Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb5

Orthogroup ID

OG0002240

Physical Location & Seq

Genomic Coordinates Forward (+)

6012260 .. 6016413

Gene Structure 4154 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_5g10580.t3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1755 bp

ATGGCAACTGTGACAACGTCAAACTTTGTACCAGGCACTTCACATGTGAATGGAGCTTCAGGATCAGAAGCCAGAACAAAATTGGGACAGATGGGTCTGTGGAACCAATCAATGACTCACAATGGGTTAAAATCTTTGAGCAACTTGGATATGCTTCGAATCCGAACCCGTCCCAATGCATTTTCTATGCAAGTCATGAGAAAAGCTGCCAGTGATATTGGATCTGAGGGGAGGATTGTCTGTGGTCATGGAATGAACTTGGTATTTGTTGGAGCTGAAGTTGGTCCATGGAGCAAAACCGGTGGTCTTGGTGATGTTCTTGGAGGTCTCCCACCAGCTATGGCGGCTAATGGCCACCGTGTTATGACGGTGTCTCCTCGCTATGATCAATACAAAGATGCATGGGACACCAATGTACTAGTTGAGATAGAAATTGGTGGCAGAGTTGAACCTGTCCGATTCTTCCACTGCTACAAACGCGGGGTTGATCGTGTATTTGTCGATCATCCATGGTTCCTTGAGAAGGTATGGGGTAAAACAGGATCCAAGATCTATGGTCCTAAGGCAGGAACGGATTACAAGGACAACCAACTACGCTTCATCTTGTTGTGCCAGGCTGCGCTGGAGGCACCGAGGGTTCTCAATTTGAACAGCAACGAATACTTCTCTGGACCTTATGGAGAAGATGTTGTATTCATTTGCAATGATTGGCACACTGCTCTTCTTCCTTGCTTCTTAAAAACCATCTACAAACCAATGGGGATTTACACAAGTGCCAAGGTTGCATTTTGCATCCACAATATAGCTTACCAGGGGAGATTTGGTATGGAGGACTTTGAACTCCTTGATTTACCTGACCAACTTAAGGGTTCTTTCGACTTCATTGATGGGTATAACAAGCCTGTTAAGGGAAGAAAAATCAACTGGATGAAAGCTGGAATATTGGAATCGGACAGGGTAGTTACTGTTAGCCCTTACTATGCCCAGGAACTTATTTCTGGAGAAGACAAAGGTGTGGAATTAGATAACATTATTCGTAAGACTGGAATCACTGGAATTGTGAATGGCATGGATGTTCAAGAGTGGAATCCAGCCACAGACAAACACTTACATGTCAACTATGATGAAACAACTGTACTGGATGCAAAGCCACTTTTGAAGGAGGCCCTTCAAGCCGAAGTTGGGCTTCCAGTTGACAAGGACATCCCATTGATAGGATTCATCGGTAGGCTAGAGGAGCAGAAAGGTTCGGATATTCTAGTGGAAGCCATTCCAGAACTAGCTGGAGAGAATTTGCAAATAATAGTCCTTGGAACTGGCAAAAAGGACCTGGAGAAGCAGATCGAACAGCTAGAGACCAAATATCCGGGAACCGCTGTAGGTGTGGTGAAATTCAATGTTCCATTAGCCCACATGATTATTGGTGGTGCTGATTTCATGTTGATCCCAAGTAGATTTGAACCATGTGGACTCATTCAGTTGCATGCAATGAGATATGGAACAGTTCCTATTGTCGCTTCAACTGGTGGACTTGTCGACACTGTCAAGGAAGGTTTTACAGGATTTCAAATGGGAGGTTTCAATGTTGATTGCGACGAAGTTGATCCAGCAGATGTACTTGCAATATCTACTACAGTGAGGAGAGCTGTTACAAGCTGTGGTACCTCTGCCATGAAAGAAATGATCCAGAATTGCATGGCACAAGATCTTTCCTGGAAGGTTAATATGATACTGAGATGTTCCAGAAATCAATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0000271 GO:0003674 GO:0003824 GO:0004373 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005975 GO:0005976 GO:0005982 GO:0006073 GO:0008150 GO:0008152 GO:0008194 GO:0009011 GO:0009058 GO:0009059 GO:0009250 GO:0009501 GO:0009507 GO:0009536 GO:0009569 GO:0009987 GO:0016051 GO:0016740 GO:0016757 GO:0016758 GO:0017076 GO:0019252 GO:0019863 GO:0019865 GO:0030554 GO:0032553 GO:0032555 GO:0032559 GO:0033692 GO:0034637 GO:0034645 GO:0035251 GO:0036094 GO:0043036 GO:0043167 GO:0043168 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043531 GO:0044042 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0044877 GO:0046527 GO:0071704 GO:0097159 GO:0097367 GO:1901265 GO:1901363 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00500 ko01100 ko01110 map00500 map01100 map01110

