Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0008594

Physical Location & Seq

Genomic Coordinates Reverse (-)

7591952 .. 7595710

Gene Structure 3759 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ16774

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2142 bp

ATGGCGGTGTTGTCGATGGAGTCGCTGCCGCTGGGATTCCGATTCCGGCCGACGGACGAGGAGCTGATCAACCACTACCTGCGCCTCAAGATCAACGGCCGTCATTCCGAGGTCCAAGTCATCCCCGAAATCGATGTCTGCAAAAGGGAGCCCTGGGATTTGCCAAAGCTATCGATGATAAAGTCGGATGATCAGGAATGGTTCTTCTTCTGCCCGCGTGACAGGAAGTATCCGAATGGTCATCGTTCCAATAGAGCCACAGATGCTGGCTACTGGAAGGCGACCGGGAAGGACCGCACCATCAAGTCCCGACAGTTCAAGTCTGCTACTAATAACACGGGCTTGGTTGGGATGAAGAAGACGTTGGTTTTCTACAGAGGCCGTGCTCCCAAGGGCGAGCGTACCAGCTGGATCATGCATGAGTATCGTCCCACCCAGAAGGAGCTGGATGGTACTGCTCCTGGACAGTGTGCCTTTGTTCTGTGTCGCCTGTTTCATAAACCAGAGGAGAAATCTGAAGTTCTAAAGTATGATGAAGTAGACCAACCTGGCTTATCTCCTACCACCTCTCCTGATGAGACATCTTCAGATATAGTTCAGGAATCAGCTACCCCAGATATGAAAGGTGGAAAGGAATCAGAAGGTATATCGAGCTGGAATGACAGTTTTGACCACATGACCCCTGATACTCTGACTGTGCCACCTAATGACAGTTATATGGCTTCTGATGTGGAAGTCTATGGACCAGAAGACACAATCTTTCCGGGACATTATCATCTGCCGGGAGAAGTGGGGTTCTATGATCCCAATGAACCCACGATTGACTGCAAAATCTTTTCACCATTCAATGCAGAGCTAGATTACGTGGGTTCACCTCTTGAGTTTGGCAATTATAACAATGGATCGCATTTTCTGGATGGCACATGTGAACAGGATGTATACCTCCCAGAGGTGTTCGATGAGTTTGGCAATAAACAGTATGAGAGCTCCTGCGAGGACTCAACCAGTCAGAAGAACTTGGTTGGGGTCAGTGAGGCCTATCTATCTGATCATTCATTCATGTTGCAAGCCATACCACCAGAAAACTTATCGCTGAATGCTTCATGGGGTTACGCAGACACCAAAATGACCGAGCGTTATCTGGACATGAGAGCTCGTGGCTTGTCCAATGAGCAATTTGATACTTCCTACCAAGCTGAAGCTCCAGCATCGATTTATGACCATAAACCTAGAATGGAAAATATCGGTTATCCCGGTAACTCATATGCTGATTCTGCTGTGTCGAATAATTTGGATGAATCTACCAATTGGAAGAATGGTGATAACCATAGCAGTGACCAAGTTGATAGACCTAGAATCATGATCAGGTCCCGCCTGCCTCAAGAACGACCAAATTCGAACTTTTTGAATCAGGGAGAGGCCTGCAGAAGAATTCGTTTAGCAGTTCTTTCAAACCATAGCAAAGAAGAAGATGAAGGGCATTCAATTATCACCGAGGCCAGAGAAACTGTACAGGAGAGTCTTACCTCTGATGAACGGGAGGAAGTTCATGCAATAAACGATGAGGAAGAAGTGACCAGTAGGGATTATTCTGCTAACAATGATTCCCATCTTGTTGGTAAAACTGGAATCAGTTGTAATACCAGGCAACCTCCAGAGGCATCAAACTCAGACAAACCCGTTACTCAGGGCACGGCTCCTAGAAGAAACGACTTGGCGATGACTAGTTCACCTGGGTCAGTTGCTGATAGTAATGTGAGAGATACAAAGCATGGGCAAGAAGATGAAGTGGAATCTAGTATTATTGAGGCCTGCGAAGCCATAGAGAAAACTCCTAATCTGAACAAGCAGGAGGTGGAGTGTCATCCTCTGAAGTTGGATGCGAGCAGGAAAATTGCAGAAGAACCCTCAACAACACTGATTGATGAGAAGAAGAAAACCACTGAAGAAGTCGCAACAAAGATCAGGTCAAGGACGGGAGGGAATGATAATTCATTACATAGCAGCCATATTGGGACGTCAGTGCGTTCCAAGGCAGCAGCATCTAAATATCATGGCCTGATTATCTTCATTATTTCAGTTGGGATTCCCTTGGTTCTAACCATGTTCATAGCCTTCAGTGGGATCTGGATATCCCATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001067 GO:0002831 GO:0002833 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005783 GO:0005789 GO:0005886 GO:0006355 GO:0006950 GO:0006970 GO:0008150 GO:0009314 GO:0009416 GO:0009628 GO:0009642 GO:0009644 GO:0009889 GO:0009890 GO:0009891 GO:0009892 GO:0009893 GO:0009962 GO:0009987 GO:0010468 GO:0010556 GO:0010557 GO:0010558 GO:0010604 GO:0010605 GO:0010628 GO:0010629 GO:0012505 GO:0016020 GO:0019219 GO:0019222 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031328 GO:0031347 GO:0031349 GO:0031984 GO:0032101 GO:0032103 GO:0033554 GO:0042175 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043900 GO:0043902 GO:0044212 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0045892 GO:0045893 GO:0045934 GO:0045935 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048583 GO:0048584 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051173 GO:0051252 GO:0051253 GO:0051254 GO:0051716 GO:0060255 GO:0065007 GO:0071214 GO:0071470 GO:0071944 GO:0080090 GO:0080134 GO:0097159 GO:0098827 GO:0104004 GO:0140110 GO:1900424 GO:1900426 GO:1901363 GO:1902679 GO:1902680 GO:1903506 GO:1903507 GO:1903508 GO:2000112 GO:2000113 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

