Basic Information

Type: gene

Biological Identity

Species

malus_domestica

Chromosome

Chr14

Orthogroup ID

OG0002240

Physical Location & Seq

Genomic Coordinates Reverse (-)

22679629 .. 22683724

Gene Structure 4096 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

MD14G1138500.v1.1.491

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1755 bp

ATGGGTATGTGGAACCAACCCATGACTCACAACGGGCTAAGATCTTTGAGCAATTTGGATATGCTTAGGATGAAGATCCGTTCCAAAGCGGTTGCTAGGCAAGCCATGAGGAAATCTGAGAAGACTGAGAGTGATCGGTGTGTGGGGAACATTGTATGTGGGAATGGCATGAACTTGGTGTTTGTGGGGGCAGAAGTTGGTCCATGGAGCAAAACTGGTGGTCTTGGTGATGTTCTTGGAGGACTCCCACCGGCAATGGCGGCTAATGGGCACCGTGTTATGACGGTGTCTCCACGCTACGATCAGTACAAAGATGCATGGGACACTGGTGTACCAGTTGAGATAGAAGTTGGTGGTAGGGTTGAAACTGTTCGCTTCTTCCACTGCTACAAACGCGGAGTTGATCGTGTCTTTGTGGATCACCCATCGTTCCTTGAGAGAGTATGGGGCAAAACTGGATCCAAAATCTATGGCCCGAGTGCAGGAGAGGATTACAAGGACAACCAGTTTCGCTTCAGCTTGTTGTGCCAGGCTGCTTTGGAGGCACCAAGGGTTCTTAACTTGAACAGCAACAAATACTTCTCCGGACCGTATGGTGATGAAGTTGTATTCGTTGCTAATGATTGGCACACTGCTCTTCTTCCCTGCTACTTAAAAGCGATCTACAAACCGAAGGGGATTTACGAAAATGCGAAGGTTGTATTTTGCATCCACAACATAGCTTACCAGGGCAGATTTCCCATTTCGGATTTCTCAGTTCTTAATTTGCCCGAAAACCTTAAGGGTTCTTTCGACTTCATTGACGGGTATAACAAGCCTGTGAAAGGAAGAAAAATCAATTGGATGAAGGCCGGAATACTAGAGTCGGACAGAGTTGTAACTGTAAGCCCATTCTATGCACAAGAACTTGTTTCTGGAGAAGACAAAGGTGTGGAATTGGATAACATCATTCGCAAGACCGGCATCACTGGTATCGTGAATGGCATGGACATACAAGAGTGGAATCCGGCCACAGACAAGTACTTAGATACCAAATATGATAACACAACTGTACTGGATGCAAAGCCTCTGGTGAAGGAGGCTCTTCAAGCAGAAGTTGGGTTGCCAGTTGACAGGAACATCCCTGTGATCGGATTCATTGGTAGGCTAGAGGAGCAGAAAGGGTCGGATATTCTAGTAGAAGCTATCTCGAAATTTGTCGGGGAGGAGGACGTGCAGATAATAGTCCTTGGGACCGGAAAAAAGTACATGGAGACGCAGATAGAACAACTAGAAGTCAAATATCCGGGCAAGGCTGTAGGAGTTGCAAAATTCAATGTCTCGCTAGCCCATATGATCATTGGCGGTTCTGATTTTATGTTGGTCCCAAGTAGATTCGAACCCTGCGGCCTCATTCAGTTGCATGCTATGAGATATGGAACGGTGCCTATTGTTGCCTCAACTGGTGGACTAGTCGACACTGTCAAAGAAGGTTTTACTGGATTTCAAATGGGAGCTTTCAACGTCGAATGTGACGAAGTTGATCCAGCAGATGTAACTGCAATTGCCACTACTGTCAAAAGAGCTATTGCAACTTACGGTACTCCTGCGTTGAATGAGATGATCCAGAACTGCATGGCCCAAGATCTTTCGTGGAAGGGACCTTCAAAACAATGGGAAAAGCTGCTGTTGAGCCTGGAAGTTGGTGGCAACGAACAAGGCCTTGAAGGCGAAGAGATTGCTCCTCTTGCCAAGGAAAATATTGCCACTCCCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0000271 GO:0003674 GO:0003824 GO:0004373 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005975 GO:0005976 GO:0005982 GO:0006073 GO:0008150 GO:0008152 GO:0008194 GO:0009011 GO:0009058 GO:0009059 GO:0009250 GO:0009501 GO:0009507 GO:0009536 GO:0009569 GO:0009987 GO:0016051 GO:0016740 GO:0016757 GO:0016758 GO:0017076 GO:0019252 GO:0019863 GO:0019865 GO:0030554 GO:0032553 GO:0032555 GO:0032559 GO:0033692 GO:0034637 GO:0034645 GO:0035251 GO:0036094 GO:0043036 GO:0043167 GO:0043168 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043531 GO:0044042 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0044877 GO:0046527 GO:0071704 GO:0097159 GO:0097367 GO:1901265 GO:1901363 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00500 ko01100 ko01110 map00500 map01100 map01110