Pfam Domains

Protein Families

Glyco_transf_5 Glycos_transf_1

Protein Analysis

585

Amino Acids

64.27

Weight (kDa)

5.91

Isoelectric Point (pI)

23.81

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_transf_5	PF08323	87 - 347	3.7e-65	Starch synthase catalytic domain
GT4-conflict	PF20706	369 - 574	2.3e-09	Family 4 Glycosyltransferase in conflict systems
Glycos_transf_1	PF00534	398 - 522	1.1e-16	Glycosyl transferases group 1
Glyco_trans_1_4	PF13692	403 - 523	3.1e-15	Glycosyl transferases group 1

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002240)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G32900
fragaria_vesca	FvH4_5g10580 FvH4_5g10580 FvH4_5g10580 FvH4_5g10580 FvH4_5g10580 FvH4_5g10580 FvH4_7g17630 FvH4_7g17630 FvH4_7g17630 FvH4_7g17630
malus_domestica	MD06G1122100.v1.1 MD07G1159300.v1.1 MD14G1138500.v1.1
prunus_persica	Prupe.2G197400_v2.0.a1 Prupe.2G197400_v2.0.a1 Prupe.2G197400_v2.0.a1 Prupe.5G132800_v2.0.a1 Prupe.5G132800_v2.0.a1
pyrus_communis	pycom01g11240 pycom06g11320 pycom07g15590 pycom14g11360
rosa_chinensis	RchiOBHm_Chr1g0361061 RchiOBHm_Chr7g0187571
rosa_laevigata	RLG00000004770 RLG00000027751
rosa_multiflora	Rmu_co8027448.1_g000001 Rmu_sc0000677.1_g000001 Rmu_ssc0000110.1_g000020
rosa_roxburghii	Rroxscaffold_3G00267310 Rroxscaffold_4G00295460
rosa_rugosa	Rorug01G0285200 Rorug06G0482700
rosa_samantha	Rh1AG296600 Rh1BG260900 Rh1CG278200 Rh1DG290900 Rh7AG087600 Rh7BG088900 Rh7CG088100 Rh7DG089800
rosa_wichuraiana	Rw1G026200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	93
Acc65I	GGTACC	1 cut(s)	1661
AccB1I	GGYRCC	2 cut(s)	628, 1661
AccI	GTMKAC	1 cut(s)	1536
AccII	CGCG	1 cut(s)	480
AciI	CCGC	3 cut(s)	344, 480, 1374
AclWI	GGATC	7 cut(s)	70, 229, 537, 550, 1438, 1598, 1678
AcoI	YGGCCR	1 cut(s)	352
AcsI	RAATTY	2 cut(s)	1291, 1391
AcuI	CTGAAG	2 cut(s)	42, 297
AfaI	GTAC	5 cut(s)	30, 417, 1137, 1617, 1663
AfiI	CCNNNNNNNGG	6 cut(s)	523, 566, 865, 908, 1182, 1214
AflII	CTTAAG	1 cut(s)	863
AflIII	ACRYGT	2 cut(s)	43, 1111
AgeI	ACCGGT	1 cut(s)	299
AhlI	ACTAGT	1 cut(s)	418
AjnI	CCWGG	6 cut(s)	31, 612, 810, 984, 1329, 1712
Alw26I	GTCTC	3 cut(s)	332, 378, 1349