NAM

Protein Analysis

713

Amino Acids

79.99

Weight (kDa)

5.05

Isoelectric Point (pI)

45.87

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NAM	PF02365	10 - 143	1.9e-47	No apical meristem (NAM) protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008594)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G33060 AT1G33060 AT4G35580 AT4G35580 AT4G35580
fragaria_vesca	FvH4_5g10350 FvH4_5g10350
malus_domestica	MD00G1096600.v1.1 MD06G1124800.v1.1
prunus_persica	Prupe.5G135400_v2.0.a1 Prupe.5G135400_v2.0.a1
pyrus_communis	pycom06g11540 pycom14g11690
rosa_chinensis	RchiOBHm_Chr7g0187871
rosa_laevigata	RLG00000004751
rosa_multiflora	Rmu_ssc0000122.1_g000021
rosa_roxburghii	Rroxscaffold_3G00266990
rosa_rugosa	Rorug06G0484900
rosa_samantha	Rh7AG090100 Rh7BG091700 Rh7CG090800 Rh7DG092500
rosa_wichuraiana	Rw7G007780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	894
AatII	GACGTC	1 cut(s)	2021
Acc36I	ACCTGC	1 cut(s)	87
AccI	GTMKAC	2 cut(s)	540, 939
AccII	CGCG	1 cut(s)	217
AciI	CCGC	5 cut(s)	5, 29, 215, 295, 1372
AclWI	GGATC	4 cut(s)	419, 797, 910, 2132
AcoI	YGGCCR	2 cut(s)	47, 97
AcsI	RAATTY	2 cut(s)	1393, 1431
AcuI	CTGAAG	6 cut(s)	537, 570, 1218, 1892, 1965, 2101
AcyI	GRCGYC	1 cut(s)	2018
AfaI	GTAC	3 cut(s)	403, 454, 1512
AfiI	CCNNNNNNNGG	3 cut(s)	52, 949, 2121
AflIII	ACRYGT	1 cut(s)	923
AgsI	TTSAA	5 cut(s)	319, 847, 1408, 1452, 1485
AhlI	ACTAGT	1 cut(s)	1724
AjnI	CCWGG	5 cut(s)	152, 460, 547, 1643, 1732
AjuI	GAANNNNNNNTTGG	2 cut(s)	347, 379
Alw21I	GWGCWC	3 cut(s)	388, 989, 1156
Alw26I	GTCTC	1 cut(s)	572
AlwI	GGATC	4 cut(s)	419, 797, 910, 2132
AlwNI	CAGNNNCTG	2 cut(s)	266, 1745
AoxI	GGCC	8 cut(s)	47, 97, 379, 1035, 1419, 1497, 1809, 2056
ApeKI	GCWGC	4 cut(s)	25, 2004, 2036, 2039
ApoI	RAATTY	2 cut(s)	1393, 1431
ArsI	GACNNNNNNTTYG	4 cut(s)	120, 152, 1952, 1984
AspLEI	GCGC	1 cut(s)	84
AspS9I	GGNCC	4 cut(s)	112, 292, 743, 1368
AsuC2I	CCSGG	4 cut(s)	286, 765, 783, 1254
AsuHPI	GGTGA	5 cut(s)	831, 864, 1331, 1483, 1722
AsuII	TTCGAA	1 cut(s)	1397
AvaII	GGWCC	4 cut(s)	112, 292, 743, 1368
BaeGI	GKGCMC	1 cut(s)	1694
BanII	GRGCYC	3 cut(s)	153, 989, 1156
BauI	CACGAG	1 cut(s)	1155
BbsI	GAAGAC	2 cut(s)	365, 756
Bbv12I	GWGCWC	3 cut(s)	388, 989, 1156
