Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0002240

Physical Location & Seq

Genomic Coordinates Forward (+)

60387550 .. 60391853

Gene Structure 4304 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00267310.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1836 bp

ATGGCAGCTGTGACAACCTCAAACCTTGTACCTCGCACTTCACATGCTAATGGAGCTTCAGGGTCACAAAACAGGACAAACTTGGGACAGATGGGTCTGTGGAACCAACCCATGACTCACAATGGGTTGAGATCTTTGAGCAACTTGGATATGCTTCGGATCCGAACCGGTCCTAGTGCATATTCTATGCAAGTCATGAGAAAGGCTGCGAGTGATATTGGATCTGTGGGGAGGATTGTCTGCGGTCAAGGAATGAACTTGGTCTTTGTTGGAGCTGAAGTCGGTCCGTGGAGCAAAACTGGTGGTCTTGGTGATGTTCTCGGAGGTCTCCCACCAGCTATGGCGGCTAATGGCCACCGTGTTATGACGGTGTCTCCTCGCTATGATCAATACAAAGATGCATGGGACACTAGTGTACTAGTTGAGATAGAAGTTGGTGGCAAAGTTGAAACTGTTCGATTCTTCCACTGCTACAAACGCGGAGTTGATCGTGTATTTGTGGATCATCCATGGTTCCTTGAGAAGGTATGGGGTAAAACAGGATCCAAGATCTATGGGCCTAAGACAGGAGAGGATTACAAGGACAACCAATTGCGCTTCAGCTTGTTGTGCCAGGCTGCGCTGGAGGCACCGAGGGTTCTCAATTTGAACAGCAACGAATACTTCTCTGGACCTTATGGAGAGGATGTTGTGTTCATTTGCAATGATTGGCACACTGCTCTTGTTCCTTGCTACTTAAAAACCATCTACAAACCAATGGGAGTTTACACAAGTGCCAAGGTTGCATTCTGCATCCACAATATAGCTTACCAGGGAAGATTTCCTATTCAGGACTTCGAACTCCTTGATTTACCTGGCCAACTTAAGGGTTCTTTCGACTTCATTGACGGGTATAACAAGCCTGTGAAAGGAAGAAAAATCAACTGGATGAAAGCTGGAATACTGGAATCAGACAGGGTTATTACTGTAAGCCCTTACTATGCACAGGAACTTATTTCTGGAGAAGACAAAGGTGTGGAATTAGATAACATTATTCGTAAGACTGGAATCACTGGAATTGTGAATGGCATGGATGTTCAAGAGTGGAATCCAGCCACAGACAAATACTTAAATGTCAACTATGATGAAACAACAGTACTGGATGCAAAGCCTCTTTTGAAGGAGGCCCTTCAAGCCGAAGTTGGGCTGCCAGTGGACAGGGACATCCCATTAATAGGCTTCATTGGTAGGCTAGAGGAGCAGAAAGGTTCAGATATTCTAGTGGAAGCCATTCCAGAATTGGCAGGAGAGAATTTGCAAATAATAGTCCTTGGAACTGGCAAAAAGTACCTGGAGAAGCAGATTAAACAGCTGGAGACAAAATATCCTGGCACGGCTGTAGGCGTTCTGAAATTCAATGTTCCATTAGCCCACATGATTATTGGTGGTGCTGATTTTATGTTGATCCCGAGTAGATTTGAACCATGTGGTCTCATACAGTTGCATGCCATGAGATATGGAACAGTTCCCATTGTTGCTTCAACTGGTGGACTTGTCGACACTGTCAAGGAAGGTTTTACAGGATTTCAAATGGGAGCTTTCAATGTTGATTGCGAAGCAGTTGATCCGGCAGATGTACTTGCAATATCTACTACGGTGAAGAGAGCTGTTACAAGCTATGGTACTGCTGCCATGAAAGAAATGATCCAGAATTGCATGGCAAAAGATCTTTCCTGGAAGGAACCTGCCAAACAATGGGAAAAGATGCTGTTGAGCCTGGAAGTTGCTGGTGCCGAACCTGGCTTTGAAGGGGAAGAGATTGCTCCTCTTGCCAAGGAAAACGTTGCCACCCCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0000271 GO:0003674 GO:0003824 GO:0004373 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005975 GO:0005976 GO:0005982 GO:0006073 GO:0008150 GO:0008152 GO:0008194 GO:0009011 GO:0009058 GO:0009059 GO:0009250 GO:0009501 GO:0009507 GO:0009536 GO:0009569 GO:0009987 GO:0016051 GO:0016740 GO:0016757 GO:0016758 GO:0017076 GO:0019252 GO:0019863 GO:0019865 GO:0030554 GO:0032553 GO:0032555 GO:0032559 GO:0033692 GO:0034637 GO:0034645 GO:0035251 GO:0036094 GO:0043036 GO:0043167 GO:0043168 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043531 GO:0044042 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0044877 GO:0046527 GO:0071704 GO:0097159 GO:0097367 GO:1901265 GO:1901363 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00500 ko01100 ko01110 map00500 map01100 map01110