AlwI	GGATC	7 cut(s)	70, 229, 537, 550, 1438, 1598, 1678
AoxI	GGCC	2 cut(s)	352, 1164
ApeKI	GCWGC	2 cut(s)	206, 617
ApoI	RAATTY	2 cut(s)	1291, 1391
AsiGI	ACCGGT	1 cut(s)	299
Asp700I	GAANNNNTTC	1 cut(s)	1269
Asp718I	GGTACC	1 cut(s)	1661
AspLEI	GCGC	1 cut(s)	622
AspS9I	GGNCC	5 cut(s)	284, 557, 671, 1165, 1327
AsuC2I	CCSGG	1 cut(s)	1368
AsuHPI	GGTGA	2 cut(s)	323, 1399
AsuII	TTCGAA	1 cut(s)	157
AvaII	GGWCC	4 cut(s)	284, 557, 671, 1327
AxyI	CCTNAGG	1 cut(s)	561
BalI	TGGCCA	1 cut(s)	354
BamHI	GGATCC	1 cut(s)	542
BanI	GGYRCC	2 cut(s)	628, 1661
BbsI	GAAGAC	1 cut(s)	1011
BbvI	GCAGC	2 cut(s)	193, 604
BccI	CCATC	3 cut(s)	85, 752, 881
BciT130I	CCWGG	6 cut(s)	33, 614, 812, 986, 1331, 1714
BclI	TGATCA	1 cut(s)	385
BcnI	CCSGG	1 cut(s)	1368
BcoDI	GTCTC	3 cut(s)	332, 378, 1349
BcuI	ACTAGT	1 cut(s)	418
BfaI	CTAG	5 cut(s)	419, 1232, 1259, 1280, 1352
BfmI	CTRYAG	2 cut(s)	1377, 1632
BfrI	CTTAAG	1 cut(s)	863
BglII	AGATCT	2 cut(s)	549, 1705
BisI	GCNGC	3 cut(s)	207, 345, 618
BlsI	GCNGC	3 cut(s)	208, 346, 619
Bme1390I	CCNGG	7 cut(s)	33, 614, 812, 986, 1331, 1368, 1714
Bme18I	GGWCC	4 cut(s)	284, 557, 671, 1327
BmgT120I	GGNCC	5 cut(s)	284, 557, 671, 1165, 1327
BmiI	GGNNCC	6 cut(s)	104, 515, 544, 630, 1372, 1663
BmrFI	CCNGG	7 cut(s)	33, 614, 812, 986, 1331, 1368, 1714
BmsI	GCATC	3 cut(s)	388, 801, 1132
BpiI	GAAGAC	1 cut(s)	1011
BpmI	CTGGAG	4 cut(s)	644, 1020, 1305, 1352
Bpu14I	TTCGAA	1 cut(s)	157
BpuEI	CTTGAG	1 cut(s)	539
BpuMI	CCSGG	1 cut(s)	1368
BsaI	GGTCTC	2 cut(s)	332, 1349
BsaJI	CCNNGG	7 cut(s)	287, 509, 632, 777, 811, 984, 1309
BsaWI	WCCGGW	1 cut(s)	299
BsaXI	ACNNNNNCTCC	8 cut(s)	264, 294, 358, 388, 672, 702, 808, 838
Bsc4I	CCNNNNNNNGG	6 cut(s)	523, 566, 865, 908, 1182, 1214
Bse118I	RCCGGY	1 cut(s)	299
Bse1I	ACTGG	8 cut(s)	210, 929, 1048, 1057, 1143, 1190, 1321, 1528
Bse21I	CCTNAGG	1 cut(s)	561
Bse3DI	GCAATG	2 cut(s)	709, 1494
BseBI	CCWGG	6 cut(s)	33, 614, 812, 986, 1331, 1714
BseDI	CCNNGG	7 cut(s)	287, 509, 632, 777, 811, 984, 1309
BseGI	GGATG	6 cut(s)	505, 792, 933, 1078, 1147, 1203
BseLI	CCNNNNNNNGG	6 cut(s)	523, 566, 865, 908, 1182, 1214
BseMI	GCAATG	2 cut(s)	709, 1494
BseMII	CTCAG	2 cut(s)	216, 1724
BseNI	ACTGG	8 cut(s)	210, 929, 1048, 1057, 1143, 1190, 1321, 1528
