Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr7D

Orthogroup ID

OG0008594

Physical Location & Seq

Genomic Coordinates Reverse (-)

7761181 .. 7766955

Gene Structure 5775 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh7DG092500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1968 bp

ATGATAAAGTCGGATGATCAGGAATGGTTCTTCTTCTGCCCGCGTGACAGGAAGTATCCGAATGGTCATCGTTCCAATAGAGCCACAGATGCTGGCTACTGGAAGGCGACCGGGAAGGACCGCACCATCAAGTCCCGACAGTTCAAGTCTGCTACTAATAACACGGGCTTGGTTGGGATGAAGAAGACGTTGGTTTTCTACAGAGGCCGTGCTCCCAAGGGCGAGCGTACCAGCTGGATCATGCATGAGTATCGTCCCACCCAGAAGGAGCTGGATGGTACTGCTCCTGGACAGTGTGCCTTTGTTCTGTGTCGCCTGTTTCATAAACCAGAGGAGAAATCTGAAGTTCTAAAGTATGATGAAGTAGACCAACCTGGCTTATCTCCTACCACCTCTCCTGATGAGACATCTTCAGATATAGTTCAGGAATCAGCTACCCCAGATATGAAAGGTGGAAAGGAATCAGAAGGTATATCGAGCTGGAATGACAGTTTTGACCACATGACCCCTGATACTCTGACTGTGCCACCTAATGACAGTTATATGGCTTCTGATGTGGAAGTCTATGGACCAGAAGACACAATCTTTCCGGGACATTATCATCTGCCGGGAGAAGTGGGGTTCTATGATCCCAATGAACCCACGATTGACTGCAAAATCTTTTCACCATTCAATGCAGAGCTAGATTACGTGGGTTCACCTCTTGAGTTTGGCAATTATAACAATGGATCGCATTTTCTGGATGGCACATGTGAACAGGATGTATACCTCCCAGAGGTGTTCGATGAGTTTGGCAATAAACAGTATGAGAGCTCCTGCGAGGACTCAACCAGTCAGAAGAACTTGGTTGGGGTCAGTGAGGCCTATCTATCTGATCATTCATTCATGTTGCAAGCCATACCACCAGAAAACTTATCGCTGAATGCTTCATGGGGTTACGCAGACACCAAAATGACCGAGCGTTATCTGGACATGAGAGCTCGTGGCTTGTCCAATGAGCAATTTGATACTTCCTACCAAGCTGAAGCTCCAGCATCGATTTATGACCATAAACCTAGAATGGAAAATATCGGTTATCCCGGTAACTCATATGCTGATTCTGCTGTGTCGAATAATTTGGATGAATCTACCAATTGGAAGAATGGTGATAACCATAGCAGTGACCAAGTTGATAGACCTAGAATCATGATCAGGTCCCGCCTGCCTCAAGAACGACCAAATTCGAACTTTTTGAATCAGGGAGAGGCCTGCAGAAGAATTCGTTTAGCAGTTCTTTCAAACCATAGCAAAGAAGAAGATGAAGGGCATTCAATTATCACCGAGGCCAGAGAAACTGTACAGGAGAGTCTTACCTCTGATGAACGGGAGGAAGTTCATGCAATAAACGATGAGGAAGAAGTGACCAGTAGGGATTATTCTGCTAACAATGATTCCCATCTTGTTGGTAAAACTGGAATCAGTTGTAATACCAGGCAACCTCCAGAGGCATCAAACTCAGACAAACCCGTTACTCAGGGCACGGCTCCTAGAAGAAACGACTTGGCGATGACTAGTTCACCTGGGTCAGTTGCTGATAGTAATGTGAGAGATACAAAGCATGGGCAAGAAGATGAAGTGGAATCTAGTATTATTGAGGCCTGCGAAGCCATAGAGAAAACTCCTAATCTGAACAAGCAGGAGGTGGAGTGTCATCCTCTGAAGTTGGATGCGAGCAGGAAAATTGCAGAAGAACCCTCAACAACACTGATTGATGAGAAGAAGAAAACCACTGAAGAAGTCGCAACAAAGATCAGGTCAAGGACGGGAGGGAATGATAATTCATTACATAGCAGCCATATTGGGACGTCAGTGCGTTCCAAGGCAGCAGCATCTAAATATCATGGCCTGATTATCTTCATTATTTCAGTTGGGATTCCCTTGGTTCTAACCATGTTCATAGCCTTCAGTGGGATCTGGATATCCCATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001067 GO:0002831 GO:0002833 GO:0003674 GO:0003676 GO:0003677 GO:0003700 GO:0005488 GO:0005515 GO:0005516 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005783 GO:0005789 GO:0005886 GO:0006355 GO:0006950 GO:0006970 GO:0008150 GO:0009314 GO:0009416 GO:0009628 GO:0009642 GO:0009644 GO:0009889 GO:0009890 GO:0009891 GO:0009892 GO:0009893 GO:0009962 GO:0009987 GO:0010468 GO:0010556 GO:0010557 GO:0010558 GO:0010604 GO:0010605 GO:0010628 GO:0010629 GO:0012505 GO:0016020 GO:0019219 GO:0019222 GO:0031323 GO:0031324 GO:0031325 GO:0031326 GO:0031327 GO:0031328 GO:0031347 GO:0031349 GO:0031984 GO:0032101 GO:0032103 GO:0033554 GO:0042175 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043900 GO:0043902 GO:0044212 GO:0044422 GO:0044424 GO:0044425 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0045892 GO:0045893 GO:0045934 GO:0045935 GO:0048518 GO:0048519 GO:0048522 GO:0048523 GO:0048583 GO:0048584 GO:0050789 GO:0050794 GO:0050896 GO:0051171 GO:0051172 GO:0051173 GO:0051252 GO:0051253 GO:0051254 GO:0051716 GO:0060255 GO:0065007 GO:0071214 GO:0071470 GO:0071944 GO:0080090 GO:0080134 GO:0097159 GO:0098827 GO:0104004 GO:0140110 GO:1900424 GO:1900426 GO:1901363 GO:1902679 GO:1902680 GO:1903506 GO:1903507 GO:1903508 GO:2000112 GO:2000113 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