Pfam Domains

Protein Families

Glyco_transf_5 Glycos_transf_1

Protein Analysis

611

Amino Acids

66.95

Weight (kDa)

5.75

Isoelectric Point (pI)

21.85

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_transf_5	PF08323	87 - 347	1.6e-66	Starch synthase catalytic domain
GT4-conflict	PF20706	376 - 577	1.8e-09	Family 4 Glycosyltransferase in conflict systems
Glycos_transf_1	PF00534	401 - 523	1.9e-16	Glycosyl transferases group 1
Glyco_trans_1_4	PF13692	403 - 524	3.2e-15	Glycosyl transferases group 1

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002240)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G32900
fragaria_vesca	FvH4_5g10580 FvH4_5g10580 FvH4_5g10580 FvH4_5g10580 FvH4_5g10580 FvH4_5g10580 FvH4_7g17630 FvH4_7g17630 FvH4_7g17630 FvH4_7g17630
malus_domestica	MD06G1122100.v1.1 MD07G1159300.v1.1 MD14G1138500.v1.1
prunus_persica	Prupe.2G197400_v2.0.a1 Prupe.2G197400_v2.0.a1 Prupe.2G197400_v2.0.a1 Prupe.5G132800_v2.0.a1 Prupe.5G132800_v2.0.a1
pyrus_communis	pycom01g11240 pycom06g11320 pycom07g15590 pycom14g11360
rosa_chinensis	RchiOBHm_Chr1g0361061 RchiOBHm_Chr7g0187571
rosa_laevigata	RLG00000004770 RLG00000027751
rosa_multiflora	Rmu_co8027448.1_g000001 Rmu_sc0000677.1_g000001 Rmu_ssc0000110.1_g000020
rosa_roxburghii	Rroxscaffold_3G00267310 Rroxscaffold_4G00295460
rosa_rugosa	Rorug01G0285200 Rorug06G0482700
rosa_samantha	Rh1AG296600 Rh1BG260900 Rh1CG278200 Rh1DG290900 Rh7AG087600 Rh7BG088900 Rh7CG088100 Rh7DG089800
rosa_wichuraiana	Rw1G026200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	93
Acc36I	ACCTGC	1 cut(s)	1732
AccB1I	GGYRCC	2 cut(s)	628, 1769
AccB7I	CCANNNNNTGG	1 cut(s)	1734
AccI	GTMKAC	1 cut(s)	1536
AccII	CGCG	1 cut(s)	480
AciI	CCGC	3 cut(s)	243, 344, 480
AclI	AACGTT	1 cut(s)	1821
AclWI	GGATC	9 cut(s)	154, 167, 229, 510, 537, 550, 1438, 1598, 1678
AcoI	YGGCCR	2 cut(s)	352, 856
AcsI	RAATTY	2 cut(s)	1291, 1391
AcuI	CTGAAG	3 cut(s)	42, 297, 583
AfaI	GTAC	6 cut(s)	30, 417, 1137, 1328, 1617, 1663
