Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb5

Orthogroup ID

OG0008594

Physical Location & Seq

Genomic Coordinates Forward (+)

5903188 .. 5907916

Gene Structure 4729 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_5g10350.t1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2142 bp

ATGGCGGTGTTGTCGATGGAGTCGCTGCCGCTCGGATTCCGGTTCCGGCCGACGGACGAGGAGCTCATCAACCACTACCTACGTCTCAAGATCAACGGCCGTCATTCAGAGGTCCAAGTCATCCCCGATATCGACGTCTGTAAATGGGAGCCCTGGGATTTGCCTAAGTTGTCGATGATAAAGTCGGATGATCAAGAATGGTTCTTCTTCTGCCCGCGTGACAGGAAGTATCCGAATGGTCATCGTTCCAACAGAGCCACGGATGCAGGCTACTGGAAGGCGACCGGGAAGGACCGCACGATTAAGTCACGCCGGTTCAAGTCTGCTGCGAATAGCACAGGCTTGGTTGGGATGAAGAAGACGTTGGTTTTCTACAAAGGCCGTGCTCCCAAGGGCGAGCGCACCAGCTGGATCATGCATGAGTATCGTCCTACTCAGAAGGAGCTTGATGGTACCGCTCCTGGCCAGTGTGCCTATGTTCTGTGTCGCCTGTTCCATAAACCAGAGGAGAAGGCTGAAGTTCTGAAGTATGATGAAGTCGACCAGCCTGGCTTATCTCCTACCACCTCTCCTGATGAGACATCCTCAGATGTAGTTCAGGAATCACCTACTCCAGATATGAAAGGTGGAAAGGAATCAGAAGGTATATCGCAGTGGAATGACAGTTTTGACCACATGACCCCTGATACTGTGACTATGCCACCTATTGACAGTTATATGGCTTCTGATGTGGAAGTGTCTGGACCAGAAGAAACAATCTTTTCTGGAGAAATGAGCTTCTTTGAGCCCACATTTGACTGCAAAATCTTCTCACCATCGCATACACCATTCGATGCAGAACTGGATTATGTCGGTTCGCCTCTTGAGTTTGGCAATCATAACAATGGATTGTACTTTCAGGATGGCACATGTGAACAGGATGTATACCTCCCAGAGGTGTTCGATGAGGTTGGCAATAAAAATTATGAAAGCTCCCTCGAGGAGAGTCAGAAGAACTTGGTTGTGGGCAGTGAAGCCTATCTATCTGATTCATTCATGTTGCAAGACATACCACCAGAAAACCCGTGGCTAAATGGTGCATGGGGTTACCCAGACGCCAAAGCCGCCCAGCATAATCTGGACACTGGAGCTCGTGGCTTGTCCAATGAGCAGTTTGATATTGAGGATCTGCTACGGAAAACCTCATTTGGTGCTTACCAAGCTGAAGCTCCAGCATCTCTTTATGACCATAAACCTGCCATGGAAAATATTGGATATTCTGGTTACTCATATCCTGATTCTGCTGTGTCAAATATTCTGGATGGATCTACCCGTTTGAATGATGTCGATAACCATAGCAGTGATCAAGTTGGTGGACTAAAAATCAAAATCAGGTCCCGCCTTCCTCAAGAACGACCAAATTCGAACTTTGTGGATCAGGGTTCTGCCAACAGAAGACTTCGTTTAGCAGTTCGTAACCATACAAGGGTTTCAAACCACAACAAAGAAGAAGATGAAGGACATTCAACTATCACTGAGGCCAGAGAAGCTGGACAGAGTACTTCTGATGAATGGGAGAAAGTTCATGCAATAGATGATGAGGAAGAAGTAACCAGTAGGGATTACTCTGTTAACAAGGATTATGATCTTGGTGGTAAAAATGAAATTAGTTGTGAAACCAACCAACCTCCAGAGCCATCAAACTCAGGCAAACCCGTAACTCGTGGCATGGCTACAAGAATCCGCTTGATGGTGAATGGTTCACCTGGGTCAGTTGCCAATAGTAATGTGAGTGATACAAAGTATGGGCAAGAAGACAAAGTGAAATCTAGTATTACTGAGGCCAGCGAAACCAGAGAGGAAAGTCCTCGCCTCAACGAGCAGGAGGTAAAGTGTCATCCAATGAAGTTGGATGCGAACCAGAAAATTGCTGAAGAACCCTCAACTTCCCTGGTTGACGAGAACAAGAAAACCATTGAAGAAGCCGCAACAAAGACCAGGTCAAGGACCGGAGGGGATGATAATTCGTTACACAGCGGCCATATTGGGATGTCAGTGCCATCTAAAAATCGTCACCTGAATACTGTGTTCATCATTACAGTTGGGATCCCCTTAGTTCTAACCATGTTCGTAGCTTTTAGTGGAATATGGATATCCCATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001067 GO:0002831 GO:0002833 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005783 GO:0005789 GO:0005886 GO:0006355 GO:0006950 GO:0006970 GO:0008150 GO:0009314 GO:0009416 GO:0009628 GO:0009642 GO:0009644 GO:0009889 GO:0009890 GO:0009891 GO:0009892 GO:0009893 GO:0009962 GO:0009987 GO:0010468 GO:0010556 GO:0010557 GO:0010558 GO:0010604 GO:0010605 GO:0010628 GO:0010629 GO:0012505 GO:0016020 GO:0019219 GO:0019222 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031328 GO:0031347 GO:0031349 GO:0031984 GO:0032101 GO:0032103 GO:0033554 GO:0042175 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043900 GO:0043902 GO:0044212 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0045892 GO:0045893 GO:0045934 GO:0045935 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048583 GO:0048584 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051173 GO:0051252 GO:0051253 GO:0051254 GO:0051716 GO:0060255 GO:0065007 GO:0071214 GO:0071470 GO:0071944 GO:0080090 GO:0080134 GO:0097159 GO:0098827 GO:0104004 GO:0140110 GO:1900424 GO:1900426 GO:1901363 GO:1902679 GO:1902680 GO:1903506 GO:1903507 GO:1903508 GO:2000112 GO:2000113 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

