Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr06

Orthogroup ID

OG0008594

Physical Location & Seq

Genomic Coordinates Reverse (-)

26695099 .. 26699228

Gene Structure 4130 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD06G1124800.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2553 bp

ATGGCGGAGCTGTCGATGGAATCGCTGCCGTTGGGGTTCCGGTTCAGGCCCACGGACGAGGAGCTCATCAACCACTACCTGCGGCTGAAGATCAATGGCCGTGATTCTGAGGTCCGAGTCATCCCGGAAATCGACGTTTGCAGATGGGAGCCTTGGGATTTGCCAAAATTATCAGTGATAAAGTCAGATGATCAAGAGTGGTTCTTCTTTTGCCCCCGGGATAGGAAGTACCCAAATGGCCATCGGTCAAATAGAGCCACTGATGCTGGATACTGGAAGGCCACAGGGAAGGACCGGACCATAAAGTCCCGTCAGTGCAAGTCTGCTTCTAACAGCAATGGCCAAGTTGGGATGAAGAAGACGTTGGTTTTCTACAGAGGTCGTGCCCCTAAGGGGGAGCGCACCAGCTGGATCATGCACGAGTACCGTGCCACTCAAAAGGAACTCGATGGCACTGGTCCGGGCCAGGGTGCCTTTGTTCTCTGTCGCTTGTTCCATAAACCAGAAGAGAAGGCTGATGTACCAAAGTATGACGAAGTTGAACAAACTGGTTTATCTCCTACCACAACTAAGTCATCTCCTGATGAGTCCTCAGATATAATTCAGGAAACAGCTACATCAGAGATCCAAGGTGAAAATCAGGCAGAAGGTATCATGAGGTGGTTGACTGATAATTCTGACAACGTGACCCCTGATGCTCTCCCACCGCTACCTGACATTTTTATGGCCTCTGATGTGGAAGATCAAGGAGCAGTAGAAACGGGGATCCAGGGCCATCTGACAATAGAAGAAAATCCTGCATTCTATGAGTCTTTGGGCGGCCCGATTGATTGCAAAGTATTCACACCGTTGCATTCGCAGATTAATGCGGAGCTGGAACATTTTATGGGTTCACCTTTTACCAGTGACTTTGGCAATTATGATAATGGATTGTATTTTCAGGACGGCACATGTGAACAGGATGTATCCCTCACAGAGTTGTTGGATGAGTTCGGCAATAGCCATTATGAGAGCTCTTGTGAGGAGTCAACAAGTCAGAAGAACTTGGTCGTTGGAAATGAGACCTATTTATCTGGTAATGCGTGCACCACGCTGCCAGTAAACTCGTGTTTCAATGGTGCATGGGATAACACGGACGCCAATATCACCCAGCATGATCTGCAAAGGATGGCATCTGGCTTGTACAATGAGCAATTTGGTTCCGATGATTTGCAGAACACCTCATTTGGTTATTGGCAAGCTGAAGCCCAAGCATCGCTTGATGACCAAAAACCTAGAATGGGAAATATGGCGGACGGTTATTTATCTGAATGCTCATTTGCTGAGCAATTTCCTGTGAGTTCAGTCGATGATGGTTTGGATGATTCTACAAGTTGGAACCACGGTGTTGACCATGTTGGTGGAACTGGAATCAAGATTAGGGCTCGTGGTCCTCAACTACAACCAAATACAGATAACTTTGTATATCAGGGCACTGCTGCAAGAAGAATTTATTTATCAGTGGACCGTTCATCTGGGTCAAATACCAATGGCAATGAGGGCAATGAAAACTACAGCAGGGAAGAAGATGAAGTCCAATCAACTATTACACAGCCTAGAGAGGATATAGGGCAGAGTCCTACTTCTGATGAACAGGAGGAAGAGCATGCAATATTCAACGACAAAGAAGAATTATCCGGAAGGAATAATTCTATTAACAATGGTTGTGATCCTGATGGTAGAAGTAGAATCATGATTAGGACTCGGCAGCCTCAACAACGATCAAATTCAGACAGTTCAGTAACTCAAGGCACTGCTCCTAGAAGGATCCGTTTGCAGATGAATATTTCATCTGGGTCCATTGCTGATAGTAATGTGAGAGACACAGATGACGGGGGAGAAGATGAAGTACAATCAACTAATACTGAGGCTAGAGAAGCAATACAGCAGAGTCTGACCTCAGATGAACAGGAGAAAGGGCATGCAGAAATCAATAATGAAGACTTGGCCACTATGAAGAATTCCGTCAGCTATGGTTCTGATGTTGGTAGAACTGGAATCAAGACCAAGGCCCCCGAGCCTCAACAACCATTAAGTTCAGATGATTTTGTAACTCAGGGCACTGCTCCTAGAAGAATCGGTTTGCAGATGAAAAGTTCACCTTGGTCAGTTGCTGATAGCAATGTGAGAGATACAACCCCTGGTGAAGAAGATAATGTACAGTCAACTATTCATGAGGTCAAAGAAGCCAGAGAGAAGATTTGTAATTTCGATGAGCAAGATGCAGAGTCCCATCTTTCGAAGTCAGACGTGAACAGGAAAATAATTGATGATTCACCAACAGAACTGGTTGATGAGAGCAGTGGAACTGCTGGAGAAGCCCCAAGAAAAGTAAGGTTAAGGACAGCAAGGGACGATGCATTACCCAGCAACCATATCGGGAAGTCAATGCCTTCAAAGACACTGCCTAAGGGCCACGGCCTGAGTCCTACATTTGTTATTTCGGTTGGTATTCCTTTAGCTGTAACCCTGTTCGTTGCGTTTAGTGGGATTTGGATGACATTTAGACCTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001067 GO:0002831 GO:0002833 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005783 GO:0005789 GO:0005886 GO:0006355 GO:0006950 GO:0006970 GO:0008150 GO:0009314 GO:0009416 GO:0009628 GO:0009642 GO:0009644 GO:0009889 GO:0009890 GO:0009891 GO:0009892 GO:0009893 GO:0009962 GO:0009987 GO:0010468 GO:0010556 GO:0010557 GO:0010558 GO:0010604 GO:0010605 GO:0010628 GO:0010629 GO:0012505 GO:0016020 GO:0019219 GO:0019222 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031328 GO:0031347 GO:0031349 GO:0031984 GO:0032101 GO:0032103 GO:0033554 GO:0042175 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043900 GO:0043902 GO:0044212 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0045892 GO:0045893 GO:0045934 GO:0045935 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048583 GO:0048584 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051173 GO:0051252 GO:0051253 GO:0051254 GO:0051716 GO:0060255 GO:0065007 GO:0071214 GO:0071470 GO:0071944 GO:0080090 GO:0080134 GO:0097159 GO:0098827 GO:0104004 GO:0140110 GO:1900424 GO:1900426 GO:1901363 GO:1902679 GO:1902680 GO:1903506 GO:1903507 GO:1903508 GO:2000112 GO:2000113 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

