Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0002240

Physical Location & Seq

Genomic Coordinates Forward (+)

39987934 .. 39990858

Gene Structure 2925 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0285200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1509 bp

ATGGCGTCGAAGAAGCAAGGGCGGAGCTTCCCGTCGATCACGCGGTGCGACACCAGCGAAACGGCGTCGTACGAGTCCATCGCTGCGGATCTCGACGGCACTCTCCTCATCTCCCGCAGCTCCTTCCCTTACTTCATGCTCGTCGCAATCGAAGCCGGCAGCCTCCTCCGCGGCTTCGTGCTTCTTCTCTCTCTTCCGCTCGTCATCGTCTCCTACCTCTTCGTCTCCGAAGCCCTCGGCATCCAGATCCTCATCTTCATCTCCTTCGCCGGCCTCAAAGTCCGCGACATCGAGCTCGCCTCACGCGCCGTCCTCCCCAGGTTTTACGCGGCGGATGTGAGGGAGGAGAGCTTCGAGGTGTTCGACAAGTGCAAGAGGAAGGTGGTGGTCACGGCGAATCCGACGCTGATGGTGGAGCCGTTCGTGAAGGATTTTCTGGGCGGAGATAAGGTGCTCGGCACGGAGATCGAGGTGAATCCGAAGACGAAGAAGGCAACTGGTTTTGTGAAGAAGCCGGGGGTTTTGGTAGGGAAGTTGAAGCGTGTGGCTATTGAGAAGGAGTTCGGAAATGAAGTGCCGGAACTTGGGATCGGAGACCGGAGCTCCGATCACGACTTCATGGCTATTTGCAAGGAAGGCTACATGGTTCCCCCAAGCAAATCAGCACGCCCAGTCCCATTGGACCGCCTAAAAAACCGGCTCATCTTCCACGACGGCCGCCTAGTCCAGCGCCCCGACCCACTCAACGCCATCATTACCTATCTCTGGCTCCCATTCGCCTTCGTCCTCTGCATCATGCGCGTCTACATCAACCTTCCCCTCCCCGAACGCATCGTCCCCTACACCTACGCAATGCTCGGTATCAAGCTCAAAATCCGCGGCAACCGCCCCCCACCACCTTCCCCAGGCACACCAGGAAACCTCTACGTCTGCAACCACCGCACCGCCCTCGACCCCATCATCATCGCCATTGCCCTAGGCCGCAAAGTCTCGTGTGTCTCCTACAGCGTCAGCCGCCTCTCTCGGTTCCTCTCCCCCATCCCCACCATCGCTCTCTCCCGCGACCGTGAGGCTGACGCTGCTCGCCTCACCGCCCTTCTCCAAAAGGGCGACCTCGTCGTGTGTCCGGAGGGCACTACGTGCCGAGAGCCGTTCCTGCTTCGTTTCAGTGCTTTGTTCGCAGAAATGAGCGATAGGATCGTCCCGGTGGCGATGGACTGTAAGCAGAGCATGTTCTACGGCACCACCGTGAGAGGGGTTAAGTTTTGGGACCCGTACTTCTTCTTCATGAACCCGAGACCGACTTACGAGGCGACGTTTCTGGACCGGCTTCCGGACGACATGTCCTGCAAGGCGGGGAAGTCGGCGATCGAGGTGGCGAACTACGTGCAGAAGGTGCTGGGTGATGTGCTGGGGTTTGAGCGCACCGGGTTAACTAGGAAGGACAAGTACTTGTTGCTGGGGGGAAATGACGGAAAGGTGGAGTCCATGTACAATGGGAAGAAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0000271 GO:0003674 GO:0003824 GO:0004373 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005975 GO:0005976 GO:0005982 GO:0006073 GO:0008150 GO:0008152 GO:0008194 GO:0009011 GO:0009058 GO:0009059 GO:0009250 GO:0009501 GO:0009507 GO:0009536 GO:0009987 GO:0016051 GO:0016740 GO:0016757 GO:0016758 GO:0017076 GO:0019252 GO:0019863 GO:0019865 GO:0030554 GO:0032553 GO:0032555 GO:0032559 GO:0033692 GO:0034637 GO:0034645 GO:0035251 GO:0036094 GO:0043167 GO:0043168 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043531 GO:0044042 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044424 GO:0044444 GO:0044464 GO:0044877 GO:0046527 GO:0071704 GO:0097159 GO:0097367 GO:1901265 GO:1901363 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00500 ko01100 ko01110 map00500 map01100 map01110