NAM

Protein Analysis

714

Amino Acids

79.78

Weight (kDa)

5.03

Isoelectric Point (pI)

47.23

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NAM	PF02365	10 - 143	2.4e-47	No apical meristem (NAM) protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Orthologous Genes (Group: OG0008594)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G33060 AT1G33060 AT4G35580 AT4G35580 AT4G35580
fragaria_vesca	FvH4_5g10350 FvH4_5g10350
malus_domestica	MD00G1096600.v1.1 MD06G1124800.v1.1
prunus_persica	Prupe.5G135400_v2.0.a1 Prupe.5G135400_v2.0.a1
pyrus_communis	pycom06g11540 pycom14g11690
rosa_chinensis	RchiOBHm_Chr7g0187871
rosa_laevigata	RLG00000004751
rosa_multiflora	Rmu_ssc0000122.1_g000021
rosa_roxburghii	Rroxscaffold_3G00266990
rosa_rugosa	Rorug06G0484900
rosa_samantha	Rh7AG090100 Rh7BG091700 Rh7CG090800 Rh7DG092500
rosa_wichuraiana	Rw7G007780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	138
AbsI	CCTCGAGG	1 cut(s)	977
Acc36I	ACCTGC	1 cut(s)	1243
Acc65I	GGTACC	1 cut(s)	452
AccB1I	GGYRCC	1 cut(s)	452
AccBSI	CCGCTC	2 cut(s)	31, 458
AccI	GTMKAC	2 cut(s)	540, 924
AccII	CGCG	1 cut(s)	217
AclWI	GGATC	6 cut(s)	419, 1173, 1312, 1422, 2080, 2093
AcoI	YGGCCR	4 cut(s)	47, 97, 463, 2017
AcsI	RAATTY	1 cut(s)	1399
AcuI	CTGAAG	4 cut(s)	537, 545, 1224, 1932
AcyI	GRCGYC	2 cut(s)	135, 1095
AfaI	GTAC	3 cut(s)	454, 893, 1540
AfiI	CCNNNNNNNGG	5 cut(s)	52, 934, 1465, 1729, 1983
AflIII	ACRYGT	1 cut(s)	908
AgsI	TTSAA	5 cut(s)	319, 1318, 1473, 1506, 1958
AjnI	CCWGG	6 cut(s)	152, 460, 547, 1744, 1929, 1976
AjuI	GAANNNNNNNTTGG	2 cut(s)	347, 379
Alw21I	GWGCWC	3 cut(s)	66, 388, 1132
Alw26I	GTCTC	2 cut(s)	89, 572
AlwI	GGATC	6 cut(s)	419, 1173, 1312, 1422, 2080, 2093
Ama87I	CYCGRG	1 cut(s)	977
AoxI	GGCC	7 cut(s)	47, 97, 379, 463, 1518, 1821, 2017
ApeKI	GCWGC	2 cut(s)	25, 326
ApoI	RAATTY	1 cut(s)	1399
ArsI	GACNNNNNNTTYG	2 cut(s)	1964, 1996
Asp718I	GGTACC	1 cut(s)	452
AspLEI	GCGC	1 cut(s)	402
AspS9I	GGNCC	5 cut(s)	112, 292, 743, 1374, 1986
AsuC2I	CCSGG	1 cut(s)	286
AsuHPI	GGTGA	5 cut(s)	597, 804, 1734, 1744, 2045
