Basic Information

Type: Sequence Only

Biological Identity

Species

rosa_samantha

Chromosome

Unknown

Orthogroup ID

OG0008594

Physical Location & Seq

Genomic Coordinates Reverse (-)

0 .. 0

Gene Structure 1 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7BG091700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2013 bp

ATGGCGGTGTTGTCGATGGAGTCGCTGCCGCTGGGATTCCGATTCCGGCCAACGGACGAGGAGCTGATCAACCACTACCTGCGCCTCAAGATCAACGGCCGTCATTCCGAGGTCCAAGTCATCCCCGAAATCGACGTCTGCAAATGGGAGCCCTGGGATTTGCCAAAGCTATCGATGATAAAGTCGGATGATCAGGAATGGTTCTTCTTCTGCCCGCGTGACAGGAAGTATCCGAATGGTCATCGTTCCAACAGAGCCACAGATGCTGGCTACTGGAAGGCGACCGGGAAGGACCGCACCATCAAGTCCCGACAGTTCAAGTCTGCTACTAATAACACGGGCTTGGTTGGGATGAAGAAGACGTTGGTTTTCTACAAAGGCCGCGCTCCCAAGGGCGAGCGTACCAGCTGGATCATGCATGAGTATCGCCCCACCCAGAAGGAGCTGGATGGTACTGCTCCGGGACAGTGTGCCTTTGTTCTGTGTCGCCTGTTCCATAAACCAGAGGAGAAGGCTGAAGTTCTAAAGTATGATGAAGTAGACCAACCTGGCTTATCTCCTACCACCTCTCCTGATGAGACATCTTCAGATATAGTTCAGGAATCAGCTACCCCAGATATGAAAGGTGGAAAGGAATCAGAAGGTATATCGAGGTGGAATGACAGTTTTGACCACATGACCCCTGATACTCTGACTGTGCCACCTAATGACAGTTATATGGCGGCTTCTGATGTGGAAGTCTATGGACCAGAAGACACAATCTTTCCGGATGGCACATGTGAACAGGATGTATACCTCCCAGAGGTGTTCGATGAGTTTGGCAATAAACAGTATGAGAGCTCCTGTGAGGAGTCAACCAGTCAGAAGAACTTGGTTGGGGTCAGTGAGGCCTATCTATCTGATCATTCATTCATGTTGCAAGCCATACCACCAGAAAACTCATCGCTGAATGCTGCATGGGGTTACGCAGACACCAAAATGACCGAGCATAATCTGGACATGAGAGCTCGTGGCTTGTCCAATGAGCAATTTGATACTTCCTACCAAGCTGAAGCTCCAGCATCGATTTATGACCATAAACCTAGAATGGAAAATATCGGTTATCCCGGTAACTCATATGCTGATTCTGCTGTGTCGAATAATTTGGATGAATCTACCAATTGGAAGAATGGTGATAACCATAGCAGTGATCAAGTTGGTAGACCTAGAATCATGATCAGGTCCCGCCTTCCTCAAGAACGACCAAATTCGAACCCTGTGATTCAGGGAGAGGCCTACAGAAGAATTCGTTTAGCAGTTGATAACCATACAAGGGTTTCAAACCATAGCAAAGAAGAAGATGAAGGGCATTCAATTATCACCGAGGCCAGAGAAACTGTACAGGAGAGTCTTACCTCTGATGAACGGGAGGAAGTTCATGCAATAATCGATGAGGAAGAAGTAACCAGTAGGGATTATTCTGCTAACAATGATTCCGATCTTGTTGGTAAAACTGGAATCAGTTGTAATACCAGGCAACCTCCAGAGGCATCAAACTCAGACACACCCGTTACTCAGGGCACGGCTTCTAGAAGAATCCGCTTGGCGATGACTAGTTCACCTGGGTCAGTTGCCGATAGTAATGTGAGAGATACAAAGCATGGGCAAGAAGATGAAGTGGAATCTAGTATTATTGAGGCCTGCGAAGCCATAGAGAAAACTCCTAATCTGAACAAGCAGGAGGTAGAGTGTCATCCTCTGAAGTTGGATGCGAGCAGGAAAATTGCGGAAGAACCCTCAACAACACTGATTGATGAGAACAAGAAAACCACTGAAGAAGTCGCAACAAAGATCAGGTCAAGGACGGGAGGGAATGATAATTCGTTACATAGCAGCCGTATTGGGATGTCAGTGCGTTCCAAGGCAGCAGCATCTAAATATCATGGCCTGATTATCTTGTTCATTATTTCAGTTGGGATTCCCTTGGTTCTAACCATGTTCATAGCCTTTAGTGGGATCTGGATATCCCATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001067 GO:0002831 GO:0002833 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005783 GO:0005789 GO:0005886 GO:0006355 GO:0006950 GO:0006970 GO:0008150 GO:0009314 GO:0009416 GO:0009628 GO:0009642 GO:0009644 GO:0009889 GO:0009890 GO:0009891 GO:0009892 GO:0009893 GO:0009962 GO:0009987 GO:0010468 GO:0010556 GO:0010557 GO:0010558 GO:0010604 GO:0010605 GO:0010628 GO:0010629 GO:0012505 GO:0016020 GO:0019219 GO:0019222 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031328 GO:0031347 GO:0031349 GO:0031984 GO:0032101 GO:0032103 GO:0033554 GO:0042175 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043900 GO:0043902 GO:0044212 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0045892 GO:0045893 GO:0045934 GO:0045935 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048583 GO:0048584 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051173 GO:0051252 GO:0051253 GO:0051254 GO:0051716 GO:0060255 GO:0065007 GO:0071214 GO:0071470 GO:0071944 GO:0080090 GO:0080134 GO:0097159 GO:0098827 GO:0104004 GO:0140110 GO:1900424 GO:1900426 GO:1901363 GO:1902679 GO:1902680 GO:1903506 GO:1903507 GO:1903508 GO:2000112 GO:2000113 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

