Rh7AG127000

C2 and GRAM domain-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
OG0011354
Physical Location & Seq
Reverse (-)
10000967 .. 10006398
5432 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7AG127000.1

Sequence Viewer

Length: 2946 bp
ATGAGGCTTTACGTGTATGTGATGGAAGCCCATGACTTGGTTGTGAAGGACTCTTGCTTTGTGGAGCTTCAGGTTGGGAAGCACAAGTCCAAGACTAGGATTTTGAGGAACACCAACAACCCTGCTTGGAATGAAGAGTTTGTGTTCAGGGTGTATGATATGAATGAGGAGCTACTTGTGTCTGTTTTTCACCAGGATGATGACTCTAATGGTCTGTTTAATGGGGCGGACTTAGTCGGCCGGGTTCGGATTCCGGTGGGGTCTGTTGCTGCTGAGAATAATAGTACCTTGCCGCCCGCATGGTATTCTTTTGAAAGGCCCAAGTCCGGGAAGTTCATCAATACAGATTCTGGAAAAATTCTTCTCACTCTATCGTTGCATGAAAAAGGCCATGATGGCGCTGCTAATGACCTCCCTTGTTTGCACTCAAATATAACTGAGGAGCCTAAAGAGATTGACAGTCCATTTGTATCATCTAATGGTGTCTTATGCTCCAAATCTCCATGTGGAAAGATTCCGGGACGAAAACAATTGATGAAGGCTCTTAGGAGACGTATGGACAGGCTTCTTCATAAGAATGATGAAGCTTCAAGAACTGATGATTCCTCAGAGCTGTCTAGTTCTGTATCTGACTATGAAGATTGCATGGAGGAACAGCATTCTAATTGTAGCTTTGAAAAGTCTCTTGAAATGATGCAGTCAAGTGAGAGCGAACAAAAAATGCCAGAGAATCTTCCGGGGGGAATTCTTATTGATCAGGCTTATGTTGTTTCACCAAGTGATCTTAATGCATCTCTTTTTACCCCAAATTCACAGTTTAGGATAGATTTAGCAGAACTGCAGGGGACAACAGATGTACATGAGGGGCCTTGGACATGGAAATCAGGAGAGACGTCGTGTTTAACACGGGTAGTTACCTACATAAATGCTGCAACAAAGTTGGTTAAAGCTGTTAAAGCTACTGAGGAGCAAACATATCTCACAGCAAACGGAAGGCAATTTGCTGTATTGTCAAGTGTTTGTACACCCGAAGTTCCATATGGAAGTTCATTCAAGGTTGAATTGCTTTTCAAGATATTGCCTGGACCAGAGCTACCTTCAGGGGAAGAATCTTCTCGCCTTGTGGTATCCTGGGAAGTTAACTTTCTCCATAGCACATTGATGAAAGGCATGATTGAAGGAGGAGTTCGACAGGGACTTGAGGACAGTTTCGAGCAGTTCTCCATCTTGATGGCTCAGAAGTTTAAAGTGCTGGATTCTACAGATTTGTCTGACAAGGATCATATCCTGGCTAATATGCAGGCAGGACACCAATCAGATTGGGAATTGGCAAAGGAATACTTCTGGAATATGACTGTTGTTTCCACTATTTTTATGGTTTTATATATCATGGTGCACATTTTACTTTGTGAACCAAGTAAACTCCAAGGCCTAGAATTTCATGGACTTGATTTGCCAGATAGTATCGGAGAGTTTATCACGTGTGGAATTCTAGTCCTTCAATTGGAGCGCATTTATAAGATGGTTCAACACTTTGTGCAAGCTAGGTTGCAACAAGGAAGTGATCATGGAGTCAAATCCCAAGGTGATGGATGGGTTCTCACTGTTGCCTTGATTGAAGGGACAAACCTAGCCACCTTGGATTCATCAGGGTTCTTTGATCCCTATGTGGTTTTCACCAGCAATGGTAAAACAAGAACAAGCTCTGTCAGGCTTCAAACTACTGAACCTCAATGGAACGGGCATGCTGAGATCAATTTTCTGAAACACTCAGCTACTGAACTCGCAGACATGTGGGTATCCCTTGAGGGAAAGCTTGCTCAGTCTTCTCAATCAAAGCTGCACTTGAGAATCTTTCTGGACAATAACAAAGGACTTGAAACAATTAAGGAGTATATGACCAAAATGGAAAAGGAGGTTGGAAAGAAGTTGGATCTCCGATCGCCTCATAGGAATTTTACATTTCAGAAATTGTTTGGGTTGCCACCAGAAGAATTTCTCGTCAGTGATTTTACATGTGCACTGAAAAGGAAAATGCCAGTGCAGGGCCGACTTTTTCTATCTGCAAGAATAGTCGGGTTTTATGCAAATTTGTTTGGACACAAAACAAAATTTTTCTTTCTTTGGGAGGATATTGAAGATATCCAAGAGCATCCTCCCTCCCTATCATCTGTGGGAAGCCCTTTGCTGGTCATTGTTTTGAAAAAGGATCGAGGTATTGATGCAAGGCATGGGGCAAAGTGCCAAGATGAGGAAGGCCGGCTTAGATTTTATTTCCAATCATTCTTGTCGTTCAGTTCAGCAAGCAGGATGATAGTGGGCTTGTGGAGAAAAAGAGCACTAAGTCCAGATCAGAAAGCACAAATTGCTGAAGATCTGGATGATCATGAAGAAAGGTCCAAGATGCTTGAAGATACTGAATCCATACTCAATCTTGAAGATACAAGGATGTCTAAAGTTTATACTGCAGAAATACCTGTGAATACAAAATCTTTGATGGAAATGTTCAATGGAGGAAAGCTGGAGCACAAAATTATGGGGAAGTCAGGTTGTCTTAACTATGCAACTACTGCATGGGAACCTATAAAGCCAAATGTCTTTGAGCGACGTTTGTCTTATAGATTCAACCGCAATGTTTCCATCTTTGGCGGAGAGGTGGCATGCAGACAACGAAAGTCTCCAAATGCAAATGGTGAGGGATGGATCATCGATGAAGTTATGGCCCTGTACGGTGTTCCATTTGGCGATCATTTTCGGGTTCAGTTAAGGTACCGGATTGAGAAATCTGCCCTTGCTCATAATGCATGTAAATGCAATGTCTATGTCAGGGTCACCTGGCTCAAGAGCACGATGTTTCTGGAAAGAATCAAACACAACATAACTGAGAAGTTTGCTCATAGACTGAAGGATATATTTGAAATGGTAGAGCGAGAGAGATTCTCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0012505 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044444 GO:0044464
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
C2 DUF4782 GRAM

Protein Analysis

981

Amino Acids

111.36

Weight (kDa)

6.12

Isoelectric Point (pI)

48.27

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
C2 PF00168 2 - 102 8.6e-18 C2 domain
VASt PF16016 250 - 399 7.3e-29 VAD1 Analog of StAR-related lipid transfer domain
C2 PF00168 533 - 586 7e-06 C2 domain
GRAM PF02893 655 - 745 1.5e-16 GRAM domain
VASt PF16016 820 - 961 1.1e-23 VAD1 Analog of StAR-related lipid transfer domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0011354)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G50170
fragaria_vesca FvH4_5g06260 FvH4_5g06260 FvH4_5g06260
malus_domestica MD06G1166100.v1.1
prunus_persica Prupe.5G166000_v2.0.a1
pyrus_communis pycom06g14860
rosa_chinensis RchiOBHm_Chr7g0192601
rosa_laevigata RLG00000004348
rosa_multiflora Rmu_sc0004161.1_g000002
rosa_roxburghii Rroxscaffold_3G00262850
rosa_rugosa Rorug07G0002600 Rorug07G0002700 Rorug07G0002800
rosa_samantha Rh7AG127000 Rh7BG129600 Rh7CG131100 Rh7CG132000 Rh7DG130600