NAM

Protein Analysis

851

Amino Acids

94.18

Weight (kDa)

4.68

Isoelectric Point (pI)

45.46

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NAM	PF02365	10 - 143	2.8e-47	No apical meristem (NAM) protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0008594)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G33060 AT1G33060 AT4G35580 AT4G35580 AT4G35580
fragaria_vesca	FvH4_5g10350 FvH4_5g10350
malus_domestica	MD00G1096600.v1.1 MD06G1124800.v1.1
prunus_persica	Prupe.5G135400_v2.0.a1 Prupe.5G135400_v2.0.a1
pyrus_communis	pycom06g11540 pycom14g11690
rosa_chinensis	RchiOBHm_Chr7g0187871
rosa_laevigata	RLG00000004751
rosa_multiflora	Rmu_ssc0000122.1_g000021
rosa_roxburghii	Rroxscaffold_3G00266990
rosa_rugosa	Rorug06G0484900
rosa_samantha	Rh7AG090100 Rh7BG091700 Rh7CG090800 Rh7DG092500
rosa_wichuraiana	Rw7G007780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	304
Acc36I	ACCTGC	1 cut(s)	87
AccB1I	GGYRCC	1 cut(s)	470
AccIII	TCCGGA	1 cut(s)	1676
AciI	CCGC	6 cut(s)	5, 82, 707, 819, 869, 1292
AclWI	GGATC	7 cut(s)	419, 619, 760, 773, 1703, 1801, 1814
AcoI	YGGCCR	4 cut(s)	97, 238, 340, 1986
AcsI	RAATTY	3 cut(s)	1488, 1765, 1999
AcuI	CTGAAG	2 cut(s)	107, 1263
AcyI	GRCGYC	1 cut(s)	1137
AfaI	GTAC	6 cut(s)	230, 425, 522, 1184, 1890, 2199
AfiI	CCNNNNNNNGG	5 cut(s)	222, 393, 394, 467, 1280
AflIII	ACRYGT	1 cut(s)	950
AgsI	TTSAA	4 cut(s)	542, 1114, 1657, 2436
AjiI	CACGTC	1 cut(s)	2290
AjnI	CCWGG	3 cut(s)	465, 768, 2179
AjuI	GAANNNNNNNTTGG	2 cut(s)	347, 379
AluBI	AGCT	9 cut(s)	10, 64, 408, 614, 874, 1014, 1241, 2010, 2501
AluI	AGCT	9 cut(s)	10, 64, 408, 614, 874, 1014, 1241, 2010, 2501
Alw21I	GWGCWC	3 cut(s)	66, 1016, 1088
Alw26I	GTCTC	2 cut(s)	1055, 1854
Alw44I	GTGCAC	1 cut(s)	1084
AlwI	GGATC	7 cut(s)	419, 619, 760, 773, 1703, 1801, 1814
AlwNI	CAGNNNCTG	2 cut(s)	1933, 2153
Ama87I	CYCGRG	2 cut(s)	216, 2054
Aor13HI	TCCGGA	1 cut(s)	1676
ApaLI	GTGCAC	1 cut(s)	1084
ApeKI	GCWGC	4 cut(s)	25, 1093, 1478, 1747
ApoI	RAATTY	3 cut(s)	1488, 1765, 1999
AseI	ATTAAT	1 cut(s)	864
AspLEI	GCGC	1 cut(s)	402
AsuC2I	CCSGG	4 cut(s)	125, 217, 218, 462
AsuHPI	GGTGA	6 cut(s)	644, 885, 1138, 2130, 2195, 2307
AsuII	TTCGAA	1 cut(s)	2279
AvaI	CYCGRG	2 cut(s)	216, 2054
AvaII	GGWCC	7 cut(s)	112, 292, 297, 458, 1430, 1504, 1836
AxyI	CCTNAGG	2 cut(s)	390, 2448
