Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr1A

Orthogroup ID

OG0002240

Physical Location & Seq

Genomic Coordinates Reverse (-)

52760937 .. 52765654

Gene Structure 4718 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh1AG296600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1554 bp

ATGGCAACTGTCACTGCTTCAAGCTTCACTTCCACAAGCGCTCATGTCAACTACGGCGTGTCATCTTCCCCAGAGGCTAAACCGACGTTTCAGAACTTGGGTTTTGGGAAGCAGGTCCCGACCCATAATGGGTTGAGAGCTTTGAACGTAGCGACTGCGAAATCGATTGCAATGAGGAAATTGAACACTCGGAGTTCGAAGCGTTCGGGTGCTATTGTATGTGGGAGTGGGATGAATTTGGTGTTTGTGGGTGCAGAGGTTGGTCCATGGAGCAAGACTGGTGGACTTGGAGATGTTCTTGGAGGTCTCCCACCAGCTATGGCTGCAAATGGGCACCGTGTGATGACTGTTTCACCGCGTTATGATCAGTACAAAGATGCATGGGATACAGAAGTGACAGTAGAGCTTAAAGTAGGACAGAAGATTGAGACGGTTCGGTTTTTTCACTGCCACAAACGAGGGGTTGATCGTGTTTTTGTGGATCACCCGCTGTTTCTCGAAAAGGTATGGGGGAAAACTGCATCGAAAATATATGGGCCTAGGGCTGGTAAGGATTACACAGACAACCAACTTAGATTCAGCGTGTTATGCCAGGCAGCTCTAGAGGCACCAAGAGTTCTGAATCTTACCAGCAACAAATATTTTTCAGGACCATATGGAGAAGATGTTGTTTTCATTGCCAATGACTGGCACACAGCCCTCCTCCCATGCTACCTGAAAGCCATATATCAACCCAAAGGAATATACAAGAGTGCCAAAGTAGCCTTTTGCATTCACAACATTGCATACCAAGGCAGATTTGCATTCGCAGACTTCTCACTTCTCAATCTGCCAGCTGCATTTAAAAGCTCCTTTGACTTCATTGATGGCTATGACAAACCAGTGAAAGGGAGGAAAATTAACTGGATGAAAGCTGGAATCTTAGAATCTGACAAGGTCTTGACCGTTAGCCCGTACTACGCCAAAGAACTTCTTTCTTCAATTGAGAAAGGAGTCGAATTGGATAACATTATTCGGAAAACTGGAATTCTTGGTATAGTAAATGGCATGGATGTCCAGGAATGGAACCCGTTAACTGACAAGTATACAGATGTCAAATATGATGCGACAACAGTGACGGATGCAAAGCCTATTTTGAAAGAAGCCCTCCAAGCAGAAGTCGGTTTGCCAGTGGATAAGAACATCCCTGTAATAGGTTTCATTGGTAGGCTTGAAGAGCAGAAGGGTTCAGATATTCTTATAGAAGCGATTCCCCACTTCATCAAAGAGAATGTTCAGATTATAGTTCTTGGGACTGGCAAAAAACCAATGGAGAAGCAGCTTCTCCAATTGGAAGAAGAATACCCTGACAAAGCTCGAGGAGTAGCAAAATTTAACGTTCCTCTGGCCCATATGATAACAGCCGGAGCTGATTTTATGTTGATTCCCAGCAGATTTGAGCCTTGTGGTCTCATTCAGTTGCATGCTATGCGTTATGGAACTGTAAGATCCGTGCCTCCAAGAAGTTCTTCCTTCGAATTAGCATACATATTTGCAATGTACTGTTTTTTCTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000166 GO:0000271 GO:0003674 GO:0003824 GO:0004373 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005975 GO:0005976 GO:0005982 GO:0006073 GO:0008150 GO:0008152 GO:0008194 GO:0009011 GO:0009058 GO:0009059 GO:0009250 GO:0009501 GO:0009507 GO:0009536 GO:0009987 GO:0016051 GO:0016740 GO:0016757 GO:0016758 GO:0017076 GO:0019252 GO:0019863 GO:0019865 GO:0030554 GO:0032553 GO:0032555 GO:0032559 GO:0033692 GO:0034637 GO:0034645 GO:0035251 GO:0036094 GO:0043167 GO:0043168 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043531 GO:0044042 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044424 GO:0044444 GO:0044464 GO:0044877 GO:0046527 GO:0071704 GO:0097159 GO:0097367 GO:1901265 GO:1901363 GO:1901576