AfiI	CCNNNNNNNGG	7 cut(s)	523, 566, 865, 908, 1182, 1214, 1734
AflII	CTTAAG	1 cut(s)	863
AgeI	ACCGGT	1 cut(s)	167
AhlI	ACTAGT	2 cut(s)	410, 418
AjnI	CCWGG	8 cut(s)	612, 810, 853, 1329, 1366, 1712, 1755, 1777
AjuI	GAANNNNNNNTTGG	2 cut(s)	770, 802
AloI	GAACNNNNNNTCC	2 cut(s)	677, 709
Alw26I	GTCTC	4 cut(s)	332, 378, 1349, 1475
AlwI	GGATC	9 cut(s)	154, 167, 229, 510, 537, 550, 1438, 1598, 1678
Ama87I	CYCGRG	1 cut(s)	1447
AoxI	GGCC	4 cut(s)	352, 557, 856, 1164
ApeKI	GCWGC	5 cut(s)	5, 206, 617, 1186, 1667
ApoI	RAATTY	2 cut(s)	1291, 1391
AseI	ATTAAT	1 cut(s)	1211
AsiGI	ACCGGT	1 cut(s)	167
Asp700I	GAANNNNTTC	2 cut(s)	453, 1269
AspLEI	GCGC	2 cut(s)	597, 622
AspS9I	GGNCC	5 cut(s)	170, 284, 557, 671, 1165
AsuHPI	GGTGA	2 cut(s)	323, 1648
AsuII	TTCGAA	1 cut(s)	837
AvaI	CYCGRG	1 cut(s)	1447
AvaII	GGWCC	3 cut(s)	170, 284, 671
BalI	TGGCCA	2 cut(s)	354, 858
BamHI	GGATCC	2 cut(s)	159, 542
BanI	GGYRCC	2 cut(s)	628, 1769
BbsI	GAAGAC	1 cut(s)	1011
BbvI	GCAGC	5 cut(s)	17, 193, 604, 1173, 1654
BccI	CCATC	2 cut(s)	85, 752
BceAI	ACGGC	1 cut(s)	1389
BciT130I	CCWGG	8 cut(s)	614, 812, 855, 1331, 1368, 1714, 1757, 1779
BclI	TGATCA	1 cut(s)	385
BcoDI	GTCTC	4 cut(s)	332, 378, 1349, 1475
BcuI	ACTAGT	2 cut(s)	410, 418
BfaI	CTAG	5 cut(s)	174, 411, 419, 1232, 1259
BfmI	CTRYAG	1 cut(s)	1377
BfrI	CTTAAG	1 cut(s)	863
BfuAI	ACCTGC	1 cut(s)	1732
BglII	AGATCT	3 cut(s)	131, 549, 1705
BisI	GCNGC	6 cut(s)	6, 207, 345, 618, 1187, 1668
BlsI	GCNGC	6 cut(s)	7, 208, 346, 619, 1188, 1669
BmcAI	AGTACT	1 cut(s)	1137
Bme1390I	CCNGG	8 cut(s)	614, 812, 855, 1331, 1368, 1714, 1757, 1779
Bme18I	GGWCC	3 cut(s)	170, 284, 671
BmeT110I	CYCGRG	1 cut(s)	1447
BmgT120I	GGNCC	5 cut(s)	170, 284, 557, 671, 1165
BmiI	GGNNCC	7 cut(s)	104, 161, 515, 544, 630, 1722, 1771
BmrFI	CCNGG	8 cut(s)	614, 812, 855, 1331, 1368, 1714, 1757, 1779
BmsI	GCATC	4 cut(s)	388, 801, 1132, 1734
BpiI	GAAGAC	1 cut(s)	1011
BpmI	CTGGAG	4 cut(s)	644, 1020, 1352, 1373
Bpu14I	TTCGAA	1 cut(s)	837
BpuEI	CTTGAG	1 cut(s)	539