Pfam Domains

Protein Families

Glyco_transf_5 Glycos_transf_1

Protein Analysis

585

Amino Acids

64.3

Weight (kDa)

5.7

Isoelectric Point (pI)

30.08

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_transf_5	PF08323	59 - 319	1.2e-65	Starch synthase catalytic domain
GT4-conflict	PF20706	348 - 546	2.5e-10	Family 4 Glycosyltransferase in conflict systems
Glycos_transf_1	PF00534	374 - 496	1.4e-15	Glycosyl transferases group 1
Glyco_trans_1_4	PF13692	375 - 497	9.7e-15	Glycosyl transferases group 1

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002240)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G32900
fragaria_vesca	FvH4_5g10580 FvH4_5g10580 FvH4_5g10580 FvH4_5g10580 FvH4_5g10580 FvH4_5g10580 FvH4_7g17630 FvH4_7g17630 FvH4_7g17630 FvH4_7g17630
malus_domestica	MD06G1122100.v1.1 MD07G1159300.v1.1 MD14G1138500.v1.1
prunus_persica	Prupe.2G197400_v2.0.a1 Prupe.2G197400_v2.0.a1 Prupe.2G197400_v2.0.a1 Prupe.5G132800_v2.0.a1 Prupe.5G132800_v2.0.a1
pyrus_communis	pycom01g11240 pycom06g11320 pycom07g15590 pycom14g11360
rosa_chinensis	RchiOBHm_Chr1g0361061 RchiOBHm_Chr7g0187571
rosa_laevigata	RLG00000004770 RLG00000027751
rosa_multiflora	Rmu_co8027448.1_g000001 Rmu_sc0000677.1_g000001 Rmu_ssc0000110.1_g000020
rosa_roxburghii	Rroxscaffold_3G00267310 Rroxscaffold_4G00295460
rosa_rugosa	Rorug01G0285200 Rorug06G0482700
rosa_samantha	Rh1AG296600 Rh1BG260900 Rh1CG278200 Rh1DG290900 Rh7AG087600 Rh7BG088900 Rh7CG088100 Rh7DG089800
rosa_wichuraiana	Rw1G026200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB1I	GGYRCC	3 cut(s)	270, 544, 1423
AccI	GTMKAC	1 cut(s)	1455
AccII	CGCG	1 cut(s)	396
AccIII	TCCGGA	1 cut(s)	584
AciI	CCGC	5 cut(s)	89, 260, 396, 1344, 1386
AclWI	GGATC	6 cut(s)	70, 426, 453, 466, 1517, 1597
AcoI	YGGCCR	1 cut(s)	1008
AcsI	RAATTY	2 cut(s)	1193, 1310
AcuI	CTGAAG	1 cut(s)	499
AfaI	GTAC	6 cut(s)	308, 333, 1022, 1053, 1247, 1582
AfiI	CCNNNNNNNGG	3 cut(s)	482, 824, 1130
AflII	CTTAAG	1 cut(s)	779
AgsI	TTSAA	9 cut(s)	365, 565, 1088, 1315, 1487, 1501, 1594, 1647, 1706
AhlI	ACTAGT	1 cut(s)	1450
AjiI	CACGTC	1 cut(s)	1213
AjnI	CCWGG	3 cut(s)	528, 726, 1674
AjuI	GAANNNNNNNTTGG	2 cut(s)	823, 855
AluBI	AGCT	6 cut(s)	519, 722, 1184, 1496, 1565, 1663
AluI	AGCT	6 cut(s)	519, 722, 1184, 1496, 1565, 1663