KEGG Pathways

Metabolic & Signaling

ko00500 ko01100 ko01110 map00500 map01100 map01110

Pfam Domains

Protein Families

Glyco_transf_5 Glycos_transf_1

Protein Analysis

517

Amino Acids

57.13

Weight (kDa)

9.06

Isoelectric Point (pI)

31.38

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Glyco_transf_5	PF08323	80 - 339	9.8e-65	Starch synthase catalytic domain
Glycos_transf_1	PF00534	391 - 494	2e-10	Glycosyl transferases group 1
Glyco_trans_1_4	PF13692	396 - 494	8.1e-11	Glycosyl transferases group 1

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002240)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G32900
fragaria_vesca	FvH4_5g10580 FvH4_5g10580 FvH4_5g10580 FvH4_5g10580 FvH4_5g10580 FvH4_5g10580 FvH4_7g17630 FvH4_7g17630 FvH4_7g17630 FvH4_7g17630
malus_domestica	MD06G1122100.v1.1 MD07G1159300.v1.1 MD14G1138500.v1.1
prunus_persica	Prupe.2G197400_v2.0.a1 Prupe.2G197400_v2.0.a1 Prupe.2G197400_v2.0.a1 Prupe.5G132800_v2.0.a1 Prupe.5G132800_v2.0.a1
pyrus_communis	pycom01g11240 pycom06g11320 pycom07g15590 pycom14g11360
rosa_chinensis	RchiOBHm_Chr1g0361061 RchiOBHm_Chr7g0187571
rosa_laevigata	RLG00000004770 RLG00000027751
rosa_multiflora	Rmu_co8027448.1_g000001 Rmu_sc0000677.1_g000001 Rmu_ssc0000110.1_g000020
rosa_roxburghii	Rroxscaffold_3G00267310 Rroxscaffold_4G00295460
rosa_rugosa	Rorug01G0285200 Rorug06G0482700
rosa_samantha	Rh1AG296600 Rh1BG260900 Rh1CG278200 Rh1DG290900 Rh7AG087600 Rh7BG088900 Rh7CG088100 Rh7DG089800
rosa_wichuraiana	Rw1G026200