BsaI	GGTCTC	2 cut(s)	332, 1475
BsaJI	CCNNGG	7 cut(s)	287, 509, 632, 777, 811, 1309, 1812
BsaWI	WCCGGW	1 cut(s)	167
BsaXI	ACNNNNNCTCC	6 cut(s)	264, 294, 358, 388, 672, 702
Bsc4I	CCNNNNNNNGG	7 cut(s)	523, 566, 865, 908, 1182, 1214, 1734
Bse118I	RCCGGY	1 cut(s)	167
Bse1I	ACTGG	9 cut(s)	304, 929, 948, 1048, 1057, 1143, 1190, 1321, 1528
Bse3DI	GCAATG	1 cut(s)	709
BseBI	CCWGG	8 cut(s)	614, 812, 855, 1331, 1368, 1714, 1757, 1779
BseDI	CCNNGG	7 cut(s)	287, 509, 632, 777, 811, 1309, 1812
BseGI	GGATG	7 cut(s)	505, 691, 792, 933, 1078, 1147, 1203
BseLI	CCNNNNNNNGG	7 cut(s)	523, 566, 865, 908, 1182, 1214, 1734
BseMI	GCAATG	1 cut(s)	709
BseNI	ACTGG	9 cut(s)	304, 929, 948, 1048, 1057, 1143, 1190, 1321, 1528
BseRI	GAGGAG	3 cut(s)	366, 1250, 1794
BseXI	GCAGC	5 cut(s)	17, 193, 604, 1173, 1654
Bsh1236I	CGCG	1 cut(s)	480
BshFI	GGCC	4 cut(s)	354, 559, 858, 1166
BshNI	GGYRCC	2 cut(s)	628, 1769
BshTI	ACCGGT	1 cut(s)	167
BsiHKCI	CYCGRG	1 cut(s)	1447
BsiSI	CCGG	2 cut(s)	168, 1607
BslFI	GGGAC	3 cut(s)	99, 419, 1214
BslI	CCNNNNNNNGG	7 cut(s)	523, 566, 865, 908, 1182, 1214, 1734
BsmAI	GTCTC	4 cut(s)	332, 378, 1349, 1475
BsmFI	GGGAC	3 cut(s)	99, 419, 1214
BsmI	GAATGC	1 cut(s)	785
BsnI	GGCC	4 cut(s)	354, 559, 858, 1166
Bso31I	GGTCTC	2 cut(s)	332, 1475
BsoBI	CYCGRG	1 cut(s)	1447
Bsp119I	TTCGAA	1 cut(s)	837
Bsp19I	CCATGG	1 cut(s)	509
BspACI	CCGC	3 cut(s)	243, 344, 480
BspANI	GGCC	4 cut(s)	354, 559, 858, 1166
BspFNI	CGCG	1 cut(s)	480
BspHI	TCATGA	1 cut(s)	195
BspLI	GGNNCC	7 cut(s)	104, 161, 515, 544, 630, 1722, 1771
BspMI	ACCTGC	1 cut(s)	1732
BspPI	GGATC	9 cut(s)	154, 167, 229, 510, 537, 550, 1438, 1598, 1678
BspT104I	TTCGAA	1 cut(s)	837
BspT107I	GGYRCC	2 cut(s)	628, 1769
BspTI	CTTAAG	1 cut(s)	863
BspTNI	GGTCTC	2 cut(s)	332, 1475
BsrDI	GCAATG	1 cut(s)	709
BsrFI	RCCGGY	1 cut(s)	167
BsrI	ACTGG	9 cut(s)	304, 929, 948, 1048, 1057, 1143, 1190, 1321, 1528
BssAI	RCCGGY	1 cut(s)	167
BssECI	CCNNGG	7 cut(s)	287, 509, 632, 777, 811, 1309, 1812
BssT1I	CCWWGG	4 cut(s)	509, 777, 1309, 1812