AsuII	TTCGAA	1 cut(s)	1403
AvaI	CYCGRG	1 cut(s)	977
AvaII	GGWCC	5 cut(s)	112, 292, 743, 1374, 1986
BalI	TGGCCA	1 cut(s)	465
BamHI	GGATCC	1 cut(s)	2085
BanI	GGYRCC	1 cut(s)	452
BanII	GRGCYC	4 cut(s)	66, 153, 789, 1132
BauI	CACGAG	2 cut(s)	1131, 1701
BbsI	GAAGAC	3 cut(s)	365, 1441, 1800
Bbv12I	GWGCWC	3 cut(s)	66, 388, 1132
BbvI	GCAGC	2 cut(s)	12, 313
BccI	CCATC	8 cut(s)	10, 443, 823, 896, 1295, 1684, 1723, 2047
BceAI	ACGGC	3 cut(s)	84, 112, 366
BcgI	CGANNNNNNTGC	2 cut(s)	407, 441
BciT130I	CCWGG	6 cut(s)	154, 462, 549, 1746, 1931, 1978
BciVI	GTATCC	1 cut(s)	240
BclI	TGATCA	2 cut(s)	190, 1342
BcnI	CCSGG	1 cut(s)	286
BcoDI	GTCTC	2 cut(s)	89, 572
BfaI	CTAG	1 cut(s)	1809
BfuAI	ACCTGC	1 cut(s)	1243
BfuI	GTATCC	1 cut(s)	240
BisI	GCNGC	6 cut(s)	26, 29, 327, 1104, 1965, 2017
BlsI	GCNGC	6 cut(s)	27, 30, 328, 1105, 1966, 2018
BmcAI	AGTACT	1 cut(s)	1540
Bme1390I	CCNGG	7 cut(s)	154, 286, 462, 549, 1746, 1931, 1978
Bme18I	GGWCC	5 cut(s)	112, 292, 743, 1374, 1986
BmeT110I	CYCGRG	1 cut(s)	977
BmgT120I	GGNCC	5 cut(s)	112, 292, 743, 1374, 1986
BmiI	GGNNCC	5 cut(s)	44, 150, 454, 1376, 2087
BmrFI	CCNGG	7 cut(s)	154, 286, 462, 549, 1746, 1931, 1978
BmsI	GCATC	4 cut(s)	253, 823, 1223, 1882
BpiI	GAAGAC	3 cut(s)	365, 1441, 1800
BplI	GAGNNNNNCTC	2 cut(s)	569, 601
BpmI	CTGGAG	5 cut(s)	597, 786, 1146, 1194, 1653
Bpu14I	TTCGAA	1 cut(s)	1403
BpuEI	CTTGAG	3 cut(s)	71, 884, 1371
BpuMI	CCSGG	1 cut(s)	286
BsaBI	GATNNNNATC	1 cut(s)	1623
BsaHI	GRCGYC	2 cut(s)	135, 1095
BsaJI	CCNNGG	8 cut(s)	152, 153, 258, 390, 1064, 1239, 1745, 1929
BsaWI	WCCGGW	2 cut(s)	39, 1988
BsaXI	ACNNNNNCTCC	4 cut(s)	553, 583, 1856, 1886
Bsc4I	CCNNNNNNNGG	5 cut(s)	52, 934, 1465, 1729, 1983
Bse118I	RCCGGY	1 cut(s)	312
Bse1I	ACTGG	5 cut(s)	278, 466, 846, 1129, 1593
Bse8I	GATNNNNATC	1 cut(s)	1623
BseBI	CCWGG	6 cut(s)	154, 462, 549, 1746, 1931, 1978
BseDI	CCNNGG	8 cut(s)	152, 153, 258, 390, 1064, 1239, 1745, 1929
BseJI	GATNNNNATC	1 cut(s)	1623
BseLI	CCNNNNNNNGG	5 cut(s)	52, 934, 1465, 1729, 1983
BseMII	CTCAG	5 cut(s)	449, 600, 1506, 1698, 1809