BseRI	GAGGAG	3 cut(s)	366, 1250, 1654
BseXI	GCAGC	2 cut(s)	193, 604
Bsh1236I	CGCG	1 cut(s)	480
BshFI	GGCC	2 cut(s)	354, 1166
BshNI	GGYRCC	2 cut(s)	628, 1661
BshTI	ACCGGT	1 cut(s)	299
BsiSI	CCGG	2 cut(s)	300, 1367
BslFI	GGGAC	3 cut(s)	99, 156, 419
BslI	CCNNNNNNNGG	6 cut(s)	523, 566, 865, 908, 1182, 1214
BsmAI	GTCTC	3 cut(s)	332, 378, 1349
BsmFI	GGGAC	3 cut(s)	99, 156, 419
BsnI	GGCC	2 cut(s)	354, 1166
Bso31I	GGTCTC	2 cut(s)	332, 1349
Bsp119I	TTCGAA	1 cut(s)	157
Bsp19I	CCATGG	2 cut(s)	287, 509
BspACI	CCGC	3 cut(s)	344, 480, 1374
BspANI	GGCC	2 cut(s)	354, 1166
BspCNI	CTCAG	2 cut(s)	217, 1725
BspFNI	CGCG	1 cut(s)	480
BspHI	TCATGA	1 cut(s)	195
BspLI	GGNNCC	6 cut(s)	104, 515, 544, 630, 1372, 1663
BspPI	GGATC	7 cut(s)	70, 229, 537, 550, 1438, 1598, 1678
BspQI	GCTCTTC	1 cut(s)	726
BspT104I	TTCGAA	1 cut(s)	157
BspT107I	GGYRCC	2 cut(s)	628, 1661
BspTI	CTTAAG	1 cut(s)	863
BspTNI	GGTCTC	2 cut(s)	332, 1349
BsrDI	GCAATG	2 cut(s)	709, 1494
BsrFI	RCCGGY	1 cut(s)	299
BsrI	ACTGG	8 cut(s)	210, 929, 1048, 1057, 1143, 1190, 1321, 1528
BssAI	RCCGGY	1 cut(s)	299
BssECI	CCNNGG	7 cut(s)	287, 509, 632, 777, 811, 984, 1309
BssT1I	CCWWGG	4 cut(s)	287, 509, 777, 1309
Bst2UI	CCWGG	6 cut(s)	33, 614, 812, 986, 1331, 1714
Bst4CI	ACNGT	8 cut(s)	10, 359, 370, 967, 1135, 1504, 1543, 1636
Bst6I	CTCTTC	1 cut(s)	726
BstAFI	CTTAAG	1 cut(s)	863
BstBI	TTCGAA	1 cut(s)	157
BstC8I	GCNNGC	1 cut(s)	1485
BstDEI	CTNAG	3 cut(s)	225, 561, 1733
BstDSI	CCRYGG	2 cut(s)	287, 509
BstENI	CCTNNNNNAGG	2 cut(s)	521, 564
BstF5I	GGATG	6 cut(s)	505, 792, 933, 1078, 1147, 1203
BstFNI	CGCG	1 cut(s)	480
BstHHI	GCGC	1 cut(s)	622
BstMAI	GTCTC	3 cut(s)	332, 378, 1349
BstMWI	GCNNNNNNNGC	6 cut(s)	344, 477, 626, 782, 1172, 1237
BstNI	CCWGG	6 cut(s)	33, 614, 812, 986, 1331, 1714
BstNSI	RCATGY	3 cut(s)	47, 1115, 1487
BstSCI	CCNGG	7 cut(s)	31, 612, 810, 984, 1329, 1366, 1712
BstSFI	CTRYAG	2 cut(s)	1377, 1632
BstUI	CGCG	1 cut(s)	480
BstV1I	GCAGC	2 cut(s)	193, 604
BstV2I	GAAGAC	1 cut(s)	1011
BstX2I	RGATCY	4 cut(s)	221, 542, 549, 1705
BstYI	RGATCY	4 cut(s)	221, 542, 549, 1705
Bsu36I	CCTNAGG	1 cut(s)	561
BsuRI	GGCC	2 cut(s)	354, 1166
BtgI	CCRYGG	2 cut(s)	287, 509