Bst2UI	CCWGG	8 cut(s)	614, 812, 855, 1331, 1368, 1714, 1757, 1779
Bst4CI	ACNGT	9 cut(s)	359, 370, 454, 967, 1135, 1479, 1504, 1543, 1636
Bst6I	CTCTTC	2 cut(s)	1634, 1788
BstAFI	CTTAAG	1 cut(s)	863
BstBI	TTCGAA	1 cut(s)	837
BstC8I	GCNNGC	1 cut(s)	1485
BstDEI	CTNAG	1 cut(s)	561
BstDSI	CCRYGG	2 cut(s)	287, 509
BstENI	CCTNNNNNAGG	3 cut(s)	521, 564, 906
BstF5I	GGATG	7 cut(s)	505, 691, 792, 933, 1078, 1147, 1203
BstFNI	CGCG	1 cut(s)	480
BstHHI	GCGC	2 cut(s)	597, 622
BstMAI	GTCTC	4 cut(s)	332, 378, 1349, 1475
BstMWI	GCNNNNNNNGC	9 cut(s)	53, 344, 477, 609, 626, 782, 1172, 1237, 1808
BstNI	CCWGG	8 cut(s)	614, 812, 855, 1331, 1368, 1714, 1757, 1779
BstNSI	RCATGY	2 cut(s)	47, 1487
BstSCI	CCNGG	8 cut(s)	612, 810, 853, 1329, 1366, 1712, 1755, 1777
BstSFI	CTRYAG	1 cut(s)	1377
BstUI	CGCG	1 cut(s)	480
BstV1I	GCAGC	5 cut(s)	17, 193, 604, 1173, 1654
BstV2I	GAAGAC	1 cut(s)	1011
BstX2I	RGATCY	6 cut(s)	131, 159, 221, 542, 549, 1705
BstYI	RGATCY	6 cut(s)	131, 159, 221, 542, 549, 1705
BsuRI	GGCC	4 cut(s)	354, 559, 858, 1166
BtgI	CCRYGG	2 cut(s)	287, 509
BtsCI	GGATG	7 cut(s)	505, 691, 792, 933, 1078, 1147, 1203
BtsI	GCAGTG	2 cut(s)	466, 714
BtsIMutI	CAGTG	5 cut(s)	466, 714, 1050, 1197, 1539
BveI	ACCTGC	1 cut(s)	1732
Cac8I	GCNNGC	1 cut(s)	1485
CciI	TCATGA	1 cut(s)	195
CfoI	GCGC	2 cut(s)	597, 622
Cfr10I	RCCGGY	1 cut(s)	167
Cfr13I	GGNCC	5 cut(s)	170, 284, 557, 671, 1165
CpoI	CGGWCCG	1 cut(s)	284
Csp6I	GTAC	6 cut(s)	29, 416, 1136, 1327, 1616, 1662
CspAI	ACCGGT	1 cut(s)	167
CspCI	CAANNNNNGTGG	2 cut(s)	283, 318
CspI	CGGWCCG	1 cut(s)	284
CviQI	GTAC	6 cut(s)	29, 416, 1136, 1327, 1616, 1662
DdeI	CTNAG	1 cut(s)	561
DrdI	GACNNNNNNGTC	1 cut(s)	93
DseDI	GACNNNNNNGTC	1 cut(s)	93
EaeI	YGGCCR	2 cut(s)	352, 856
Eam1104I	CTCTTC	2 cut(s)	1634, 1788
EarI	CTCTTC	2 cut(s)	1634, 1788
Eco130I	CCWWGG	4 cut(s)	509, 777, 1309, 1812
Eco31I	GGTCTC	2 cut(s)	332, 1475
Eco47I	GGWCC	3 cut(s)	170, 284, 671
Eco57I	CTGAAG	3 cut(s)	42, 297, 583
Eco88I	CYCGRG	1 cut(s)	1447
EcoNI	CCTNNNNNAGG	3 cut(s)	521, 564, 906