BbvI	GCAGC	4 cut(s)	12, 2016, 2048, 2051
BccI	CCATC	5 cut(s)	10, 308, 443, 911, 1617
BceAI	ACGGC	4 cut(s)	84, 112, 366, 1710
BcgI	CGANNNNNNTGC	2 cut(s)	407, 441
BciT130I	CCWGG	5 cut(s)	154, 462, 549, 1645, 1734
BciVI	GTATCC	1 cut(s)	240
BclI	TGATCA	4 cut(s)	66, 190, 1048, 1362
BcnI	CCSGG	4 cut(s)	286, 765, 783, 1254
BcoDI	GTCTC	1 cut(s)	572
BcuI	ACTAGT	1 cut(s)	1724
BfaI	CTAG	6 cut(s)	857, 1230, 1353, 1701, 1725, 1797
BfmI	CTRYAG	2 cut(s)	373, 1423
BfuAI	ACCTGC	1 cut(s)	87
BfuI	GTATCC	1 cut(s)	240
BisI	GCNGC	5 cut(s)	26, 29, 2005, 2037, 2040
BlsI	GCNGC	5 cut(s)	27, 30, 2006, 2038, 2041
Bme1390I	CCNGG	9 cut(s)	154, 286, 462, 549, 765, 783, 1254, 1645, 1734
Bme18I	GGWCC	4 cut(s)	112, 292, 743, 1368
BmgT120I	GGNCC	4 cut(s)	112, 292, 743, 1368
BmiI	GGNNCC	3 cut(s)	150, 1370, 1698
BmrFI	CCNGG	9 cut(s)	154, 286, 462, 549, 765, 783, 1254, 1645, 1734
BmsI	GCATC	5 cut(s)	253, 1217, 1670, 1870, 2051
BpiI	GAAGAC	2 cut(s)	365, 756
BpmI	CTGGAG	2 cut(s)	1188, 1638
Bpu14I	TTCGAA	1 cut(s)	1397
BpuEI	CTTGAG	3 cut(s)	71, 899, 1365
BpuMI	CCSGG	4 cut(s)	286, 765, 783, 1254
Bsa29I	ATCGAT	3 cut(s)	132, 173, 1211
BsaAI	YACGTR	1 cut(s)	865
BsaBI	GATNNNNATC	1 cut(s)	1608
BsaHI	GRCGYC	1 cut(s)	2018
BsaJI	CCNNGG	8 cut(s)	108, 152, 153, 390, 1494, 1733, 2031, 2091
BsaXI	ACNNNNNCTCC	4 cut(s)	553, 583, 1844, 1874
Bsc4I	CCNNNNNNNGG	3 cut(s)	52, 949, 2121
Bse1I	ACTGG	4 cut(s)	278, 1005, 1578, 1630
Bse8I	GATNNNNATC	1 cut(s)	1608
BseBI	CCWGG	5 cut(s)	154, 462, 549, 1645, 1734
BseCI	ATCGAT	3 cut(s)	132, 173, 1211
BseDI	CCNNGG	8 cut(s)	108, 152, 153, 390, 1494, 1733, 2031, 2091
BseGI	GGATG	9 cut(s)	120, 193, 357, 454, 922, 940, 1300, 1864, 1885
BseJI	GATNNNNATC	1 cut(s)	1608
BseLI	CCNNNNNNNGG	3 cut(s)	52, 949, 2121
BseMII	CTCAG	2 cut(s)	1683, 1700
BseNI	ACTGG	4 cut(s)	278, 1005, 1578, 1630
BseRI	GAGGAG	2 cut(s)	74, 521
BseSI	GKGCMC	1 cut(s)	1694
BseX3I	CGGCCG	2 cut(s)	47, 97
BseXI	GCAGC	4 cut(s)	12, 2016, 2048, 2051
BseYI	CCCAGC	1 cut(s)	31
Bsh1236I	CGCG	1 cut(s)	217
Bsh1285I	CGRYCG	3 cut(s)	50, 100, 285
BshFI	GGCC	8 cut(s)	49, 99, 381, 1037, 1421, 1499, 1811, 2058
BshVI	ATCGAT	3 cut(s)	132, 173, 1211
BsiEI	CGRYCG	3 cut(s)	50, 100, 285
BsiHKAI	GWGCWC	3 cut(s)	388, 989, 1156
BsiSI	CCGG	5 cut(s)	46, 285, 764, 782, 1254