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	103
AccB1I	GGYRCC	2 cut(s)	333, 607
AccB7I	CCANNNNNTGG	1 cut(s)	687
AccI	GTMKAC	1 cut(s)	1085
AccII	CGCG	1 cut(s)	358
AciI	CCGC	2 cut(s)	356, 488
AclI	AACGTT	1 cut(s)	1377
AclWI	GGATC	2 cut(s)	489, 1482
AcsI	RAATTY	3 cut(s)	235, 1026, 1370
AdeI	CACNNNGTG	1 cut(s)	340
AfaI	GTAC	3 cut(s)	371, 956, 1541
AfeI	AGCGCT	1 cut(s)	40
AfiI	CCNNNNNNNGG	5 cut(s)	129, 545, 687, 887, 1193
AgsI	TTSAA	6 cut(s)	21, 145, 184, 981, 1138, 1214
AjnI	CCWGG	2 cut(s)	591, 1056
AjuI	GAANNNNNNNTTGG	2 cut(s)	1492, 1524
Alw26I	GTCTC	3 cut(s)	311, 422, 1454
AlwI	GGATC	2 cut(s)	489, 1482
Ama87I	CYCGRG	1 cut(s)	1356
Aor51HI	AGCGCT	1 cut(s)	40
AoxI	GGCC	2 cut(s)	536, 1386
ApeKI	GCWGC	4 cut(s)	323, 596, 836, 1318
ApoI	RAATTY	3 cut(s)	235, 1026, 1370
Asp700I	GAANNNNTTC	2 cut(s)	1248, 1507
AspA2I	CCTAGG	1 cut(s)	539
AspLEI	GCGC	1 cut(s)	41
AspS9I	GGNCC	5 cut(s)	115, 263, 536, 650, 1387
AsuHPI	GGTGA	2 cut(s)	345, 476
AsuII	TTCGAA	2 cut(s)	197, 1515
AvaI	CYCGRG	1 cut(s)	1356
AvaII	GGWCC	3 cut(s)	115, 263, 650
AvrII	CCTAGG	1 cut(s)	539
BaeGI	GKGCMC	1 cut(s)	336
BaeI	ACNNNNGTAYC	2 cut(s)	378, 411
BanI	GGYRCC	2 cut(s)	333, 607
BbvI	GCAGC	4 cut(s)	310, 608, 823, 1330
BccI	CCATC	1 cut(s)	860
BceAI	ACGGC	1 cut(s)	70
BciT130I	CCWGG	2 cut(s)	593, 1058
BciVI	GTATCC	1 cut(s)	379
BclI	TGATCA	1 cut(s)	364
BcoDI	GTCTC	3 cut(s)	311, 422, 1454
BfaI	CTAG	2 cut(s)	540, 602
BfoI	RGCGCY	1 cut(s)	42
BfuAI	ACCTGC	1 cut(s)	103
BfuI	GTATCC	1 cut(s)	379
BisI	GCNGC	4 cut(s)	324, 597, 837, 1319
BlnI	CCTAGG	1 cut(s)	539
BlsI	GCNGC	4 cut(s)	325, 598, 838, 1320
Bme1390I	CCNGG	2 cut(s)	593, 1058
Bme18I	GGWCC	3 cut(s)	115, 263, 650
BmeT110I	CYCGRG	1 cut(s)	1356
BmgT120I	GGNCC	5 cut(s)	115, 263, 536, 650, 1387
BmiI	GGNNCC	4 cut(s)	117, 335, 609, 1067
BmrFI	CCNGG	2 cut(s)	593, 1058
BmsI	GCATC	4 cut(s)	367, 530, 1093, 1111
Bpu14I	TTCGAA	2 cut(s)	197, 1515
Bsa29I	ATCGAT	1 cut(s)	164
BsaI	GGTCTC	2 cut(s)	311, 1454
BsaJI	CCNNGG	3 cut(s)	266, 539, 790
BsaXI	ACNNNNNCTCC	2 cut(s)	651, 681
Bsc4I	CCNNNNNNNGG	5 cut(s)	129, 545, 687, 887, 1193
Bse1I	ACTGG	7 cut(s)	283, 692, 881, 908, 1027, 1169, 1300
Bse3DI	GCAATG	4 cut(s)	177, 675, 780, 1542
BseBI	CCWGG	2 cut(s)	593, 1058
BseCI	ATCGAT	1 cut(s)	164
BseDI	CCNNGG	3 cut(s)	266, 539, 790
BseGI	GGATG	5 cut(s)	237, 912, 1057, 1126, 1182