Alw26I	GTCTC	3 cut(s)	294, 1247, 1324
AlwI	GGATC	6 cut(s)	70, 426, 453, 466, 1517, 1597
Ama87I	CYCGRG	1 cut(s)	475
Aor13HI	TCCGGA	1 cut(s)	584
AoxI	GGCC	6 cut(s)	472, 849, 1008, 1387, 1617, 1699
ApeKI	GCWGC	2 cut(s)	533, 1663
ApoI	RAATTY	2 cut(s)	1193, 1310
Asp700I	GAANNNNTTC	1 cut(s)	369
AspS9I	GGNCC	7 cut(s)	200, 473, 587, 1233, 1363, 1618, 1640
AsuC2I	CCSGG	1 cut(s)	1287
AsuHPI	GGTGA	4 cut(s)	239, 413, 608, 1084
AsuII	TTCGAA	1 cut(s)	1377
AsuNHI	GCTAGC	1 cut(s)	1324
AvaI	CYCGRG	1 cut(s)	475
AvaII	GGWCC	5 cut(s)	200, 587, 1233, 1363, 1640
BaeGI	GKGCMC	1 cut(s)	273
BaeI	ACNNNNGTAYC	2 cut(s)	315, 348
BamHI	GGATCC	1 cut(s)	458
BanI	GGYRCC	3 cut(s)	270, 544, 1423
BarI	GAAGNNNNNNTAC	2 cut(s)	665, 697
BbsI	GAAGAC	2 cut(s)	128, 927
BbvI	GCAGC	2 cut(s)	520, 1650
BccI	CCATC	1 cut(s)	433
BcgI	CGANNNNNNTGC	2 cut(s)	1700, 1734
BciT130I	CCWGG	3 cut(s)	530, 728, 1676
BclI	TGATCA	1 cut(s)	1335
BcnI	CCSGG	1 cut(s)	1287
BcoDI	GTCTC	3 cut(s)	294, 1247, 1324
BcuI	ACTAGT	1 cut(s)	1450
BfaI	CTAG	8 cut(s)	96, 860, 1148, 1175, 1271, 1325, 1451, 1753
BfmI	CTRYAG	1 cut(s)	1296
BfrI	CTTAAG	1 cut(s)	779
BglI	GCCNNNNNGGC	1 cut(s)	1707
BglII	AGATCT	2 cut(s)	41, 1624
BisI	GCNGC	4 cut(s)	261, 534, 1387, 1664
BlsI	GCNGC	4 cut(s)	262, 535, 1388, 1665
BmcAI	AGTACT	1 cut(s)	1022
Bme1390I	CCNGG	4 cut(s)	530, 728, 1287, 1676
Bme18I	GGWCC	5 cut(s)	200, 587, 1233, 1363, 1640
BmeT110I	CYCGRG	1 cut(s)	475
BmgBI	CACGTC	1 cut(s)	1213
BmgT120I	GGNCC	7 cut(s)	200, 473, 587, 1233, 1363, 1618, 1640
BmiI	GGNNCC	8 cut(s)	14, 272, 460, 546, 1234, 1365, 1425, 1641
BmrFI	CCNGG	4 cut(s)	530, 728, 1287, 1676
BmsI	GCATC	4 cut(s)	304, 717, 972, 1048
BmtI	GCTAGC	1 cut(s)	1328
BpiI	GAAGAC	2 cut(s)	128, 927
BpmI	CTGGAG	1 cut(s)	936
Bpu10I	CCTNAGC	1 cut(s)	65
Bpu14I	TTCGAA	1 cut(s)	1377
BpuEI	CTTGAG	1 cut(s)	455
BpuMI	CCSGG	1 cut(s)	1287
BsaBI	GATNNNNATC	1 cut(s)	74
BsaJI	CCNNGG	5 cut(s)	203, 548, 727, 1228, 1731
BsaWI	WCCGGW	2 cut(s)	584, 1235
BsaXI	ACNNNNNCTCC	2 cut(s)	274, 304
Bsc4I	CCNNNNNNNGG	3 cut(s)	482, 824, 1130
Bse118I	RCCGGY	2 cut(s)	250, 959
Bse3DI	GCAATG	1 cut(s)	261
Bse8I	GATNNNNATC	1 cut(s)	74
BseAI	TCCGGA	1 cut(s)	584
BseBI	CCWGG	3 cut(s)	530, 728, 1676
BseDI	CCNNGG	5 cut(s)	203, 548, 727, 1228, 1731
BseGI	GGATG	5 cut(s)	75, 708, 849, 1063, 1119