BslFI	GGGAC	5 cut(s)	292, 414, 780, 1354, 2029
BslI	CCNNNNNNNGG	3 cut(s)	52, 949, 2121
BsmAI	GTCTC	1 cut(s)	572
BsmFI	GGGAC	5 cut(s)	292, 414, 780, 1354, 2029
BsmI	GAATGC	2 cut(s)	1102, 1480
BsnI	GGCC	8 cut(s)	49, 99, 381, 1037, 1421, 1499, 1811, 2058
Bsp119I	TTCGAA	1 cut(s)	1397
Bsp1286I	GDGCHC	5 cut(s)	153, 388, 989, 1156, 1694
Bsp1407I	TGTACA	1 cut(s)	1510
BspACI	CCGC	5 cut(s)	5, 29, 215, 295, 1372
BspANI	GGCC	8 cut(s)	49, 99, 381, 1037, 1421, 1499, 1811, 2058
BspCNI	CTCAG	2 cut(s)	1682, 1699
BspDI	ATCGAT	3 cut(s)	132, 173, 1211
BspFNI	CGCG	1 cut(s)	217
BspHI	TCATGA	1 cut(s)	1359
BspLI	GGNNCC	3 cut(s)	150, 1370, 1698
BspMAI	CTGCAG	1 cut(s)	1427
BspMI	ACCTGC	1 cut(s)	87
BspPI	GGATC	4 cut(s)	419, 797, 910, 2132
BspT104I	TTCGAA	1 cut(s)	1397
BsrGI	TGTACA	1 cut(s)	1510
BsrI	ACTGG	4 cut(s)	278, 1005, 1578, 1630
BssECI	CCNNGG	8 cut(s)	108, 152, 153, 390, 1494, 1733, 2031, 2091
BssNAI	GTATAC	1 cut(s)	940
BssNI	GRCGYC	1 cut(s)	2018
BssSI	CACGAG	1 cut(s)	1155
BssT1I	CCWWGG	3 cut(s)	390, 2031, 2091
Bst1107I	GTATAC	1 cut(s)	940
Bst2BI	CACGAG	1 cut(s)	1155
Bst2UI	CCWGG	5 cut(s)	154, 462, 549, 1645, 1734
Bst4CI	ACNGT	7 cut(s)	315, 468, 665, 697, 713, 978, 1510
BstACI	GRCGYC	1 cut(s)	2018
BstAUI	TGTACA	1 cut(s)	1510
BstBAI	YACGTR	1 cut(s)	865
BstBI	TTCGAA	1 cut(s)	1397
BstC8I	GCNNGC	8 cut(s)	215, 268, 398, 1068, 1376, 1423, 1813, 1885
BstDEI	CTNAG	2 cut(s)	1669, 1686
BstENI	CCTNNNNNAGG	1 cut(s)	947
BstF5I	GGATG	9 cut(s)	120, 193, 357, 454, 922, 940, 1300, 1864, 1885
BstFNI	CGCG	1 cut(s)	217
BstHHI	GCGC	1 cut(s)	84
BstMAI	GTCTC	1 cut(s)	572
BstMCI	CGRYCG	3 cut(s)	50, 100, 285
BstMWI	GCNNNNNNNGC	3 cut(s)	263, 1274, 1817
BstNI	CCWGG	5 cut(s)	154, 462, 549, 1645, 1734
BstNSI	RCATGY	1 cut(s)	927
BstSCI	CCNGG	9 cut(s)	152, 284, 460, 547, 763, 781, 1252, 1643, 1732
BstSFI	CTRYAG	2 cut(s)	373, 1423
BstSLI	GKGCMC	1 cut(s)	1694
BstUI	CGCG	1 cut(s)	217
BstV1I	GCAGC	4 cut(s)	12, 2016, 2048, 2051
BstV2I	GAAGAC	2 cut(s)	365, 756
BstX2I	RGATCY	1 cut(s)	2124
BstXI	CCANNNNNNTGG	1 cut(s)	1616
BstYI	RGATCY	1 cut(s)	2124
BstZ17I	GTATAC	1 cut(s)	940
BstZI	CGGCCG	2 cut(s)	47, 97
Bsu15I	ATCGAT	3 cut(s)	132, 173, 1211
BsuI	GTATCC	1 cut(s)	240
BsuRI	GGCC	8 cut(s)	49, 99, 381, 1037, 1421, 1499, 1811, 2058