NAM

Protein Analysis

655

Amino Acids

73.19

Weight (kDa)

4.99

Isoelectric Point (pI)

45.1

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
NAM	PF02365	4 - 85	2.1e-25	No apical meristem (NAM) protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0008594)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G33060 AT1G33060 AT4G35580 AT4G35580 AT4G35580
fragaria_vesca	FvH4_5g10350 FvH4_5g10350
malus_domestica	MD00G1096600.v1.1 MD06G1124800.v1.1
prunus_persica	Prupe.5G135400_v2.0.a1 Prupe.5G135400_v2.0.a1
pyrus_communis	pycom06g11540 pycom14g11690
rosa_chinensis	RchiOBHm_Chr7g0187871
rosa_laevigata	RLG00000004751
rosa_multiflora	Rmu_ssc0000122.1_g000021
rosa_roxburghii	Rroxscaffold_3G00266990
rosa_rugosa	Rorug06G0484900
rosa_samantha	Rh7AG090100 Rh7BG091700 Rh7CG090800 Rh7DG092500
rosa_wichuraiana	Rw7G007780

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	720
AatII	GACGTC	1 cut(s)	1847
AccI	GTMKAC	2 cut(s)	366, 765
AccII	CGCG	1 cut(s)	43
AciI	CCGC	3 cut(s)	41, 121, 1198
AclWI	GGATC	4 cut(s)	245, 623, 736, 1958
AcsI	RAATTY	2 cut(s)	1219, 1257
AcuI	CTGAAG	6 cut(s)	363, 396, 1044, 1718, 1791, 1927
AcyI	GRCGYC	1 cut(s)	1844
AfaI	GTAC	3 cut(s)	229, 280, 1338
AfiI	CCNNNNNNNGG	2 cut(s)	775, 1947
AflIII	ACRYGT	1 cut(s)	749
AgsI	TTSAA	5 cut(s)	145, 673, 1234, 1278, 1311
AhlI	ACTAGT	1 cut(s)	1550
AjnI	CCWGG	4 cut(s)	286, 373, 1469, 1558
AjuI	GAANNNNNNNTTGG	2 cut(s)	173, 205
AluBI	AGCT	9 cut(s)	234, 271, 434, 480, 682, 813, 980, 1022, 1028
AluI	AGCT	9 cut(s)	234, 271, 434, 480, 682, 813, 980, 1022, 1028
Alw21I	GWGCWC	3 cut(s)	214, 815, 982
Alw26I	GTCTC	1 cut(s)	398
AlwI	GGATC	4 cut(s)	245, 623, 736, 1958
AlwNI	CAGNNNCTG	2 cut(s)	92, 1571
AoxI	GGCC	6 cut(s)	205, 861, 1245, 1323, 1635, 1882
ApeKI	GCWGC	3 cut(s)	1830, 1862, 1865
ApoI	RAATTY	2 cut(s)	1219, 1257
ArsI	GACNNNNNNTTYG	2 cut(s)	1778, 1810
AspS9I	GGNCC	3 cut(s)	118, 569, 1194
AsuC2I	CCSGG	4 cut(s)	112, 591, 609, 1080
AsuHPI	GGTGA	5 cut(s)	657, 690, 1157, 1309, 1548
AsuII	TTCGAA	1 cut(s)	1223
AvaII	GGWCC	3 cut(s)	118, 569, 1194
BaeGI	GKGCMC	1 cut(s)	1520
BanII	GRGCYC	2 cut(s)	815, 982
BauI	CACGAG	1 cut(s)	981