NAM

Protein Analysis

670

Amino Acids

75.09

Weight (kDa)

5.12

Isoelectric Point (pI)

46.92

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NAM	PF02365	10 - 143	1.6e-47	No apical meristem (NAM) protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008594)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G33060 AT1G33060 AT4G35580 AT4G35580 AT4G35580
fragaria_vesca	FvH4_5g10350 FvH4_5g10350
malus_domestica	MD00G1096600.v1.1 MD06G1124800.v1.1
prunus_persica	Prupe.5G135400_v2.0.a1 Prupe.5G135400_v2.0.a1
pyrus_communis	pycom06g11540 pycom14g11690
rosa_chinensis	RchiOBHm_Chr7g0187871
rosa_laevigata	RLG00000004751
rosa_multiflora	Rmu_ssc0000122.1_g000021
rosa_roxburghii	Rroxscaffold_3G00266990
rosa_rugosa	Rorug06G0484900
rosa_samantha	Rh7AG090100 Rh7BG091700 Rh7CG090800 Rh7DG092500
rosa_wichuraiana	Rw7G007780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	138
Acc36I	ACCTGC	1 cut(s)	87
AccI	GTMKAC	3 cut(s)	540, 792, 1201
AccII	CGCG	2 cut(s)	217, 384
AccIII	TCCGGA	1 cut(s)	766
AciI	CCGC	9 cut(s)	5, 29, 215, 295, 382, 722, 1225, 1579, 1766
AclWI	GGATC	2 cut(s)	419, 2003
AcoI	YGGCCR	2 cut(s)	47, 97
AcsI	RAATTY	2 cut(s)	1246, 1284
AcuI	CTGAAG	5 cut(s)	537, 570, 1071, 1760, 1833
AcyI	GRCGYC	1 cut(s)	135
AfaI	GTAC	3 cut(s)	403, 454, 1380
AfiI	CCNNNNNNNGG	4 cut(s)	52, 802, 1312, 1992
AflIII	ACRYGT	1 cut(s)	776
AgsI	TTSAA	3 cut(s)	319, 1320, 1353
AhlI	ACTAGT	1 cut(s)	1592
AjnI	CCWGG	4 cut(s)	152, 547, 1511, 1600
AjuI	GAANNNNNNNTTGG	2 cut(s)	347, 379
AluBI	AGCT	9 cut(s)	64, 169, 408, 445, 608, 840, 1007, 1049, 1055
AluI	AGCT	9 cut(s)	64, 169, 408, 445, 608, 840, 1007, 1049, 1055
Alw21I	GWGCWC	2 cut(s)	842, 1009
Alw26I	GTCTC	1 cut(s)	572
AlwI	GGATC	2 cut(s)	419, 2003
AlwNI	CAGNNNCTG	1 cut(s)	266
Aor13HI	TCCGGA	1 cut(s)	766
AoxI	GGCC	8 cut(s)	47, 97, 379, 888, 1272, 1365, 1677, 1924
ApeKI	GCWGC	5 cut(s)	25, 953, 1872, 1904, 1907
ApoI	RAATTY	2 cut(s)	1246, 1284
ArsI	GACNNNNNNTTYG	4 cut(s)	120, 152, 1820, 1852
AspLEI	GCGC	2 cut(s)	84, 386
AspS9I	GGNCC	4 cut(s)	112, 292, 746, 1221
AsuC2I	CCSGG	3 cut(s)	286, 462, 1107
AsuHPI	GGTGA	3 cut(s)	1184, 1351, 1590
AsuII	TTCGAA	1 cut(s)	1250
AvaII	GGWCC	4 cut(s)	112, 292, 746, 1221