BseLI	CCNNNNNNNGG	5 cut(s)	129, 545, 687, 887, 1193
BseMI	GCAATG	4 cut(s)	177, 675, 780, 1542
BseNI	ACTGG	7 cut(s)	283, 692, 881, 908, 1027, 1169, 1300
BseRI	GAGGAG	2 cut(s)	692, 1374
BseSI	GKGCMC	1 cut(s)	336
BseXI	GCAGC	4 cut(s)	310, 608, 823, 1330
BseYI	CCCAGC	1 cut(s)	1427
BsgI	GTGCAG	1 cut(s)	273
Bsh1236I	CGCG	1 cut(s)	358
BshFI	GGCC	2 cut(s)	538, 1388
BshNI	GGYRCC	2 cut(s)	333, 607
BshVI	ATCGAT	1 cut(s)	164
BsiHKCI	CYCGRG	1 cut(s)	1356
BsiSI	CCGG	1 cut(s)	1404
BslFI	GGGAC	2 cut(s)	101, 1306
BslI	CCNNNNNNNGG	5 cut(s)	129, 545, 687, 887, 1193
BsmAI	GTCTC	3 cut(s)	311, 422, 1454
BsmBI	CGTCTC	1 cut(s)	422
BsmFI	GGGAC	2 cut(s)	101, 1306
BsmI	GAATGC	2 cut(s)	771, 803
BsnI	GGCC	2 cut(s)	538, 1388
Bso31I	GGTCTC	2 cut(s)	311, 1454
BsoBI	CYCGRG	1 cut(s)	1356
Bsp119I	TTCGAA	2 cut(s)	197, 1515
Bsp1286I	GDGCHC	1 cut(s)	336
Bsp143I	GATC	4 cut(s)	364, 466, 481, 1487
Bsp19I	CCATGG	1 cut(s)	266
BspACI	CCGC	2 cut(s)	356, 488
BspANI	GGCC	2 cut(s)	538, 1388
BspDI	ATCGAT	1 cut(s)	164
BspFNI	CGCG	1 cut(s)	358
BspLI	GGNNCC	4 cut(s)	117, 335, 609, 1067
BspMI	ACCTGC	1 cut(s)	103
BspPI	GGATC	2 cut(s)	489, 1482
BspQI	GCTCTTC	1 cut(s)	1209
BspT104I	TTCGAA	2 cut(s)	197, 1515
BspT107I	GGYRCC	2 cut(s)	333, 607
BspTNI	GGTCTC	2 cut(s)	311, 1454
BsrDI	GCAATG	4 cut(s)	177, 675, 780, 1542
BsrI	ACTGG	7 cut(s)	283, 692, 881, 908, 1027, 1169, 1300
BssECI	CCNNGG	3 cut(s)	266, 539, 790
BssMI	GATC	4 cut(s)	364, 466, 481, 1487
BssNAI	GTATAC	1 cut(s)	1086
BssT1I	CCWWGG	3 cut(s)	266, 539, 790
Bst1107I	GTATAC	1 cut(s)	1086
Bst2UI	CCWGG	2 cut(s)	593, 1058
Bst4CI	ACNGT	9 cut(s)	10, 338, 349, 400, 433, 946, 1114, 1483, 1544
Bst6I	CTCTTC	1 cut(s)	1209
BstAPI	GCANNNNNTGC	1 cut(s)	1468
BstBI	TTCGAA	2 cut(s)	197, 1515
BstC8I	GCNNGC	2 cut(s)	834, 1464
BstDEI	CTNAG	2 cut(s)	572, 922
BstDSI	CCRYGG	1 cut(s)	266
BstENI	CCTNNNNNAGG	1 cut(s)	1191
BstF5I	GGATG	5 cut(s)	237, 912, 1057, 1126, 1182
BstFNI	CGCG	1 cut(s)	358
BstH2I	RGCGCY	1 cut(s)	42
BstHHI	GCGC	1 cut(s)	41
BstKTI	GATC	4 cut(s)	367, 469, 484, 1490
BstMAI	GTCTC	3 cut(s)	311, 422, 1454
BstMBI	GATC	4 cut(s)	364, 466, 481, 1487
BstMWI	GCNNNNNNNGC	7 cut(s)	323, 588, 605, 761, 1151, 1216, 1468
BstNI	CCWGG	2 cut(s)	593, 1058
BstNSI	RCATGY	1 cut(s)	1466
BstSCI	CCNGG	2 cut(s)	591, 1056
BstSLI	GKGCMC	1 cut(s)	336
BstUI	CGCG	1 cut(s)	358
BstV1I	GCAGC	4 cut(s)	310, 608, 823, 1330
