FvH4_5g14600

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
OG0016849
Physical Location & Seq
Reverse (-)
8283341 .. 8284972
1632 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g14600.t1

Sequence Viewer

Length: 1632 bp
ATGGGAGTAAGAGCTTTAGAGCAGCGCCTCTTTCATCTGCTACGGAGCTGCAGCAGACTCCAAAATCTGATACAAATCCATACACAAATTCTAGTTCACGGTTTGGCTCAGAAAAGCTACATTCTTTCTAAGCTGGTAGCATTCTATGTAGCTTCTGCGCGTCTCGAGGATGCGCTCCGAGTTTTTGGGAATGTAGAGAATCCGAGTATCACTGTGTGGAACCAGATGATCAGAGGATATGGTGGTAGCGAAACTCCGAGGAAGGCGGTTGAGTTGTATAAGAGGCTAGTGGCGACGGAGGCCGAGCCGGATGGGTATACGTATTTGTATGTGGTTAGTGCTTGTGCTAGGTCAGGGCTGGTTAGAGAGGGTGAGCAGTTGCATGGGCGAGTTTTGGTTGGTGGGTTTGGTTGTAATGTGTTTATTCAGACTAGTTTGGTTAGTTTTTATGCAACGGGTGGAGGGTTAAGTAGTGGTGTGGGGTATGCACGCCAGGTGTTTGATGAAATGCGTGAGAGGAGTGTTGTCAGTTGGAATGTGCTGCTTGGTGGGTATGTAAGGAGTATGGATTTTGATGCGGCGCGGAGAGTTTTTGATGAGATGCCAGAGAGGAATGTGGTGTCGTGGACAACGATGATTGCGGGGTGTGCTCAGAATGGGAGGTCGAAGGAGGCTTTGTGTTTGTTTGGGCAGATGAGGAGGGCGAATGTGGAACTGGACCAGGTTGCGCTAGTGTCGGTGTTGTCGGCGTGTGCTGAAATTGGGGATTTGAGATTGGGAAGGTGGATTCATTGGTATGTTGAGGAGAGATTGTGTGTAAGAGGCAAGTCGCGGTTGGTGACTTTGTACAATGCACTCGTTCACATGTATGCCAGTTGTGGTTTCGTTGATGAAGCCTATAAGGTGTTCAAACAGATTCCTAGAAGAAGCACTGTCTCGTGGACCAGCATTATAGTTGGTTTTGCAAAGCAGGGTCGCGGGGAGGAAGCTCTTCGTATGTTTCGGTTGATGCTAAGCTCGGGAGTTGATGATATAAAACCTGATGAAATAACATTCCTTGGGGTGTTGTGTGCTTGTAGCCATGCTGGATTAGTTGATGAGGGCAGAGAGCTTTTCAAGTTCATGACGCAGACGTGGGGACTGGAACCAAGGATTGAGCACTATGGCTGCATGGTCGATCTATTAAGCCGTGCTGGTTTTCTAAACGAAGCTCATGAACTTGTGGAAACTATGCCAATGGAGCCAAACGACGGAGTGTGGGGTGCTCTCCTTGGCGGCTGCATGCTTCACAAGAATTCTGAGCTTGCATCACTAGTAGCTCAAAAGCTAACAGTTGCACTTGACCCTGACCAAGCGGCAGGGTATCTTGTGCTCTTATCAAATGTGTATGCTTGTGCTAAGAGATGGCTAGATGTTGCTCATGTGAGACAGAAAATGGTTCAGATGGGCGTGAAGAAGCCCCCAGGCCGAAGTTGGATTCAAATCGATAGAGCTGTTCATGGTTTTGTGGCAGGTGATAGAACCCATAAACATGAATCTTTGATCTATGAAATGCTTGGCGAGATCACAGGGCAAACCCAGCAAGAAGGCACCGAACCAGACATATTAAACACGGTTTCCCTTGAAGACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PPR PPR_2

Protein Analysis

544

Amino Acids

60.59

Weight (kDa)

6.92

Isoelectric Point (pI)