EcoO109I	RGGNCCY	1 cut(s)	1165
EcoRII	CCWGG	8 cut(s)	612, 810, 853, 1329, 1366, 1712, 1755, 1777
EcoT14I	CCWWGG	4 cut(s)	509, 777, 1309, 1812
EcoT22I	ATGCAT	1 cut(s)	403
ErhI	CCWWGG	4 cut(s)	509, 777, 1309, 1812
FaqI	GGGAC	3 cut(s)	99, 419, 1214
FbaI	TGATCA	1 cut(s)	385
FblI	GTMKAC	1 cut(s)	1536
Fnu4HI	GCNGC	6 cut(s)	6, 207, 345, 618, 1187, 1668
FokI	GGATG	7 cut(s)	492, 698, 779, 940, 1085, 1154, 1190
Fsp4HI	GCNGC	6 cut(s)	6, 207, 345, 618, 1187, 1668
FspBI	CTAG	5 cut(s)	174, 411, 419, 1232, 1259
GlaI	GCGC	2 cut(s)	596, 621
GluI	GCNGC	6 cut(s)	6, 207, 345, 618, 1187, 1668
GsuI	CTGGAG	4 cut(s)	644, 1020, 1352, 1373
HaeIII	GGCC	4 cut(s)	354, 559, 858, 1166
HapII	CCGG	2 cut(s)	168, 1607
HhaI	GCGC	2 cut(s)	597, 622
Hin6I	GCGC	2 cut(s)	595, 620
HinP1I	GCGC	2 cut(s)	595, 620
HincII	GTYRAC	2 cut(s)	1117, 1537
HindII	GTYRAC	2 cut(s)	1117, 1537
HinfI	GANTC	5 cut(s)	115, 459, 947, 1047, 1087
HpaII	CCGG	2 cut(s)	168, 1607
HphI	GGTGA	2 cut(s)	323, 1648
Hpy166II	GTNNAC	6 cut(s)	416, 766, 1117, 1195, 1529, 1537
Hpy188I	TCNGA	6 cut(s)	159, 164, 323, 952, 1252, 1389
Hpy188III	TCNNGA	8 cut(s)	196, 669, 830, 999, 1079, 1274, 1447, 1687
Hpy8I	GTNNAC	6 cut(s)	416, 766, 1117, 1195, 1529, 1537
HpyAV	CCTTC	6 cut(s)	517, 1153, 1178, 1544, 1711, 1781
HpyCH4III	ACNGT	9 cut(s)	359, 370, 454, 967, 1135, 1479, 1504, 1543, 1636
HpyCH4IV	ACGT	1 cut(s)	1821
HpyF10VI	GCNNNNNNNGC	9 cut(s)	53, 344, 477, 609, 626, 782, 1172, 1237, 1808
HpyF3I	CTNAG	1 cut(s)	561
HpySE526I	ACGT	1 cut(s)	1821
HspAI	GCGC	2 cut(s)	595, 620
Ksp22I	TGATCA	1 cut(s)	385
LmnI	GCTCC	6 cut(s)	53, 272, 291, 1237, 1574, 1807
Lsp1109I	GCAGC	5 cut(s)	17, 193, 604, 1173, 1654
LweI	GCATC	4 cut(s)	388, 801, 1132, 1734
MaeI	CTAG	5 cut(s)	174, 411, 419, 1232, 1259
MaeII	ACGT	1 cut(s)	1821
MaeIII	GTNAC	3 cut(s)	10, 63, 1648
MboII	GAAGA	6 cut(s)	454, 828, 924, 1016, 1651, 1805
MfeI	CAATTG	1 cut(s)	590
MflI	RGATCY	6 cut(s)	131, 159, 221, 542, 549, 1705
MlsI	TGGCCA	2 cut(s)	354, 858