BaeGI	GKGCMC	4 cut(s)	388, 1088, 1475, 2102
BalI	TGGCCA	3 cut(s)	240, 342, 1988
BamHI	GGATCC	2 cut(s)	765, 1806
BanI	GGYRCC	1 cut(s)	470
BanII	GRGCYC	3 cut(s)	66, 1016, 1426
BarI	GAAGNNNNNNTAC	4 cut(s)	1872, 1904, 2181, 2213
BauI	CACGAG	3 cut(s)	419, 1105, 1425
BbsI	GAAGAC	2 cut(s)	365, 1986
Bbv12I	GWGCWC	3 cut(s)	66, 1016, 1088
BbvI	GCAGC	4 cut(s)	12, 1080, 1465, 1759
BccI	CCATC	9 cut(s)	10, 138, 249, 443, 783, 1162, 1346, 1709, 2280
BceAI	ACGGC	4 cut(s)	13, 84, 961, 2473
BcgI	CGANNNNNNTGC	4 cut(s)	410, 444, 2398, 2432
BciT130I	CCWGG	3 cut(s)	467, 770, 2181
BciVI	GTATCC	2 cut(s)	263, 976
BclI	TGATCA	1 cut(s)	190
BcnI	CCSGG	4 cut(s)	125, 217, 218, 462
BcoDI	GTCTC	2 cut(s)	1055, 1854
BfaI	CTAG	5 cut(s)	1275, 1596, 1800, 1911, 2109
BfmI	CTRYAG	2 cut(s)	373, 1552
BfuAI	ACCTGC	1 cut(s)	87
BfuI	GTATCC	2 cut(s)	263, 976
BisI	GCNGC	6 cut(s)	26, 83, 820, 1094, 1479, 1748
BlpI	GCTNAGC	1 cut(s)	1323
BlsI	GCNGC	6 cut(s)	27, 84, 821, 1095, 1480, 1749
Bme1390I	CCNGG	7 cut(s)	125, 217, 218, 462, 467, 770, 2181
Bme18I	GGWCC	7 cut(s)	112, 292, 297, 458, 1430, 1504, 1836
BmeT110I	CYCGRG	2 cut(s)	216, 2054
BmgBI	CACGTC	1 cut(s)	2290
BmiI	GGNNCC	9 cut(s)	38, 150, 472, 767, 1201, 1379, 1808, 1837, 2052
BmrFI	CCNGG	7 cut(s)	125, 217, 218, 462, 467, 770, 2181
BmsI	GCATC	6 cut(s)	253, 685, 1181, 1262, 2251, 2386
BpiI	GAAGAC	2 cut(s)	365, 1986
BpmI	CTGGAG	1 cut(s)	2373
Bpu1102I	GCTNAGC	1 cut(s)	1323
Bpu14I	TTCGAA	1 cut(s)	2279
BpuEI	CTTGAG	1 cut(s)	1770
BpuMI	CCSGG	4 cut(s)	125, 217, 218, 462
BsaHI	GRCGYC	1 cut(s)	1137
BsaI	GGTCTC	1 cut(s)	1055
BsaWI	WCCGGW	3 cut(s)	39, 294, 1676
Bsc4I	CCNNNNNNNGG	5 cut(s)	222, 393, 394, 467, 1280
Bse1I	ACTGG	8 cut(s)	278, 460, 553, 903, 1097, 1411, 2038, 2331
Bse21I	CCTNAGG	2 cut(s)	390, 2448
Bse3DI	GCAATG	5 cut(s)	343, 1540, 1549, 1839, 2167
BseAI	TCCGGA	1 cut(s)	1676
BseBI	CCWGG	3 cut(s)	467, 770, 2181
BseGI	GGATG	7 cut(s)	120, 357, 967, 991, 1173, 1366, 2541
BseLI	CCNNNNNNNGG	5 cut(s)	222, 393, 394, 467, 1280
BseMI	GCAATG	5 cut(s)	343, 1540, 1549, 1839, 2167
BseMII	CTCAG	7 cut(s)	99, 606, 1314, 1896, 1953, 2108, 2453
BseNI	ACTGG	8 cut(s)	278, 460, 553, 903, 1097, 1411, 2038, 2331
BseRI	GAGGAG	2 cut(s)	74, 1037
BseSI	GKGCMC	4 cut(s)	388, 1088, 1475, 2102
BseXI	GCAGC	4 cut(s)	12, 1080, 1465, 1759