rosa_wichuraiana Rw7G010940

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1518
AatII GACGTC 1 cut(s) 896
Acc65I GGTACC 1 cut(s) 2769
AccB1I GGYRCC 1 cut(s) 2769
AccB7I CCANNNNNTGG 1 cut(s) 37
AciI CCGC 5 cut(s) 227, 293, 297, 2629, 2649
AclWI GGATC 5 cut(s) 1287, 1655, 1941, 2217, 2711
AcoI YGGCCR 1 cut(s) 238
AcsI RAATTY 9 cut(s) 357, 744, 808, 1436, 1488, 1954, 1994, 2089, 2111
AcuI CTGAAG 4 cut(s) 53, 1083, 2391, 2924
AcvI CACGTG 1 cut(s) 1482
AcyI GRCGYC 1 cut(s) 893
AdeI CACNNNGTG 2 cut(s) 779, 1537
AfaI GTAC 5 cut(s) 286, 858, 1024, 2729, 2771
AfiI CCNNNNNNNGG 8 cut(s) 37, 96, 326, 327, 1504, 2045, 2188, 2251
AflIII ACRYGT 4 cut(s) 12, 1481, 1791, 2015
AjnI CCWGG 5 cut(s) 192, 1081, 1130, 1287, 2834
AjuI GAANNNNNNNTTGG 2 cut(s) 1902, 1934
Alw21I GWGCWC 5 cut(s) 1398, 2023, 2341, 2529, 2849
Alw26I GTCTC 4 cut(s) 544, 687, 884, 2682
Alw44I GTGCAC 2 cut(s) 1394, 2019
AlwI GGATC 5 cut(s) 1287, 1655, 1941, 2217, 2711
AlwNI CAGNNNCTG 2 cut(s) 350, 1778
AoxI GGCC 8 cut(s) 238, 317, 388, 866, 1429, 2047, 2257, 2721
ApaLI GTGCAC 2 cut(s) 1394, 2019
ApeKI GCWGC 4 cut(s) 269, 401, 929, 1840
ApoI RAATTY 9 cut(s) 357, 744, 808, 1436, 1488, 1954, 1994, 2089, 2111
ArsI GACNNNNNNTTYG 6 cut(s) 41, 73, 85, 117, 449, 481
Asp700I GAANNNNTTC 1 cut(s) 1995
Asp718I GGTACC 1 cut(s) 2769
AspLEI GCGC 2 cut(s) 401, 1512
AspS9I GGNCC 6 cut(s) 318, 866, 1085, 2047, 2397, 2722
AsuC2I CCSGG 4 cut(s) 242, 328, 519, 738
AsuHPI GGTGA 6 cut(s) 182, 765, 1598, 1669, 2705, 2824
AvaII GGWCC 2 cut(s) 1085, 2397
BaeGI GKGCMC 2 cut(s) 1398, 2023
BanI GGYRCC 1 cut(s) 2769
BbrPI CACGTG 1 cut(s) 1482
BbsI GAAGAC 1 cut(s) 1818
Bbv12I GWGCWC 5 cut(s) 1398, 2023, 2341, 2529, 2849
BbvI GCAGC 4 cut(s) 256, 388, 916, 1827
BciT130I CCWGG 5 cut(s) 194, 1083, 1132, 1289, 2836
BciVI GTATCC 2 cut(s) 1138, 1810
BclI TGATCA 3 cut(s) 754, 1564, 2383
BcnI CCSGG 4 cut(s) 242, 328, 519, 738
BcoDI GTCTC 4 cut(s) 544, 687, 884, 2682
BfaI CTAG 6 cut(s) 96, 618, 1433, 1493, 1545, 1631
BfmI CTRYAG 3 cut(s) 839, 1260, 2466
BfoI RGCGCY 1 cut(s) 402
BfuI GTATCC 2 cut(s) 1138, 1810
BglI GCCNNNNNGGC 1 cut(s) 396
BglII AGATCT 1 cut(s) 2374
BisI GCNGC 5 cut(s) 270, 293, 402, 930, 1841
BlsI GCNGC 5 cut(s) 271, 294, 403, 931, 1842