BsuTUI	ATCGAT	3 cut(s)	132, 173, 1211
BtgZI	GCGATG	1 cut(s)	1733
BtsCI	GGATG	9 cut(s)	120, 193, 357, 454, 922, 940, 1300, 1864, 1885
BtsI	GCAGTG	1 cut(s)	1339
BtsIMutI	CAGTG	7 cut(s)	473, 1036, 1339, 1916, 1941, 2028, 2125
BveI	ACCTGC	1 cut(s)	87
Cac8I	GCNNGC	8 cut(s)	215, 268, 398, 1068, 1376, 1423, 1813, 1885
CaiI	CAGNNNCTG	2 cut(s)	266, 1745
CciI	TCATGA	1 cut(s)	1359
CfoI	GCGC	1 cut(s)	84
Cfr13I	GGNCC	4 cut(s)	112, 292, 743, 1368
ClaI	ATCGAT	3 cut(s)	132, 173, 1211
Csp6I	GTAC	3 cut(s)	402, 453, 1511
CviQI	GTAC	3 cut(s)	402, 453, 1511
DdeI	CTNAG	2 cut(s)	1669, 1686
EaeI	YGGCCR	2 cut(s)	47, 97
EagI	CGGCCG	2 cut(s)	47, 97
Ecl136II	GAGCTC	2 cut(s)	987, 1154
EclXI	CGGCCG	2 cut(s)	47, 97
Eco130I	CCWWGG	3 cut(s)	390, 2031, 2091
Eco147I	AGGCCT	3 cut(s)	1037, 1421, 1811
Eco24I	GRGCYC	3 cut(s)	153, 989, 1156
Eco32I	GATATC	1 cut(s)	2133
Eco47I	GGWCC	4 cut(s)	112, 292, 743, 1368
Eco52I	CGGCCG	2 cut(s)	47, 97
Eco53kI	GAGCTC	2 cut(s)	987, 1154
Eco57I	CTGAAG	6 cut(s)	537, 570, 1218, 1892, 1965, 2101
EcoICRI	GAGCTC	2 cut(s)	987, 1154
EcoNI	CCTNNNNNAGG	1 cut(s)	947
EcoO109I	RGGNCCY	1 cut(s)	1368
EcoRI	GAATTC	1 cut(s)	1431
EcoRII	CCWGG	5 cut(s)	152, 460, 547, 1643, 1732
EcoRV	GATATC	1 cut(s)	2133
EcoT14I	CCWWGG	3 cut(s)	390, 2031, 2091
EcoT22I	ATGCAT	1 cut(s)	420
EcoT38I	GRGCYC	3 cut(s)	153, 989, 1156
ErhI	CCWWGG	3 cut(s)	390, 2031, 2091
FaqI	GGGAC	5 cut(s)	292, 414, 780, 1354, 2029
FauI	CCCGC	2 cut(s)	222, 1379
FauNDI	CATATG	1 cut(s)	1264
FbaI	TGATCA	4 cut(s)	66, 190, 1048, 1362
FblI	GTMKAC	2 cut(s)	540, 939
Fnu4HI	GCNGC	5 cut(s)	26, 29, 2005, 2037, 2040
FokI	GGATG	9 cut(s)	107, 200, 364, 461, 929, 947, 1307, 1851, 1892
FriOI	GRGCYC	3 cut(s)	153, 989, 1156
Fsp4HI	GCNGC	5 cut(s)	26, 29, 2005, 2037, 2040
FspBI	CTAG	6 cut(s)	857, 1230, 1353, 1701, 1725, 1797
GlaI	GCGC	1 cut(s)	83
GluI	GCNGC	5 cut(s)	26, 29, 2005, 2037, 2040
GsaI	CCCAGC	1 cut(s)	35
GsuI	CTGGAG	2 cut(s)	1188, 1638
HaeIII	GGCC	8 cut(s)	49, 99, 381, 1037, 1421, 1499, 1811, 2058
HapII	CCGG	5 cut(s)	46, 285, 764, 782, 1254
HhaI	GCGC	1 cut(s)	84
Hin1I	GRCGYC	1 cut(s)	2018
Hin6I	GCGC	1 cut(s)	82
HinP1I	GCGC	1 cut(s)	82
HpaII	CCGG	5 cut(s)	46, 285, 764, 782, 1254
HphI	GGTGA	5 cut(s)	831, 864, 1331, 1483, 1722