BbsI	GAAGAC	2 cut(s)	191, 582
Bbv12I	GWGCWC	3 cut(s)	214, 815, 982
BbvI	GCAGC	3 cut(s)	1842, 1874, 1877
BccI	CCATC	4 cut(s)	134, 269, 737, 1443
BceAI	ACGGC	2 cut(s)	192, 1536
BcgI	CGANNNNNNTGC	2 cut(s)	233, 267
BciT130I	CCWGG	4 cut(s)	288, 375, 1471, 1560
BciVI	GTATCC	1 cut(s)	66
BclI	TGATCA	3 cut(s)	16, 874, 1188
BcnI	CCSGG	4 cut(s)	112, 591, 609, 1080
BcoDI	GTCTC	1 cut(s)	398
BcuI	ACTAGT	1 cut(s)	1550
BfaI	CTAG	6 cut(s)	683, 1056, 1179, 1527, 1551, 1623
BfmI	CTRYAG	2 cut(s)	199, 1249
BfuI	GTATCC	1 cut(s)	66
BisI	GCNGC	3 cut(s)	1831, 1863, 1866
BlsI	GCNGC	3 cut(s)	1832, 1864, 1867
Bme1390I	CCNGG	8 cut(s)	112, 288, 375, 591, 609, 1080, 1471, 1560
Bme18I	GGWCC	3 cut(s)	118, 569, 1194
BmgT120I	GGNCC	3 cut(s)	118, 569, 1194
BmiI	GGNNCC	2 cut(s)	1196, 1524
BmrFI	CCNGG	8 cut(s)	112, 288, 375, 591, 609, 1080, 1471, 1560
BmsI	GCATC	5 cut(s)	79, 1043, 1496, 1696, 1877
BpiI	GAAGAC	2 cut(s)	191, 582
BpmI	CTGGAG	2 cut(s)	1014, 1464
Bpu14I	TTCGAA	1 cut(s)	1223
BpuEI	CTTGAG	2 cut(s)	725, 1191
BpuMI	CCSGG	4 cut(s)	112, 591, 609, 1080
Bsa29I	ATCGAT	1 cut(s)	1037
BsaAI	YACGTR	1 cut(s)	691
BsaBI	GATNNNNATC	1 cut(s)	1434
BsaHI	GRCGYC	1 cut(s)	1844
BsaJI	CCNNGG	5 cut(s)	216, 1320, 1559, 1857, 1917
BsaXI	ACNNNNNCTCC	4 cut(s)	379, 409, 1670, 1700
Bsc4I	CCNNNNNNNGG	2 cut(s)	775, 1947
Bse1I	ACTGG	4 cut(s)	104, 831, 1404, 1456
Bse8I	GATNNNNATC	1 cut(s)	1434
BseBI	CCWGG	4 cut(s)	288, 375, 1471, 1560
BseCI	ATCGAT	1 cut(s)	1037
BseDI	CCNNGG	5 cut(s)	216, 1320, 1559, 1857, 1917
BseGI	GGATG	8 cut(s)	19, 183, 280, 748, 766, 1126, 1690, 1711
BseJI	GATNNNNATC	1 cut(s)	1434
BseLI	CCNNNNNNNGG	2 cut(s)	775, 1947
BseMII	CTCAG	2 cut(s)	1509, 1526
BseNI	ACTGG	4 cut(s)	104, 831, 1404, 1456
BseRI	GAGGAG	1 cut(s)	347
BseSI	GKGCMC	1 cut(s)	1520
BseXI	GCAGC	3 cut(s)	1842, 1874, 1877
Bsh1236I	CGCG	1 cut(s)	43
Bsh1285I	CGRYCG	1 cut(s)	111
BshFI	GGCC	6 cut(s)	207, 863, 1247, 1325, 1637, 1884
BshVI	ATCGAT	1 cut(s)	1037
BsiEI	CGRYCG	1 cut(s)	111
BsiHKAI	GWGCWC	3 cut(s)	214, 815, 982
BsiSI	CCGG	4 cut(s)	111, 590, 608, 1080
BslFI	GGGAC	5 cut(s)	118, 240, 606, 1180, 1855
BslI	CCNNNNNNNGG	2 cut(s)	775, 1947