Pfam Domains

Protein Families

Glyco_transf_5 Glycos_transf_1

Protein Analysis

502

Amino Acids

55.87

Weight (kDa)

9.3

Isoelectric Point (pI)

40.19

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
HAD_RAM2_N	PF23270	27 - 216	2.1e-62	Glycerol-3-phosphate acyltransferase RAM2-like, HAD-like domain
HAD	PF12710	28 - 207	6.1e-22	haloacid dehalogenase-like hydrolase
Acyltransferase	PF01553	305 - 405	1.9e-07	Acyltransferase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002240)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G32900
fragaria_vesca	FvH4_5g10580 FvH4_5g10580 FvH4_5g10580 FvH4_5g10580 FvH4_5g10580 FvH4_5g10580 FvH4_7g17630 FvH4_7g17630 FvH4_7g17630 FvH4_7g17630
malus_domestica	MD06G1122100.v1.1 MD07G1159300.v1.1 MD14G1138500.v1.1
prunus_persica	Prupe.2G197400_v2.0.a1 Prupe.2G197400_v2.0.a1 Prupe.2G197400_v2.0.a1 Prupe.5G132800_v2.0.a1 Prupe.5G132800_v2.0.a1
pyrus_communis	pycom01g11240 pycom06g11320 pycom07g15590 pycom14g11360
rosa_chinensis	RchiOBHm_Chr1g0361061 RchiOBHm_Chr7g0187571
rosa_laevigata	RLG00000004770 RLG00000027751
rosa_multiflora	Rmu_co8027448.1_g000001 Rmu_sc0000677.1_g000001 Rmu_ssc0000110.1_g000020
rosa_roxburghii	Rroxscaffold_3G00267310 Rroxscaffold_4G00295460
rosa_rugosa	Rorug01G0285200 Rorug06G0482700
rosa_samantha	Rh1AG296600 Rh1BG260900 Rh1CG278200 Rh1DG290900 Rh7AG087600 Rh7BG088900 Rh7CG088100 Rh7DG089800
rosa_wichuraiana	Rw1G026200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	1 cut(s)	1241
AccBSI	CCGCTC	1 cut(s)	199
AccI	GTMKAC	1 cut(s)	804
AccII	CGCG	8 cut(s)	43, 171, 285, 306, 329, 801, 879, 1062
AccIII	TCCGGA	2 cut(s)	1126, 1333
AclWI	GGATC	4 cut(s)	96, 241, 596, 1205
AcoI	YGGCCR	1 cut(s)	715
AcyI	GRCGYC	2 cut(s)	5, 65
AdeI	CACNNNGTG	2 cut(s)	45, 1140
AfaI	GTAC	4 cut(s)	71, 1277, 1451, 1493
AfiI	CCNNNNNNNGG	5 cut(s)	584, 765, 905, 1254, 1333
AflIII	ACRYGT	1 cut(s)	1341
AgsI	TTSAA	1 cut(s)	538
AhdI	GACNNNNNGTC	1 cut(s)	1342
AjnI	CCWGG	3 cut(s)	317, 904, 913
AleI	CACNNNNGTG	1 cut(s)	1247
AloI	GAACNNNNNNTCC	2 cut(s)	819, 851
AluBI	AGCT	6 cut(s)	27, 120, 295, 351, 603, 868