BtsCI	GGATG	6 cut(s)	505, 792, 933, 1078, 1147, 1203
BtsI	GCAGTG	2 cut(s)	466, 714
BtsIMutI	CAGTG	6 cut(s)	217, 466, 714, 1050, 1539, 1641
Cac8I	GCNNGC	1 cut(s)	1485
CciI	TCATGA	1 cut(s)	195
CfoI	GCGC	1 cut(s)	622
Cfr10I	RCCGGY	1 cut(s)	299
Cfr13I	GGNCC	5 cut(s)	284, 557, 671, 1165, 1327
Csp6I	GTAC	5 cut(s)	29, 416, 1136, 1616, 1662
CspAI	ACCGGT	1 cut(s)	299
CspCI	CAANNNNNGTGG	2 cut(s)	283, 318
CviQI	GTAC	5 cut(s)	29, 416, 1136, 1616, 1662
DdeI	CTNAG	3 cut(s)	225, 561, 1733
DrdI	GACNNNNNNGTC	1 cut(s)	93
DseDI	GACNNNNNNGTC	1 cut(s)	93
EaeI	YGGCCR	1 cut(s)	352
Eam1104I	CTCTTC	1 cut(s)	726
EarI	CTCTTC	1 cut(s)	726
Eco130I	CCWWGG	4 cut(s)	287, 509, 777, 1309
Eco31I	GGTCTC	2 cut(s)	332, 1349
Eco47I	GGWCC	4 cut(s)	284, 557, 671, 1327
Eco57I	CTGAAG	2 cut(s)	42, 297
Eco81I	CCTNAGG	1 cut(s)	561
EcoNI	CCTNNNNNAGG	2 cut(s)	521, 564
EcoO109I	RGGNCCY	2 cut(s)	1165, 1327
EcoRII	CCWGG	6 cut(s)	31, 612, 810, 984, 1329, 1712
EcoT14I	CCWWGG	4 cut(s)	287, 509, 777, 1309
EcoT22I	ATGCAT	2 cut(s)	181, 403
ErhI	CCWWGG	4 cut(s)	287, 509, 777, 1309
FalI	AAGNNNNNCTT	2 cut(s)	1170, 1202
FaqI	GGGAC	3 cut(s)	99, 156, 419
FauI	CCCGC	1 cut(s)	473
FbaI	TGATCA	1 cut(s)	385
FblI	GTMKAC	1 cut(s)	1536
Fnu4HI	GCNGC	3 cut(s)	207, 345, 618
FokI	GGATG	6 cut(s)	492, 779, 940, 1085, 1154, 1190
Fsp4HI	GCNGC	3 cut(s)	207, 345, 618
FspBI	CTAG	5 cut(s)	419, 1232, 1259, 1280, 1352
GlaI	GCGC	1 cut(s)	621
GluI	GCNGC	3 cut(s)	207, 345, 618
GsuI	CTGGAG	4 cut(s)	644, 1020, 1305, 1352
HaeIII	GGCC	2 cut(s)	354, 1166
HapII	CCGG	2 cut(s)	300, 1367
HhaI	GCGC	1 cut(s)	622
Hin6I	GCGC	1 cut(s)	620
HinP1I	GCGC	1 cut(s)	620
HincII	GTYRAC	3 cut(s)	1117, 1195, 1537
HindII	GTYRAC	3 cut(s)	1117, 1195, 1537
HinfI	GANTC	8 cut(s)	115, 159, 459, 947, 1047, 1087, 1218, 1470
HpaII	CCGG	2 cut(s)	300, 1367
HphI	GGTGA	2 cut(s)	323, 1399
Hpy166II	GTNNAC	5 cut(s)	1117, 1195, 1469, 1529, 1537
Hpy188I	TCNGA	6 cut(s)	67, 164, 226, 458, 952, 1252
Hpy188III	TCNNGA	8 cut(s)	60, 196, 669, 999, 1079, 1274, 1687, 1743
Hpy8I	GTNNAC	5 cut(s)	1117, 1195, 1469, 1529, 1537
Hpy99I	CGWCG	1 cut(s)	1598
HpyAV	CCTTC	5 cut(s)	517, 1153, 1178, 1544, 1711
HpyCH4III	ACNGT	8 cut(s)	10, 359, 370, 967, 1135, 1504, 1543, 1636