MluCI	AATT	8 cut(s)	590, 643, 1019, 1056, 1277, 1291, 1391, 1690
MluNI	TGGCCA	2 cut(s)	354, 858
MlyI	GAGTC	1 cut(s)	109
MmeI	TCCRAC	1 cut(s)	250
Mox20I	TGGCCA	2 cut(s)	354, 858
Mph1103I	ATGCAT	1 cut(s)	403
MroXI	GAANNNNTTC	2 cut(s)	453, 1269
MscI	TGGCCA	2 cut(s)	354, 858
MseI	TTAA	5 cut(s)	737, 864, 1109, 1211, 1344
MslI	CAYNNNNRTG	1 cut(s)	48
Msp20I	TGGCCA	2 cut(s)	354, 858
MspA1I	CMGCKG	2 cut(s)	8, 1351
MspCI	CTTAAG	1 cut(s)	863
MspI	CCGG	2 cut(s)	168, 1607
MspR9I	CCNGG	8 cut(s)	614, 812, 855, 1331, 1368, 1714, 1757, 1779
MunI	CAATTG	1 cut(s)	590
Mva1269I	GAATGC	1 cut(s)	785
MvaI	CCWGG	8 cut(s)	614, 812, 855, 1331, 1368, 1714, 1757, 1779
MvnI	CGCG	1 cut(s)	480
MwoI	GCNNNNNNNGC	9 cut(s)	53, 344, 477, 609, 626, 782, 1172, 1237, 1808
NcoI	CCATGG	1 cut(s)	509
NlaIV	GGNNCC	7 cut(s)	104, 161, 515, 544, 630, 1722, 1771
NmuCI	GTSAC	2 cut(s)	10, 63
NsiI	ATGCAT	1 cut(s)	403
NspI	RCATGY	2 cut(s)	47, 1487
NspV	TTCGAA	1 cut(s)	837
PaeI	GCATGC	1 cut(s)	1487
PagI	TCATGA	1 cut(s)	195
PctI	GAATGC	1 cut(s)	785
PdmI	GAANNNNTTC	2 cut(s)	453, 1269
PfeI	GAWTC	4 cut(s)	459, 947, 1047, 1087
PflFI	GACNNNGTC	2 cut(s)	370, 1541
PflMI	CCANNNNNTGG	1 cut(s)	1734
PfoI	TCCNGGA	1 cut(s)	1712
PinAI	ACCGGT	1 cut(s)	167
PkrI	GCNGC	6 cut(s)	7, 208, 346, 619, 1188, 1669
PleI	GAGTC	1 cut(s)	109
PpsI	GAGTC	1 cut(s)	109
PshBI	ATTAAT	1 cut(s)	1211
Psp1406I	AACGTT	1 cut(s)	1821
Psp6I	CCWGG	8 cut(s)	612, 810, 853, 1329, 1366, 1712, 1755, 1777
PspGI	CCWGG	8 cut(s)	612, 810, 853, 1329, 1366, 1712, 1755, 1777
PspN4I	GGNNCC	7 cut(s)	104, 161, 515, 544, 630, 1722, 1771
PspPI	GGNCC	5 cut(s)	170, 284, 557, 671, 1165
PsuI	RGATCY	6 cut(s)	131, 159, 221, 542, 549, 1705
PsyI	GACNNNGTC	2 cut(s)	370, 1541
PvuII	CAGCTG	2 cut(s)	8, 1351
RsaI	GTAC	6 cut(s)	30, 417, 1137, 1328, 1617, 1663
RsaNI	GTAC	6 cut(s)	29, 416, 1136, 1327, 1616, 1662
RseI	CAYNNNNRTG	1 cut(s)	48
Rsr2I	CGGWCCG	1 cut(s)	284
RsrII	CGGWCCG	1 cut(s)	284
SalI	GTCGAC	1 cut(s)	1535
SaqAI	TTAA	5 cut(s)	737, 864, 1109, 1211, 1344