Bme1390I CCNGG 9 cut(s) 194, 242, 328, 519, 738, 1083, 1132, 1289, 2836
Bme18I GGWCC 2 cut(s) 1085, 2397
BmgT120I GGNCC 6 cut(s) 318, 866, 1085, 2047, 2397, 2722
BmiI GGNNCC 4 cut(s) 444, 867, 2580, 2771
BmrFI CCNGG 9 cut(s) 194, 242, 328, 519, 738, 1083, 1132, 1289, 2836
BmsI GCATC 5 cut(s) 684, 800, 2161, 2212, 2394
BoxI GACNNNNGTC 1 cut(s) 2611
BpiI GAAGAC 1 cut(s) 1818
BplI GAGNNNNNCTC 3 cut(s) 1205, 1237, 2924
BpmI CTGGAG 1 cut(s) 2543
BpuEI CTTGAG 4 cut(s) 1220, 1826, 1867, 2825
BpuMI CCSGG 4 cut(s) 242, 328, 519, 738
Bsa29I ATCGAT 1 cut(s) 2709
BsaAI YACGTR 2 cut(s) 13, 1482
BsaHI GRCGYC 1 cut(s) 893
BsaJI CCNNGG 6 cut(s) 737, 869, 1131, 1426, 1582, 1638
BsaWI WCCGGW 2 cut(s) 253, 2772
Bsc4I CCNNNNNNNGG 8 cut(s) 37, 96, 326, 327, 1504, 2045, 2188, 2251
Bse118I RCCGGY 1 cut(s) 2259
Bse1I ACTGG 1 cut(s) 2039
Bse3DI GCAATG 3 cut(s) 1690, 2638, 2821
BseBI CCWGG 5 cut(s) 194, 1083, 1132, 1289, 2836
BseCI ATCGAT 1 cut(s) 2709
BseDI CCNNGG 6 cut(s) 737, 869, 1131, 1426, 1582, 1638
BseGI GGATG 7 cut(s) 202, 1598, 2152, 2316, 2386, 2454, 2705
BseLI CCNNNNNNNGG 8 cut(s) 37, 96, 326, 327, 1504, 2045, 2188, 2251
BseMI GCAATG 3 cut(s) 1690, 2638, 2821
BseMII CTCAG 9 cut(s) 264, 429, 621, 954, 1250, 1740, 1785, 1835, 2874
BseNI ACTGG 1 cut(s) 2039
BseRI GAGGAG 4 cut(s) 182, 455, 980, 1197
BseSI GKGCMC 2 cut(s) 1398, 2023
BseX3I CGGCCG 1 cut(s) 238
BseXI GCAGC 4 cut(s) 256, 388, 916, 1827
BsgI GTGCAG 2 cut(s) 1826, 2063
Bsh1285I CGRYCG 2 cut(s) 241, 1943
BshFI GGCC 8 cut(s) 240, 319, 390, 868, 1431, 2049, 2259, 2723
BshNI GGYRCC 1 cut(s) 2769
BshVI ATCGAT 1 cut(s) 2709
BsiEI CGRYCG 2 cut(s) 241, 1943
BsiHKAI GWGCWC 5 cut(s) 1398, 2023, 2341, 2529, 2849
BsiSI CCGG 7 cut(s) 241, 254, 327, 518, 737, 2260, 2773
BslFI GGGAC 4 cut(s) 534, 859, 1209, 1636
BslI CCNNNNNNNGG 8 cut(s) 37, 96, 326, 327, 1504, 2045, 2188, 2251
BsmAI GTCTC 4 cut(s) 544, 687, 884, 2682
BsmBI CGTCTC 2 cut(s) 544, 884
BsmFI GGGAC 4 cut(s) 534, 859, 1209, 1636
BsmI GAATGC 1 cut(s) 658
BsnI GGCC 8 cut(s) 240, 319, 390, 868, 1431, 2049, 2259, 2723
Bsp1286I GDGCHC 5 cut(s) 1398, 2023, 2341, 2529, 2849
Bsp1407I TGTACA 2 cut(s) 856, 1022
BspACI CCGC 5 cut(s) 227, 293, 297, 2629, 2649