BaeGI	GKGCMC	1 cut(s)	1562
BanII	GRGCYC	3 cut(s)	153, 842, 1009
BauI	CACGAG	1 cut(s)	1008
BbsI	GAAGAC	2 cut(s)	365, 759
Bbv12I	GWGCWC	2 cut(s)	842, 1009
BbvI	GCAGC	5 cut(s)	12, 940, 1884, 1916, 1919
BccI	CCATC	4 cut(s)	10, 308, 443, 764
BceAI	ACGGC	4 cut(s)	84, 112, 1578, 1860
BcgI	CGANNNNNNTGC	2 cut(s)	407, 441
BciT130I	CCWGG	4 cut(s)	154, 549, 1513, 1602
BciVI	GTATCC	1 cut(s)	240
BclI	TGATCA	5 cut(s)	66, 190, 901, 1189, 1215
BcnI	CCSGG	3 cut(s)	286, 462, 1107
BcoDI	GTCTC	1 cut(s)	572
BcuI	ACTAGT	1 cut(s)	1592
BfaI	CTAG	5 cut(s)	1083, 1206, 1569, 1593, 1665
BfmI	CTRYAG	1 cut(s)	1276
BfuAI	ACCTGC	1 cut(s)	87
BfuI	GTATCC	1 cut(s)	240
BisI	GCNGC	8 cut(s)	26, 29, 382, 723, 954, 1873, 1905, 1908
BlsI	GCNGC	8 cut(s)	27, 30, 383, 724, 955, 1874, 1906, 1909
Bme1390I	CCNGG	7 cut(s)	154, 286, 462, 549, 1107, 1513, 1602
Bme18I	GGWCC	4 cut(s)	112, 292, 746, 1221
BmgT120I	GGNCC	4 cut(s)	112, 292, 746, 1221
BmiI	GGNNCC	2 cut(s)	150, 1223
BmrFI	CCNGG	7 cut(s)	154, 286, 462, 549, 1107, 1513, 1602
BmsI	GCATC	5 cut(s)	253, 1070, 1538, 1738, 1919
BpiI	GAAGAC	2 cut(s)	365, 759
BpmI	CTGGAG	2 cut(s)	1041, 1506
Bpu14I	TTCGAA	1 cut(s)	1250
BpuEI	CTTGAG	2 cut(s)	71, 1218
BpuMI	CCSGG	3 cut(s)	286, 462, 1107
Bsa29I	ATCGAT	3 cut(s)	173, 1064, 1428
BsaBI	GATNNNNATC	1 cut(s)	1476
BsaHI	GRCGYC	1 cut(s)	135
BsaJI	CCNNGG	8 cut(s)	108, 152, 153, 390, 1362, 1601, 1899, 1962
BsaWI	WCCGGW	1 cut(s)	766
BsaXI	ACNNNNNCTCC	4 cut(s)	553, 583, 1712, 1742
Bsc4I	CCNNNNNNNGG	4 cut(s)	52, 802, 1312, 1992
Bse1I	ACTGG	4 cut(s)	278, 858, 1446, 1498
Bse8I	GATNNNNATC	1 cut(s)	1476
BseAI	TCCGGA	1 cut(s)	766
BseBI	CCWGG	4 cut(s)	154, 549, 1513, 1602
BseCI	ATCGAT	3 cut(s)	173, 1064, 1428
BseDI	CCNNGG	8 cut(s)	108, 152, 153, 390, 1362, 1601, 1899, 1962
BseJI	GATNNNNATC	1 cut(s)	1476
BseLI	CCNNNNNNNGG	4 cut(s)	52, 802, 1312, 1992
BseMII	CTCAG	2 cut(s)	1551, 1568
BseNI	ACTGG	4 cut(s)	278, 858, 1446, 1498
BseRI	GAGGAG	3 cut(s)	74, 521, 863
BseSI	GKGCMC	1 cut(s)	1562
BseX3I	CGGCCG	1 cut(s)	97
BseXI	GCAGC	5 cut(s)	12, 940, 1884, 1916, 1919
BseYI	CCCAGC	1 cut(s)	31
Bsh1236I	CGCG	2 cut(s)	217, 384
Bsh1285I	CGRYCG	2 cut(s)	100, 285
BshFI	GGCC	8 cut(s)	49, 99, 381, 890, 1274, 1367, 1679, 1926