BsmAI	GTCTC	1 cut(s)	398
BsmFI	GGGAC	5 cut(s)	118, 240, 606, 1180, 1855
BsmI	GAATGC	2 cut(s)	928, 1306
BsnI	GGCC	6 cut(s)	207, 863, 1247, 1325, 1637, 1884
Bsp119I	TTCGAA	1 cut(s)	1223
Bsp1286I	GDGCHC	4 cut(s)	214, 815, 982, 1520
Bsp1407I	TGTACA	1 cut(s)	1336
Bsp143I	GATC	8 cut(s)	16, 237, 628, 728, 874, 1188, 1788, 1950
BspACI	CCGC	3 cut(s)	41, 121, 1198
BspANI	GGCC	6 cut(s)	207, 863, 1247, 1325, 1637, 1884
BspCNI	CTCAG	2 cut(s)	1508, 1525
BspDI	ATCGAT	1 cut(s)	1037
BspFNI	CGCG	1 cut(s)	43
BspHI	TCATGA	1 cut(s)	1185
BspLI	GGNNCC	2 cut(s)	1196, 1524
BspMAI	CTGCAG	1 cut(s)	1253
BspPI	GGATC	4 cut(s)	245, 623, 736, 1958
BspT104I	TTCGAA	1 cut(s)	1223
BsrGI	TGTACA	1 cut(s)	1336
BsrI	ACTGG	4 cut(s)	104, 831, 1404, 1456
BssECI	CCNNGG	5 cut(s)	216, 1320, 1559, 1857, 1917
BssMI	GATC	8 cut(s)	16, 237, 628, 728, 874, 1188, 1788, 1950
BssNAI	GTATAC	1 cut(s)	766
BssNI	GRCGYC	1 cut(s)	1844
BssSI	CACGAG	1 cut(s)	981
BssT1I	CCWWGG	3 cut(s)	216, 1857, 1917
Bst1107I	GTATAC	1 cut(s)	766
Bst2BI	CACGAG	1 cut(s)	981
Bst2UI	CCWGG	4 cut(s)	288, 375, 1471, 1560
Bst4CI	ACNGT	7 cut(s)	141, 294, 491, 523, 539, 804, 1336
BstACI	GRCGYC	1 cut(s)	1844
BstAUI	TGTACA	1 cut(s)	1336
BstBAI	YACGTR	1 cut(s)	691
BstBI	TTCGAA	1 cut(s)	1223
BstC8I	GCNNGC	8 cut(s)	41, 94, 224, 894, 1202, 1249, 1639, 1711
BstDEI	CTNAG	2 cut(s)	1495, 1512
BstENI	CCTNNNNNAGG	1 cut(s)	773
BstF5I	GGATG	8 cut(s)	19, 183, 280, 748, 766, 1126, 1690, 1711
BstFNI	CGCG	1 cut(s)	43
BstKTI	GATC	8 cut(s)	19, 240, 631, 731, 877, 1191, 1791, 1953
BstMAI	GTCTC	1 cut(s)	398
BstMBI	GATC	8 cut(s)	16, 237, 628, 728, 874, 1188, 1788, 1950
BstMCI	CGRYCG	1 cut(s)	111
BstMWI	GCNNNNNNNGC	3 cut(s)	89, 1100, 1643
BstNI	CCWGG	4 cut(s)	288, 375, 1471, 1560
BstNSI	RCATGY	1 cut(s)	753
BstSCI	CCNGG	8 cut(s)	110, 286, 373, 589, 607, 1078, 1469, 1558
BstSFI	CTRYAG	2 cut(s)	199, 1249
BstSLI	GKGCMC	1 cut(s)	1520
BstUI	CGCG	1 cut(s)	43
BstV1I	GCAGC	3 cut(s)	1842, 1874, 1877
BstV2I	GAAGAC	2 cut(s)	191, 582
BstX2I	RGATCY	1 cut(s)	1950
BstXI	CCANNNNNNTGG	1 cut(s)	1442
BstYI	RGATCY	1 cut(s)	1950
BstZ17I	GTATAC	1 cut(s)	766
Bsu15I	ATCGAT	1 cut(s)	1037
BsuI	GTATCC	1 cut(s)	66