AluI	AGCT	6 cut(s)	27, 120, 295, 351, 603, 868
Alw21I	GWGCWC	3 cut(s)	297, 456, 605
Alw26I	GTCTC	6 cut(s)	214, 229, 588, 994, 1003, 1291
AlwI	GGATC	4 cut(s)	96, 241, 596, 1205
Ama87I	CYCGRG	1 cut(s)	1294
Aor13HI	TCCGGA	2 cut(s)	1126, 1333
AoxI	GGCC	3 cut(s)	271, 715, 979
ApeKI	GCWGC	4 cut(s)	83, 117, 159, 1079
ArsI	GACNNNNNNTTYG	2 cut(s)	819, 851
Asp700I	GAANNNNTTC	1 cut(s)	560
AspA2I	CCTAGG	1 cut(s)	976
AspLEI	GCGC	4 cut(s)	308, 732, 801, 1425
AspS9I	GGNCC	3 cut(s)	682, 1270, 1324
AsuC2I	CCSGG	3 cut(s)	516, 1205, 1429
AsuHPI	GGTGA	3 cut(s)	484, 1081, 1415
AvaI	CYCGRG	1 cut(s)	1294
AvaII	GGWCC	3 cut(s)	682, 1270, 1324
AvrII	CCTAGG	1 cut(s)	976
BaeGI	GKGCMC	1 cut(s)	1136
BanI	GGYRCC	1 cut(s)	1241
BanII	GRGCYC	2 cut(s)	297, 605
BarI	GAAGNNNNNNTAC	4 cut(s)	1268, 1300, 1433, 1465
BauI	CACGAG	1 cut(s)	991
BbsI	GAAGAC	1 cut(s)	488
Bbv12I	GWGCWC	3 cut(s)	297, 456, 605
BbvI	GCAGC	4 cut(s)	70, 129, 171, 1066
BccI	CCATC	7 cut(s)	86, 403, 758, 965, 1046, 1055, 1207
BceAI	ACGGC	8 cut(s)	78, 112, 293, 403, 408, 730, 1135, 1255
BcgI	CGANNNNNNTGC	6 cut(s)	448, 482, 931, 965, 1369, 1403
BciT130I	CCWGG	3 cut(s)	319, 906, 915
BcnI	CCSGG	3 cut(s)	516, 1205, 1429
BcoDI	GTCTC	6 cut(s)	214, 229, 588, 994, 1003, 1291
BfaI	CTAG	3 cut(s)	722, 977, 1437
BfmI	CTRYAG	1 cut(s)	1003
BfoI	RGCGCY	1 cut(s)	733
BlnI	CCTAGG	1 cut(s)	976
BmcAI	AGTACT	1 cut(s)	1451
Bme1390I	CCNGG	6 cut(s)	319, 516, 906, 915, 1205, 1429
Bme18I	GGWCC	3 cut(s)	682, 1270, 1324
BmeRI	GACNNNNNGTC	1 cut(s)	1342
BmeT110I	CYCGRG	1 cut(s)	1294
BmgT120I	GGNCC	3 cut(s)	682, 1270, 1324
BmiI	GGNNCC	7 cut(s)	417, 648, 770, 1028, 1243, 1271, 1272
BmrFI	CCNGG	6 cut(s)	319, 516, 906, 915, 1205, 1429
BmrI	ACTGGG	1 cut(s)	665
BmsI	GCATC	3 cut(s)	249, 801, 840
BmuI	ACTGGG	1 cut(s)	665
BpiI	GAAGAC	1 cut(s)	488
BplI	GAGNNNNNCTC	2 cut(s)	284, 316
BpuMI	CCSGG	3 cut(s)	516, 1205, 1429
BsaAI	YACGTR	2 cut(s)	1140, 1387
BsaBI	GATNNNNATC	1 cut(s)	251
BsaHI	GRCGYC	2 cut(s)	5, 65
BsaI	GGTCTC	2 cut(s)	588, 1291
BsaJI	CCNNGG	7 cut(s)	169, 235, 317, 515, 877, 904, 976
BsaWI	WCCGGW	3 cut(s)	597, 1126, 1333