42.34

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 68 - 117 3.5e-06 PPR repeat family
PPR_2 PF13041 174 - 206 8.6e-07 PPR repeat family
PPR PF01535 176 - 206 3.2e-06 PPR repeat
PPR_2 PF13041 204 - 252 7.8e-10 PPR repeat family
PPR PF01535 207 - 237 4.8e-08 PPR repeat
PPR_2 PF13041 310 - 360 6.3e-08 PPR repeat family
PPR PF01535 312 - 342 3.6e-07 PPR repeat
E_motif PF20431 430 - 494 1.7e-15 E motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0016849)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g14600
malus_domestica MD06G1197100.v1.1
prunus_persica Prupe.5G197400_v2.0.a1
pyrus_communis pycom06g17390
rosa_chinensis RchiOBHm_Chr7g0181891
rosa_laevigata RLG00000005165
rosa_multiflora Rmu_co8431917.1_g000001 Rmu_sc0021327.1_g000007
rosa_roxburghii Rroxscaffold_3G00271660
rosa_rugosa Rorug06G0444800
rosa_samantha Rh7AG047100 Rh7BG046700 Rh7CG047200
rosa_wichuraiana Rw7G003900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 1502
Acc36I ACCTGC 1 cut(s) 1502
AccB1I GGYRCC 1 cut(s) 1589
AccI GTMKAC 1 cut(s) 317
AccII CGCG 4 cut(s) 160, 583, 832, 978
AciI CCGC 8 cut(s) 266, 578, 583, 641, 832, 978, 1275, 1355
AcsI RAATTY 2 cut(s) 87, 1294
AdeI CACNNNGTG 1 cut(s) 216
AfaI GTAC 1 cut(s) 848
AfiI CCNNNNNNNGG 1 cut(s) 1250
AflIII ACRYGT 1 cut(s) 864
AgsI TTSAA 4 cut(s) 910, 1117, 1481, 1625
AhlI ACTAGT 2 cut(s) 431, 1312
AjiI CACGTC 1 cut(s) 1134
AjnI CCWGG 3 cut(s) 492, 720, 1462
Alw21I GWGCWC 4 cut(s) 652, 1161, 1267, 1374
Alw26I GTCTC 3 cut(s) 167, 940, 1420
Ama87I CYCGRG 2 cut(s) 164, 1018
AoxI GGCC 2 cut(s) 300, 1465
ApeKI GCWGC 6 cut(s) 22, 48, 51, 541, 1167, 1278
ApoI RAATTY 2 cut(s) 87, 1294
Asp700I GAANNNNTTC 1 cut(s) 990
AspLEI GCGC 5 cut(s) 27, 160, 175, 583, 730
AspS9I GGNCC 2 cut(s) 718, 942
AsuHPI GGTGA 3 cut(s) 383, 850, 1526
AvaI CYCGRG 2 cut(s) 164, 1018
AvaII GGWCC 2 cut(s) 718, 942
BanI GGYRCC 1 cut(s) 1589
BauI CACGAG 1 cut(s) 937
Bbv12I GWGCWC 4 cut(s) 652, 1161, 1267, 1374
BbvI GCAGC 6 cut(s) 34, 35, 63, 528, 1154, 1265
BccI CCATC 3 cut(s) 305, 1398, 1438
BceAI ACGGC 1 cut(s) 1173
BciT130I CCWGG 3 cut(s) 494, 722, 1464
BclI TGATCA 1 cut(s) 228
BcoDI GTCTC 3 cut(s) 167, 940, 1420
BcuI ACTAGT 2 cut(s) 431, 1312
BfaI CTAG 9 cut(s) 92, 287, 348, 432, 731, 921, 1313, 1409, 1630
BfmI CTRYAG 1 cut(s) 49
BfoI RGCGCY 1 cut(s) 28