BshVI	ATCGAT	3 cut(s)	173, 1064, 1428
BsiEI	CGRYCG	2 cut(s)	100, 285
BsiHKAI	GWGCWC	2 cut(s)	842, 1009
BsiSI	CCGG	5 cut(s)	46, 285, 461, 767, 1107
BslFI	GGGAC	3 cut(s)	292, 477, 1207
BslI	CCNNNNNNNGG	4 cut(s)	52, 802, 1312, 1992
BsmAI	GTCTC	1 cut(s)	572
BsmFI	GGGAC	3 cut(s)	292, 477, 1207
BsmI	GAATGC	2 cut(s)	955, 1348
BsnI	GGCC	8 cut(s)	49, 99, 381, 890, 1274, 1367, 1679, 1926
Bsp119I	TTCGAA	1 cut(s)	1250
Bsp1286I	GDGCHC	4 cut(s)	153, 842, 1009, 1562
Bsp13I	TCCGGA	1 cut(s)	766
Bsp1407I	TGTACA	1 cut(s)	1378
BspACI	CCGC	9 cut(s)	5, 29, 215, 295, 382, 722, 1225, 1579, 1766
BspANI	GGCC	8 cut(s)	49, 99, 381, 890, 1274, 1367, 1679, 1926
BspCNI	CTCAG	2 cut(s)	1550, 1567
BspDI	ATCGAT	3 cut(s)	173, 1064, 1428
BspEI	TCCGGA	1 cut(s)	766
BspFNI	CGCG	2 cut(s)	217, 384
BspHI	TCATGA	1 cut(s)	1212
BspLI	GGNNCC	2 cut(s)	150, 1223
BspMI	ACCTGC	1 cut(s)	87
BspPI	GGATC	2 cut(s)	419, 2003
BspT104I	TTCGAA	1 cut(s)	1250
BsrGI	TGTACA	1 cut(s)	1378
BsrI	ACTGG	4 cut(s)	278, 858, 1446, 1498
BssECI	CCNNGG	8 cut(s)	108, 152, 153, 390, 1362, 1601, 1899, 1962
BssNAI	GTATAC	1 cut(s)	793
BssNI	GRCGYC	1 cut(s)	135
BssSI	CACGAG	1 cut(s)	1008
BssT1I	CCWWGG	3 cut(s)	390, 1899, 1962
Bst1107I	GTATAC	1 cut(s)	793
Bst2BI	CACGAG	1 cut(s)	1008
Bst2UI	CCWGG	4 cut(s)	154, 549, 1513, 1602
Bst4CI	ACNGT	7 cut(s)	315, 468, 665, 697, 713, 831, 1378
BstACI	GRCGYC	1 cut(s)	135
BstAUI	TGTACA	1 cut(s)	1378
BstBI	TTCGAA	1 cut(s)	1250
BstC8I	GCNNGC	6 cut(s)	215, 268, 398, 921, 1681, 1753
BstDEI	CTNAG	2 cut(s)	1537, 1554
BstENI	CCTNNNNNAGG	1 cut(s)	800
BstFNI	CGCG	2 cut(s)	217, 384
BstHHI	GCGC	2 cut(s)	84, 386
BstMAI	GTCTC	1 cut(s)	572
BstMCI	CGRYCG	2 cut(s)	100, 285
BstMWI	GCNNNNNNNGC	3 cut(s)	263, 1127, 1685
BstNI	CCWGG	4 cut(s)	154, 549, 1513, 1602
BstNSI	RCATGY	1 cut(s)	780
BstSCI	CCNGG	7 cut(s)	152, 284, 460, 547, 1105, 1511, 1600
BstSFI	CTRYAG	1 cut(s)	1276
BstSLI	GKGCMC	1 cut(s)	1562
BstUI	CGCG	2 cut(s)	217, 384
BstV1I	GCAGC	5 cut(s)	12, 940, 1884, 1916, 1919
BstV2I	GAAGAC	2 cut(s)	365, 759
BstX2I	RGATCY	1 cut(s)	1995
BstYI	RGATCY	1 cut(s)	1995
BstZ17I	GTATAC	1 cut(s)	793
BstZI	CGGCCG	1 cut(s)	97
Bsu15I	ATCGAT	3 cut(s)	173, 1064, 1428