BsaXI	ACNNNNNCTCC	6 cut(s)	435, 465, 587, 617, 1475, 1505
Bsc4I	CCNNNNNNNGG	5 cut(s)	584, 765, 905, 1254, 1333
Bse118I	RCCGGY	4 cut(s)	155, 269, 696, 1326
Bse1I	ACTGG	2 cut(s)	502, 671
Bse3DI	GCAATG	2 cut(s)	858, 969
Bse8I	GATNNNNATC	1 cut(s)	251
BseAI	TCCGGA	2 cut(s)	1126, 1333
BseBI	CCWGG	3 cut(s)	319, 906, 915
BseDI	CCNNGG	7 cut(s)	169, 235, 317, 515, 877, 904, 976
BseGI	GGATG	3 cut(s)	240, 340, 1038
BseJI	GATNNNNATC	1 cut(s)	251
BseLI	CCNNNNNNNGG	5 cut(s)	584, 765, 905, 1254, 1333
BseMI	GCAATG	2 cut(s)	858, 969
BseNI	ACTGG	2 cut(s)	502, 671
BseRI	GAGGAG	3 cut(s)	95, 155, 359
BseSI	GKGCMC	1 cut(s)	1136
BseX3I	CGGCCG	1 cut(s)	715
BseXI	GCAGC	4 cut(s)	70, 129, 171, 1066
BseYI	CCCAGC	3 cut(s)	1399, 1411, 1459
BsgI	GTGCAG	1 cut(s)	1409
Bsh1236I	CGCG	8 cut(s)	43, 171, 285, 306, 329, 801, 879, 1062
Bsh1285I	CGRYCG	3 cut(s)	718, 1066, 1371
BshFI	GGCC	3 cut(s)	273, 717, 981
BshNI	GGYRCC	1 cut(s)	1241
BsiEI	CGRYCG	3 cut(s)	718, 1066, 1371
BsiHKAI	GWGCWC	3 cut(s)	297, 456, 605
BsiHKCI	CYCGRG	1 cut(s)	1294
BsiWI	CGTACG	1 cut(s)	69
BslFI	GGGAC	4 cut(s)	659, 821, 1187, 1283
BslI	CCNNNNNNNGG	5 cut(s)	584, 765, 905, 1254, 1333
BsmAI	GTCTC	6 cut(s)	214, 229, 588, 994, 1003, 1291
BsmBI	CGTCTC	2 cut(s)	214, 229
BsmFI	GGGAC	4 cut(s)	659, 821, 1187, 1283
BsnI	GGCC	3 cut(s)	273, 717, 981
Bso31I	GGTCTC	2 cut(s)	588, 1291
BsoBI	CYCGRG	1 cut(s)	1294
Bsp1286I	GDGCHC	4 cut(s)	297, 456, 605, 1136
Bsp13I	TCCGGA	2 cut(s)	1126, 1333
Bsp1407I	TGTACA	1 cut(s)	1491
Bsp143I	GATC	8 cut(s)	36, 88, 246, 465, 588, 607, 1197, 1368
BspANI	GGCC	3 cut(s)	273, 717, 981
BspEI	TCCGGA	2 cut(s)	1126, 1333
BspFNI	CGCG	8 cut(s)	43, 171, 285, 306, 329, 801, 879, 1062
BspHI	TCATGA	1 cut(s)	1287
BspLI	GGNNCC	7 cut(s)	417, 648, 770, 1028, 1243, 1271, 1272
BspPI	GGATC	4 cut(s)	96, 241, 596, 1205
BspT107I	GGYRCC	1 cut(s)	1241
BspTNI	GGTCTC	2 cut(s)	588, 1291
BsrBI	CCGCTC	1 cut(s)	199
BsrDI	GCAATG	2 cut(s)	858, 969
BsrFI	RCCGGY	4 cut(s)	155, 269, 696, 1326
BsrGI	TGTACA	1 cut(s)	1491
BsrI	ACTGG	2 cut(s)	502, 671
BssAI	RCCGGY	4 cut(s)	155, 269, 696, 1326