BseYI	CCCAGC	2 cut(s)	1149, 2405
BshNI	GGYRCC	1 cut(s)	470
BsiHKAI	GWGCWC	3 cut(s)	66, 1016, 1088
BsiHKCI	CYCGRG	2 cut(s)	216, 2054
BsiSI	CCGG	6 cut(s)	40, 125, 217, 295, 461, 1677
BslFI	GGGAC	3 cut(s)	292, 2254, 2405
BslI	CCNNNNNNNGG	5 cut(s)	222, 393, 394, 467, 1280
BsmAI	GTCTC	2 cut(s)	1055, 1854
BsmFI	GGGAC	3 cut(s)	292, 2254, 2405
BsmI	GAATGC	3 cut(s)	800, 853, 1316
Bso31I	GGTCTC	1 cut(s)	1055
BsoBI	CYCGRG	2 cut(s)	216, 2054
Bsp119I	TTCGAA	1 cut(s)	2279
Bsp1286I	GDGCHC	7 cut(s)	66, 388, 1016, 1088, 1426, 1475, 2102
Bsp13I	TCCGGA	1 cut(s)	1676
Bsp1407I	TGTACA	2 cut(s)	1182, 2197
Bsp1720I	GCTNAGC	1 cut(s)	1323
BspACI	CCGC	6 cut(s)	5, 82, 707, 819, 869, 1292
BspCNI	CTCAG	7 cut(s)	100, 605, 1315, 1897, 1952, 2107, 2454
BspEI	TCCGGA	1 cut(s)	1676
BspHI	TCATGA	3 cut(s)	654, 1731, 2212
BspLI	GGNNCC	9 cut(s)	38, 150, 472, 767, 1201, 1379, 1808, 1837, 2052
BspMI	ACCTGC	1 cut(s)	87
BspPI	GGATC	7 cut(s)	419, 619, 760, 773, 1703, 1801, 1814
BspQI	GCTCTTC	1 cut(s)	1635
BspT104I	TTCGAA	1 cut(s)	2279
BspT107I	GGYRCC	1 cut(s)	470
BspTNI	GGTCTC	1 cut(s)	1055
BsrDI	GCAATG	5 cut(s)	343, 1540, 1549, 1839, 2167
BsrGI	TGTACA	2 cut(s)	1182, 2197
BsrI	ACTGG	8 cut(s)	278, 460, 553, 903, 1097, 1411, 2038, 2331
BssNI	GRCGYC	1 cut(s)	1137
BssSI	CACGAG	3 cut(s)	419, 1105, 1425
BssT1I	CCWWGG	4 cut(s)	152, 628, 2046, 2141
Bst2BI	CACGAG	3 cut(s)	419, 1105, 1425
Bst2UI	CCWGG	3 cut(s)	467, 770, 2181
Bst4CI	ACNGT	7 cut(s)	428, 849, 1298, 1385, 1508, 1775, 2202
Bst6I	CTCTTC	2 cut(s)	501, 1635
BstACI	GRCGYC	1 cut(s)	1137
BstAPI	GCANNNNNTGC	1 cut(s)	1159
BstAUI	TGTACA	2 cut(s)	1182, 2197
BstBI	TTCGAA	1 cut(s)	2279
BstC8I	GCNNGC	4 cut(s)	1084, 1239, 1647, 1962
BstDSI	CCRYGG	3 cut(s)	51, 1381, 2455
BstF5I	GGATG	7 cut(s)	120, 357, 967, 991, 1173, 1366, 2541
BstHHI	GCGC	1 cut(s)	402
BstMAI	GTCTC	2 cut(s)	1055, 1854
BstMWI	GCNNNNNNNGC	5 cut(s)	263, 1159, 1539, 1916, 2357
BstNI	CCWGG	3 cut(s)	467, 770, 2181
BstNSI	RCATGY	3 cut(s)	954, 1649, 1964
BstSCI	CCNGG	7 cut(s)	123, 215, 216, 460, 465, 768, 2179
BstSFI	CTRYAG	2 cut(s)	373, 1552
BstSLI	GKGCMC	4 cut(s)	388, 1088, 1475, 2102
BstV1I	GCAGC	4 cut(s)	12, 1080, 1465, 1759
BstV2I	GAAGAC	2 cut(s)	365, 1986
BstX2I	RGATCY	3 cut(s)	624, 765, 1806
BstXI	CCANNNNNNTGG	1 cut(s)	1400
BstYI	RGATCY	3 cut(s)	624, 765, 1806