BfuAI ACCTGC 1 cut(s) 1502
BisI GCNGC 9 cut(s) 23, 49, 52, 542, 579, 1168, 1276, 1279, 1356
BlpI GCTNAGC 1 cut(s) 1013
BlsI GCNGC 9 cut(s) 24, 50, 53, 543, 580, 1169, 1277, 1280, 1357
Bme1390I CCNGG 3 cut(s) 494, 722, 1464
Bme18I GGWCC 2 cut(s) 718, 942
BmeT110I CYCGRG 2 cut(s) 164, 1018
BmgBI CACGTC 1 cut(s) 1134
BmgT120I GGNCC 2 cut(s) 718, 942
BmiI GGNNCC 4 cut(s) 221, 1146, 1242, 1591
BmrFI CCNGG 3 cut(s) 494, 722, 1464
BmsI GCATC 5 cut(s) 160, 565, 591, 999, 1316
Bpu1102I GCTNAGC 1 cut(s) 1013
Bsa29I ATCGAT 1 cut(s) 1485
BsaAI YACGTR 1 cut(s) 321
BsaBI GATNNNNATC 2 cut(s) 74, 1481
BsaJI CCNNGG 5 cut(s) 257, 1057, 1148, 1270, 1462
BsaXI ACNNNNNCTCC 4 cut(s) 662, 692, 797, 827
Bsc4I CCNNNNNNNGG 1 cut(s) 1250
Bse1I ACTGG 3 cut(s) 720, 873, 1146
Bse8I GATNNNNATC 2 cut(s) 74, 1481
BseBI CCWGG 3 cut(s) 494, 722, 1464
BseCI ATCGAT 1 cut(s) 1485
BseDI CCNNGG 5 cut(s) 257, 1057, 1148, 1270, 1462
BseGI GGATG 2 cut(s) 175, 316
BseJI GATNNNNATC 2 cut(s) 74, 1481
BseLI CCNNNNNNNGG 1 cut(s) 1250
BseMII CTCAG 3 cut(s) 122, 665, 1290
BseNI ACTGG 3 cut(s) 720, 873, 1146
BseRI GAGGAG 3 cut(s) 532, 712, 818
BseXI GCAGC 6 cut(s) 34, 35, 63, 528, 1154, 1265
BseYI CCCAGC 1 cut(s) 1578
Bsh1236I CGCG 4 cut(s) 160, 583, 832, 978
BshFI GGCC 2 cut(s) 302, 1467
BshNI GGYRCC 1 cut(s) 1589
BshVI ATCGAT 1 cut(s) 1485
BsiHKAI GWGCWC 4 cut(s) 652, 1161, 1267, 1374
BsiHKCI CYCGRG 2 cut(s) 164, 1018
BsiSI CCGG 1 cut(s) 308
BslFI GGGAC 1 cut(s) 1152
BslI CCNNNNNNNGG 1 cut(s) 1250
BsmAI GTCTC 3 cut(s) 167, 940, 1420
BsmBI CGTCTC 1 cut(s) 167
BsmFI GGGAC 1 cut(s) 1152
BsmI GAATGC 1 cut(s) 140
BsnI GGCC 2 cut(s) 302, 1467
BsoBI CYCGRG 2 cut(s) 164, 1018
Bsp1286I GDGCHC 4 cut(s) 652, 1161, 1267, 1374
Bsp1407I TGTACA 1 cut(s) 846
Bsp143I GATC 4 cut(s) 228, 1177, 1542, 1563
Bsp1720I GCTNAGC 1 cut(s) 1013
BspACI CCGC 8 cut(s) 266, 578, 583, 641, 832, 978, 1275, 1355
BspANI GGCC 2 cut(s) 302, 1467
BspCNI CTCAG 3 cut(s) 121, 664, 1291
BspDI ATCGAT 1 cut(s) 1485
BspFNI CGCG 4 cut(s) 160, 583, 832, 978
BspHI TCATGA 2 cut(s) 1122, 1213
BspLI GGNNCC 4 cut(s) 221, 1146, 1242, 1591
BspMAI CTGCAG 1 cut(s) 53
BspMI ACCTGC 1 cut(s) 1502
BspQI GCTCTTC 1 cut(s) 996
BspT107I GGYRCC 1 cut(s) 1589
BsrGI TGTACA 1 cut(s) 846
BsrI ACTGG 3 cut(s) 720, 873, 1146
BssECI CCNNGG 5 cut(s) 257, 1057, 1148, 1270, 1462
