Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr1

Orthogroup ID

OG0002240

Physical Location & Seq

Genomic Coordinates Forward (+)

62132832 .. 62136722

Gene Structure 3891 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000004770

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1914 bp

ATGTCGCACGATGTGAAATTCAATGCAACCCCACCTGATATGTACACCCGGCCAACCGCCACAGCAAGGATTTCGGTGATGGCAGCTGTGACAACCTCATACTATGTACCTAGCACTTCACATGCTAATGGAGCTTCAGGGTCACAAACCAGGACAAACTTGGGACAGATGGGTCTGTGGAACCAACCCATGACTCACAATGGGTTGAGATCTTTGAGCAACTTGGATATGCTTCGAATCCGAACCCCTCCTAGTGCATATTCCATGCAAGTCATGAGAAAGGCTGCGAGTGATATTGGATCTGTGGGGAGGATTGTCTGTGGTCAAGGAATGAACTTGGTCTTTGTTGGAGCTGAAGTCGGTCCGTGGAGCAAAACTGGTGGTCTTGGTGATGTTCTCGGAGGTCTCCCACCAGCTATGGCGGCTAATGGCCACCGTGTTATGACGGTGTCTCCTCGCTATGATCAATACAAAGATGCATGGGACACTAATGTACTAGTTGAGACAGAAGTTGGTGGCAGAGTTGAAACTGTTCGATTCTTCCACTGCTACAAACGCGGAGTTGATCGTGTATTTGTGGATCATCCATGGTTCCTTGAGAAGGTATGGGGTAAAACAGGATCCAAGATCTATGGGCCTAAGACAGGAGTGGATTACAAGGACAACCAATTGCGCTTCAGCTTGTTGTGCCAGGCTGCACTGGAGGCACCGAGGGTTCTCAATTTGAACAGCAACGAATTTTTCTCTGGACCTTATGGAGAGGATGTTGTGTTCATTTGCAATGACTGGCACACTGCTCTTGTTCCTTGCTACTTAAAAACCATCTACAAACCAATGGGAGTTTACACAAGTGCCAAGGTTGCATTCTGCATCCACAATATAGCTTACCAGGGAAGATTTCCTATTCAGGACTTCGAACTCCTTGATTTACCTGGCCAACTTAAGGGTTCTTTCGACTTCATTGACGGGTATAACAAGCCTGTGAAAGGAAGAAAAATCAACTGGATGAAAGCTGGAATACTGGAATCGGACAGGGTTATTACTGTAAGCCCTTACTATGCACAGGAACTTATTTCTGGAGAAGACAAAGGTGTGGAATTAGATAACATTATTCGTAAGACTGGAATCACTGGAATTGTGAATGGCATGGATGTTCAAGAGTGGAATCCAGCAACAGACAAATACTTAAATGTCAACTATGATAAAACAACAGTACTGGATGCAAAGCCTCTTTTGAAGGAGGCCCTTCAAGCCGAAGTTGGGCTGCCAGTGGACAGGGACATCCCATTAATAGGCTTCATTGGTAGGCTAGAGGAGCAGAAAGGTTCAGATATTCTAGTGGAAGCCATTCCAGAATTGGCAGGAGAGAATTTGCAAATAATAGTCCTTGGAACTGGCAAAAAGTACCTGGAGGAGCAGATTAAACAGCTGGAGACAAAATATCCGGGCATGGCTGTAGGCGTGCTGAAATTCAATGTTCCATTAGCCCACATGATTATTGGTGGTGCTGATTTTATGTTGATCCCGAGTAGATTTGAACCATGTGGTCTCATACAGTTGCATGCCATGAGATATGGAACAGTTCCCATTGTTGCTTCAACTGGTGGACTAGTCGACACTGTCAAGGAAGGTTTTACAGGATTTCATATGGGAGCTTTCAATGTTGATTGCGAAGCAGTTGATCCGGCAGATGTACTTGCAACATCTACTACGGTGAAGAGAGCTGTTGCAAGCTATGGTACTGCTGCCATGAAAGAAATGATCCAGAATTGCATGGCAAAAGATCTTTCCTGGAAGGAACCTTCCAAACAATGGGAAAAGATGCTGTTGAGCCTGGAAGTTGCTGGCGCCGAACCTGGCTTTGAAGGGGAAGAGATTGCTCCTCTTGCCAAGGAAAACGTTGCCACCCCCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0000271 GO:0003674 GO:0003824 GO:0004373 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005975 GO:0005976 GO:0005982 GO:0006073 GO:0008150 GO:0008152 GO:0008194 GO:0009011 GO:0009058 GO:0009059 GO:0009250 GO:0009501 GO:0009507 GO:0009536 GO:0009569 GO:0009987 GO:0016051 GO:0016740 GO:0016757 GO:0016758 GO:0017076 GO:0019252 GO:0019863 GO:0019865 GO:0030554 GO:0032553 GO:0032555 GO:0032559 GO:0033692 GO:0034637 GO:0034645 GO:0035251 GO:0036094 GO:0043036 GO:0043167 GO:0043168 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043531 GO:0044042 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044422 GO:0044424 GO:0044434 GO:0044435 GO:0044444 GO:0044446 GO:0044464 GO:0044877 GO:0046527 GO:0071704 GO:0097159 GO:0097367 GO:1901265 GO:1901363 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00500 ko01100 ko01110 map00500 map01100 map01110