Bsu36I	CCTNAGG	2 cut(s)	390, 2448
BsuI	GTATCC	2 cut(s)	263, 976
BtgI	CCRYGG	3 cut(s)	51, 1381, 2455
BtgZI	GCGATG	1 cut(s)	1239
BtrI	CACGTC	1 cut(s)	2290
BtsCI	GGATG	7 cut(s)	120, 357, 967, 991, 1173, 1366, 2541
BtsI	GCAGTG	5 cut(s)	1473, 1791, 2100, 2347, 2441
BveI	ACCTGC	1 cut(s)	87
Cac8I	GCNNGC	4 cut(s)	1084, 1239, 1647, 1962
CaiI	CAGNNNCTG	2 cut(s)	1933, 2153
CciI	TCATGA	3 cut(s)	654, 1731, 2212
CfoI	GCGC	1 cut(s)	402
Cfr9I	CCCGGG	1 cut(s)	216
CseI	GACGC	1 cut(s)	1145
Csp6I	GTAC	6 cut(s)	229, 424, 521, 1183, 1889, 2198
CviQI	GTAC	6 cut(s)	229, 424, 521, 1183, 1889, 2198
DrdI	GACNNNNNNGTC	1 cut(s)	304
DseDI	GACNNNNNNGTC	1 cut(s)	304
EaeI	YGGCCR	4 cut(s)	97, 238, 340, 1986
Eam1104I	CTCTTC	2 cut(s)	501, 1635
EarI	CTCTTC	2 cut(s)	501, 1635
EciI	GGCGGA	2 cut(s)	20, 1307
Ecl136II	GAGCTC	2 cut(s)	64, 1014
Eco130I	CCWWGG	4 cut(s)	152, 628, 2046, 2141
Eco24I	GRGCYC	3 cut(s)	66, 1016, 1426
Eco31I	GGTCTC	1 cut(s)	1055
Eco47I	GGWCC	7 cut(s)	112, 292, 297, 458, 1430, 1504, 1836
Eco53kI	GAGCTC	2 cut(s)	64, 1014
Eco57I	CTGAAG	2 cut(s)	107, 1263
Eco81I	CCTNAGG	2 cut(s)	390, 2448
Eco88I	CYCGRG	2 cut(s)	216, 2054
EcoICRI	GAGCTC	2 cut(s)	64, 1014
EcoO109I	RGGNCCY	1 cut(s)	2050
EcoRI	GAATTC	1 cut(s)	1999
EcoRII	CCWGG	3 cut(s)	465, 768, 2179
EcoT14I	CCWWGG	4 cut(s)	152, 628, 2046, 2141
EcoT22I	ATGCAT	1 cut(s)	2401
EcoT38I	GRGCYC	3 cut(s)	66, 1016, 1426
ErhI	CCWWGG	4 cut(s)	152, 628, 2046, 2141
FalI	AAGNNNNNCTT	4 cut(s)	1242, 1274, 2125, 2157
FaqI	GGGAC	3 cut(s)	292, 2254, 2405
FbaI	TGATCA	1 cut(s)	190
Fnu4HI	GCNGC	6 cut(s)	26, 83, 820, 1094, 1479, 1748
FokI	GGATG	7 cut(s)	107, 364, 974, 998, 1180, 1373, 2548
FriOI	GRGCYC	3 cut(s)	66, 1016, 1426
Fsp4HI	GCNGC	6 cut(s)	26, 83, 820, 1094, 1479, 1748
FspBI	CTAG	5 cut(s)	1275, 1596, 1800, 1911, 2109
GlaI	GCGC	1 cut(s)	401
GluI	GCNGC	6 cut(s)	26, 83, 820, 1094, 1479, 1748
GsaI	CCCAGC	2 cut(s)	1153, 2409
GsuI	CTGGAG	1 cut(s)	2373
HapII	CCGG	6 cut(s)	40, 125, 217, 295, 461, 1677
HgaI	GACGC	1 cut(s)	1145
HhaI	GCGC	1 cut(s)	402
Hin1I	GRCGYC	1 cut(s)	1137
Hin6I	GCGC	1 cut(s)	400
HinP1I	GCGC	1 cut(s)	400
HincII	GTYRAC	4 cut(s)	666, 1029, 1390, 2205
HindII	GTYRAC	4 cut(s)	666, 1029, 1390, 2205
HpaII	CCGG	6 cut(s)	40, 125, 217, 295, 461, 1677
HphI	GGTGA	6 cut(s)	644, 885, 1138, 2130, 2195, 2307