BssMI GATC 4 cut(s) 228, 1177, 1542, 1563
BssNAI GTATAC 1 cut(s) 318
BssSI CACGAG 1 cut(s) 937
BssT1I CCWWGG 3 cut(s) 1057, 1148, 1270
Bst1107I GTATAC 1 cut(s) 318
Bst2BI CACGAG 1 cut(s) 937
Bst2UI CCWGG 3 cut(s) 494, 722, 1464
Bst4CI ACNGT 5 cut(s) 101, 214, 934, 1333, 1615
Bst6I CTCTTC 1 cut(s) 996
BstAUI TGTACA 1 cut(s) 846
BstBAI YACGTR 1 cut(s) 321
BstC8I GCNNGC 3 cut(s) 490, 1283, 1305
BstDEI CTNAG 6 cut(s) 108, 129, 651, 1013, 1299, 1398
BstF5I GGATG 2 cut(s) 175, 316
BstFNI CGCG 4 cut(s) 160, 583, 832, 978
BstH2I RGCGCY 1 cut(s) 28
BstHHI GCGC 5 cut(s) 27, 160, 175, 583, 730
BstKTI GATC 4 cut(s) 231, 1180, 1545, 1566
BstMAI GTCTC 3 cut(s) 167, 940, 1420
BstMBI GATC 4 cut(s) 228, 1177, 1542, 1563
BstMWI GCNNNNNNNGC 4 cut(s) 299, 647, 1240, 1579
BstNI CCWGG 3 cut(s) 494, 722, 1464
BstNSI RCATGY 2 cut(s) 868, 1285
BstSCI CCNGG 3 cut(s) 492, 720, 1462
BstSFI CTRYAG 1 cut(s) 49
BstSNI TACGTA 1 cut(s) 321
BstUI CGCG 4 cut(s) 160, 583, 832, 978
BstV1I GCAGC 6 cut(s) 34, 35, 63, 528, 1154, 1265
BstZ17I GTATAC 1 cut(s) 318
Bsu15I ATCGAT 1 cut(s) 1485
BsuRI GGCC 2 cut(s) 302, 1467
BsuTUI ATCGAT 1 cut(s) 1485
BtrI CACGTC 1 cut(s) 1134
BtsCI GGATG 2 cut(s) 175, 316
BtsIMutI CAGTG 2 cut(s) 210, 930
BveI ACCTGC 1 cut(s) 1502
Cac8I GCNNGC 3 cut(s) 490, 1283, 1305
CciI TCATGA 2 cut(s) 1122, 1213
CfoI GCGC 5 cut(s) 27, 160, 175, 583, 730
Cfr13I GGNCC 2 cut(s) 718, 942
ClaI ATCGAT 1 cut(s) 1485
CseI GACGC 2 cut(s) 149, 1135
CsiI ACCWGGT 1 cut(s) 720
Csp6I GTAC 1 cut(s) 847
CviQI GTAC 1 cut(s) 847
DdeI CTNAG 6 cut(s) 108, 129, 651, 1013, 1299, 1398
DpnI GATC 4 cut(s) 230, 1179, 1544, 1565
DpnII GATC 4 cut(s) 228, 1177, 1542, 1563
DraIII CACNNNGTG 1 cut(s) 216
Eam1104I CTCTTC 1 cut(s) 996
EarI CTCTTC 1 cut(s) 996
Eco105I TACGTA 1 cut(s) 321
Eco130I CCWWGG 3 cut(s) 1057, 1148, 1270
Eco47I GGWCC 2 cut(s) 718, 942
Eco88I CYCGRG 2 cut(s) 164, 1018
EcoRI GAATTC 1 cut(s) 1294
EcoRII CCWGG 3 cut(s) 492, 720, 1462
EcoT14I CCWWGG 3 cut(s) 1057, 1148, 1270
ErhI CCWWGG 3 cut(s) 1057, 1148, 1270
Esp3I CGTCTC 1 cut(s) 167
FaqI GGGAC 1 cut(s) 1152
FauI CCCGC 2 cut(s) 634, 971
FbaI TGATCA 1 cut(s) 228
FblI GTMKAC 1 cut(s) 317
Fnu4HI GCNGC 9 cut(s) 23, 49, 52, 542, 579, 1168, 1276, 1279, 1356
FokI GGATG 2 cut(s) 182, 323
Fsp4HI GCNGC 9 cut(s) 23, 49, 52, 542, 579, 1168, 1276, 1279, 1356