Pfam Domains

Protein Families

Glyco_transf_5 Glycos_transf_1

Protein Analysis

638

Amino Acids

69.91

Weight (kDa)

5.96

Isoelectric Point (pI)

23.48

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_transf_5	PF08323	113 - 373	4.3e-66	Starch synthase catalytic domain
GT4-conflict	PF20706	402 - 600	4.4e-09	Family 4 Glycosyltransferase in conflict systems
Glycos_transf_1	PF00534	427 - 554	1e-16	Glycosyl transferases group 1
Glyco_trans_1_4	PF13692	429 - 550	3.3e-15	Glycosyl transferases group 1

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002240)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G32900
fragaria_vesca	FvH4_5g10580 FvH4_5g10580 FvH4_5g10580 FvH4_5g10580 FvH4_5g10580 FvH4_5g10580 FvH4_7g17630 FvH4_7g17630 FvH4_7g17630 FvH4_7g17630
malus_domestica	MD06G1122100.v1.1 MD07G1159300.v1.1 MD14G1138500.v1.1
prunus_persica	Prupe.2G197400_v2.0.a1 Prupe.2G197400_v2.0.a1 Prupe.2G197400_v2.0.a1 Prupe.5G132800_v2.0.a1 Prupe.5G132800_v2.0.a1
pyrus_communis	pycom01g11240 pycom06g11320 pycom07g15590 pycom14g11360
rosa_chinensis	RchiOBHm_Chr1g0361061 RchiOBHm_Chr7g0187571
rosa_laevigata	RLG00000004770 RLG00000027751
rosa_multiflora	Rmu_co8027448.1_g000001 Rmu_sc0000677.1_g000001 Rmu_ssc0000110.1_g000020
rosa_roxburghii	Rroxscaffold_3G00267310 Rroxscaffold_4G00295460
rosa_rugosa	Rorug01G0285200 Rorug06G0482700
rosa_samantha	Rh1AG296600 Rh1BG260900 Rh1CG278200 Rh1DG290900 Rh7AG087600 Rh7BG088900 Rh7CG088100 Rh7DG089800
rosa_wichuraiana	Rw1G026200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	171
AccB1I	GGYRCC	2 cut(s)	706, 1847
AccB7I	CCANNNNNTGG	1 cut(s)	1812
AccI	GTMKAC	1 cut(s)	1614
AccII	CGCG	1 cut(s)	558
AciI	CCGC	3 cut(s)	57, 422, 558
AclI	AACGTT	1 cut(s)	1899
AclWI	GGATC	7 cut(s)	307, 588, 615, 628, 1516, 1676, 1756
AcoI	YGGCCR	3 cut(s)	50, 430, 934
AcsI	RAATTY	4 cut(s)	17, 737, 1369, 1469
AcuI	CTGAAG	3 cut(s)	120, 375, 661
AcyI	GRCGYC	1 cut(s)	1848
AdeI	CACNNNGTG	1 cut(s)	13