Hpy99I	CGWCG	1 cut(s)	137
HpyAV	CCTTC	7 cut(s)	271, 283, 505, 641, 1674, 1797, 2442
HpyCH4III	ACNGT	7 cut(s)	428, 849, 1298, 1385, 1508, 1775, 2202
HpyCH4IV	ACGT	4 cut(s)	135, 362, 684, 2289
HpyF10VI	GCNNNNNNNGC	5 cut(s)	263, 1159, 1539, 1916, 2357
HpySE526I	ACGT	4 cut(s)	135, 362, 684, 2289
Hsp92I	GRCGYC	1 cut(s)	1137
HspAI	GCGC	1 cut(s)	400
Kpn2I	TCCGGA	1 cut(s)	1676
Ksp22I	TGATCA	1 cut(s)	190
LguI	GCTCTTC	1 cut(s)	1635
LmnI	GCTCC	8 cut(s)	7, 61, 148, 397, 749, 871, 1801, 2110
Lsp1109I	GCAGC	4 cut(s)	12, 1080, 1465, 1759
LweI	GCATC	6 cut(s)	253, 685, 1181, 1262, 2251, 2386
MaeI	CTAG	5 cut(s)	1275, 1596, 1800, 1911, 2109
MaeII	ACGT	4 cut(s)	135, 362, 684, 2289
MaeIII	GTNAC	5 cut(s)	685, 905, 1780, 2089, 2503
MflI	RGATCY	3 cut(s)	624, 765, 1806
MhlI	GDGCHC	7 cut(s)	66, 388, 1016, 1088, 1426, 1475, 2102
MlsI	TGGCCA	3 cut(s)	240, 342, 1988
MluNI	TGGCCA	3 cut(s)	240, 342, 1988
MlyI	GAGTC	9 cut(s)	126, 596, 818, 1034, 1624, 1735, 1939, 2276, 2473
MmeI	TCCRAC	3 cut(s)	963, 1033, 1355
Mox20I	TGGCCA	3 cut(s)	240, 342, 1988
Mph1103I	ATGCAT	1 cut(s)	2401
MroI	TCCGGA	1 cut(s)	1676
MscI	TGGCCA	3 cut(s)	240, 342, 1988
MseI	TTAA	4 cut(s)	864, 1695, 2072, 2378
MslI	CAYNNNNRTG	2 cut(s)	722, 1398
Msp20I	TGGCCA	3 cut(s)	240, 342, 1988
MspA1I	CMGCKG	1 cut(s)	408
MspI	CCGG	6 cut(s)	40, 125, 217, 295, 461, 1677
MspR9I	CCNGG	7 cut(s)	125, 217, 218, 462, 467, 770, 2181
Mva1269I	GAATGC	3 cut(s)	800, 853, 1316
MvaI	CCWGG	3 cut(s)	467, 770, 2181
MwoI	GCNNNNNNNGC	5 cut(s)	263, 1159, 1539, 1916, 2357
NciI	CCSGG	4 cut(s)	125, 217, 218, 462
NlaIV	GGNNCC	9 cut(s)	38, 150, 472, 767, 1201, 1379, 1808, 1837, 2052
NmeAIII	GCCGAG	1 cut(s)	1723
NmuCI	GTSAC	2 cut(s)	685, 905
NsiI	ATGCAT	1 cut(s)	2401
NspI	RCATGY	3 cut(s)	954, 1649, 1964
NspV	TTCGAA	1 cut(s)	2279
PaeI	GCATGC	2 cut(s)	1649, 1964
PagI	TCATGA	3 cut(s)	654, 1731, 2212
PciI	ACATGT	1 cut(s)	950
PciSI	GCTCTTC	1 cut(s)	1635
PctI	GAATGC	3 cut(s)	800, 853, 1316
PfeI	GAWTC	8 cut(s)	20, 104, 1364, 1410, 1728, 2037, 2115, 2312
PfoI	TCCNGGA	1 cut(s)	123
PkrI	GCNGC	6 cut(s)	27, 84, 821, 1095, 1480, 1749
PleI	GAGTC	9 cut(s)	125, 595, 817, 1033, 1623, 1735, 1938, 2275, 2472
PpsI	GAGTC	9 cut(s)	125, 595, 817, 1033, 1623, 1735, 1938, 2275, 2472
PscI	ACATGT	1 cut(s)	950
PshBI	ATTAAT	1 cut(s)	864