HpyCH4IV	ACGT	1 cut(s)	17
HpyF10VI	GCNNNNNNNGC	6 cut(s)	344, 477, 626, 782, 1172, 1237
HpyF3I	CTNAG	3 cut(s)	225, 561, 1733
HpySE526I	ACGT	1 cut(s)	17
HspAI	GCGC	1 cut(s)	620
KpnI	GGTACC	1 cut(s)	1665
Ksp22I	TGATCA	1 cut(s)	385
LguI	GCTCTTC	1 cut(s)	726
LmnI	GCTCC	4 cut(s)	53, 272, 291, 1237
Lsp1109I	GCAGC	2 cut(s)	193, 604
LweI	GCATC	3 cut(s)	388, 801, 1132
MaeI	CTAG	5 cut(s)	419, 1232, 1259, 1280, 1352
MaeII	ACGT	1 cut(s)	17
MaeIII	GTNAC	3 cut(s)	10, 961, 1648
MboII	GAAGA	6 cut(s)	454, 695, 713, 716, 924, 1016
MflI	RGATCY	4 cut(s)	221, 542, 549, 1705
MlsI	TGGCCA	1 cut(s)	354
MluCI	AATT	8 cut(s)	80, 432, 643, 1019, 1056, 1291, 1391, 1690
MluNI	TGGCCA	1 cut(s)	354
MlyI	GAGTC	2 cut(s)	109, 1464
MmeI	TCCRAC	1 cut(s)	250
Mox20I	TGGCCA	1 cut(s)	354
Mph1103I	ATGCAT	2 cut(s)	181, 403
MroXI	GAANNNNTTC	1 cut(s)	1269
MscI	TGGCCA	1 cut(s)	354
MseI	TTAA	5 cut(s)	128, 737, 864, 906, 1722
MslI	CAYNNNNRTG	2 cut(s)	48, 1110
Msp20I	TGGCCA	1 cut(s)	354
MspA1I	CMGCKG	1 cut(s)	1376
MspCI	CTTAAG	1 cut(s)	863
MspI	CCGG	2 cut(s)	300, 1367
MspR9I	CCNGG	7 cut(s)	33, 614, 812, 986, 1331, 1368, 1714
MvaI	CCWGG	6 cut(s)	33, 614, 812, 986, 1331, 1714
MvnI	CGCG	1 cut(s)	480
MwoI	GCNNNNNNNGC	6 cut(s)	344, 477, 626, 782, 1172, 1237
NciI	CCSGG	1 cut(s)	1368
NcoI	CCATGG	2 cut(s)	287, 509
NlaIV	GGNNCC	6 cut(s)	104, 515, 544, 630, 1372, 1663
NmuCI	GTSAC	1 cut(s)	10
NsiI	ATGCAT	2 cut(s)	181, 403
NspI	RCATGY	3 cut(s)	47, 1115, 1487
NspV	TTCGAA	1 cut(s)	157
PaeI	GCATGC	1 cut(s)	1487
PagI	TCATGA	1 cut(s)	195
PciI	ACATGT	2 cut(s)	43, 1111
PciSI	GCTCTTC	1 cut(s)	726
PdmI	GAANNNNTTC	1 cut(s)	1269
PfeI	GAWTC	6 cut(s)	159, 459, 947, 1047, 1087, 1218
PflFI	GACNNNGTC	3 cut(s)	16, 370, 1541
PfoI	TCCNGGA	2 cut(s)	1366, 1712
PinAI	ACCGGT	1 cut(s)	299
PkrI	GCNGC	3 cut(s)	208, 346, 619
PleI	GAGTC	2 cut(s)	109, 1464
PpsI	GAGTC	2 cut(s)	109, 1464
PpuMI	RGGWCCY	1 cut(s)	1327
PscI	ACATGT	2 cut(s)	43, 1111
Psp5II	RGGWCCY	1 cut(s)	1327
Psp6I	CCWGG	6 cut(s)	31, 612, 810, 984, 1329, 1712
PspGI	CCWGG	6 cut(s)	31, 612, 810, 984, 1329, 1712
PspN4I	GGNNCC	6 cut(s)	104, 515, 544, 630, 1372, 1663
PspPI	GGNCC	5 cut(s)	284, 557, 671, 1165, 1327
PspPPI	RGGWCCY	1 cut(s)	1327