BsuRI	GGCC	6 cut(s)	207, 863, 1247, 1325, 1637, 1884
BsuTUI	ATCGAT	1 cut(s)	1037
BtgZI	GCGATG	1 cut(s)	1559
BtsCI	GGATG	8 cut(s)	19, 183, 280, 748, 766, 1126, 1690, 1711
BtsI	GCAGTG	1 cut(s)	1165
BtsIMutI	CAGTG	7 cut(s)	299, 862, 1165, 1742, 1767, 1854, 1951
Cac8I	GCNNGC	8 cut(s)	41, 94, 224, 894, 1202, 1249, 1639, 1711
CaiI	CAGNNNCTG	2 cut(s)	92, 1571
CciI	TCATGA	1 cut(s)	1185
Cfr13I	GGNCC	3 cut(s)	118, 569, 1194
ClaI	ATCGAT	1 cut(s)	1037
Csp6I	GTAC	3 cut(s)	228, 279, 1337
CviQI	GTAC	3 cut(s)	228, 279, 1337
DdeI	CTNAG	2 cut(s)	1495, 1512
DpnI	GATC	8 cut(s)	18, 239, 630, 730, 876, 1190, 1790, 1952
DpnII	GATC	8 cut(s)	16, 237, 628, 728, 874, 1188, 1788, 1950
Ecl136II	GAGCTC	2 cut(s)	813, 980
Eco130I	CCWWGG	3 cut(s)	216, 1857, 1917
Eco147I	AGGCCT	3 cut(s)	863, 1247, 1637
Eco24I	GRGCYC	2 cut(s)	815, 982
Eco32I	GATATC	1 cut(s)	1959
Eco47I	GGWCC	3 cut(s)	118, 569, 1194
Eco53kI	GAGCTC	2 cut(s)	813, 980
Eco57I	CTGAAG	6 cut(s)	363, 396, 1044, 1718, 1791, 1927
EcoICRI	GAGCTC	2 cut(s)	813, 980
EcoNI	CCTNNNNNAGG	1 cut(s)	773
EcoO109I	RGGNCCY	1 cut(s)	1194
EcoRI	GAATTC	1 cut(s)	1257
EcoRII	CCWGG	4 cut(s)	286, 373, 1469, 1558
EcoRV	GATATC	1 cut(s)	1959
EcoT14I	CCWWGG	3 cut(s)	216, 1857, 1917
EcoT22I	ATGCAT	1 cut(s)	246
EcoT38I	GRGCYC	2 cut(s)	815, 982
ErhI	CCWWGG	3 cut(s)	216, 1857, 1917
FaqI	GGGAC	5 cut(s)	118, 240, 606, 1180, 1855
FauI	CCCGC	2 cut(s)	48, 1205
FauNDI	CATATG	1 cut(s)	1090
FbaI	TGATCA	3 cut(s)	16, 874, 1188
FblI	GTMKAC	2 cut(s)	366, 765
Fnu4HI	GCNGC	3 cut(s)	1831, 1863, 1866
FokI	GGATG	8 cut(s)	26, 190, 287, 755, 773, 1133, 1677, 1718
FriOI	GRGCYC	2 cut(s)	815, 982
Fsp4HI	GCNGC	3 cut(s)	1831, 1863, 1866
FspBI	CTAG	6 cut(s)	683, 1056, 1179, 1527, 1551, 1623
GluI	GCNGC	3 cut(s)	1831, 1863, 1866
GsuI	CTGGAG	2 cut(s)	1014, 1464
HaeIII	GGCC	6 cut(s)	207, 863, 1247, 1325, 1637, 1884
HapII	CCGG	4 cut(s)	111, 590, 608, 1080
Hin1I	GRCGYC	1 cut(s)	1844
HpaII	CCGG	4 cut(s)	111, 590, 608, 1080
HphI	GGTGA	5 cut(s)	657, 690, 1157, 1309, 1548
Hpy166II	GTNNAC	5 cut(s)	367, 698, 755, 766, 1556
Hpy8I	GTNNAC	5 cut(s)	367, 698, 755, 766, 1556
HpyAV	CCTTC	6 cut(s)	97, 109, 259, 461, 1295, 1951