Hpy166II	GTNNAC	5 cut(s)	541, 872, 929, 940, 1730
Hpy8I	GTNNAC	5 cut(s)	541, 872, 929, 940, 1730
Hpy99I	CGWCG	1 cut(s)	55
HpyAV	CCTTC	6 cut(s)	271, 283, 433, 635, 1469, 2125
HpyCH4III	ACNGT	7 cut(s)	315, 468, 665, 697, 713, 978, 1510
HpyCH4IV	ACGT	3 cut(s)	362, 864, 2018
HpyCH4V	TGCA	8 cut(s)	141, 418, 828, 851, 1066, 1425, 1553, 1898
HpyF10VI	GCNNNNNNNGC	3 cut(s)	263, 1274, 1817
HpyF3I	CTNAG	2 cut(s)	1669, 1686
HpySE526I	ACGT	3 cut(s)	362, 864, 2018
Hsp92I	GRCGYC	1 cut(s)	2018
HspAI	GCGC	1 cut(s)	82
Ksp22I	TGATCA	4 cut(s)	66, 190, 1048, 1362
LmnI	GCTCC	8 cut(s)	61, 148, 391, 442, 463, 992, 1207, 1702
Lsp1109I	GCAGC	4 cut(s)	12, 2016, 2048, 2051
LweI	GCATC	5 cut(s)	253, 1217, 1670, 1870, 2051
MaeI	CTAG	6 cut(s)	857, 1230, 1353, 1701, 1725, 1797
MaeII	ACGT	3 cut(s)	362, 864, 2018
MaeIII	GTNAC	6 cut(s)	218, 1109, 1256, 1334, 1573, 1681
MfeI	CAATTG	1 cut(s)	1306
MflI	RGATCY	1 cut(s)	2124
MhlI	GDGCHC	5 cut(s)	153, 388, 989, 1156, 1694
MluCI	AATT	9 cut(s)	889, 1175, 1288, 1306, 1393, 1431, 1485, 1893, 1990
MlyI	GAGTC	3 cut(s)	29, 992, 1528
MmeI	TCCRAC	2 cut(s)	165, 1857
Mph1103I	ATGCAT	1 cut(s)	420
MslI	CAYNNNNRTG	2 cut(s)	1124, 1332
MspA1I	CMGCKG	2 cut(s)	31, 408
MspI	CCGG	5 cut(s)	46, 285, 764, 782, 1254
MspR9I	CCNGG	9 cut(s)	154, 286, 462, 549, 765, 783, 1254, 1645, 1734
MunI	CAATTG	1 cut(s)	1306
Mva1269I	GAATGC	2 cut(s)	1102, 1480
MvaI	CCWGG	5 cut(s)	154, 462, 549, 1645, 1734
MvnI	CGCG	1 cut(s)	217
MwoI	GCNNNNNNNGC	3 cut(s)	263, 1274, 1817
NciI	CCSGG	4 cut(s)	286, 765, 783, 1254
NdeI	CATATG	1 cut(s)	1264
NlaIV	GGNNCC	3 cut(s)	150, 1370, 1698
NmuCI	GTSAC	3 cut(s)	218, 1334, 1573
NsiI	ATGCAT	1 cut(s)	420
NspI	RCATGY	1 cut(s)	927
NspV	TTCGAA	1 cut(s)	1397
PagI	TCATGA	1 cut(s)	1359
PasI	CCCWGGG	1 cut(s)	153
PceI	AGGCCT	3 cut(s)	1037, 1421, 1811
PciI	ACATGT	1 cut(s)	923
PctI	GAATGC	2 cut(s)	1102, 1480
PfoI	TCCNGGA	2 cut(s)	460, 763
PkrI	GCNGC	5 cut(s)	27, 30, 2006, 2038, 2041
PleI	GAGTC	3 cut(s)	28, 992, 1527
PpsI	GAGTC	3 cut(s)	28, 992, 1527
Ppu21I	YACGTR	1 cut(s)	865
PpuMI	RGGWCCY	1 cut(s)	1368
PscI	ACATGT	1 cut(s)	923
PsiI	TTATAA	1 cut(s)	894
Psp124BI	GAGCTC	2 cut(s)	989, 1156
Psp5II	RGGWCCY	1 cut(s)	1368
Psp6I	CCWGG	5 cut(s)	152, 460, 547, 1643, 1732