BseNI	ACTGG	5 cut(s)	278, 466, 846, 1129, 1593
BseRI	GAGGAG	3 cut(s)	74, 521, 995
BseX3I	CGGCCG	2 cut(s)	47, 97
BseXI	GCAGC	2 cut(s)	12, 313
BseYI	CCCAGC	1 cut(s)	1107
Bsh1236I	CGCG	1 cut(s)	217
Bsh1285I	CGRYCG	3 cut(s)	50, 100, 285
BshFI	GGCC	7 cut(s)	49, 99, 381, 465, 1520, 1823, 2019
BshNI	GGYRCC	1 cut(s)	452
BsiEI	CGRYCG	3 cut(s)	50, 100, 285
BsiHKAI	GWGCWC	3 cut(s)	66, 388, 1132
BsiHKCI	CYCGRG	1 cut(s)	977
BsiSI	CCGG	5 cut(s)	40, 46, 285, 313, 1989
BslFI	GGGAC	1 cut(s)	1360
BslI	CCNNNNNNNGG	5 cut(s)	52, 934, 1465, 1729, 1983
BsmAI	GTCTC	2 cut(s)	89, 572
BsmBI	CGTCTC	1 cut(s)	89
BsmFI	GGGAC	1 cut(s)	1360
BsnI	GGCC	7 cut(s)	49, 99, 381, 465, 1520, 1823, 2019
BsoBI	CYCGRG	1 cut(s)	977
Bsp119I	TTCGAA	1 cut(s)	1403
Bsp1286I	GDGCHC	5 cut(s)	66, 153, 388, 789, 1132
Bsp143I	GATC	9 cut(s)	90, 190, 411, 1165, 1304, 1342, 1414, 1624, 2085
Bsp19I	CCATGG	1 cut(s)	1239
BspANI	GGCC	7 cut(s)	49, 99, 381, 465, 1520, 1823, 2019
BspCNI	CTCAG	5 cut(s)	448, 599, 1507, 1697, 1810
BspFNI	CGCG	1 cut(s)	217
BspLI	GGNNCC	5 cut(s)	44, 150, 454, 1376, 2087
BspMI	ACCTGC	1 cut(s)	1243
BspPI	GGATC	6 cut(s)	419, 1173, 1312, 1422, 2080, 2093
BspT104I	TTCGAA	1 cut(s)	1403
BspT107I	GGYRCC	1 cut(s)	452
BsrBI	CCGCTC	2 cut(s)	31, 458
BsrFI	RCCGGY	1 cut(s)	312
BsrI	ACTGG	5 cut(s)	278, 466, 846, 1129, 1593
BssAI	RCCGGY	1 cut(s)	312
BssECI	CCNNGG	8 cut(s)	152, 153, 258, 390, 1064, 1239, 1745, 1929
BssMI	GATC	9 cut(s)	90, 190, 411, 1165, 1304, 1342, 1414, 1624, 2085
BssNAI	GTATAC	1 cut(s)	925
BssNI	GRCGYC	2 cut(s)	135, 1095
BssSI	CACGAG	2 cut(s)	1131, 1701
BssT1I	CCWWGG	2 cut(s)	390, 1239
Bst1107I	GTATAC	1 cut(s)	925
Bst2BI	CACGAG	2 cut(s)	1131, 1701
Bst2UI	CCWGG	6 cut(s)	154, 462, 549, 1746, 1931, 1978
Bst4CI	ACNGT	5 cut(s)	665, 691, 713, 2065, 2080
BstACI	GRCGYC	2 cut(s)	135, 1095
BstBI	TTCGAA	1 cut(s)	1403
BstC8I	GCNNGC	4 cut(s)	215, 268, 398, 1825
BstDEI	CTNAG	7 cut(s)	165, 435, 586, 1515, 1684, 1818, 2092
BstDSI	CCRYGG	3 cut(s)	258, 1064, 1239
BstEII	GGTNACC	1 cut(s)	1085
BstENI	CCTNNNNNAGG	1 cut(s)	932
BstFNI	CGCG	1 cut(s)	217