BssECI	CCNNGG	7 cut(s)	169, 235, 317, 515, 877, 904, 976
BssMI	GATC	8 cut(s)	36, 88, 246, 465, 588, 607, 1197, 1368
BssNI	GRCGYC	2 cut(s)	5, 65
BssSI	CACGAG	1 cut(s)	991
BssT1I	CCWWGG	1 cut(s)	976
Bst2BI	CACGAG	1 cut(s)	991
Bst2UI	CCWGG	3 cut(s)	319, 906, 915
Bst4CI	ACNGT	3 cut(s)	1067, 1220, 1249
Bst6I	CTCTTC	2 cut(s)	198, 224
BstACI	GRCGYC	2 cut(s)	5, 65
BstAPI	GCANNNNNTGC	2 cut(s)	1140, 1396
BstAUI	TGTACA	1 cut(s)	1491
BstBAI	YACGTR	2 cut(s)	1140, 1387
BstC8I	GCNNGC	5 cut(s)	157, 271, 297, 667, 1084
BstDSI	CCRYGG	2 cut(s)	169, 877
BstENI	CCTNNNNNAGG	1 cut(s)	903
BstF5I	GGATG	3 cut(s)	240, 340, 1038
BstFNI	CGCG	8 cut(s)	43, 171, 285, 306, 329, 801, 879, 1062
BstH2I	RGCGCY	1 cut(s)	733
BstHHI	GCGC	4 cut(s)	308, 732, 801, 1425
BstKTI	GATC	8 cut(s)	39, 91, 249, 468, 591, 610, 1200, 1371
BstMAI	GTCTC	6 cut(s)	214, 229, 588, 994, 1003, 1291
BstMBI	GATC	8 cut(s)	36, 88, 246, 465, 588, 607, 1197, 1368
BstMCI	CGRYCG	3 cut(s)	718, 1066, 1371
BstNI	CCWGG	3 cut(s)	319, 906, 915
BstNSI	RCATGY	2 cut(s)	1234, 1345
BstSCI	CCNGG	6 cut(s)	317, 514, 904, 913, 1203, 1427
BstSFI	CTRYAG	1 cut(s)	1003
BstSLI	GKGCMC	1 cut(s)	1136
BstUI	CGCG	8 cut(s)	43, 171, 285, 306, 329, 801, 879, 1062
BstV1I	GCAGC	4 cut(s)	70, 129, 171, 1066
BstV2I	GAAGAC	1 cut(s)	488
BstX2I	RGATCY	2 cut(s)	88, 246
BstYI	RGATCY	2 cut(s)	88, 246
BstZI	CGGCCG	1 cut(s)	715
BsuRI	GGCC	3 cut(s)	273, 717, 981
BtgI	CCRYGG	2 cut(s)	169, 877
BtgZI	GCGATG	4 cut(s)	64, 949, 1033, 1226
BtsCI	GGATG	3 cut(s)	240, 340, 1038
BtsIMutI	CAGTG	1 cut(s)	1174
Cac8I	GCNNGC	5 cut(s)	157, 271, 297, 667, 1084
CciI	TCATGA	1 cut(s)	1287
CfoI	GCGC	4 cut(s)	308, 732, 801, 1425
Cfr10I	RCCGGY	4 cut(s)	155, 269, 696, 1326
Cfr13I	GGNCC	3 cut(s)	682, 1270, 1324
Cfr42I	CCGCGG	2 cut(s)	172, 880
CseI	GACGC	5 cut(s)	54, 412, 790, 997, 1085
Csp6I	GTAC	4 cut(s)	70, 1276, 1450, 1492
CviAII	CATG	8 cut(s)	136, 619, 643, 796, 1231, 1288, 1342, 1489
CviQI	GTAC	4 cut(s)	70, 1276, 1450, 1492
DpnI	GATC	8 cut(s)	38, 90, 248, 467, 590, 609, 1199, 1370
DpnII	GATC	8 cut(s)	36, 88, 246, 465, 588, 607, 1197, 1368
DraIII	CACNNNGTG	2 cut(s)	45, 1140