AfaI	GTAC	7 cut(s)	44, 108, 495, 1215, 1406, 1695, 1741
AfiI	CCNNNNNNNGG	8 cut(s)	66, 601, 644, 943, 986, 1260, 1292, 1812
AflII	CTTAAG	1 cut(s)	941
AhlI	ACTAGT	2 cut(s)	496, 1609
AjnI	CCWGG	8 cut(s)	149, 690, 888, 931, 1407, 1790, 1833, 1855
AjuI	GAANNNNNNNTTGG	2 cut(s)	848, 880
AloI	GAACNNNNNNTCC	2 cut(s)	755, 787
Alw26I	GTCTC	5 cut(s)	410, 456, 497, 1427, 1553
AlwI	GGATC	7 cut(s)	307, 588, 615, 628, 1516, 1676, 1756
Ama87I	CYCGRG	1 cut(s)	1525
AoxI	GGCC	5 cut(s)	50, 430, 635, 934, 1242
ApeKI	GCWGC	5 cut(s)	83, 284, 695, 1264, 1745
ApoI	RAATTY	4 cut(s)	17, 737, 1369, 1469
AseI	ATTAAT	1 cut(s)	1289
Asp700I	GAANNNNTTC	2 cut(s)	531, 1347
AspLEI	GCGC	2 cut(s)	675, 1850
AspS9I	GGNCC	4 cut(s)	362, 635, 749, 1243
AsuC2I	CCSGG	2 cut(s)	49, 1446
AsuHPI	GGTGA	3 cut(s)	88, 401, 1726
AsuII	TTCGAA	2 cut(s)	235, 915
AvaI	CYCGRG	1 cut(s)	1525
AvaII	GGWCC	2 cut(s)	362, 749
BalI	TGGCCA	2 cut(s)	432, 936
BamHI	GGATCC	1 cut(s)	620
BanI	GGYRCC	2 cut(s)	706, 1847
BbsI	GAAGAC	1 cut(s)	1089
BbvI	GCAGC	5 cut(s)	95, 271, 682, 1251, 1732
BccI	CCATC	3 cut(s)	73, 163, 830
BcgI	CGANNNNNNTGC	2 cut(s)	54, 88
BciT130I	CCWGG	8 cut(s)	151, 692, 890, 933, 1409, 1792, 1835, 1857
BclI	TGATCA	1 cut(s)	463
BcnI	CCSGG	2 cut(s)	49, 1446
BcoDI	GTCTC	5 cut(s)	410, 456, 497, 1427, 1553
BcuI	ACTAGT	2 cut(s)	496, 1609
BfaI	CTAG	6 cut(s)	111, 252, 497, 1310, 1337, 1610
BfmI	CTRYAG	1 cut(s)	1455
BfoI	RGCGCY	1 cut(s)	1851
BfrI	CTTAAG	1 cut(s)	941
BglII	AGATCT	3 cut(s)	209, 627, 1783
BisI	GCNGC	6 cut(s)	84, 285, 423, 696, 1265, 1746
BlsI	GCNGC	6 cut(s)	85, 286, 424, 697, 1266, 1747
BmcAI	AGTACT	1 cut(s)	1215
Bme18I	GGWCC	2 cut(s)	362, 749
BmeT110I	CYCGRG	1 cut(s)	1525
BmgT120I	GGNCC	4 cut(s)	362, 635, 749, 1243
BmiI	GGNNCC	6 cut(s)	182, 593, 622, 708, 1800, 1849
BmsI	GCATC	4 cut(s)	466, 879, 1210, 1812
BpiI	GAAGAC	1 cut(s)	1089
BpmI	CTGGAG	4 cut(s)	722, 1098, 1430, 1451
Bpu14I	TTCGAA	2 cut(s)	235, 915
BpuEI	CTTGAG	1 cut(s)	617
BpuMI	CCSGG	2 cut(s)	49, 1446