BstHHI	GCGC	1 cut(s)	402
BstKTI	GATC	9 cut(s)	93, 193, 414, 1168, 1307, 1345, 1417, 1627, 2088
BstMAI	GTCTC	2 cut(s)	89, 572
BstMBI	GATC	9 cut(s)	90, 190, 411, 1165, 1304, 1342, 1414, 1624, 2085
BstMCI	CGRYCG	3 cut(s)	50, 100, 285
BstMWI	GCNNNNNNNGC	4 cut(s)	263, 1103, 1199, 1526
BstNI	CCWGG	6 cut(s)	154, 462, 549, 1746, 1931, 1978
BstNSI	RCATGY	1 cut(s)	912
BstPI	GGTNACC	1 cut(s)	1085
BstSCI	CCNGG	7 cut(s)	152, 284, 460, 547, 1744, 1929, 1976
BstUI	CGCG	1 cut(s)	217
BstV1I	GCAGC	2 cut(s)	12, 313
BstV2I	GAAGAC	3 cut(s)	365, 1441, 1800
BstX2I	RGATCY	3 cut(s)	1165, 1304, 2085
BstYI	RGATCY	3 cut(s)	1165, 1304, 2085
BstZ17I	GTATAC	1 cut(s)	925
BstZI	CGGCCG	2 cut(s)	47, 97
BsuI	GTATCC	1 cut(s)	240
BsuRI	GGCC	7 cut(s)	49, 99, 381, 465, 1520, 1823, 2019
BtgI	CCRYGG	3 cut(s)	258, 1064, 1239
BtgZI	GCGATG	1 cut(s)	801
BtsI	GCAGTG	3 cut(s)	659, 1015, 1345
BtsIMutI	CAGTG	7 cut(s)	473, 659, 1015, 1122, 1345, 1512, 2040
BveI	ACCTGC	1 cut(s)	1243
Cac8I	GCNNGC	4 cut(s)	215, 268, 398, 1825
CfoI	GCGC	1 cut(s)	402
Cfr10I	RCCGGY	1 cut(s)	312
Cfr13I	GGNCC	5 cut(s)	112, 292, 743, 1374, 1986
CseI	GACGC	1 cut(s)	1103
CsiI	ACCWGGT	1 cut(s)	1976
Csp6I	GTAC	3 cut(s)	453, 892, 1539
CviQI	GTAC	3 cut(s)	453, 892, 1539
DdeI	CTNAG	7 cut(s)	165, 435, 586, 1515, 1684, 1818, 2092
DpnI	GATC	9 cut(s)	92, 192, 413, 1167, 1306, 1344, 1416, 1626, 2087
DpnII	GATC	9 cut(s)	90, 190, 411, 1165, 1304, 1342, 1414, 1624, 2085
EaeI	YGGCCR	4 cut(s)	47, 97, 463, 2017
EagI	CGGCCG	2 cut(s)	47, 97
Ecl136II	GAGCTC	2 cut(s)	64, 1130
EclXI	CGGCCG	2 cut(s)	47, 97
Eco130I	CCWWGG	2 cut(s)	390, 1239
Eco24I	GRGCYC	4 cut(s)	66, 153, 789, 1132
Eco32I	GATATC	2 cut(s)	130, 2133
Eco47I	GGWCC	5 cut(s)	112, 292, 743, 1374, 1986
Eco52I	CGGCCG	2 cut(s)	47, 97
Eco53kI	GAGCTC	2 cut(s)	64, 1130
Eco57I	CTGAAG	4 cut(s)	537, 545, 1224, 1932
Eco88I	CYCGRG	1 cut(s)	977
Eco91I	GGTNACC	1 cut(s)	1085
EcoICRI	GAGCTC	2 cut(s)	64, 1130
EcoNI	CCTNNNNNAGG	1 cut(s)	932
EcoO109I	RGGNCCY	1 cut(s)	1374
EcoO65I	GGTNACC	1 cut(s)	1085
EcoRII	CCWGG	6 cut(s)	152, 460, 547, 1744, 1929, 1976