BstX2I	RGATCY	1 cut(s)	1487
BstYI	RGATCY	1 cut(s)	1487
BstZ17I	GTATAC	1 cut(s)	1086
Bsu15I	ATCGAT	1 cut(s)	164
BsuI	GTATCC	1 cut(s)	379
BsuRI	GGCC	2 cut(s)	538, 1388
BsuTUI	ATCGAT	1 cut(s)	164
BtgI	CCRYGG	1 cut(s)	266
BtsCI	GGATG	5 cut(s)	237, 912, 1057, 1126, 1182
BtsI	GCAGTG	2 cut(s)	12, 445
BtsIMutI	CAGTG	5 cut(s)	12, 445, 888, 1119, 1176
BveI	ACCTGC	1 cut(s)	103
Cac8I	GCNNGC	2 cut(s)	834, 1464
CfoI	GCGC	1 cut(s)	41
Cfr13I	GGNCC	5 cut(s)	115, 263, 536, 650, 1387
ClaI	ATCGAT	1 cut(s)	164
Csp6I	GTAC	3 cut(s)	370, 955, 1540
CspCI	CAANNNNNGTGG	2 cut(s)	262, 297
CviAII	CATG	6 cut(s)	44, 267, 381, 708, 1048, 1463
CviQI	GTAC	3 cut(s)	370, 955, 1540
DdeI	CTNAG	2 cut(s)	572, 922
DpnI	GATC	4 cut(s)	366, 468, 483, 1489
DpnII	GATC	4 cut(s)	364, 466, 481, 1487
DraI	TTTAAA	1 cut(s)	844
DraIII	CACNNNGTG	1 cut(s)	340
Eam1104I	CTCTTC	1 cut(s)	1209
EarI	CTCTTC	1 cut(s)	1209
Eco130I	CCWWGG	3 cut(s)	266, 539, 790
Eco31I	GGTCTC	2 cut(s)	311, 1454
Eco47I	GGWCC	3 cut(s)	115, 263, 650
Eco47III	AGCGCT	1 cut(s)	40
Eco88I	CYCGRG	1 cut(s)	1356
EcoNI	CCTNNNNNAGG	1 cut(s)	1191
EcoO109I	RGGNCCY	1 cut(s)	115
EcoRI	GAATTC	1 cut(s)	1026
EcoRII	CCWGG	2 cut(s)	591, 1056
EcoT14I	CCWWGG	3 cut(s)	266, 539, 790
EcoT22I	ATGCAT	1 cut(s)	382
ErhI	CCWWGG	3 cut(s)	266, 539, 790
Esp3I	CGTCTC	1 cut(s)	422
FaeI	CATG	6 cut(s)	47, 270, 384, 711, 1051, 1466
FalI	AAGNNNNNCTT	6 cut(s)	13, 45, 957, 989, 1492, 1524
FaqI	GGGAC	2 cut(s)	101, 1306
FatI	CATG	6 cut(s)	43, 266, 380, 707, 1047, 1462
FauI	CCCGC	1 cut(s)	495
FauNDI	CATATG	2 cut(s)	655, 1392
FbaI	TGATCA	1 cut(s)	364
FblI	GTMKAC	1 cut(s)	1085
Fnu4HI	GCNGC	4 cut(s)	324, 597, 837, 1319
FokI	GGATG	5 cut(s)	244, 919, 1064, 1133, 1169
Fsp4HI	GCNGC	4 cut(s)	324, 597, 837, 1319
FspBI	CTAG	2 cut(s)	540, 602
GlaI	GCGC	1 cut(s)	40
GluI	GCNGC	4 cut(s)	324, 597, 837, 1319
GsaI	CCCAGC	1 cut(s)	1431
HaeII	RGCGCY	1 cut(s)	42
HaeIII	GGCC	2 cut(s)	538, 1388
HapII	CCGG	1 cut(s)	1404
HhaI	GCGC	1 cut(s)	41
Hin1II	CATG	6 cut(s)	47, 270, 384, 711, 1051, 1466
Hin6I	GCGC	1 cut(s)	39
HinP1I	GCGC	1 cut(s)	39
HincII	GTYRAC	2 cut(s)	49, 1074
HindII	GTYRAC	2 cut(s)	49, 1074
HindIII	AAGCTT	1 cut(s)	22
HinfI	GANTC	7 cut(s)	576, 622, 918, 926, 993, 1249, 1423
HpaI	GTTAAC	1 cut(s)	1074
HpaII	CCGG	1 cut(s)	1404
HphI	GGTGA	2 cut(s)	345, 476
Hpy166II	GTNNAC	4 cut(s)	49, 284, 1074, 1086