BsaHI	GRCGYC	1 cut(s)	1848
BsaI	GGTCTC	2 cut(s)	410, 1553
BsaJI	CCNNGG	7 cut(s)	365, 587, 710, 855, 889, 1387, 1890
BsaXI	ACNNNNNCTCC	6 cut(s)	342, 372, 436, 466, 750, 780
Bsc4I	CCNNNNNNNGG	8 cut(s)	66, 601, 644, 943, 986, 1260, 1292, 1812
Bse3DI	GCAATG	1 cut(s)	787
BseBI	CCWGG	8 cut(s)	151, 692, 890, 933, 1409, 1792, 1835, 1857
BseDI	CCNNGG	7 cut(s)	365, 587, 710, 855, 889, 1387, 1890
BseGI	GGATG	7 cut(s)	583, 769, 870, 1011, 1156, 1225, 1281
BseLI	CCNNNNNNNGG	8 cut(s)	66, 601, 644, 943, 986, 1260, 1292, 1812
BseMI	GCAATG	1 cut(s)	787
BseRI	GAGGAG	4 cut(s)	444, 1328, 1427, 1872
BseXI	GCAGC	5 cut(s)	95, 271, 682, 1251, 1732
BsgI	GTGCAG	1 cut(s)	681
Bsh1236I	CGCG	1 cut(s)	558
BshFI	GGCC	5 cut(s)	52, 432, 637, 936, 1244
BshNI	GGYRCC	2 cut(s)	706, 1847
BsiHKCI	CYCGRG	1 cut(s)	1525
BsiSI	CCGG	3 cut(s)	49, 1445, 1685
BslFI	GGGAC	3 cut(s)	177, 497, 1292
BslI	CCNNNNNNNGG	8 cut(s)	66, 601, 644, 943, 986, 1260, 1292, 1812
BsmAI	GTCTC	5 cut(s)	410, 456, 497, 1427, 1553
BsmFI	GGGAC	3 cut(s)	177, 497, 1292
BsmI	GAATGC	1 cut(s)	863
BsnI	GGCC	5 cut(s)	52, 432, 637, 936, 1244
Bso31I	GGTCTC	2 cut(s)	410, 1553
BsoBI	CYCGRG	1 cut(s)	1525
Bsp119I	TTCGAA	2 cut(s)	235, 915
Bsp1407I	TGTACA	1 cut(s)	42
Bsp19I	CCATGG	1 cut(s)	587
BspACI	CCGC	3 cut(s)	57, 422, 558
BspANI	GGCC	5 cut(s)	52, 432, 637, 936, 1244
BspFNI	CGCG	1 cut(s)	558
BspHI	TCATGA	1 cut(s)	273
BspLI	GGNNCC	6 cut(s)	182, 593, 622, 708, 1800, 1849
BspPI	GGATC	7 cut(s)	307, 588, 615, 628, 1516, 1676, 1756
BspT104I	TTCGAA	2 cut(s)	235, 915
BspT107I	GGYRCC	2 cut(s)	706, 1847
BspTI	CTTAAG	1 cut(s)	941
BspTNI	GGTCTC	2 cut(s)	410, 1553
BsrDI	GCAATG	1 cut(s)	787
BsrGI	TGTACA	1 cut(s)	42
BssECI	CCNNGG	7 cut(s)	365, 587, 710, 855, 889, 1387, 1890
BssNI	GRCGYC	1 cut(s)	1848
BssT1I	CCWWGG	4 cut(s)	587, 855, 1387, 1890
Bst2UI	CCWGG	8 cut(s)	151, 692, 890, 933, 1409, 1792, 1835, 1857
Bst4CI	ACNGT	9 cut(s)	437, 448, 532, 1045, 1213, 1557, 1582, 1621, 1714
Bst6I	CTCTTC	2 cut(s)	1712, 1866