BspANI GGCC 8 cut(s) 240, 319, 390, 868, 1431, 2049, 2259, 2723
BspCNI CTCAG 9 cut(s) 265, 430, 620, 955, 1249, 1741, 1784, 1834, 2875
BspDI ATCGAT 1 cut(s) 2709
BspHI TCATGA 1 cut(s) 2386
BspLI GGNNCC 4 cut(s) 444, 867, 2580, 2771
BspMAI CTGCAG 2 cut(s) 843, 2470
BspPI GGATC 5 cut(s) 1287, 1655, 1941, 2217, 2711
BspT107I GGYRCC 1 cut(s) 2769
BsrDI GCAATG 3 cut(s) 1690, 2638, 2821
BsrFI RCCGGY 1 cut(s) 2259
BsrGI TGTACA 2 cut(s) 856, 1022
BsrI ACTGG 1 cut(s) 2039
BssAI RCCGGY 1 cut(s) 2259
BssECI CCNNGG 6 cut(s) 737, 869, 1131, 1426, 1582, 1638
BssNI GRCGYC 1 cut(s) 893
BssT1I CCWWGG 4 cut(s) 869, 1426, 1582, 1638
Bst2UI CCWGG 5 cut(s) 194, 1083, 1132, 1289, 2836
Bst4CI ACNGT 6 cut(s) 461, 816, 1208, 1357, 1606, 2732
Bst6I CTCTTC 1 cut(s) 129
BstACI GRCGYC 1 cut(s) 893
BstAPI GCANNNNNTGC 2 cut(s) 2366, 2570
BstAUI TGTACA 2 cut(s) 856, 1022
BstBAI YACGTR 2 cut(s) 13, 1482
BstC8I GCNNGC 8 cut(s) 297, 1302, 1542, 1746, 1818, 2261, 2305, 2662
BstEII GGTNACC 1 cut(s) 2830
BstF5I GGATG 7 cut(s) 202, 1598, 2152, 2316, 2386, 2454, 2705
BstH2I RGCGCY 1 cut(s) 402
BstHHI GCGC 2 cut(s) 401, 1512
BstMAI GTCTC 4 cut(s) 544, 687, 884, 2682
BstMCI CGRYCG 2 cut(s) 241, 1943
BstMWI GCNNNNNNNGC 5 cut(s) 396, 956, 2366, 2570, 2801
BstNI CCWGG 5 cut(s) 194, 1083, 1132, 1289, 2836
BstNSI RCATGY 5 cut(s) 1748, 1795, 2019, 2664, 2808
BstPAI GACNNNNGTC 1 cut(s) 2611
BstPI GGTNACC 1 cut(s) 2830
BstSCI CCNGG 9 cut(s) 192, 240, 326, 517, 736, 1081, 1130, 1287, 2834
BstSFI CTRYAG 3 cut(s) 839, 1260, 2466
BstSLI GKGCMC 2 cut(s) 1398, 2023
BstV1I GCAGC 4 cut(s) 256, 388, 916, 1827
BstV2I GAAGAC 1 cut(s) 1818
BstX2I RGATCY 2 cut(s) 1933, 2374
BstXI CCANNNNNNTGG 2 cut(s) 1231, 1589
BstYI RGATCY 2 cut(s) 1933, 2374
BstZI CGGCCG 1 cut(s) 238
Bsu15I ATCGAT 1 cut(s) 2709
BsuI GTATCC 2 cut(s) 1138, 1810
BsuRI GGCC 8 cut(s) 240, 319, 390, 868, 1431, 2049, 2259, 2723
BsuTUI ATCGAT 1 cut(s) 2709
BtsCI GGATG 7 cut(s) 202, 1598, 2152, 2316, 2386, 2454, 2705
BtsIMutI CAGTG 4 cut(s) 1602, 2011, 2021, 2046
Cac8I GCNNGC 8 cut(s) 297, 1302, 1542, 1746, 1818, 2261, 2305, 2662
CaiI CAGNNNCTG 2 cut(s) 350, 1778
CciI TCATGA 1 cut(s) 2386
CfoI GCGC 2 cut(s) 401, 1512
Cfr10I RCCGGY 1 cut(s) 2259