FspBI CTAG 9 cut(s) 92, 287, 348, 432, 731, 921, 1313, 1409, 1630
GlaI GCGC 5 cut(s) 26, 159, 174, 582, 729
GluI GCNGC 9 cut(s) 23, 49, 52, 542, 579, 1168, 1276, 1279, 1356
GsaI CCCAGC 1 cut(s) 1582
HaeII RGCGCY 1 cut(s) 28
HaeIII GGCC 2 cut(s) 302, 1467
HapII CCGG 1 cut(s) 308
HgaI GACGC 2 cut(s) 149, 1135
HhaI GCGC 5 cut(s) 27, 160, 175, 583, 730
Hin6I GCGC 5 cut(s) 25, 158, 173, 581, 728
HinP1I GCGC 5 cut(s) 25, 158, 173, 581, 728
HinfI GANTC 6 cut(s) 57, 199, 787, 916, 1477, 1535
HpaII CCGG 1 cut(s) 308
HphI GGTGA 3 cut(s) 383, 850, 1526
Hpy166II GTNNAC 5 cut(s) 97, 318, 627, 862, 942
Hpy188III TCNNGA 4 cut(s) 164, 1020, 1123, 1214
Hpy8I GTNNAC 5 cut(s) 97, 318, 627, 862, 942
Hpy99I CGWCG 2 cut(s) 298, 1253
HpyAV CCTTC 4 cut(s) 256, 661, 774, 1580
HpyCH4III ACNGT 5 cut(s) 101, 214, 934, 1333, 1615
HpyCH4IV ACGT 2 cut(s) 320, 1133
HpyF10VI GCNNNNNNNGC 4 cut(s) 299, 647, 1240, 1579
HpyF3I CTNAG 6 cut(s) 108, 129, 651, 1013, 1299, 1398
HpySE526I ACGT 2 cut(s) 320, 1133
HspAI GCGC 5 cut(s) 25, 158, 173, 581, 728
Ksp22I TGATCA 1 cut(s) 228
Kzo9I GATC 4 cut(s) 228, 1177, 1542, 1563
LguI GCTCTTC 1 cut(s) 996
LmnI GCTCC 3 cut(s) 45, 180, 1240
Lsp1109I GCAGC 6 cut(s) 34, 35, 63, 528, 1154, 1265
LweI GCATC 5 cut(s) 160, 565, 591, 999, 1316
MabI ACCWGGT 1 cut(s) 720
MaeI CTAG 9 cut(s) 92, 287, 348, 432, 731, 921, 1313, 1409, 1630
MaeII ACGT 2 cut(s) 320, 1133
MaeIII GTNAC 1 cut(s) 838
MalI GATC 4 cut(s) 230, 1179, 1544, 1565
MboI GATC 4 cut(s) 228, 1177, 1542, 1563
MboII GAAGA 3 cut(s) 936, 983, 1465
MhlI GDGCHC 4 cut(s) 652, 1161, 1267, 1374
MluCI AATT 3 cut(s) 87, 759, 1294
MlyI GAGTC 1 cut(s) 51
MmeI TCCRAC 2 cut(s) 512, 1454
MroXI GAANNNNTTC 1 cut(s) 990
MseI TTAA 3 cut(s) 467, 1184, 1607
MslI CAYNNNNRTG 3 cut(s) 795, 867, 1530
MspI CCGG 1 cut(s) 308
MspR9I CCNGG 3 cut(s) 494, 722, 1464
Mva1269I GAATGC 1 cut(s) 140
MvaI CCWGG 3 cut(s) 494, 722, 1464
MvnI CGCG 4 cut(s) 160, 583, 832, 978
MwoI GCNNNNNNNGC 4 cut(s) 299, 647, 1240, 1579
NdeII GATC 4 cut(s) 228, 1177, 1542, 1563
NlaIV GGNNCC 4 cut(s) 221, 1146, 1242, 1591
NmeAIII GCCGAG 1 cut(s) 328
NmuCI GTSAC 1 cut(s) 838
NspI RCATGY 2 cut(s) 868, 1285
PaeI GCATGC 1 cut(s) 1285
PaeR7I CTCGAG 1 cut(s) 164
PagI TCATGA 2 cut(s) 1122, 1213
PaqCI CACCTGC 1 cut(s) 1502
PciI ACATGT 1 cut(s) 864
PciSI GCTCTTC 1 cut(s) 996
PcsI WCGNNNNNNNCGW 1 cut(s) 629