BstACI	GRCGYC	1 cut(s)	1848
BstAFI	CTTAAG	1 cut(s)	941
BstAUI	TGTACA	1 cut(s)	42
BstBI	TTCGAA	2 cut(s)	235, 915
BstC8I	GCNNGC	4 cut(s)	1463, 1563, 1732, 1846
BstDEI	CTNAG	1 cut(s)	639
BstDSI	CCRYGG	2 cut(s)	365, 587
BstENI	CCTNNNNNAGG	3 cut(s)	599, 642, 984
BstF5I	GGATG	7 cut(s)	583, 769, 870, 1011, 1156, 1225, 1281
BstFNI	CGCG	1 cut(s)	558
BstH2I	RGCGCY	1 cut(s)	1851
BstHHI	GCGC	2 cut(s)	675, 1850
BstMAI	GTCTC	5 cut(s)	410, 456, 497, 1427, 1553
BstMWI	GCNNNNNNNGC	9 cut(s)	131, 422, 555, 687, 704, 860, 1250, 1315, 1886
BstNI	CCWGG	8 cut(s)	151, 692, 890, 933, 1409, 1792, 1835, 1857
BstNSI	RCATGY	2 cut(s)	125, 1565
BstSFI	CTRYAG	1 cut(s)	1455
BstUI	CGCG	1 cut(s)	558
BstV1I	GCAGC	5 cut(s)	95, 271, 682, 1251, 1732
BstV2I	GAAGAC	1 cut(s)	1089
BstX2I	RGATCY	5 cut(s)	209, 299, 620, 627, 1783
BstYI	RGATCY	5 cut(s)	209, 299, 620, 627, 1783
BsuRI	GGCC	5 cut(s)	52, 432, 637, 936, 1244
BtgI	CCRYGG	2 cut(s)	365, 587
BtsCI	GGATG	7 cut(s)	583, 769, 870, 1011, 1156, 1225, 1281
BtsI	GCAGTG	2 cut(s)	544, 792
BtsIMutI	CAGTG	6 cut(s)	544, 698, 792, 1128, 1275, 1617
Cac8I	GCNNGC	4 cut(s)	1463, 1563, 1732, 1846
CciI	TCATGA	1 cut(s)	273
CfoI	GCGC	2 cut(s)	675, 1850
Cfr13I	GGNCC	4 cut(s)	362, 635, 749, 1243
CpoI	CGGWCCG	1 cut(s)	362
Csp6I	GTAC	7 cut(s)	43, 107, 494, 1214, 1405, 1694, 1740
CspCI	CAANNNNNGTGG	2 cut(s)	361, 396
CspI	CGGWCCG	1 cut(s)	362
CviQI	GTAC	7 cut(s)	43, 107, 494, 1214, 1405, 1694, 1740
DdeI	CTNAG	1 cut(s)	639
DinI	GGCGCC	1 cut(s)	1849
DraIII	CACNNNGTG	1 cut(s)	13
DrdI	GACNNNNNNGTC	1 cut(s)	171
DseDI	GACNNNNNNGTC	1 cut(s)	171
EaeI	YGGCCR	3 cut(s)	50, 430, 934
Eam1104I	CTCTTC	2 cut(s)	1712, 1866
EarI	CTCTTC	2 cut(s)	1712, 1866
Eco130I	CCWWGG	4 cut(s)	587, 855, 1387, 1890
Eco31I	GGTCTC	2 cut(s)	410, 1553
Eco47I	GGWCC	2 cut(s)	362, 749
Eco57I	CTGAAG	3 cut(s)	120, 375, 661
Eco88I	CYCGRG	1 cut(s)	1525
EcoNI	CCTNNNNNAGG	3 cut(s)	599, 642, 984
EcoO109I	RGGNCCY	1 cut(s)	1243
EcoRII	CCWGG	8 cut(s)	149, 690, 888, 931, 1407, 1790, 1833, 1855
