, 923, 1123, 1460, 1586
Ppu21I YACGTR 3 cut(s) 13, 512, 866
PpuMI RGGWCCY 1 cut(s) 1900
PscI ACATGT 3 cut(s) 1487, 1893, 2117
PshAI GACNNNNGTC 1 cut(s) 2713
PsiI TTATAA 2 cut(s) 1484, 1524
Psp5II RGGWCCY 1 cut(s) 1900
Psp6I CCWGG 7 cut(s) 126, 198, 1087, 1136, 1293, 1550, 2936
PspCI CACGTG 1 cut(s) 512
PspEI GGTNACC 2 cut(s) 2082, 2932
PspGI CCWGG 7 cut(s) 126, 198, 1087, 1136, 1293, 1550, 2936
PspN4I GGNNCC 5 cut(s) 450, 873, 1901, 1902, 2873
PspPI GGNCC 6 cut(s) 872, 1091, 1817, 1900, 2499, 2824
PspPPI RGGWCCY 1 cut(s) 1900
PstI CTGCAG 2 cut(s) 2572, 2832
PstNI CAGNNNCTG 1 cut(s) 635
PsuI RGATCY 1 cut(s) 2035
PvuI CGATCG 2 cut(s) 2045, 2851
RsaI GTAC 6 cut(s) 292, 1030, 1346, 1545, 2301, 2873
RsaNI GTAC 6 cut(s) 291, 1029, 1345, 1544, 2300, 2872
RseI CAYNNNNRTG 4 cut(s) 201, 582, 1166, 2911
SapI GCTCTTC 1 cut(s) 168
SatI GCNGC 4 cut(s) 276, 408, 936, 1943
Sau96I GGNCC 6 cut(s) 872, 1091, 1817, 1900, 2499, 2824
SbfI CCTGCAGG 1 cut(s) 2832
ScaI AGTACT 1 cut(s) 1346
SchI GAGTC 5 cut(s) 44, 924, 1124, 1461, 1587
ScrFI CCNGG 8 cut(s) 128, 200, 334, 1089, 1138, 1295, 1552, 2938
SdaI CCTGCAGG 1 cut(s) 2832
SduI GDGCHC 4 cut(s) 1404, 2125, 2443, 2631
SfaNI GCATC 4 cut(s) 690, 1753, 2263, 2314
SfcI CTRYAG 3 cut(s) 1266, 2568, 2828
SinI GGWCC 3 cut(s) 1091, 1900, 2499
SmiMI CAYNNNNRTG 4 cut(s) 201, 582, 1166, 2911
SmlI CTYRAG 4 cut(s) 326, 1754, 1907, 1948
SmoI CTYRAG 4 cut(s) 326, 1754, 1907, 1948
SphI GCATGC 2 cut(s) 1850, 2766
Sse8387I CCTGCAGG 1 cut(s) 2832
SseBI AGGCCT 1 cut(s) 1437
SsiI CCGC 6 cut(s) 299, 1123, 1850, 1875, 1889, 2731
SspMI CTAG 7 cut(s) 99, 524, 624, 1439, 1499, 1790, 2141
StuI AGGCCT 1 cut(s) 1437
StyD4I CCNGG 8 cut(s) 126, 198, 332, 1087, 1136, 1293, 1550, 2936
StyI CCWWGG 3 cut(s) 875, 1432, 1588
TaaI ACNGT 6 cut(s) 467, 822, 1214, 1363, 1469, 1612
TaiI ACGT 8 cut(s) 15, 514, 562, 847, 868, 884, 1797, 2713
TaqI TCGA 7 cut(s) 1195, 1218, 1455, 1761, 2314, 2532, 2857
TaqII GACCGA 1 cut(s) 233
TatI WGTACW 4 cut(s) 1028, 1344, 1543, 2299
TscAI CASTG 4 cut(s) 160, 1615, 2113, 2130
TseFI GTSAC 2 cut(s) 1836, 2932
TseI GCWGC 4 cut(s) 275, 407, 935, 1942
Tsp45I GTSAC 2 cut(s) 1836, 2932
TspGWI ACGGA 2 cut(s) 1011, 2788
TspRI CASTG 4 cut(s) 160, 1615, 2113, 2130
Vha464I CTTAAG 1 cut(s) 1948
VneI GTGCAC 2 cut(s) 1400, 2121
VpaK11BI GGWCC 3 cut(s) 1091, 1900, 2499
XapI RAATTY 9 cut(s) 750, 814, 1004, 1442, 1494, 1648, 2056, 2096, 2213
XbaI TCTAGA 1 cut(s) 1789
XceI RCATGY 6 cut(s) 1491, 1850, 1897, 2121, 2766, 2910
XcmI CCANNNNNNNNNTGG 2 cut(s) 124, 1378
XmnI GAANNNNTTC 1 cut(s) 2097
XspI CTAG 7 cut(s) 99, 524, 624, 1439, 1499, 1790, 2141
ZrmI AGTACT 1 cut(s) 1346
Zsp2I ATGCAT 3 cut(s) 799, 2908, 2918
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.