PctI GAATGC 1 cut(s) 140
PdmI GAANNNNTTC 1 cut(s) 990
PfeI GAWTC 5 cut(s) 199, 787, 916, 1477, 1535
PkrI GCNGC 9 cut(s) 24, 50, 53, 543, 580, 1169, 1277, 1280, 1357
PleI GAGTC 1 cut(s) 51
PpsI GAGTC 1 cut(s) 51
Ppu21I YACGTR 1 cut(s) 321
PscI ACATGT 1 cut(s) 864
Psp6I CCWGG 3 cut(s) 492, 720, 1462
PspFI CCCAGC 1 cut(s) 1578
PspGI CCWGG 3 cut(s) 492, 720, 1462
PspN4I GGNNCC 4 cut(s) 221, 1146, 1242, 1591
PspPI GGNCC 2 cut(s) 718, 942
PstI CTGCAG 1 cut(s) 53
RsaI GTAC 1 cut(s) 848
RsaNI GTAC 1 cut(s) 847
RseI CAYNNNNRTG 3 cut(s) 795, 867, 1530
SapI GCTCTTC 1 cut(s) 996
SaqAI TTAA 3 cut(s) 467, 1184, 1607
SatI GCNGC 9 cut(s) 23, 49, 52, 542, 579, 1168, 1276, 1279, 1356
Sau3AI GATC 4 cut(s) 228, 1177, 1542, 1563
Sau96I GGNCC 2 cut(s) 718, 942
SchI GAGTC 1 cut(s) 51
ScrFI CCNGG 3 cut(s) 494, 722, 1464
SduI GDGCHC 4 cut(s) 652, 1161, 1267, 1374
SexAI ACCWGGT 1 cut(s) 720
SfaNI GCATC 5 cut(s) 160, 565, 591, 999, 1316
SfcI CTRYAG 1 cut(s) 49
Sfr274I CTCGAG 1 cut(s) 164
SinI GGWCC 2 cut(s) 718, 942
SlaI CTCGAG 1 cut(s) 164
SmiMI CAYNNNNRTG 3 cut(s) 795, 867, 1530
SmlI CTYRAG 1 cut(s) 164
SmoI CTYRAG 1 cut(s) 164
SnaBI TACGTA 1 cut(s) 321
SpeI ACTAGT 2 cut(s) 431, 1312
SphI GCATGC 1 cut(s) 1285
Sse9I AATT 3 cut(s) 87, 759, 1294
SsiI CCGC 8 cut(s) 266, 578, 583, 641, 832, 978, 1275, 1355
SspMI CTAG 9 cut(s) 92, 287, 348, 432, 731, 921, 1313, 1409, 1630
StyD4I CCNGG 3 cut(s) 492, 720, 1462
StyI CCWWGG 3 cut(s) 1057, 1148, 1270
TaaI ACNGT 5 cut(s) 101, 214, 934, 1333, 1615
TaiI ACGT 2 cut(s) 323, 1136
TaqI TCGA 4 cut(s) 165, 665, 1176, 1485
TasI AATT 3 cut(s) 87, 759, 1294
TatI WGTACW 1 cut(s) 846
TauI GCSGC 3 cut(s) 581, 1278, 1358
TfiI GAWTC 5 cut(s) 199, 787, 916, 1477, 1535
Tru1I TTAA 3 cut(s) 467, 1184, 1607
Tru9I TTAA 3 cut(s) 467, 1184, 1607
TscAI CASTG 2 cut(s) 217, 937
TseFI GTSAC 1 cut(s) 838
TseI GCWGC 6 cut(s) 22, 48, 51, 541, 1167, 1278
Tsp45I GTSAC 1 cut(s) 838
TspGWI ACGGA 3 cut(s) 58, 311, 1266
TspRI CASTG 2 cut(s) 217, 937
VpaK11BI GGWCC 2 cut(s) 718, 942
XapI RAATTY 2 cut(s) 87, 1294
XceI RCATGY 2 cut(s) 868, 1285
XcmI CCANNNNNNNNNTGG 1 cut(s) 1470
XhoI CTCGAG 1 cut(s) 164
XmiI GTMKAC 1 cut(s) 317
XmnI GAANNNNTTC 1 cut(s) 990
XspI CTAG 9 cut(s) 92, 287, 348, 432, 731, 921, 1313, 1409, 1630
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.