Hpy188I	TCNGA	7 cut(s)	93, 192, 621, 931, 1017, 1231, 1278
Hpy188III	TCNNGA	5 cut(s)	118, 497, 602, 648, 940
Hpy8I	GTNNAC	4 cut(s)	49, 284, 1074, 1086
Hpy99I	CGWCG	1 cut(s)	88
HpyAV	CCTTC	2 cut(s)	1216, 1522
HpyCH4III	ACNGT	9 cut(s)	10, 338, 349, 400, 433, 946, 1114, 1483, 1544
HpyCH4IV	ACGT	3 cut(s)	86, 147, 1377
HpyF10VI	GCNNNNNNNGC	7 cut(s)	323, 588, 605, 761, 1151, 1216, 1468
HpyF3I	CTNAG	2 cut(s)	572, 922
HpySE526I	ACGT	3 cut(s)	86, 147, 1377
Hsp92II	CATG	6 cut(s)	47, 270, 384, 711, 1051, 1466
HspAI	GCGC	1 cut(s)	39
Ksp22I	TGATCA	1 cut(s)	364
KspAI	GTTAAC	1 cut(s)	1074
Kzo9I	GATC	4 cut(s)	364, 466, 481, 1487
LguI	GCTCTTC	1 cut(s)	1209
LmnI	GCTCC	3 cut(s)	270, 854, 1406
Lsp1109I	GCAGC	4 cut(s)	310, 608, 823, 1330
LweI	GCATC	4 cut(s)	367, 530, 1093, 1111
MaeI	CTAG	2 cut(s)	540, 602
MaeII	ACGT	3 cut(s)	86, 147, 1377
MaeIII	GTNAC	3 cut(s)	10, 394, 1114
MalI	GATC	4 cut(s)	366, 468, 483, 1489
MboI	GATC	4 cut(s)	364, 466, 481, 1487
MboII	GAAGA	8 cut(s)	57, 433, 674, 969, 1226, 1346, 1349, 1500
MfeI	CAATTG	2 cut(s)	981, 1328
MflI	RGATCY	1 cut(s)	1487
MhlI	GDGCHC	1 cut(s)	336
MluCI	AATT	9 cut(s)	179, 235, 897, 981, 998, 1026, 1328, 1370, 1517
MlyI	GAGTC	1 cut(s)	1002
Mph1103I	ATGCAT	1 cut(s)	382
MroXI	GAANNNNTTC	2 cut(s)	1248, 1507
MseI	TTAA	5 cut(s)	408, 843, 900, 1073, 1374
MspA1I	CMGCKG	2 cut(s)	490, 836
MspI	CCGG	1 cut(s)	1404
MspR9I	CCNGG	2 cut(s)	593, 1058
MunI	CAATTG	2 cut(s)	981, 1328
Mva1269I	GAATGC	2 cut(s)	771, 803
MvaI	CCWGG	2 cut(s)	593, 1058
MvnI	CGCG	1 cut(s)	358
MwoI	GCNNNNNNNGC	7 cut(s)	323, 588, 605, 761, 1151, 1216, 1468
NcoI	CCATGG	1 cut(s)	266
NdeI	CATATG	2 cut(s)	655, 1392
NdeII	GATC	4 cut(s)	364, 466, 481, 1487
NlaIII	CATG	6 cut(s)	47, 270, 384, 711, 1051, 1466
NlaIV	GGNNCC	4 cut(s)	117, 335, 609, 1067
NmuCI	GTSAC	3 cut(s)	10, 394, 1114
NsiI	ATGCAT	1 cut(s)	382
NspI	RCATGY	1 cut(s)	1466
NspV	TTCGAA	2 cut(s)	197, 1515
PaeI	GCATGC	1 cut(s)	1466
PaeR7I	CTCGAG	1 cut(s)	1356
PciSI	GCTCTTC	1 cut(s)	1209
PctI	GAATGC	2 cut(s)	771, 803
PdmI	GAANNNNTTC	2 cut(s)	1248, 1507
PfeI	GAWTC	6 cut(s)	576, 622, 918, 926, 1249, 1423
PflFI	GACNNNGTC	1 cut(s)	935
PflMI	CCANNNNNTGG	1 cut(s)	687
PfoI	TCCNGGA	1 cut(s)	1056
PkrI	GCNGC	4 cut(s)	325, 598, 838, 1320
PleI	GAGTC	1 cut(s)	1001
PpsI	GAGTC	1 cut(s)	1001
PpuMI	RGGWCCY	1 cut(s)	115