BseJI	GATNNNNATC	1 cut(s)	74
BseLI	CCNNNNNNNGG	3 cut(s)	482, 824, 1130
BseMI	GCAATG	1 cut(s)	261
BseMII	CTCAG	3 cut(s)	108, 117, 768
BseRI	GAGGAG	3 cut(s)	1166, 1220, 1713
BseSI	GKGCMC	1 cut(s)	273
BseXI	GCAGC	2 cut(s)	520, 1650
BsgI	GTGCAG	2 cut(s)	501, 1235
Bsh1236I	CGCG	1 cut(s)	396
BshFI	GGCC	6 cut(s)	474, 851, 1010, 1389, 1619, 1701
BshNI	GGYRCC	3 cut(s)	270, 544, 1423
BsiHKCI	CYCGRG	1 cut(s)	475
BsiSI	CCGG	7 cut(s)	251, 585, 852, 960, 1007, 1236, 1286
BslFI	GGGAC	4 cut(s)	335, 1246, 1349, 1653
BslI	CCNNNNNNNGG	3 cut(s)	482, 824, 1130
BsmAI	GTCTC	3 cut(s)	294, 1247, 1324
BsmBI	CGTCTC	1 cut(s)	1247
BsmFI	GGGAC	4 cut(s)	335, 1246, 1349, 1653
BsnI	GGCC	6 cut(s)	474, 851, 1010, 1389, 1619, 1701
BsoBI	CYCGRG	1 cut(s)	475
Bsp119I	TTCGAA	1 cut(s)	1377
Bsp1286I	GDGCHC	1 cut(s)	273
Bsp13I	TCCGGA	1 cut(s)	584
Bsp19I	CCATGG	1 cut(s)	203
BspACI	CCGC	5 cut(s)	89, 260, 396, 1344, 1386
BspANI	GGCC	6 cut(s)	474, 851, 1010, 1389, 1619, 1701
BspCNI	CTCAG	3 cut(s)	109, 118, 767
BspEI	TCCGGA	1 cut(s)	584
BspFNI	CGCG	1 cut(s)	396
BspLI	GGNNCC	8 cut(s)	14, 272, 460, 546, 1234, 1365, 1425, 1641
BspOI	GCTAGC	1 cut(s)	1328
BspPI	GGATC	6 cut(s)	70, 426, 453, 466, 1517, 1597
BspQI	GCTCTTC	2 cut(s)	642, 1089
BspT104I	TTCGAA	1 cut(s)	1377
BspT107I	GGYRCC	3 cut(s)	270, 544, 1423
BspTI	CTTAAG	1 cut(s)	779
BsrDI	GCAATG	1 cut(s)	261
BsrFI	RCCGGY	2 cut(s)	250, 959
BssAI	RCCGGY	2 cut(s)	250, 959
BssECI	CCNNGG	5 cut(s)	203, 548, 727, 1228, 1731
BssT1I	CCWWGG	4 cut(s)	203, 548, 1228, 1731
Bst2UI	CCWGG	3 cut(s)	530, 728, 1676
Bst6I	CTCTTC	3 cut(s)	642, 1089, 1707
BstAFI	CTTAAG	1 cut(s)	779
BstBI	TTCGAA	1 cut(s)	1377
BstC8I	GCNNGC	3 cut(s)	102, 1326, 1404
BstDEI	CTNAG	6 cut(s)	38, 65, 117, 126, 754, 1024
BstDSI	CCRYGG	1 cut(s)	203
BstENI	CCTNNNNNAGG	1 cut(s)	822
BstF5I	GGATG	5 cut(s)	75, 708, 849, 1063, 1119
BstFNI	CGCG	1 cut(s)	396
BstMAI	GTCTC	3 cut(s)	294, 1247, 1324
BstNI	CCWGG	3 cut(s)	530, 728, 1676
BstNSI	RCATGY	1 cut(s)	1406
BstSCI	CCNGG	4 cut(s)	528, 726, 1285, 1674
BstSFI	CTRYAG	1 cut(s)	1296
BstSLI	GKGCMC	1 cut(s)	273
BstUI	CGCG	1 cut(s)	396
BstV1I	GCAGC	2 cut(s)	520, 1650
BstV2I	GAAGAC	2 cut(s)	128, 927
BstX2I	RGATCY	4 cut(s)	41, 75, 458, 1624
BstYI	RGATCY	4 cut(s)	41, 75, 458, 1624
BsuRI	GGCC	6 cut(s)	474, 851, 1010, 1389, 1619, 1701