SatI	GCNGC	6 cut(s)	6, 207, 345, 618, 1187, 1668
Sau96I	GGNCC	5 cut(s)	170, 284, 557, 671, 1165
ScaI	AGTACT	1 cut(s)	1137
SchI	GAGTC	1 cut(s)	109
ScrFI	CCNGG	8 cut(s)	614, 812, 855, 1331, 1368, 1714, 1757, 1779
SfaNI	GCATC	4 cut(s)	388, 801, 1132, 1734
SfcI	CTRYAG	1 cut(s)	1377
SfuI	TTCGAA	1 cut(s)	837
SinI	GGWCC	3 cut(s)	170, 284, 671
SmiMI	CAYNNNNRTG	1 cut(s)	48
SmlI	CTYRAG	2 cut(s)	518, 863
SmoI	CTYRAG	2 cut(s)	518, 863
SpeI	ACTAGT	2 cut(s)	410, 418
SphI	GCATGC	1 cut(s)	1487
Sse9I	AATT	8 cut(s)	590, 643, 1019, 1056, 1277, 1291, 1391, 1690
SsiI	CCGC	3 cut(s)	243, 344, 480
SspMI	CTAG	5 cut(s)	174, 411, 419, 1232, 1259
StyD4I	CCNGG	8 cut(s)	612, 810, 853, 1329, 1366, 1712, 1755, 1777
StyI	CCWWGG	4 cut(s)	509, 777, 1309, 1812
TaaI	ACNGT	9 cut(s)	359, 370, 454, 967, 1135, 1479, 1504, 1543, 1636
TaiI	ACGT	1 cut(s)	1824
TaqI	TCGA	4 cut(s)	457, 837, 876, 1536
TaqII	GACCGA	1 cut(s)	272
TasI	AATT	8 cut(s)	590, 643, 1019, 1056, 1277, 1291, 1391, 1690
TatI	WGTACW	3 cut(s)	415, 1135, 1615
TauI	GCSGC	1 cut(s)	347
TfiI	GAWTC	4 cut(s)	459, 947, 1047, 1087
Tru1I	TTAA	5 cut(s)	737, 864, 1109, 1211, 1344
Tru9I	TTAA	5 cut(s)	737, 864, 1109, 1211, 1344
TscAI	CASTG	5 cut(s)	473, 721, 1057, 1197, 1546
TseFI	GTSAC	2 cut(s)	10, 63
TseI	GCWGC	5 cut(s)	5, 206, 617, 1186, 1667
Tsp45I	GTSAC	2 cut(s)	10, 63
TspDTI	ATGAA	7 cut(s)	269, 685, 871, 944, 1140, 1210, 1688
TspGWI	ACGGA	1 cut(s)	276
TspRI	CASTG	5 cut(s)	473, 721, 1057, 1197, 1546
Tth111I	GACNNNGTC	2 cut(s)	370, 1541
Van91I	CCANNNNNTGG	1 cut(s)	1734
Vha464I	CTTAAG	1 cut(s)	863
VpaK11BI	GGWCC	3 cut(s)	170, 284, 671
VspI	ATTAAT	1 cut(s)	1211
XagI	CCTNNNNNAGG	3 cut(s)	521, 564, 906
XapI	RAATTY	2 cut(s)	1291, 1391
XceI	RCATGY	2 cut(s)	47, 1487
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1276, 1418
XmiI	GTMKAC	1 cut(s)	1536
XmnI	GAANNNNTTC	2 cut(s)	453, 1269
XspI	CTAG	5 cut(s)	174, 411, 419, 1232, 1259
ZrmI	AGTACT	1 cut(s)	1137
Zsp2I	ATGCAT	1 cut(s)	403

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.