DriI	GACNNNNNGTC	1 cut(s)	1342
EaeI	YGGCCR	1 cut(s)	715
EagI	CGGCCG	1 cut(s)	715
Eam1104I	CTCTTC	2 cut(s)	198, 224
Eam1105I	GACNNNNNGTC	1 cut(s)	1342
EarI	CTCTTC	2 cut(s)	198, 224
EciI	GGCGGA	3 cut(s)	37, 347, 456
Ecl136II	GAGCTC	2 cut(s)	295, 603
EclXI	CGGCCG	1 cut(s)	715
Eco130I	CCWWGG	1 cut(s)	976
Eco24I	GRGCYC	2 cut(s)	297, 605
Eco31I	GGTCTC	2 cut(s)	588, 1291
Eco47I	GGWCC	3 cut(s)	682, 1270, 1324
Eco52I	CGGCCG	1 cut(s)	715
Eco53kI	GAGCTC	2 cut(s)	295, 603
Eco88I	CYCGRG	1 cut(s)	1294
EcoICRI	GAGCTC	2 cut(s)	295, 603
EcoNI	CCTNNNNNAGG	1 cut(s)	903
EcoO109I	RGGNCCY	1 cut(s)	1270
EcoRII	CCWGG	3 cut(s)	317, 904, 913
EcoT14I	CCWWGG	1 cut(s)	976
EcoT38I	GRGCYC	2 cut(s)	297, 605
ErhI	CCWWGG	1 cut(s)	976
Esp3I	CGTCTC	2 cut(s)	214, 229
FaeI	CATG	8 cut(s)	139, 622, 646, 799, 1234, 1291, 1345, 1492
FaiI	YATR	8 cut(s)	137, 620, 644, 797, 1232, 1289, 1343, 1490
FaqI	GGGAC	4 cut(s)	659, 821, 1187, 1283
FatI	CATG	8 cut(s)	135, 618, 642, 795, 1230, 1287, 1341, 1488
FauI	CCCGC	3 cut(s)	122, 1067, 1348
FblI	GTMKAC	1 cut(s)	804
FokI	GGATG	3 cut(s)	227, 347, 1025
FriOI	GRGCYC	2 cut(s)	297, 605
FspBI	CTAG	3 cut(s)	722, 977, 1437
GlaI	GCGC	4 cut(s)	307, 731, 800, 1424
GsaI	CCCAGC	3 cut(s)	1403, 1415, 1463
HaeII	RGCGCY	1 cut(s)	733
HaeIII	GGCC	3 cut(s)	273, 717, 981
HgaI	GACGC	5 cut(s)	54, 412, 790, 997, 1085
HhaI	GCGC	4 cut(s)	308, 732, 801, 1425
Hin1I	GRCGYC	2 cut(s)	5, 65
Hin1II	CATG	8 cut(s)	139, 622, 646, 799, 1234, 1291, 1345, 1492
Hin6I	GCGC	4 cut(s)	306, 730, 799, 1423
HinP1I	GCGC	4 cut(s)	306, 730, 799, 1423
HincII	GTYRAC	1 cut(s)	1434
HindII	GTYRAC	1 cut(s)	1434
HinfI	GANTC	4 cut(s)	74, 397, 475, 1484
HpaI	GTTAAC	1 cut(s)	1434
HphI	GGTGA	3 cut(s)	484, 1081, 1415
Hpy166II	GTNNAC	2 cut(s)	805, 1434
Hpy188I	TCNGA	6 cut(s)	229, 402, 480, 566, 593, 607
Hpy188III	TCNNGA	8 cut(s)	92, 244, 424, 611, 1127, 1288, 1322, 1334
Hpy8I	GTNNAC	2 cut(s)	805, 1434
Hpy99I	CGWCG	9 cut(s)	10, 37, 70, 98, 146, 406, 716, 1121, 1318
HpyCH4III	ACNGT	3 cut(s)	1067, 1220, 1249
HpyCH4IV	ACGT	4 cut(s)	927, 1139, 1316, 1386
HpyCH4V	TGCA	6 cut(s)	372, 630, 792, 933, 1350, 1390