HpyCH4III	ACNGT	7 cut(s)	141, 294, 491, 523, 539, 804, 1336
HpyCH4IV	ACGT	3 cut(s)	188, 690, 1844
HpyCH4V	TGCA	7 cut(s)	244, 654, 677, 892, 1251, 1379, 1724
HpyF10VI	GCNNNNNNNGC	3 cut(s)	89, 1100, 1643
HpyF3I	CTNAG	2 cut(s)	1495, 1512
HpySE526I	ACGT	3 cut(s)	188, 690, 1844
Hsp92I	GRCGYC	1 cut(s)	1844
Ksp22I	TGATCA	3 cut(s)	16, 874, 1188
Kzo9I	GATC	8 cut(s)	16, 237, 628, 728, 874, 1188, 1788, 1950
LmnI	GCTCC	6 cut(s)	217, 268, 289, 818, 1033, 1528
Lsp1109I	GCAGC	3 cut(s)	1842, 1874, 1877
LweI	GCATC	5 cut(s)	79, 1043, 1496, 1696, 1877
MaeI	CTAG	6 cut(s)	683, 1056, 1179, 1527, 1551, 1623
MaeII	ACGT	3 cut(s)	188, 690, 1844
MaeIII	GTNAC	6 cut(s)	44, 935, 1082, 1160, 1399, 1507
MalI	GATC	8 cut(s)	18, 239, 630, 730, 876, 1190, 1790, 1952
MboI	GATC	8 cut(s)	16, 237, 628, 728, 874, 1188, 1788, 1950
MfeI	CAATTG	1 cut(s)	1132
MflI	RGATCY	1 cut(s)	1950
MhlI	GDGCHC	4 cut(s)	214, 815, 982, 1520
MluCI	AATT	9 cut(s)	715, 1001, 1114, 1132, 1219, 1257, 1311, 1719, 1816
MlyI	GAGTC	2 cut(s)	818, 1354
MmeI	TCCRAC	1 cut(s)	1683
Mph1103I	ATGCAT	1 cut(s)	246
MslI	CAYNNNNRTG	2 cut(s)	950, 1158
MspA1I	CMGCKG	1 cut(s)	234
MspI	CCGG	4 cut(s)	111, 590, 608, 1080
MspR9I	CCNGG	8 cut(s)	112, 288, 375, 591, 609, 1080, 1471, 1560
MunI	CAATTG	1 cut(s)	1132
Mva1269I	GAATGC	2 cut(s)	928, 1306
MvaI	CCWGG	4 cut(s)	288, 375, 1471, 1560
MvnI	CGCG	1 cut(s)	43
MwoI	GCNNNNNNNGC	3 cut(s)	89, 1100, 1643
NciI	CCSGG	4 cut(s)	112, 591, 609, 1080
NdeI	CATATG	1 cut(s)	1090
NdeII	GATC	8 cut(s)	16, 237, 628, 728, 874, 1188, 1788, 1950
NlaIV	GGNNCC	2 cut(s)	1196, 1524
NmuCI	GTSAC	3 cut(s)	44, 1160, 1399
NsiI	ATGCAT	1 cut(s)	246
NspI	RCATGY	1 cut(s)	753
NspV	TTCGAA	1 cut(s)	1223
PagI	TCATGA	1 cut(s)	1185
PceI	AGGCCT	3 cut(s)	863, 1247, 1637
PciI	ACATGT	1 cut(s)	749
PctI	GAATGC	2 cut(s)	928, 1306
PfoI	TCCNGGA	2 cut(s)	286, 589
PkrI	GCNGC	3 cut(s)	1832, 1864, 1867
PleI	GAGTC	2 cut(s)	818, 1353
PpsI	GAGTC	2 cut(s)	818, 1353
Ppu21I	YACGTR	1 cut(s)	691
PpuMI	RGGWCCY	1 cut(s)	1194
PscI	ACATGT	1 cut(s)	749
PsiI	TTATAA	1 cut(s)	720
Psp124BI	GAGCTC	2 cut(s)	815, 982
Psp5II	RGGWCCY	1 cut(s)	1194
Psp6I	CCWGG	4 cut(s)	286, 373, 1469, 1558