BtgI	CCRYGG	1 cut(s)	203
BtrI	CACGTC	1 cut(s)	1213
BtsCI	GGATG	5 cut(s)	75, 708, 849, 1063, 1119
BtsI	GCAGTG	2 cut(s)	382, 630
BtsIMutI	CAGTG	5 cut(s)	324, 382, 630, 966, 1458
Cac8I	GCNNGC	3 cut(s)	102, 1326, 1404
Cfr10I	RCCGGY	2 cut(s)	250, 959
Cfr13I	GGNCC	7 cut(s)	200, 473, 587, 1233, 1363, 1618, 1640
CpoI	CGGWCCG	1 cut(s)	587
CseI	GACGC	1 cut(s)	1264
Csp6I	GTAC	6 cut(s)	307, 332, 1021, 1052, 1246, 1581
CspCI	CAANNNNNGTGG	2 cut(s)	199, 234
CspI	CGGWCCG	1 cut(s)	587
CviAII	CATG	9 cut(s)	22, 106, 169, 204, 318, 985, 1249, 1403, 1615
CviQI	GTAC	6 cut(s)	307, 332, 1021, 1052, 1246, 1581
DdeI	CTNAG	6 cut(s)	38, 65, 117, 126, 754, 1024
EaeI	YGGCCR	1 cut(s)	1008
Eam1104I	CTCTTC	3 cut(s)	642, 1089, 1707
EarI	CTCTTC	3 cut(s)	642, 1089, 1707
Eco130I	CCWWGG	4 cut(s)	203, 548, 1228, 1731
Eco147I	AGGCCT	1 cut(s)	1701
Eco47I	GGWCC	5 cut(s)	200, 587, 1233, 1363, 1640
Eco57I	CTGAAG	1 cut(s)	499
Eco88I	CYCGRG	1 cut(s)	475
EcoNI	CCTNNNNNAGG	1 cut(s)	822
EcoO109I	RGGNCCY	1 cut(s)	1640
EcoRII	CCWGG	3 cut(s)	528, 726, 1674
EcoT14I	CCWWGG	4 cut(s)	203, 548, 1228, 1731
EcoT22I	ATGCAT	1 cut(s)	319
ErhI	CCWWGG	4 cut(s)	203, 548, 1228, 1731
Esp3I	CGTCTC	1 cut(s)	1247
FaeI	CATG	9 cut(s)	25, 109, 172, 207, 321, 988, 1252, 1406, 1618
FaqI	GGGAC	4 cut(s)	335, 1246, 1349, 1653
FatI	CATG	9 cut(s)	21, 105, 168, 203, 317, 984, 1248, 1402, 1614
FauNDI	CATATG	1 cut(s)	1332
FbaI	TGATCA	1 cut(s)	1335
FblI	GTMKAC	1 cut(s)	1455
Fnu4HI	GCNGC	4 cut(s)	261, 534, 1387, 1664
FokI	GGATG	5 cut(s)	82, 695, 856, 1070, 1106
Fsp4HI	GCNGC	4 cut(s)	261, 534, 1387, 1664
FspBI	CTAG	8 cut(s)	96, 860, 1148, 1175, 1271, 1325, 1451, 1753
GluI	GCNGC	4 cut(s)	261, 534, 1387, 1664
GsuI	CTGGAG	1 cut(s)	936
HaeIII	GGCC	6 cut(s)	474, 851, 1010, 1389, 1619, 1701
HapII	CCGG	7 cut(s)	251, 585, 852, 960, 1007, 1236, 1286
HgaI	GACGC	1 cut(s)	1264
Hin1II	CATG	9 cut(s)	25, 109, 172, 207, 321, 988, 1252, 1406, 1618
HincII	GTYRAC	2 cut(s)	1111, 1456
HindII	GTYRAC	2 cut(s)	1111, 1456
HinfI	GANTC	6 cut(s)	25, 243, 863, 1003, 1134, 1374
HpaII	CCGG	7 cut(s)	251, 585, 852, 960, 1007, 1236, 1286
HphI	GGTGA	4 cut(s)	239, 413, 608, 1084
Hpy166II	GTNNAC	4 cut(s)	332, 1111, 1448, 1456
Hpy188I	TCNGA	6 cut(s)	118, 748, 868, 1133, 1168, 1351
Hpy188III	TCNNGA	5 cut(s)	585, 915, 976, 1189, 1606