EcoT14I	CCWWGG	4 cut(s)	587, 855, 1387, 1890
EcoT22I	ATGCAT	1 cut(s)	481
EgeI	GGCGCC	1 cut(s)	1849
EheI	GGCGCC	1 cut(s)	1849
ErhI	CCWWGG	4 cut(s)	587, 855, 1387, 1890
FaqI	GGGAC	3 cut(s)	177, 497, 1292
FauNDI	CATATG	1 cut(s)	1647
FbaI	TGATCA	1 cut(s)	463
FblI	GTMKAC	1 cut(s)	1614
Fnu4HI	GCNGC	6 cut(s)	84, 285, 423, 696, 1265, 1746
FokI	GGATG	7 cut(s)	570, 776, 857, 1018, 1163, 1232, 1268
Fsp4HI	GCNGC	6 cut(s)	84, 285, 423, 696, 1265, 1746
FspBI	CTAG	6 cut(s)	111, 252, 497, 1310, 1337, 1610
GlaI	GCGC	2 cut(s)	674, 1849
GluI	GCNGC	6 cut(s)	84, 285, 423, 696, 1265, 1746
GsuI	CTGGAG	4 cut(s)	722, 1098, 1430, 1451
HaeII	RGCGCY	1 cut(s)	1851
HaeIII	GGCC	5 cut(s)	52, 432, 637, 936, 1244
HapII	CCGG	3 cut(s)	49, 1445, 1685
HhaI	GCGC	2 cut(s)	675, 1850
Hin1I	GRCGYC	1 cut(s)	1848
Hin6I	GCGC	2 cut(s)	673, 1848
HinP1I	GCGC	2 cut(s)	673, 1848
HincII	GTYRAC	2 cut(s)	1195, 1615
HindII	GTYRAC	2 cut(s)	1195, 1615
HinfI	GANTC	6 cut(s)	193, 237, 537, 1025, 1125, 1165
HpaII	CCGG	3 cut(s)	49, 1445, 1685
HphI	GGTGA	3 cut(s)	88, 401, 1726
Hpy166II	GTNNAC	6 cut(s)	45, 844, 1195, 1273, 1607, 1615
Hpy188I	TCNGA	4 cut(s)	242, 401, 1030, 1330
Hpy188III	TCNNGA	8 cut(s)	274, 747, 908, 1077, 1157, 1352, 1525, 1765
Hpy8I	GTNNAC	6 cut(s)	45, 844, 1195, 1273, 1607, 1615
HpyAV	CCTTC	7 cut(s)	595, 1231, 1256, 1622, 1789, 1812, 1859
HpyCH4III	ACNGT	9 cut(s)	437, 448, 532, 1045, 1213, 1557, 1582, 1621, 1714
HpyCH4IV	ACGT	1 cut(s)	1899
HpyF10VI	GCNNNNNNNGC	9 cut(s)	131, 422, 555, 687, 704, 860, 1250, 1315, 1886
HpyF3I	CTNAG	1 cut(s)	639
HpySE526I	ACGT	1 cut(s)	1899
Hsp92I	GRCGYC	1 cut(s)	1848
HspAI	GCGC	2 cut(s)	673, 1848
KasI	GGCGCC	1 cut(s)	1847
Ksp22I	TGATCA	1 cut(s)	463
LmnI	GCTCC	7 cut(s)	131, 350, 369, 1315, 1414, 1652, 1885
Lsp1109I	GCAGC	5 cut(s)	95, 271, 682, 1251, 1732
LweI	GCATC	4 cut(s)	466, 879, 1210, 1812
MaeI	CTAG	6 cut(s)	111, 252, 497, 1310, 1337, 1610
MaeII	ACGT	1 cut(s)	1899
MaeIII	GTNAC	2 cut(s)	88, 141