PspGI	CCWGG	4 cut(s)	286, 373, 1469, 1558
PspN4I	GGNNCC	2 cut(s)	1196, 1524
PspPI	GGNCC	3 cut(s)	118, 569, 1194
PspPPI	RGGWCCY	1 cut(s)	1194
PstI	CTGCAG	1 cut(s)	1253
PstNI	CAGNNNCTG	2 cut(s)	92, 1571
PsuI	RGATCY	1 cut(s)	1950
PvuII	CAGCTG	1 cut(s)	234
RsaI	GTAC	3 cut(s)	229, 280, 1338
RsaNI	GTAC	3 cut(s)	228, 279, 1337
RseI	CAYNNNNRTG	2 cut(s)	950, 1158
SacI	GAGCTC	2 cut(s)	815, 982
SatI	GCNGC	3 cut(s)	1831, 1863, 1866
Sau3AI	GATC	8 cut(s)	16, 237, 628, 728, 874, 1188, 1788, 1950
Sau96I	GGNCC	3 cut(s)	118, 569, 1194
SchI	GAGTC	2 cut(s)	818, 1354
ScrFI	CCNGG	8 cut(s)	112, 288, 375, 591, 609, 1080, 1471, 1560
SduI	GDGCHC	4 cut(s)	214, 815, 982, 1520
SfaNI	GCATC	5 cut(s)	79, 1043, 1496, 1696, 1877
SfcI	CTRYAG	2 cut(s)	199, 1249
SfuI	TTCGAA	1 cut(s)	1223
SinI	GGWCC	3 cut(s)	118, 569, 1194
SmiMI	CAYNNNNRTG	2 cut(s)	950, 1158
SmlI	CTYRAG	2 cut(s)	704, 1206
SmoI	CTYRAG	2 cut(s)	704, 1206
SpeI	ACTAGT	1 cut(s)	1550
Sse9I	AATT	9 cut(s)	715, 1001, 1114, 1132, 1219, 1257, 1311, 1719, 1816
SseBI	AGGCCT	3 cut(s)	863, 1247, 1637
SsiI	CCGC	3 cut(s)	41, 121, 1198
SspMI	CTAG	6 cut(s)	683, 1056, 1179, 1527, 1551, 1623
SstI	GAGCTC	2 cut(s)	815, 982
StuI	AGGCCT	3 cut(s)	863, 1247, 1637
StyD4I	CCNGG	8 cut(s)	110, 286, 373, 589, 607, 1078, 1469, 1558
StyI	CCWWGG	3 cut(s)	216, 1857, 1917
TaaI	ACNGT	7 cut(s)	141, 294, 491, 523, 539, 804, 1336
TaiI	ACGT	3 cut(s)	191, 693, 1847
TaqI	TCGA	5 cut(s)	476, 783, 1037, 1109, 1223
TaqII	GACCGA	1 cut(s)	971
TasI	AATT	9 cut(s)	715, 1001, 1114, 1132, 1219, 1257, 1311, 1719, 1816
TatI	WGTACW	1 cut(s)	1336
TscAI	CASTG	7 cut(s)	299, 862, 1165, 1749, 1774, 1854, 1951
TseFI	GTSAC	3 cut(s)	44, 1160, 1399
TseI	GCWGC	3 cut(s)	1830, 1862, 1865
Tsp45I	GTSAC	3 cut(s)	44, 1160, 1399
TspRI	CASTG	7 cut(s)	299, 862, 1165, 1749, 1774, 1854, 1951
VpaK11BI	GGWCC	3 cut(s)	118, 569, 1194
XagI	CCTNNNNNAGG	1 cut(s)	773
XapI	RAATTY	2 cut(s)	1219, 1257
XceI	RCATGY	1 cut(s)	753
XmiI	GTMKAC	2 cut(s)	366, 765
XspI	CTAG	6 cut(s)	683, 1056, 1179, 1527, 1551, 1623
ZraI	GACGTC	1 cut(s)	1845
Zsp2I	ATGCAT	1 cut(s)	246

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.