Hpy8I	GTNNAC	4 cut(s)	332, 1111, 1448, 1456
Hpy99I	CGWCG	1 cut(s)	1508
HpyAV	CCTTC	8 cut(s)	667, 688, 841, 1069, 1463, 1630, 1653, 1700
HpyCH4IV	ACGT	2 cut(s)	1212, 1503
HpyF3I	CTNAG	6 cut(s)	38, 65, 117, 126, 754, 1024
HpySE526I	ACGT	2 cut(s)	1212, 1503
Hsp92II	CATG	9 cut(s)	25, 109, 172, 207, 321, 988, 1252, 1406, 1618
Kpn2I	TCCGGA	1 cut(s)	584
Ksp22I	TGATCA	1 cut(s)	1335
LguI	GCTCTTC	2 cut(s)	642, 1089
LmnI	GCTCC	4 cut(s)	207, 1153, 1493, 1726
Lsp1109I	GCAGC	2 cut(s)	520, 1650
LweI	GCATC	4 cut(s)	304, 717, 972, 1048
MaeI	CTAG	8 cut(s)	96, 860, 1148, 1175, 1271, 1325, 1451, 1753
MaeII	ACGT	2 cut(s)	1212, 1503
MaeIII	GTNAC	3 cut(s)	877, 1511, 1534
MboII	GAAGA	9 cut(s)	85, 133, 370, 629, 632, 840, 932, 1076, 1724
MfeI	CAATTG	2 cut(s)	838, 1542
MflI	RGATCY	4 cut(s)	41, 75, 458, 1624
MhlI	GDGCHC	1 cut(s)	273
MluCI	AATT	7 cut(s)	52, 763, 838, 935, 1193, 1310, 1542
MlyI	GAGTC	3 cut(s)	19, 237, 872
MmeI	TCCRAC	2 cut(s)	846, 1146
Mph1103I	ATGCAT	1 cut(s)	319
MroI	TCCGGA	1 cut(s)	584
MroXI	GAANNNNTTC	1 cut(s)	369
MseI	TTAA	4 cut(s)	558, 653, 762, 780
MslI	CAYNNNNRTG	1 cut(s)	1124
MspCI	CTTAAG	1 cut(s)	779
MspI	CCGG	7 cut(s)	251, 585, 852, 960, 1007, 1236, 1286
MspR9I	CCNGG	4 cut(s)	530, 728, 1287, 1676
MunI	CAATTG	2 cut(s)	838, 1542
MvaI	CCWGG	3 cut(s)	530, 728, 1676
MvnI	CGCG	1 cut(s)	396
NciI	CCSGG	1 cut(s)	1287
NcoI	CCATGG	1 cut(s)	203
NdeI	CATATG	1 cut(s)	1332
NheI	GCTAGC	1 cut(s)	1324
NlaIII	CATG	9 cut(s)	25, 109, 172, 207, 321, 988, 1252, 1406, 1618
NlaIV	GGNNCC	8 cut(s)	14, 272, 460, 546, 1234, 1365, 1425, 1641
NmuCI	GTSAC	1 cut(s)	1511
NsiI	ATGCAT	1 cut(s)	319
NspI	RCATGY	1 cut(s)	1406
NspV	TTCGAA	1 cut(s)	1377
PaeI	GCATGC	1 cut(s)	1406
PceI	AGGCCT	1 cut(s)	1701
PciSI	GCTCTTC	2 cut(s)	642, 1089
PcsI	WCGNNNNNNNCGW	1 cut(s)	1512
PdmI	GAANNNNTTC	1 cut(s)	369
PfeI	GAWTC	3 cut(s)	1003, 1134, 1374
PflFI	GACNNNGTC	2 cut(s)	286, 1460
PkrI	GCNGC	4 cut(s)	262, 535, 1388, 1665
PleI	GAGTC	3 cut(s)	19, 237, 871
PpsI	GAGTC	3 cut(s)	19, 237, 871
PpuMI	RGGWCCY	1 cut(s)	1640
Psp5II	RGGWCCY	1 cut(s)	1640
Psp6I	CCWGG	3 cut(s)	528, 726, 1674
PspGI	CCWGG	3 cut(s)	528, 726, 1674
PspN4I	GGNNCC	8 cut(s)	14, 272, 460, 546, 1234, 1365, 1425, 1641
PspPI	GGNCC	7 cut(s)	200, 473, 587, 1233, 1363, 1618, 1640
PspPPI	RGGWCCY	1 cut(s)	1640