MboII	GAAGA	6 cut(s)	532, 906, 1002, 1094, 1729, 1883
MfeI	CAATTG	1 cut(s)	668
MflI	RGATCY	5 cut(s)	209, 299, 620, 627, 1783
MlsI	TGGCCA	2 cut(s)	432, 936
MluNI	TGGCCA	2 cut(s)	432, 936
Mly113I	GGCGCC	1 cut(s)	1848
MlyI	GAGTC	1 cut(s)	187
MmeI	TCCRAC	1 cut(s)	328
Mox20I	TGGCCA	2 cut(s)	432, 936
Mph1103I	ATGCAT	1 cut(s)	481
MroXI	GAANNNNTTC	2 cut(s)	531, 1347
MscI	TGGCCA	2 cut(s)	432, 936
MseI	TTAA	5 cut(s)	815, 942, 1187, 1289, 1422
MslI	CAYNNNNRTG	1 cut(s)	126
Msp20I	TGGCCA	2 cut(s)	432, 936
MspA1I	CMGCKG	2 cut(s)	86, 1429
MspCI	CTTAAG	1 cut(s)	941
MspI	CCGG	3 cut(s)	49, 1445, 1685
MunI	CAATTG	1 cut(s)	668
Mva1269I	GAATGC	1 cut(s)	863
MvaI	CCWGG	8 cut(s)	151, 692, 890, 933, 1409, 1792, 1835, 1857
MvnI	CGCG	1 cut(s)	558
MwoI	GCNNNNNNNGC	9 cut(s)	131, 422, 555, 687, 704, 860, 1250, 1315, 1886
NarI	GGCGCC	1 cut(s)	1848
NciI	CCSGG	2 cut(s)	49, 1446
NcoI	CCATGG	1 cut(s)	587
NdeI	CATATG	1 cut(s)	1647
NlaIV	GGNNCC	6 cut(s)	182, 593, 622, 708, 1800, 1849
NmuCI	GTSAC	2 cut(s)	88, 141
NsiI	ATGCAT	1 cut(s)	481
NspI	RCATGY	2 cut(s)	125, 1565
NspV	TTCGAA	2 cut(s)	235, 915
PaeI	GCATGC	1 cut(s)	1565
PagI	TCATGA	1 cut(s)	273
PctI	GAATGC	1 cut(s)	863
PdmI	GAANNNNTTC	2 cut(s)	531, 1347
PfeI	GAWTC	5 cut(s)	237, 537, 1025, 1125, 1165
PflFI	GACNNNGTC	2 cut(s)	448, 1619
PflMI	CCANNNNNTGG	1 cut(s)	1812
PfoI	TCCNGGA	1 cut(s)	1790
PkrI	GCNGC	6 cut(s)	85, 286, 424, 697, 1266, 1747
PleI	GAGTC	1 cut(s)	187
PluTI	GGCGCC	1 cut(s)	1851
PpsI	GAGTC	1 cut(s)	187
PshBI	ATTAAT	1 cut(s)	1289
Psp1406I	AACGTT	1 cut(s)	1899
Psp6I	CCWGG	8 cut(s)	149, 690, 888, 931, 1407, 1790, 1833, 1855
PspGI	CCWGG	8 cut(s)	149, 690, 888, 931, 1407, 1790, 1833, 1855
PspN4I	GGNNCC	6 cut(s)	182, 593, 622, 708, 1800, 1849
PspPI	GGNCC	4 cut(s)	362, 635, 749, 1243
PsuI	RGATCY	5 cut(s)	209, 299, 620, 627, 1783
PsyI	GACNNNGTC	2 cut(s)	448, 1619
PvuII	CAGCTG	2 cut(s)	86, 1429
RsaI	GTAC	7 cut(s)	44, 108, 495, 1215, 1406, 1695, 1741
RsaNI	GTAC	7 cut(s)	43, 107, 494, 1214, 1405, 1694, 1740