EcoRV	GATATC	2 cut(s)	130, 2133
EcoT14I	CCWWGG	2 cut(s)	390, 1239
EcoT22I	ATGCAT	1 cut(s)	420
EcoT38I	GRGCYC	4 cut(s)	66, 153, 789, 1132
ErhI	CCWWGG	2 cut(s)	390, 1239
Esp3I	CGTCTC	1 cut(s)	89
FaqI	GGGAC	1 cut(s)	1360
FauI	CCCGC	2 cut(s)	222, 1385
FbaI	TGATCA	2 cut(s)	190, 1342
FblI	GTMKAC	2 cut(s)	540, 924
Fnu4HI	GCNGC	6 cut(s)	26, 29, 327, 1104, 1965, 2017
FriOI	GRGCYC	4 cut(s)	66, 153, 789, 1132
Fsp4HI	GCNGC	6 cut(s)	26, 29, 327, 1104, 1965, 2017
FspBI	CTAG	1 cut(s)	1809
GlaI	GCGC	1 cut(s)	401
GluI	GCNGC	6 cut(s)	26, 29, 327, 1104, 1965, 2017
GsaI	CCCAGC	1 cut(s)	1111
GsuI	CTGGAG	5 cut(s)	597, 786, 1146, 1194, 1653
HaeIII	GGCC	7 cut(s)	49, 99, 381, 465, 1520, 1823, 2019
HapII	CCGG	5 cut(s)	40, 46, 285, 313, 1989
HgaI	GACGC	1 cut(s)	1103
HhaI	GCGC	1 cut(s)	402
Hin1I	GRCGYC	2 cut(s)	135, 1095
Hin6I	GCGC	1 cut(s)	400
HinP1I	GCGC	1 cut(s)	400
HincII	GTYRAC	3 cut(s)	541, 1612, 1936
HindII	GTYRAC	3 cut(s)	541, 1612, 1936
HinfI	GANTC	8 cut(s)	20, 36, 602, 635, 985, 1028, 1277, 1719
HpaI	GTTAAC	1 cut(s)	1612
HpaII	CCGG	5 cut(s)	40, 46, 285, 313, 1989
HphI	GGTGA	5 cut(s)	597, 804, 1734, 1744, 2045
Hpy166II	GTNNAC	7 cut(s)	541, 914, 925, 1355, 1612, 1742, 1936
Hpy8I	GTNNAC	7 cut(s)	541, 914, 925, 1355, 1612, 1742, 1936
Hpy99I	CGWCG	2 cut(s)	55, 137
HpyAV	CCTTC	7 cut(s)	271, 283, 433, 505, 635, 1391, 1490
HpyCH4III	ACNGT	5 cut(s)	665, 691, 713, 2065, 2080
HpyCH4IV	ACGT	3 cut(s)	82, 135, 362
HpyCH4V	TGCA	7 cut(s)	266, 418, 801, 836, 1042, 1079, 1568
HpyF10VI	GCNNNNNNNGC	4 cut(s)	263, 1103, 1199, 1526
HpyF3I	CTNAG	7 cut(s)	165, 435, 586, 1515, 1684, 1818, 2092
HpySE526I	ACGT	3 cut(s)	82, 135, 362
Hsp92I	GRCGYC	2 cut(s)	135, 1095
HspAI	GCGC	1 cut(s)	400
KpnI	GGTACC	1 cut(s)	456
Ksp22I	TGATCA	2 cut(s)	190, 1342
KspAI	GTTAAC	1 cut(s)	1612
Kzo9I	GATC	9 cut(s)	90, 190, 411, 1165, 1304, 1342, 1414, 1624, 2085
LmnI	GCTCC	8 cut(s)	61, 148, 391, 442, 463, 977, 1127, 1213
Lsp1109I	GCAGC	2 cut(s)	12, 313
LweI	GCATC	4 cut(s)	253, 823, 1223, 1882
MabI	ACCWGGT	1 cut(s)	1976
MaeI	CTAG	1 cut(s)	1809