PsuI	RGATCY	4 cut(s)	41, 75, 458, 1624
PsyI	GACNNNGTC	2 cut(s)	286, 1460
RsaI	GTAC	6 cut(s)	308, 333, 1022, 1053, 1247, 1582
RsaNI	GTAC	6 cut(s)	307, 332, 1021, 1052, 1246, 1581
RseI	CAYNNNNRTG	1 cut(s)	1124
Rsr2I	CGGWCCG	1 cut(s)	587
RsrII	CGGWCCG	1 cut(s)	587
SalI	GTCGAC	1 cut(s)	1454
SapI	GCTCTTC	2 cut(s)	642, 1089
SaqAI	TTAA	4 cut(s)	558, 653, 762, 780
SatI	GCNGC	4 cut(s)	261, 534, 1387, 1664
Sau96I	GGNCC	7 cut(s)	200, 473, 587, 1233, 1363, 1618, 1640
ScaI	AGTACT	1 cut(s)	1022
SchI	GAGTC	3 cut(s)	19, 237, 872
ScrFI	CCNGG	4 cut(s)	530, 728, 1287, 1676
SduI	GDGCHC	1 cut(s)	273
SfaNI	GCATC	4 cut(s)	304, 717, 972, 1048
SfcI	CTRYAG	1 cut(s)	1296
SfuI	TTCGAA	1 cut(s)	1377
SinI	GGWCC	5 cut(s)	200, 587, 1233, 1363, 1640
SmiMI	CAYNNNNRTG	1 cut(s)	1124
SmlI	CTYRAG	2 cut(s)	434, 779
SmoI	CTYRAG	2 cut(s)	434, 779
SpeI	ACTAGT	1 cut(s)	1450
SphI	GCATGC	1 cut(s)	1406
Sse9I	AATT	7 cut(s)	52, 763, 838, 935, 1193, 1310, 1542
SseBI	AGGCCT	1 cut(s)	1701
SsiI	CCGC	5 cut(s)	89, 260, 396, 1344, 1386
SspI	AATATT	1 cut(s)	1741
SspMI	CTAG	8 cut(s)	96, 860, 1148, 1175, 1271, 1325, 1451, 1753
StuI	AGGCCT	1 cut(s)	1701
StyD4I	CCNGG	4 cut(s)	528, 726, 1285, 1674
StyI	CCWWGG	4 cut(s)	203, 548, 1228, 1731
TaiI	ACGT	2 cut(s)	1215, 1506
TaqI	TCGA	5 cut(s)	792, 1190, 1377, 1455, 1506
TasI	AATT	7 cut(s)	52, 763, 838, 935, 1193, 1310, 1542
TatI	WGTACW	4 cut(s)	306, 1020, 1051, 1245
TauI	GCSGC	2 cut(s)	263, 1389
TfiI	GAWTC	3 cut(s)	1003, 1134, 1374
Tru1I	TTAA	4 cut(s)	558, 653, 762, 780
Tru9I	TTAA	4 cut(s)	558, 653, 762, 780
TscAI	CASTG	5 cut(s)	331, 389, 637, 973, 1465
TseFI	GTSAC	1 cut(s)	1511
TseI	GCWGC	2 cut(s)	533, 1663
Tsp45I	GTSAC	1 cut(s)	1511
TspDTI	ATGAA	6 cut(s)	86, 185, 615, 787, 860, 1126
TspGWI	ACGGA	1 cut(s)	68
TspRI	CASTG	5 cut(s)	331, 389, 637, 973, 1465
Tth111I	GACNNNGTC	2 cut(s)	286, 1460
Vha464I	CTTAAG	1 cut(s)	779
VpaK11BI	GGWCC	5 cut(s)	200, 587, 1233, 1363, 1640
XagI	CCTNNNNNAGG	1 cut(s)	822
XapI	RAATTY	2 cut(s)	1193, 1310
XceI	RCATGY	1 cut(s)	1406
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1337
XmiI	GTMKAC	1 cut(s)	1455
XmnI	GAANNNNTTC	1 cut(s)	369
XspI	CTAG	8 cut(s)	96, 860, 1148, 1175, 1271, 1325, 1451, 1753
ZrmI	AGTACT	1 cut(s)	1022
Zsp2I	ATGCAT	1 cut(s)	319

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.