BsuI	GTATCC	1 cut(s)	240
BsuRI	GGCC	8 cut(s)	49, 99, 381, 890, 1274, 1367, 1679, 1926
BsuTUI	ATCGAT	3 cut(s)	173, 1064, 1428
BtgZI	GCGATG	2 cut(s)	927, 1601
BtsI	GCAGTG	1 cut(s)	1192
BtsIMutI	CAGTG	6 cut(s)	473, 889, 1192, 1784, 1809, 1896
BveI	ACCTGC	1 cut(s)	87
Cac8I	GCNNGC	6 cut(s)	215, 268, 398, 921, 1681, 1753
CaiI	CAGNNNCTG	1 cut(s)	266
CciI	TCATGA	1 cut(s)	1212
CfoI	GCGC	2 cut(s)	84, 386
Cfr13I	GGNCC	4 cut(s)	112, 292, 746, 1221
ClaI	ATCGAT	3 cut(s)	173, 1064, 1428
Csp6I	GTAC	3 cut(s)	402, 453, 1379
CviQI	GTAC	3 cut(s)	402, 453, 1379
DdeI	CTNAG	2 cut(s)	1537, 1554
EaeI	YGGCCR	2 cut(s)	47, 97
EagI	CGGCCG	1 cut(s)	97
Ecl136II	GAGCTC	2 cut(s)	840, 1007
EclXI	CGGCCG	1 cut(s)	97
Eco130I	CCWWGG	3 cut(s)	390, 1899, 1962
Eco147I	AGGCCT	3 cut(s)	890, 1274, 1679
Eco24I	GRGCYC	3 cut(s)	153, 842, 1009
Eco32I	GATATC	1 cut(s)	2004
Eco47I	GGWCC	4 cut(s)	112, 292, 746, 1221
Eco52I	CGGCCG	1 cut(s)	97
Eco53kI	GAGCTC	2 cut(s)	840, 1007
Eco57I	CTGAAG	5 cut(s)	537, 570, 1071, 1760, 1833
EcoICRI	GAGCTC	2 cut(s)	840, 1007
EcoNI	CCTNNNNNAGG	1 cut(s)	800
EcoO109I	RGGNCCY	1 cut(s)	1221
EcoRI	GAATTC	1 cut(s)	1284
EcoRII	CCWGG	4 cut(s)	152, 547, 1511, 1600
EcoRV	GATATC	1 cut(s)	2004
EcoT14I	CCWWGG	3 cut(s)	390, 1899, 1962
EcoT22I	ATGCAT	1 cut(s)	420
EcoT38I	GRGCYC	3 cut(s)	153, 842, 1009
ErhI	CCWWGG	3 cut(s)	390, 1899, 1962
FaqI	GGGAC	3 cut(s)	292, 477, 1207
FauI	CCCGC	2 cut(s)	222, 1232
FauNDI	CATATG	1 cut(s)	1117
FbaI	TGATCA	5 cut(s)	66, 190, 901, 1189, 1215
FblI	GTMKAC	3 cut(s)	540, 792, 1201
Fnu4HI	GCNGC	8 cut(s)	26, 29, 382, 723, 954, 1873, 1905, 1908
FriOI	GRGCYC	3 cut(s)	153, 842, 1009
Fsp4HI	GCNGC	8 cut(s)	26, 29, 382, 723, 954, 1873, 1905, 1908
FspBI	CTAG	5 cut(s)	1083, 1206, 1569, 1593, 1665
GlaI	GCGC	2 cut(s)	83, 385
GluI	GCNGC	8 cut(s)	26, 29, 382, 723, 954, 1873, 1905, 1908
GsaI	CCCAGC	1 cut(s)	35
GsuI	CTGGAG	2 cut(s)	1041, 1506
HaeIII	GGCC	8 cut(s)	49, 99, 381, 890, 1274, 1367, 1679, 1926
HapII	CCGG	5 cut(s)	46, 285, 461, 767, 1107
HhaI	GCGC	2 cut(s)	84, 386
Hin1I	GRCGYC	1 cut(s)	135
Hin6I	GCGC	2 cut(s)	82, 384
HinP1I	GCGC	2 cut(s)	82, 384
HincII	GTYRAC	1 cut(s)	855
HindII	GTYRAC	1 cut(s)	855
HpaII	CCGG	5 cut(s)	46, 285, 461, 767, 1107