RseI	CAYNNNNRTG	1 cut(s)	126
Rsr2I	CGGWCCG	1 cut(s)	362
RsrII	CGGWCCG	1 cut(s)	362
SalI	GTCGAC	1 cut(s)	1613
SaqAI	TTAA	5 cut(s)	815, 942, 1187, 1289, 1422
SatI	GCNGC	6 cut(s)	84, 285, 423, 696, 1265, 1746
Sau96I	GGNCC	4 cut(s)	362, 635, 749, 1243
ScaI	AGTACT	1 cut(s)	1215
SchI	GAGTC	1 cut(s)	187
SfaNI	GCATC	4 cut(s)	466, 879, 1210, 1812
SfcI	CTRYAG	1 cut(s)	1455
SfoI	GGCGCC	1 cut(s)	1849
SfuI	TTCGAA	2 cut(s)	235, 915
SinI	GGWCC	2 cut(s)	362, 749
SmiMI	CAYNNNNRTG	1 cut(s)	126
SmlI	CTYRAG	2 cut(s)	596, 941
SmoI	CTYRAG	2 cut(s)	596, 941
SpeI	ACTAGT	2 cut(s)	496, 1609
SphI	GCATGC	1 cut(s)	1565
SsiI	CCGC	3 cut(s)	57, 422, 558
SspDI	GGCGCC	1 cut(s)	1847
SspMI	CTAG	6 cut(s)	111, 252, 497, 1310, 1337, 1610
StyI	CCWWGG	4 cut(s)	587, 855, 1387, 1890
TaaI	ACNGT	9 cut(s)	437, 448, 532, 1045, 1213, 1557, 1582, 1621, 1714
TaiI	ACGT	1 cut(s)	1902
TaqI	TCGA	5 cut(s)	235, 535, 915, 954, 1614
TaqII	GACCGA	1 cut(s)	350
TatI	WGTACW	4 cut(s)	42, 493, 1213, 1693
TauI	GCSGC	1 cut(s)	425
TfiI	GAWTC	5 cut(s)	237, 537, 1025, 1125, 1165
Tru1I	TTAA	5 cut(s)	815, 942, 1187, 1289, 1422
Tru9I	TTAA	5 cut(s)	815, 942, 1187, 1289, 1422
TscAI	CASTG	6 cut(s)	551, 705, 799, 1135, 1275, 1624
TseFI	GTSAC	2 cut(s)	88, 141
TseI	GCWGC	5 cut(s)	83, 284, 695, 1264, 1745
Tsp45I	GTSAC	2 cut(s)	88, 141
TspDTI	ATGAA	7 cut(s)	347, 763, 949, 1022, 1288, 1634, 1766
TspGWI	ACGGA	1 cut(s)	354
TspRI	CASTG	6 cut(s)	551, 705, 799, 1135, 1275, 1624
Tth111I	GACNNNGTC	2 cut(s)	448, 1619
Van91I	CCANNNNNTGG	1 cut(s)	1812
Vha464I	CTTAAG	1 cut(s)	941
VpaK11BI	GGWCC	2 cut(s)	362, 749
VspI	ATTAAT	1 cut(s)	1289
XagI	CCTNNNNNAGG	3 cut(s)	599, 642, 984
XapI	RAATTY	4 cut(s)	17, 737, 1369, 1469
XceI	RCATGY	2 cut(s)	125, 1565
XcmI	CCANNNNNNNNNTGG	3 cut(s)	157, 1354, 1496
XmiI	GTMKAC	1 cut(s)	1614
XmnI	GAANNNNTTC	2 cut(s)	531, 1347
XspI	CTAG	6 cut(s)	111, 252, 497, 1310, 1337, 1610
ZrmI	AGTACT	1 cut(s)	1215
Zsp2I	ATGCAT	1 cut(s)	481

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.