Psp1406I	AACGTT	1 cut(s)	1377
Psp5II	RGGWCCY	1 cut(s)	115
Psp6I	CCWGG	2 cut(s)	591, 1056
PspFI	CCCAGC	1 cut(s)	1427
PspGI	CCWGG	2 cut(s)	591, 1056
PspN4I	GGNNCC	4 cut(s)	117, 335, 609, 1067
PspPI	GGNCC	5 cut(s)	115, 263, 536, 650, 1387
PspPPI	RGGWCCY	1 cut(s)	115
PspXI	VCTCGAGB	1 cut(s)	1356
PsuI	RGATCY	1 cut(s)	1487
PsyI	GACNNNGTC	1 cut(s)	935
PvuII	CAGCTG	1 cut(s)	836
RsaI	GTAC	3 cut(s)	371, 956, 1541
RsaNI	GTAC	3 cut(s)	370, 955, 1540
SapI	GCTCTTC	1 cut(s)	1209
SaqAI	TTAA	5 cut(s)	408, 843, 900, 1073, 1374
SatI	GCNGC	4 cut(s)	324, 597, 837, 1319
Sau3AI	GATC	4 cut(s)	364, 466, 481, 1487
Sau96I	GGNCC	5 cut(s)	115, 263, 536, 650, 1387
SchI	GAGTC	1 cut(s)	1002
ScrFI	CCNGG	2 cut(s)	593, 1058
SduI	GDGCHC	1 cut(s)	336
SfaNI	GCATC	4 cut(s)	367, 530, 1093, 1111
Sfr274I	CTCGAG	1 cut(s)	1356
SfuI	TTCGAA	2 cut(s)	197, 1515
SinI	GGWCC	3 cut(s)	115, 263, 650
SlaI	CTCGAG	1 cut(s)	1356
SmlI	CTYRAG	1 cut(s)	1356
SmoI	CTYRAG	1 cut(s)	1356
SphI	GCATGC	1 cut(s)	1466
Sse9I	AATT	9 cut(s)	179, 235, 897, 981, 998, 1026, 1328, 1370, 1517
SsiI	CCGC	2 cut(s)	356, 488
SspI	AATATT	1 cut(s)	641
SspMI	CTAG	2 cut(s)	540, 602
StyD4I	CCNGG	2 cut(s)	591, 1056
StyI	CCWWGG	3 cut(s)	266, 539, 790
TaaI	ACNGT	9 cut(s)	10, 338, 349, 400, 433, 946, 1114, 1483, 1544
TaiI	ACGT	3 cut(s)	89, 150, 1380
TaqI	TCGA	7 cut(s)	164, 197, 498, 524, 996, 1357, 1515
TasI	AATT	9 cut(s)	179, 235, 897, 981, 998, 1026, 1328, 1370, 1517
TatI	WGTACW	2 cut(s)	369, 1539
TfiI	GAWTC	6 cut(s)	576, 622, 918, 926, 1249, 1423
Tru1I	TTAA	5 cut(s)	408, 843, 900, 1073, 1374
Tru9I	TTAA	5 cut(s)	408, 843, 900, 1073, 1374
TscAI	CASTG	5 cut(s)	19, 452, 888, 1119, 1176
TseFI	GTSAC	3 cut(s)	10, 394, 1114
TseI	GCWGC	4 cut(s)	323, 596, 836, 1318
Tsp45I	GTSAC	3 cut(s)	10, 394, 1114
TspDTI	ATGAA	6 cut(s)	248, 664, 850, 923, 1189, 1249
TspGWI	ACGGA	2 cut(s)	1133, 1480
TspRI	CASTG	5 cut(s)	19, 452, 888, 1119, 1176
Tth111I	GACNNNGTC	1 cut(s)	935
Van91I	CCANNNNNTGG	1 cut(s)	687
VpaK11BI	GGWCC	3 cut(s)	115, 263, 650
XagI	CCTNNNNNAGG	1 cut(s)	1191
XapI	RAATTY	3 cut(s)	235, 1026, 1370
XbaI	TCTAGA	1 cut(s)	601
XceI	RCATGY	1 cut(s)	1466
XhoI	CTCGAG	1 cut(s)	1356
XmaJI	CCTAGG	1 cut(s)	539
XmiI	GTMKAC	1 cut(s)	1085
XmnI	GAANNNNTTC	2 cut(s)	1248, 1507
XspI	CTAG	2 cut(s)	540, 602
Zsp2I	ATGCAT	1 cut(s)	382

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.