Cfr13I GGNCC 6 cut(s) 318, 866, 1085, 2047, 2397, 2722
ClaI ATCGAT 1 cut(s) 2709
Csp6I GTAC 5 cut(s) 285, 857, 1023, 2728, 2770
CviQI GTAC 5 cut(s) 285, 857, 1023, 2728, 2770
DraI TTTAAA 1 cut(s) 1246
DraIII CACNNNGTG 2 cut(s) 779, 1537
EaeI YGGCCR 1 cut(s) 238
EagI CGGCCG 1 cut(s) 238
Eam1104I CTCTTC 1 cut(s) 129
EarI CTCTTC 1 cut(s) 129
EciI GGCGGA 2 cut(s) 242, 2664
EclXI CGGCCG 1 cut(s) 238
Eco130I CCWWGG 4 cut(s) 869, 1426, 1582, 1638
Eco147I AGGCCT 1 cut(s) 1431
Eco32I GATATC 1 cut(s) 2143
Eco47I GGWCC 2 cut(s) 1085, 2397
Eco52I CGGCCG 1 cut(s) 238
Eco57I CTGAAG 4 cut(s) 53, 1083, 2391, 2924
Eco72I CACGTG 1 cut(s) 1482
Eco91I GGTNACC 1 cut(s) 2830
EcoO109I RGGNCCY 1 cut(s) 866
EcoO65I GGTNACC 1 cut(s) 2830
EcoRI GAATTC 2 cut(s) 744, 1488
EcoRII CCWGG 5 cut(s) 192, 1081, 1130, 1287, 2834
EcoRV GATATC 1 cut(s) 2143
EcoT14I CCWWGG 4 cut(s) 869, 1426, 1582, 1638
EcoT22I ATGCAT 2 cut(s) 793, 2806
ErhI CCWWGG 4 cut(s) 869, 1426, 1582, 1638
Esp3I CGTCTC 2 cut(s) 544, 884
FalI AAGNNNNNCTT 6 cut(s) 1325, 1357, 1829, 1861, 2247, 2279
FaqI GGGAC 4 cut(s) 534, 859, 1209, 1636
FauI CCCGC 1 cut(s) 304
FauNDI CATATG 1 cut(s) 1039
FbaI TGATCA 3 cut(s) 754, 1564, 2383
Fnu4HI GCNGC 5 cut(s) 270, 293, 402, 930, 1841
FokI GGATG 7 cut(s) 209, 1605, 2139, 2323, 2393, 2461, 2712
Fsp4HI GCNGC 5 cut(s) 270, 293, 402, 930, 1841
FspBI CTAG 6 cut(s) 96, 618, 1433, 1493, 1545, 1631
GlaI GCGC 2 cut(s) 400, 1511
GluI GCNGC 5 cut(s) 270, 293, 402, 930, 1841
GsuI CTGGAG 1 cut(s) 2543
HaeII RGCGCY 1 cut(s) 402
HaeIII GGCC 8 cut(s) 240, 319, 390, 868, 1431, 2049, 2259, 2723
HapII CCGG 7 cut(s) 241, 254, 327, 518, 737, 2260, 2773
HhaI GCGC 2 cut(s) 401, 1512
Hin1I GRCGYC 1 cut(s) 893
Hin6I GCGC 2 cut(s) 399, 1510
HinP1I GCGC 2 cut(s) 399, 1510
HincII GTYRAC 1 cut(s) 1141
HindII GTYRAC 1 cut(s) 1141
HindIII AAGCTT 2 cut(s) 585, 1814
HpaI GTTAAC 1 cut(s) 1141
HpaII CCGG 7 cut(s) 241, 254, 327, 518, 737, 2260, 2773
HphI GGTGA 6 cut(s) 182, 765, 1598, 1669, 2705, 2824
Hpy166II GTNNAC 6 cut(s) 1025, 1141, 1396, 1412, 1421, 2021
Hpy8I GTNNAC 6 cut(s) 1025, 1141, 1396, 1412, 1421, 2021
Hpy99I CGWCG 2 cut(s) 898, 2610
HpyAV CCTTC 9 cut(s) 40, 532, 987, 1107, 1172, 1508, 1613, 2249, 2899