HpySE526I	ACGT	4 cut(s)	927, 1139, 1316, 1386
Hsp92I	GRCGYC	2 cut(s)	5, 65
Hsp92II	CATG	8 cut(s)	139, 622, 646, 799, 1234, 1291, 1345, 1492
HspAI	GCGC	4 cut(s)	306, 730, 799, 1423
KflI	GGGWCCC	1 cut(s)	1270
Kpn2I	TCCGGA	2 cut(s)	1126, 1333
KroI	GCCGGC	2 cut(s)	155, 269
KroNI	GCCGGC	2 cut(s)	157, 271
KspAI	GTTAAC	1 cut(s)	1434
KspI	CCGCGG	2 cut(s)	172, 880
Kzo9I	GATC	8 cut(s)	36, 88, 246, 465, 588, 607, 1197, 1368
LmnI	GCTCC	6 cut(s)	24, 125, 415, 600, 608, 774
Lsp1109I	GCAGC	4 cut(s)	70, 129, 171, 1066
LweI	GCATC	3 cut(s)	249, 801, 840
MaeI	CTAG	3 cut(s)	722, 977, 1437
MaeII	ACGT	4 cut(s)	927, 1139, 1316, 1386
MaeIII	GTNAC	1 cut(s)	388
MalI	GATC	8 cut(s)	38, 90, 248, 467, 590, 609, 1199, 1370
MbiI	CCGCTC	1 cut(s)	199
MboI	GATC	8 cut(s)	36, 88, 246, 465, 588, 607, 1197, 1368
MflI	RGATCY	2 cut(s)	88, 246
MhlI	GDGCHC	4 cut(s)	297, 456, 605, 1136
MlyI	GAGTC	2 cut(s)	83, 1493
MmeI	TCCRAC	1 cut(s)	425
MroI	TCCGGA	2 cut(s)	1126, 1333
MroNI	GCCGGC	2 cut(s)	155, 269
MroXI	GAANNNNTTC	1 cut(s)	560
MseI	TTAA	2 cut(s)	1260, 1433
MslI	CAYNNNNRTG	1 cut(s)	1247
MspA1I	CMGCKG	2 cut(s)	171, 879
MspR9I	CCNGG	6 cut(s)	319, 516, 906, 915, 1205, 1429
MvaI	CCWGG	3 cut(s)	319, 906, 915
MvnI	CGCG	8 cut(s)	43, 171, 285, 306, 329, 801, 879, 1062
NaeI	GCCGGC	2 cut(s)	157, 271
NciI	CCSGG	3 cut(s)	516, 1205, 1429
NdeII	GATC	8 cut(s)	36, 88, 246, 465, 588, 607, 1197, 1368
NgoMIV	GCCGGC	2 cut(s)	155, 269
NlaIII	CATG	8 cut(s)	139, 622, 646, 799, 1234, 1291, 1345, 1492
NlaIV	GGNNCC	7 cut(s)	417, 648, 770, 1028, 1243, 1271, 1272
NmeAIII	GCCGAG	3 cut(s)	216, 435, 1169
NmuCI	GTSAC	1 cut(s)	388
NspI	RCATGY	2 cut(s)	1234, 1345
OliI	CACNNNNGTG	1 cut(s)	1247
PagI	TCATGA	1 cut(s)	1287
PciI	ACATGT	1 cut(s)	1341
PcsI	WCGNNNNNNNCGW	4 cut(s)	147, 360, 398, 1245
PdiI	GCCGGC	2 cut(s)	157, 271
PdmI	GAANNNNTTC	1 cut(s)	560
PfeI	GAWTC	2 cut(s)	397, 475
Pfl23II	CGTACG	1 cut(s)	69
PflFI	GACNNNGTC	1 cut(s)	1115
Ple19I	CGATCG	1 cut(s)	1371
PleI	GAGTC	2 cut(s)	82, 1492
PpsI	GAGTC	2 cut(s)	82, 1492
Ppu21I	YACGTR	2 cut(s)	1140, 1387
PpuMI	RGGWCCY	1 cut(s)	1270