MaeII	ACGT	3 cut(s)	82, 135, 362
MalI	GATC	9 cut(s)	92, 192, 413, 1167, 1306, 1344, 1416, 1626, 2087
MbiI	CCGCTC	2 cut(s)	31, 458
MboI	GATC	9 cut(s)	90, 190, 411, 1165, 1304, 1342, 1414, 1624, 2085
MflI	RGATCY	3 cut(s)	1165, 1304, 2085
MhlI	GDGCHC	5 cut(s)	66, 153, 388, 789, 1132
MlsI	TGGCCA	1 cut(s)	465
MluCI	AATT	5 cut(s)	961, 1399, 1644, 1905, 2002
MluNI	TGGCCA	1 cut(s)	465
MlyI	GAGTC	2 cut(s)	29, 994
MmeI	TCCRAC	3 cut(s)	165, 273, 1869
Mox20I	TGGCCA	1 cut(s)	465
Mph1103I	ATGCAT	1 cut(s)	420
MscI	TGGCCA	1 cut(s)	465
MseI	TTAA	2 cut(s)	303, 1611
MslI	CAYNNNNRTG	2 cut(s)	882, 1338
Msp20I	TGGCCA	1 cut(s)	465
MspA1I	CMGCKG	2 cut(s)	408, 2016
MspI	CCGG	5 cut(s)	40, 46, 285, 313, 1989
MspR9I	CCNGG	7 cut(s)	154, 286, 462, 549, 1746, 1931, 1978
MvaI	CCWGG	6 cut(s)	154, 462, 549, 1746, 1931, 1978
MvnI	CGCG	1 cut(s)	217
MwoI	GCNNNNNNNGC	4 cut(s)	263, 1103, 1199, 1526
NciI	CCSGG	1 cut(s)	286
NcoI	CCATGG	1 cut(s)	1239
NdeII	GATC	9 cut(s)	90, 190, 411, 1165, 1304, 1342, 1414, 1624, 2085
NlaIV	GGNNCC	5 cut(s)	44, 150, 454, 1376, 2087
NmuCI	GTSAC	4 cut(s)	218, 306, 691, 2051
NsiI	ATGCAT	1 cut(s)	420
NspI	RCATGY	1 cut(s)	912
NspV	TTCGAA	1 cut(s)	1403
PaeR7I	CTCGAG	1 cut(s)	977
PasI	CCCWGGG	1 cut(s)	153
PciI	ACATGT	1 cut(s)	908
PfeI	GAWTC	6 cut(s)	36, 602, 635, 1028, 1277, 1719
PflFI	GACNNNGTC	1 cut(s)	1978
PkrI	GCNGC	6 cut(s)	27, 30, 328, 1105, 1966, 2018
PleI	GAGTC	2 cut(s)	28, 993
PpsI	GAGTC	2 cut(s)	28, 993
PpuMI	RGGWCCY	1 cut(s)	1374
PscI	ACATGT	1 cut(s)	908
Psp124BI	GAGCTC	2 cut(s)	66, 1132
Psp5II	RGGWCCY	1 cut(s)	1374
Psp6I	CCWGG	6 cut(s)	152, 460, 547, 1744, 1929, 1976
PspEI	GGTNACC	1 cut(s)	1085
PspFI	CCCAGC	1 cut(s)	1107
PspGI	CCWGG	6 cut(s)	152, 460, 547, 1744, 1929, 1976
PspN4I	GGNNCC	5 cut(s)	44, 150, 454, 1376, 2087
PspPI	GGNCC	5 cut(s)	112, 292, 743, 1374, 1986
PspPPI	RGGWCCY	1 cut(s)	1374
PspXI	VCTCGAGB	1 cut(s)	977
PsuI	RGATCY	3 cut(s)	1165, 1304, 2085
PsyI	GACNNNGTC	1 cut(s)	1978
PvuII	CAGCTG	1 cut(s)	408
RsaI	GTAC	3 cut(s)	454, 893, 1540
RsaNI	GTAC	3 cut(s)	453, 892, 1539
RseI	CAYNNNNRTG	2 cut(s)	882, 1338