HpyCH4III ACNGT 6 cut(s) 461, 816, 1208, 1357, 1606, 2732
HpyCH4IV ACGT 5 cut(s) 12, 553, 893, 1481, 2608
HpyF10VI GCNNNNNNNGC 5 cut(s) 396, 956, 2366, 2570, 2801
HpySE526I ACGT 5 cut(s) 12, 553, 893, 1481, 2608
Hsp92I GRCGYC 1 cut(s) 893
HspAI GCGC 2 cut(s) 399, 1510
KpnI GGTACC 1 cut(s) 2773
KroI GCCGGC 1 cut(s) 2259
KroNI GCCGGC 1 cut(s) 2261
Ksp22I TGATCA 3 cut(s) 754, 1564, 2383
KspAI GTTAAC 1 cut(s) 1141
LmnI GCTCC 7 cut(s) 64, 169, 442, 497, 967, 1507, 2524
Lsp1109I GCAGC 4 cut(s) 256, 388, 916, 1827
LweI GCATC 5 cut(s) 684, 800, 2161, 2212, 2394
MaeI CTAG 6 cut(s) 96, 618, 1433, 1493, 1545, 1631
MaeII ACGT 5 cut(s) 12, 553, 893, 1481, 2608
MaeIII GTNAC 2 cut(s) 913, 2830
MfeI CAATTG 2 cut(s) 530, 1502
MflI RGATCY 2 cut(s) 1933, 2374
MhlI GDGCHC 5 cut(s) 1398, 2023, 2341, 2529, 2849
MlyI GAGTC 3 cut(s) 44, 197, 1581
MmeI TCCRAC 2 cut(s) 1900, 1911
Mph1103I ATGCAT 2 cut(s) 793, 2806
MroNI GCCGGC 1 cut(s) 2259
MroXI GAANNNNTTC 1 cut(s) 1995
MslI CAYNNNNRTG 5 cut(s) 195, 576, 1160, 1229, 2809
MspI CCGG 7 cut(s) 241, 254, 327, 518, 737, 2260, 2773
MspR9I CCNGG 9 cut(s) 194, 242, 328, 519, 738, 1083, 1132, 1289, 2836
MunI CAATTG 2 cut(s) 530, 1502
Mva1269I GAATGC 1 cut(s) 658
MvaI CCWGG 5 cut(s) 194, 1083, 1132, 1289, 2836
MwoI GCNNNNNNNGC 5 cut(s) 396, 956, 2366, 2570, 2801
NaeI GCCGGC 1 cut(s) 2261
NciI CCSGG 4 cut(s) 242, 328, 519, 738
NdeI CATATG 1 cut(s) 1039
NgoMIV GCCGGC 1 cut(s) 2259
NlaIV GGNNCC 4 cut(s) 444, 867, 2580, 2771
NmuCI GTSAC 1 cut(s) 2830
NsiI ATGCAT 2 cut(s) 793, 2806
NspI RCATGY 5 cut(s) 1748, 1795, 2019, 2664, 2808
PaeI GCATGC 2 cut(s) 1748, 2664
PagI TCATGA 1 cut(s) 2386
PceI AGGCCT 1 cut(s) 1431
PciI ACATGT 2 cut(s) 1791, 2015
PctI GAATGC 1 cut(s) 658
PdiI GCCGGC 1 cut(s) 2261
PdmI GAANNNNTTC 1 cut(s) 1995
PflFI GACNNNGTC 1 cut(s) 233
PflMI CCANNNNNTGG 1 cut(s) 37
PfoI TCCNGGA 2 cut(s) 326, 517
PkrI GCNGC 5 cut(s) 271, 294, 403, 931, 1842
Ple19I CGATCG 1 cut(s) 1943
PleI GAGTC 3 cut(s) 44, 197, 1580
PmaCI CACGTG 1 cut(s) 1482
PmlI CACGTG 1 cut(s) 1482
PpsI GAGTC 3 cut(s) 44, 197, 1580
Ppu21I YACGTR 2 cut(s) 13, 1482
PscI ACATGT 2 cut(s) 1791, 2015
PshAI GACNNNNGTC 1 cut(s) 2611
PsiI TTATAA 1 cut(s) 1518
Psp6I CCWGG 5 cut(s) 192, 1081, 1130, 1287, 2834