HphI	GGTGA	3 cut(s)	1184, 1351, 1590
Hpy166II	GTNNAC	6 cut(s)	541, 782, 793, 855, 1202, 1598
Hpy8I	GTNNAC	6 cut(s)	541, 782, 793, 855, 1202, 1598
Hpy99I	CGWCG	1 cut(s)	137
HpyAV	CCTTC	7 cut(s)	271, 283, 433, 505, 635, 1238, 1337
HpyCH4III	ACNGT	7 cut(s)	315, 468, 665, 697, 713, 831, 1378
HpyCH4IV	ACGT	2 cut(s)	135, 362
HpyCH4V	TGCA	5 cut(s)	141, 418, 919, 956, 1421
HpyF10VI	GCNNNNNNNGC	3 cut(s)	263, 1127, 1685
HpyF3I	CTNAG	2 cut(s)	1537, 1554
HpySE526I	ACGT	2 cut(s)	135, 362
Hsp92I	GRCGYC	1 cut(s)	135
HspAI	GCGC	2 cut(s)	82, 384
Kpn2I	TCCGGA	1 cut(s)	766
Ksp22I	TGATCA	5 cut(s)	66, 190, 901, 1189, 1215
LmnI	GCTCC	7 cut(s)	61, 148, 391, 442, 463, 845, 1060
Lsp1109I	GCAGC	5 cut(s)	12, 940, 1884, 1916, 1919
LweI	GCATC	5 cut(s)	253, 1070, 1538, 1738, 1919
MaeI	CTAG	5 cut(s)	1083, 1206, 1569, 1593, 1665
MaeII	ACGT	2 cut(s)	135, 362
MaeIII	GTNAC	6 cut(s)	218, 962, 1109, 1441, 1549, 1863
MfeI	CAATTG	1 cut(s)	1159
MflI	RGATCY	1 cut(s)	1995
MhlI	GDGCHC	4 cut(s)	153, 842, 1009, 1562
MluCI	AATT	8 cut(s)	1028, 1141, 1159, 1246, 1284, 1353, 1761, 1858
MlyI	GAGTC	3 cut(s)	29, 860, 1396
MmeI	TCCRAC	3 cut(s)	165, 273, 1725
Mph1103I	ATGCAT	1 cut(s)	420
MroI	TCCGGA	1 cut(s)	766
MslI	CAYNNNNRTG	2 cut(s)	977, 1185
MspA1I	CMGCKG	2 cut(s)	31, 408
MspI	CCGG	5 cut(s)	46, 285, 461, 767, 1107
MspR9I	CCNGG	7 cut(s)	154, 286, 462, 549, 1107, 1513, 1602
MunI	CAATTG	1 cut(s)	1159
Mva1269I	GAATGC	2 cut(s)	955, 1348
MvaI	CCWGG	4 cut(s)	154, 549, 1513, 1602
MvnI	CGCG	2 cut(s)	217, 384
MwoI	GCNNNNNNNGC	3 cut(s)	263, 1127, 1685
NciI	CCSGG	3 cut(s)	286, 462, 1107
NdeI	CATATG	1 cut(s)	1117
NlaIV	GGNNCC	2 cut(s)	150, 1223
NmuCI	GTSAC	1 cut(s)	218
NsiI	ATGCAT	1 cut(s)	420
NspI	RCATGY	1 cut(s)	780
NspV	TTCGAA	1 cut(s)	1250
PagI	TCATGA	1 cut(s)	1212
PasI	CCCWGGG	1 cut(s)	153
PceI	AGGCCT	3 cut(s)	890, 1274, 1679
PciI	ACATGT	1 cut(s)	776
PctI	GAATGC	2 cut(s)	955, 1348
PfoI	TCCNGGA	1 cut(s)	460
PkrI	GCNGC	8 cut(s)	27, 30, 383, 724, 955, 1874, 1906, 1909
PleI	GAGTC	3 cut(s)	28, 859, 1395
PpsI	GAGTC	3 cut(s)	28, 859, 1395
PpuMI	RGGWCCY	1 cut(s)	1221
PscI	ACATGT	1 cut(s)	776
Psp124BI	GAGCTC	2 cut(s)	842, 1009
Psp5II	RGGWCCY	1 cut(s)	1221
Psp6I	CCWGG	4 cut(s)	152, 547, 1511, 1600