SacI	GAGCTC	2 cut(s)	66, 1132
SalI	GTCGAC	1 cut(s)	539
SaqAI	TTAA	2 cut(s)	303, 1611
SatI	GCNGC	6 cut(s)	26, 29, 327, 1104, 1965, 2017
Sau3AI	GATC	9 cut(s)	90, 190, 411, 1165, 1304, 1342, 1414, 1624, 2085
Sau96I	GGNCC	5 cut(s)	112, 292, 743, 1374, 1986
ScaI	AGTACT	1 cut(s)	1540
SchI	GAGTC	2 cut(s)	29, 994
ScrFI	CCNGG	7 cut(s)	154, 286, 462, 549, 1746, 1931, 1978
SduI	GDGCHC	5 cut(s)	66, 153, 388, 789, 1132
SexAI	ACCWGGT	1 cut(s)	1976
SfaNI	GCATC	4 cut(s)	253, 823, 1223, 1882
Sfr274I	CTCGAG	1 cut(s)	977
SfuI	TTCGAA	1 cut(s)	1403
SinI	GGWCC	5 cut(s)	112, 292, 743, 1374, 1986
SlaI	CTCGAG	1 cut(s)	977
SmiMI	CAYNNNNRTG	2 cut(s)	882, 1338
SmlI	CTYRAG	4 cut(s)	86, 863, 977, 1386
SmoI	CTYRAG	4 cut(s)	86, 863, 977, 1386
Sse9I	AATT	5 cut(s)	961, 1399, 1644, 1905, 2002
SspI	AATATT	2 cut(s)	1249, 1294
SspMI	CTAG	1 cut(s)	1809
SstI	GAGCTC	2 cut(s)	66, 1132
StyD4I	CCNGG	7 cut(s)	152, 284, 460, 547, 1744, 1929, 1976
StyI	CCWWGG	2 cut(s)	390, 1239
TaaI	ACNGT	5 cut(s)	665, 691, 713, 2065, 2080
TaiI	ACGT	3 cut(s)	85, 138, 365
TaqI	TCGA	9 cut(s)	14, 132, 173, 540, 831, 942, 978, 1326, 1403
TasI	AATT	5 cut(s)	961, 1399, 1644, 1905, 2002
TatI	WGTACW	2 cut(s)	891, 1538
TauI	GCSGC	4 cut(s)	31, 1106, 1967, 2019
TfiI	GAWTC	6 cut(s)	36, 602, 635, 1028, 1277, 1719
Tru1I	TTAA	2 cut(s)	303, 1611
Tru9I	TTAA	2 cut(s)	303, 1611
TscAI	CASTG	7 cut(s)	473, 659, 1015, 1129, 1345, 1519, 2040
TseFI	GTSAC	4 cut(s)	218, 306, 691, 2051
TseI	GCWGC	2 cut(s)	25, 326
Tsp45I	GTSAC	4 cut(s)	218, 306, 691, 2051
TspGWI	ACGGA	3 cut(s)	68, 275, 1189
TspRI	CASTG	7 cut(s)	473, 659, 1015, 1129, 1345, 1519, 2040
Tth111I	GACNNNGTC	1 cut(s)	1978
VpaK11BI	GGWCC	5 cut(s)	112, 292, 743, 1374, 1986
XagI	CCTNNNNNAGG	1 cut(s)	932
XapI	RAATTY	1 cut(s)	1399
XceI	RCATGY	1 cut(s)	912
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1062
XhoI	CTCGAG	1 cut(s)	977
XmiI	GTMKAC	2 cut(s)	540, 924
XspI	CTAG	1 cut(s)	1809
ZraI	GACGTC	1 cut(s)	136
ZrmI	AGTACT	1 cut(s)	1540
Zsp2I	ATGCAT	1 cut(s)	420

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.