PscI	ACATGT	1 cut(s)	1341
Psp124BI	GAGCTC	2 cut(s)	297, 605
Psp5II	RGGWCCY	1 cut(s)	1270
Psp6I	CCWGG	3 cut(s)	317, 904, 913
PspFI	CCCAGC	3 cut(s)	1399, 1411, 1459
PspGI	CCWGG	3 cut(s)	317, 904, 913
PspLI	CGTACG	1 cut(s)	69
PspN4I	GGNNCC	7 cut(s)	417, 648, 770, 1028, 1243, 1271, 1272
PspPI	GGNCC	3 cut(s)	682, 1270, 1324
PspPPI	RGGWCCY	1 cut(s)	1270
PsuI	RGATCY	2 cut(s)	88, 246
PsyI	GACNNNGTC	1 cut(s)	1115
PvuI	CGATCG	1 cut(s)	1371
RsaI	GTAC	4 cut(s)	71, 1277, 1451, 1493
RsaNI	GTAC	4 cut(s)	70, 1276, 1450, 1492
RseI	CAYNNNNRTG	1 cut(s)	1247
SacI	GAGCTC	2 cut(s)	297, 605
SacII	CCGCGG	2 cut(s)	172, 880
SaqAI	TTAA	2 cut(s)	1260, 1433
Sau3AI	GATC	8 cut(s)	36, 88, 246, 465, 588, 607, 1197, 1368
Sau96I	GGNCC	3 cut(s)	682, 1270, 1324
ScaI	AGTACT	1 cut(s)	1451
SchI	GAGTC	2 cut(s)	83, 1493
ScrFI	CCNGG	6 cut(s)	319, 516, 906, 915, 1205, 1429
SduI	GDGCHC	4 cut(s)	297, 456, 605, 1136
SfaNI	GCATC	3 cut(s)	249, 801, 840
SfcI	CTRYAG	1 cut(s)	1003
Sfr303I	CCGCGG	2 cut(s)	172, 880
SgrBI	CCGCGG	2 cut(s)	172, 880
SinI	GGWCC	3 cut(s)	682, 1270, 1324
SmiMI	CAYNNNNRTG	1 cut(s)	1247
SspMI	CTAG	3 cut(s)	722, 977, 1437
SstI	GAGCTC	2 cut(s)	297, 605
StyD4I	CCNGG	6 cut(s)	317, 514, 904, 913, 1203, 1427
StyI	CCWWGG	1 cut(s)	976
TaaI	ACNGT	3 cut(s)	1067, 1220, 1249
TaiI	ACGT	4 cut(s)	930, 1142, 1319, 1389
TaqII	GACCGA	1 cut(s)	1315
TatI	WGTACW	2 cut(s)	1449, 1491
TauI	GCSGC	6 cut(s)	174, 332, 720, 882, 984, 1017
TfiI	GAWTC	2 cut(s)	397, 475
Tru1I	TTAA	2 cut(s)	1260, 1433
Tru9I	TTAA	2 cut(s)	1260, 1433
TscAI	CASTG	1 cut(s)	1174
TseFI	GTSAC	1 cut(s)	388
TseI	GCWGC	4 cut(s)	83, 117, 159, 1079
Tsp45I	GTSAC	1 cut(s)	388
TspDTI	ATGAA	6 cut(s)	124, 247, 585, 607, 1276, 1304
TspGWI	ACGGA	2 cut(s)	476, 1488
TspRI	CASTG	1 cut(s)	1174
Tth111I	GACNNNGTC	1 cut(s)	1115
VpaK11BI	GGWCC	3 cut(s)	682, 1270, 1324
XagI	CCTNNNNNAGG	1 cut(s)	903
XceI	RCATGY	2 cut(s)	1234, 1345
XmaJI	CCTAGG	1 cut(s)	976
XmiI	GTMKAC	1 cut(s)	804
XmnI	GAANNNNTTC	1 cut(s)	560
XspI	CTAG	3 cut(s)	722, 977, 1437
ZrmI	AGTACT	1 cut(s)	1451

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.