PsuI	RGATCY	4 cut(s)	221, 542, 549, 1705
PsyI	GACNNNGTC	3 cut(s)	16, 370, 1541
RsaI	GTAC	5 cut(s)	30, 417, 1137, 1617, 1663
RsaNI	GTAC	5 cut(s)	29, 416, 1136, 1616, 1662
RseI	CAYNNNNRTG	2 cut(s)	48, 1110
SalI	GTCGAC	1 cut(s)	1535
SapI	GCTCTTC	1 cut(s)	726
SaqAI	TTAA	5 cut(s)	128, 737, 864, 906, 1722
SatI	GCNGC	3 cut(s)	207, 345, 618
Sau96I	GGNCC	5 cut(s)	284, 557, 671, 1165, 1327
SchI	GAGTC	2 cut(s)	109, 1464
ScrFI	CCNGG	7 cut(s)	33, 614, 812, 986, 1331, 1368, 1714
SfaNI	GCATC	3 cut(s)	388, 801, 1132
SfcI	CTRYAG	2 cut(s)	1377, 1632
SfuI	TTCGAA	1 cut(s)	157
SinI	GGWCC	4 cut(s)	284, 557, 671, 1327
SmiMI	CAYNNNNRTG	2 cut(s)	48, 1110
SmlI	CTYRAG	2 cut(s)	518, 863
SmoI	CTYRAG	2 cut(s)	518, 863
SpeI	ACTAGT	1 cut(s)	418
SphI	GCATGC	1 cut(s)	1487
Sse9I	AATT	8 cut(s)	80, 432, 643, 1019, 1056, 1291, 1391, 1690
SsiI	CCGC	3 cut(s)	344, 480, 1374
SspI	AATATT	1 cut(s)	942
SspMI	CTAG	5 cut(s)	419, 1232, 1259, 1280, 1352
StyD4I	CCNGG	7 cut(s)	31, 612, 810, 984, 1329, 1366, 1712
StyI	CCWWGG	4 cut(s)	287, 509, 777, 1309
TaaI	ACNGT	8 cut(s)	10, 359, 370, 967, 1135, 1504, 1543, 1636
TaiI	ACGT	1 cut(s)	20
TaqI	TCGA	5 cut(s)	157, 501, 876, 1344, 1536
TasI	AATT	8 cut(s)	80, 432, 643, 1019, 1056, 1291, 1391, 1690
TatI	WGTACW	3 cut(s)	415, 1135, 1615
TauI	GCSGC	1 cut(s)	347
TfiI	GAWTC	6 cut(s)	159, 459, 947, 1047, 1087, 1218
Tru1I	TTAA	5 cut(s)	128, 737, 864, 906, 1722
Tru9I	TTAA	5 cut(s)	128, 737, 864, 906, 1722
TscAI	CASTG	6 cut(s)	217, 473, 721, 1057, 1546, 1641
TseFI	GTSAC	1 cut(s)	10
TseI	GCWGC	2 cut(s)	206, 617
Tsp45I	GTSAC	1 cut(s)	10
TspDTI	ATGAA	9 cut(s)	269, 589, 685, 871, 944, 1140, 1210, 1426, 1688
TspGWI	ACGGA	1 cut(s)	587
TspRI	CASTG	6 cut(s)	217, 473, 721, 1057, 1546, 1641
Tth111I	GACNNNGTC	3 cut(s)	16, 370, 1541
Vha464I	CTTAAG	1 cut(s)	863
VpaK11BI	GGWCC	4 cut(s)	284, 557, 671, 1327
XagI	CCTNNNNNAGG	2 cut(s)	521, 564
XapI	RAATTY	2 cut(s)	1291, 1391
XceI	RCATGY	3 cut(s)	47, 1115, 1487
XcmI	CCANNNNNNNNNTGG	3 cut(s)	79, 818, 1418
XmiI	GTMKAC	1 cut(s)	1536
XmnI	GAANNNNTTC	1 cut(s)	1269
XspI	CTAG	5 cut(s)	419, 1232, 1259, 1280, 1352
Zsp2I	ATGCAT	2 cut(s)	181, 403

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.