PspFI	CCCAGC	1 cut(s)	31
PspGI	CCWGG	5 cut(s)	152, 460, 547, 1643, 1732
PspN4I	GGNNCC	3 cut(s)	150, 1370, 1698
PspPI	GGNCC	4 cut(s)	112, 292, 743, 1368
PspPPI	RGGWCCY	1 cut(s)	1368
PstI	CTGCAG	1 cut(s)	1427
PstNI	CAGNNNCTG	2 cut(s)	266, 1745
PsuI	RGATCY	1 cut(s)	2124
PvuII	CAGCTG	1 cut(s)	408
RsaI	GTAC	3 cut(s)	403, 454, 1512
RsaNI	GTAC	3 cut(s)	402, 453, 1511
RseI	CAYNNNNRTG	2 cut(s)	1124, 1332
SacI	GAGCTC	2 cut(s)	989, 1156
SatI	GCNGC	5 cut(s)	26, 29, 2005, 2037, 2040
Sau96I	GGNCC	4 cut(s)	112, 292, 743, 1368
SchI	GAGTC	3 cut(s)	29, 992, 1528
ScrFI	CCNGG	9 cut(s)	154, 286, 462, 549, 765, 783, 1254, 1645, 1734
SduI	GDGCHC	5 cut(s)	153, 388, 989, 1156, 1694
SfaNI	GCATC	5 cut(s)	253, 1217, 1670, 1870, 2051
SfcI	CTRYAG	2 cut(s)	373, 1423
SfuI	TTCGAA	1 cut(s)	1397
SinI	GGWCC	4 cut(s)	112, 292, 743, 1368
SmiMI	CAYNNNNRTG	2 cut(s)	1124, 1332
SmlI	CTYRAG	3 cut(s)	86, 878, 1380
SmoI	CTYRAG	3 cut(s)	86, 878, 1380
SpeI	ACTAGT	1 cut(s)	1724
Sse9I	AATT	9 cut(s)	889, 1175, 1288, 1306, 1393, 1431, 1485, 1893, 1990
SseBI	AGGCCT	3 cut(s)	1037, 1421, 1811
SsiI	CCGC	5 cut(s)	5, 29, 215, 295, 1372
SspMI	CTAG	6 cut(s)	857, 1230, 1353, 1701, 1725, 1797
SstI	GAGCTC	2 cut(s)	989, 1156
StuI	AGGCCT	3 cut(s)	1037, 1421, 1811
StyD4I	CCNGG	9 cut(s)	152, 284, 460, 547, 763, 781, 1252, 1643, 1732
StyI	CCWWGG	3 cut(s)	390, 2031, 2091
TaaI	ACNGT	7 cut(s)	315, 468, 665, 697, 713, 978, 1510
TaiI	ACGT	3 cut(s)	365, 867, 2021
TaqI	TCGA	8 cut(s)	14, 132, 173, 650, 957, 1211, 1283, 1397
TaqII	GACCGA	1 cut(s)	1145
TasI	AATT	9 cut(s)	889, 1175, 1288, 1306, 1393, 1431, 1485, 1893, 1990
TatI	WGTACW	1 cut(s)	1510
TauI	GCSGC	1 cut(s)	31
TscAI	CASTG	7 cut(s)	473, 1036, 1339, 1923, 1948, 2028, 2125
TseFI	GTSAC	3 cut(s)	218, 1334, 1573
TseI	GCWGC	4 cut(s)	25, 2004, 2036, 2039
Tsp45I	GTSAC	3 cut(s)	218, 1334, 1573
TspGWI	ACGGA	1 cut(s)	68
TspRI	CASTG	7 cut(s)	473, 1036, 1339, 1923, 1948, 2028, 2125
VpaK11BI	GGWCC	4 cut(s)	112, 292, 743, 1368
XagI	CCTNNNNNAGG	1 cut(s)	947
XapI	RAATTY	2 cut(s)	1393, 1431
XceI	RCATGY	1 cut(s)	927
XmiI	GTMKAC	2 cut(s)	540, 939
XspI	CTAG	6 cut(s)	857, 1230, 1353, 1701, 1725, 1797
ZraI	GACGTC	1 cut(s)	2019
Zsp2I	ATGCAT	1 cut(s)	420

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.