PspFI	CCCAGC	1 cut(s)	31
PspGI	CCWGG	4 cut(s)	152, 547, 1511, 1600
PspN4I	GGNNCC	2 cut(s)	150, 1223
PspPI	GGNCC	4 cut(s)	112, 292, 746, 1221
PspPPI	RGGWCCY	1 cut(s)	1221
PstNI	CAGNNNCTG	1 cut(s)	266
PsuI	RGATCY	1 cut(s)	1995
PvuII	CAGCTG	1 cut(s)	408
RsaI	GTAC	3 cut(s)	403, 454, 1380
RsaNI	GTAC	3 cut(s)	402, 453, 1379
RseI	CAYNNNNRTG	2 cut(s)	977, 1185
SacI	GAGCTC	2 cut(s)	842, 1009
SatI	GCNGC	8 cut(s)	26, 29, 382, 723, 954, 1873, 1905, 1908
Sau96I	GGNCC	4 cut(s)	112, 292, 746, 1221
SchI	GAGTC	3 cut(s)	29, 860, 1396
ScrFI	CCNGG	7 cut(s)	154, 286, 462, 549, 1107, 1513, 1602
SduI	GDGCHC	4 cut(s)	153, 842, 1009, 1562
SfaNI	GCATC	5 cut(s)	253, 1070, 1538, 1738, 1919
SfcI	CTRYAG	1 cut(s)	1276
SfuI	TTCGAA	1 cut(s)	1250
SinI	GGWCC	4 cut(s)	112, 292, 746, 1221
SmiMI	CAYNNNNRTG	2 cut(s)	977, 1185
SmlI	CTYRAG	2 cut(s)	86, 1233
SmoI	CTYRAG	2 cut(s)	86, 1233
SpeI	ACTAGT	1 cut(s)	1592
Sse9I	AATT	8 cut(s)	1028, 1141, 1159, 1246, 1284, 1353, 1761, 1858
SseBI	AGGCCT	3 cut(s)	890, 1274, 1679
SsiI	CCGC	9 cut(s)	5, 29, 215, 295, 382, 722, 1225, 1579, 1766
SspMI	CTAG	5 cut(s)	1083, 1206, 1569, 1593, 1665
SstI	GAGCTC	2 cut(s)	842, 1009
StuI	AGGCCT	3 cut(s)	890, 1274, 1679
StyD4I	CCNGG	7 cut(s)	152, 284, 460, 547, 1105, 1511, 1600
StyI	CCWWGG	3 cut(s)	390, 1899, 1962
TaaI	ACNGT	7 cut(s)	315, 468, 665, 697, 713, 831, 1378
TaiI	ACGT	2 cut(s)	138, 365
TaqI	TCGA	9 cut(s)	14, 132, 173, 650, 810, 1064, 1136, 1250, 1428
TaqII	GACCGA	1 cut(s)	998
TasI	AATT	8 cut(s)	1028, 1141, 1159, 1246, 1284, 1353, 1761, 1858
TatI	WGTACW	1 cut(s)	1378
TauI	GCSGC	3 cut(s)	31, 384, 725
TscAI	CASTG	6 cut(s)	473, 889, 1192, 1791, 1816, 1896
TseFI	GTSAC	1 cut(s)	218
TseI	GCWGC	5 cut(s)	25, 953, 1872, 1904, 1907
Tsp45I	GTSAC	1 cut(s)	218
TspGWI	ACGGA	1 cut(s)	68
TspRI	CASTG	6 cut(s)	473, 889, 1192, 1791, 1816, 1896
VpaK11BI	GGWCC	4 cut(s)	112, 292, 746, 1221
XagI	CCTNNNNNAGG	1 cut(s)	800
XapI	RAATTY	2 cut(s)	1246, 1284
XbaI	TCTAGA	1 cut(s)	1568
XceI	RCATGY	1 cut(s)	780
XmiI	GTMKAC	3 cut(s)	540, 792, 1201
XspI	CTAG	5 cut(s)	1083, 1206, 1569, 1593, 1665
ZraI	GACGTC	1 cut(s)	136
Zsp2I	ATGCAT	1 cut(s)	420

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.