Psp124BI	GAGCTC	2 cut(s)	66, 1016
Psp6I	CCWGG	3 cut(s)	465, 768, 2179
PspFI	CCCAGC	2 cut(s)	1149, 2405
PspGI	CCWGG	3 cut(s)	465, 768, 2179
PspN4I	GGNNCC	9 cut(s)	38, 150, 472, 767, 1201, 1379, 1808, 1837, 2052
PstNI	CAGNNNCTG	2 cut(s)	1933, 2153
PsuI	RGATCY	3 cut(s)	624, 765, 1806
PvuII	CAGCTG	1 cut(s)	408
RsaI	GTAC	6 cut(s)	230, 425, 522, 1184, 1890, 2199
RsaNI	GTAC	6 cut(s)	229, 424, 521, 1183, 1889, 2198
RseI	CAYNNNNRTG	2 cut(s)	722, 1398
SacI	GAGCTC	2 cut(s)	66, 1016
SapI	GCTCTTC	1 cut(s)	1635
SaqAI	TTAA	4 cut(s)	864, 1695, 2072, 2378
SatI	GCNGC	6 cut(s)	26, 83, 820, 1094, 1479, 1748
SchI	GAGTC	9 cut(s)	126, 596, 818, 1034, 1624, 1735, 1939, 2276, 2473
ScrFI	CCNGG	7 cut(s)	125, 217, 218, 462, 467, 770, 2181
SduI	GDGCHC	7 cut(s)	66, 388, 1016, 1088, 1426, 1475, 2102
SfaNI	GCATC	6 cut(s)	253, 685, 1181, 1262, 2251, 2386
SfcI	CTRYAG	2 cut(s)	373, 1552
SfuI	TTCGAA	1 cut(s)	2279
SinI	GGWCC	7 cut(s)	112, 292, 297, 458, 1430, 1504, 1836
SmaI	CCCGGG	1 cut(s)	218
SmiMI	CAYNNNNRTG	2 cut(s)	722, 1398
SmlI	CTYRAG	1 cut(s)	1785
SmoI	CTYRAG	1 cut(s)	1785
SphI	GCATGC	2 cut(s)	1649, 1964
SsiI	CCGC	6 cut(s)	5, 82, 707, 819, 869, 1292
SspI	AATATT	2 cut(s)	1653, 1825
SspMI	CTAG	5 cut(s)	1275, 1596, 1800, 1911, 2109
SstI	GAGCTC	2 cut(s)	66, 1016
StyD4I	CCNGG	7 cut(s)	123, 215, 216, 460, 465, 768, 2179
StyI	CCWWGG	4 cut(s)	152, 628, 2046, 2141
TaaI	ACNGT	7 cut(s)	428, 849, 1298, 1385, 1508, 1775, 2202
TaiI	ACGT	4 cut(s)	138, 365, 687, 2292
TaqI	TCGA	6 cut(s)	14, 132, 447, 1347, 2250, 2279
TaqII	GACCGA	1 cut(s)	234
TatI	WGTACW	3 cut(s)	1182, 1888, 2197
TauI	GCSGC	2 cut(s)	85, 822
TfiI	GAWTC	8 cut(s)	20, 104, 1364, 1410, 1728, 2037, 2115, 2312
Tru1I	TTAA	4 cut(s)	864, 1695, 2072, 2378
Tru9I	TTAA	4 cut(s)	864, 1695, 2072, 2378
TseFI	GTSAC	2 cut(s)	685, 905
TseI	GCWGC	4 cut(s)	25, 1093, 1478, 1747
Tsp45I	GTSAC	2 cut(s)	685, 905
TspGWI	ACGGA	4 cut(s)	68, 1148, 1799, 1993
TspMI	CCCGGG	1 cut(s)	216
VneI	GTGCAC	1 cut(s)	1084
VpaK11BI	GGWCC	7 cut(s)	112, 292, 297, 458, 1430, 1504, 1836
VspI	ATTAAT	1 cut(s)	864
XapI	RAATTY	3 cut(s)	1488, 1765, 1999
XceI	RCATGY	3 cut(s)	954, 1649, 1964
XmaI	CCCGGG	1 cut(s)	216
XspI	CTAG	5 cut(s)	1275, 1596, 1800, 1911, 2109
Zsp2I	ATGCAT	1 cut(s)	2401

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.