PspCI CACGTG 1 cut(s) 1482
PspEI GGTNACC 1 cut(s) 2830
PspGI CCWGG 5 cut(s) 192, 1081, 1130, 1287, 2834
PspN4I GGNNCC 4 cut(s) 444, 867, 2580, 2771
PspPI GGNCC 6 cut(s) 318, 866, 1085, 2047, 2397, 2722
PstI CTGCAG 2 cut(s) 843, 2470
PstNI CAGNNNCTG 2 cut(s) 350, 1778
PsuI RGATCY 2 cut(s) 1933, 2374
PsyI GACNNNGTC 1 cut(s) 233
PvuI CGATCG 1 cut(s) 1943
RsaI GTAC 5 cut(s) 286, 858, 1024, 2729, 2771
RsaNI GTAC 5 cut(s) 285, 857, 1023, 2728, 2770
RseI CAYNNNNRTG 5 cut(s) 195, 576, 1160, 1229, 2809
SatI GCNGC 5 cut(s) 270, 293, 402, 930, 1841
Sau96I GGNCC 6 cut(s) 318, 866, 1085, 2047, 2397, 2722
SchI GAGTC 3 cut(s) 44, 197, 1581
ScrFI CCNGG 9 cut(s) 194, 242, 328, 519, 738, 1083, 1132, 1289, 2836
SduI GDGCHC 5 cut(s) 1398, 2023, 2341, 2529, 2849
SfaNI GCATC 5 cut(s) 684, 800, 2161, 2212, 2394
SfcI CTRYAG 3 cut(s) 839, 1260, 2466
SinI GGWCC 2 cut(s) 1085, 2397
SmiMI CAYNNNNRTG 5 cut(s) 195, 576, 1160, 1229, 2809
SmlI CTYRAG 4 cut(s) 1199, 1805, 1846, 2840
SmoI CTYRAG 4 cut(s) 1199, 1805, 1846, 2840
SphI GCATGC 2 cut(s) 1748, 2664
SseBI AGGCCT 1 cut(s) 1431
SsiI CCGC 5 cut(s) 227, 293, 297, 2629, 2649
SspMI CTAG 6 cut(s) 96, 618, 1433, 1493, 1545, 1631
StuI AGGCCT 1 cut(s) 1431
StyD4I CCNGG 9 cut(s) 192, 240, 326, 517, 736, 1081, 1130, 1287, 2834
StyI CCWWGG 4 cut(s) 869, 1426, 1582, 1638
TaaI ACNGT 6 cut(s) 461, 816, 1208, 1357, 1606, 2732
TaiI ACGT 5 cut(s) 15, 556, 896, 1484, 2611
TaqI TCGA 4 cut(s) 1189, 1212, 2212, 2709
TatI WGTACW 2 cut(s) 856, 1022
TauI GCSGC 1 cut(s) 295
TscAI CASTG 4 cut(s) 1609, 2011, 2028, 2046
TseFI GTSAC 1 cut(s) 2830
TseI GCWGC 4 cut(s) 269, 401, 929, 1840
Tsp45I GTSAC 1 cut(s) 2830
TspGWI ACGGA 1 cut(s) 1005
TspRI CASTG 4 cut(s) 1609, 2011, 2028, 2046
Tth111I GACNNNGTC 1 cut(s) 233
Van91I CCANNNNNTGG 1 cut(s) 37
VneI GTGCAC 2 cut(s) 1394, 2019
VpaK11BI GGWCC 2 cut(s) 1085, 2397
XapI RAATTY 9 cut(s) 357, 744, 808, 1436, 1488, 1954, 1994, 2089, 2111
XceI RCATGY 5 cut(s) 1748, 1795, 2019, 2664, 2808
XcmI CCANNNNNNNNNTGG 1 cut(s) 1372
XmnI GAANNNNTTC 1 cut(s) 1995
XspI CTAG 6 cut(s) 96, 618, 1433, 1493, 1545, 1631
ZraI GACGTC 1 cut(s) 894
Zsp2I ATGCAT 2 cut(s) 793, 2806
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.