RchiOBHm_Chr7g0181891

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
OG0016849
Physical Location & Seq
Forward (+)
3374652 .. 3376512
1861 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ16224

Sequence Viewer

Length: 1680 bp
ATGGATTTGAAAAGTATAGTTTGCGATTTAAAGGACTACCTTAAACCCCCAACCTCCTCGTCCTCCTCCTCTAGAGCTTTAGAGCAGCGCCTCTTCCATCTATTGCAGAGCTGCAACACACTCCGAAATCTGACCCAAATTCATACACAGATAGTGGTCCATGGATTCACCCAAAAAAGCTATATTCTTTCTAAGGTACTAGCGTTGTATGTAGGTTGTGGGTGTCTTGATAATGCGCTGAGAGTTTTCGGGAATGTGAAGAGTCCGAGTACTACTGTGTGGAACCAGATAATCAGAGGGTATGCTGGCAGCGAAACTCCGGGGAAGGCGGTTGAGTTGTATAACAGGCTGGCGGCGACGGAAGCCGAGCCGGATGGGTATACGTATTCGTATGTTGTTAGTGCCTGTGCTAGGTCAGGGATGGTTAGAGAGGGGGAGCAGTTGCATGGGAGAGTTTTGGGTGGTGGGTTTGGTTCTAATGTGTTTGTTCAGACCAGTTTGGTTAGTTTGTATGCAGGTGGTGGTGTTGAGTGCGCGCGCAAGGTGTTTGATGAAATGCGTGAGAGGAGTGTTGTCAGTTGGAATACGCTGCTTTCGGGGTATGTGAGGAGCCGGGATTTTGATGGGGCGCGGCGAGTTTTTGATGAGATGCCGGAGAGGAATGTGGTGTCGTGGACGACAATGATTGCGGGGTGTGCTCAGAATGGGAGGTGCAAGGAAGCTTTGAGTTTGTTTGGGCGGATGAGGAAGGCGGATGTGGAACCGGACCAGGTTGCGCTAGTGGCGGTGTTATCGGCCTGTGCTGAAATTGGGGACTTGAGATTGGGAAGGTGGGTTCACTGGTACGTTGAAGAGGGATTGTGTGTTAGAGCTAAGTCGCGGTTGGTGACTGTGTACAATGCACTCATACATATGTACGCCAGTTGTGGTTTGGTTGATGAAGCGTATAAGGTGTTCAAGCAGATGCCTAGAAGGAGCACTGTCTCGTGGACAAGCATCATAGTTGGGTTCGCAAAGCAGGGTCGCGGGGAGGAAGCTCTTCGAATATTTCAATTGATGCTGAGCTCGGAACTTGATGATGTAAGACCCGATGAAATTACTTTCCTTGGGGTGTTGTGTGCCTGTAGCCATGCTGGATTAGTTGATGAGGGCCGGAGACTTTTCAAGTTCATGACGCAGACTTGGGGACTCGAACCAAGGATTGAGCACTATGGCTGCATGGTCGATCTATTAAGCCGTGCTGGTTTTTTAAATGAAGCTCATGTACTTGTGGAGACTATGCCAATGGAGCCAAATGACGCTGTGTGGGGTGCTCTCCTCGGCGGTTGCATGCTTCACAAGAATTCTGAGCTTGCATCACTTGCAGCTCAAAAGTTAACAGTTGCACTTGACCCTGACCAAGCCGCAGGGTATCTTGTGCTCTTATCGAATGTGTATGCTTCTGCTAAAAGATGGCTAGATGTTGCTTATGTGAGACAGAAAATGGTTCACGTGGGCGTGAAGAAGCCTCCAGGTCGAAGTTGGGTTCAAATCAATGGAGCTGTTCATGGTTTTGTGGCAGGTGATAGGACCCATAAACATGAATCTTTGATCTATGAAATGGTTGGCGAGATCACAAGGCAAGCCCAGCAAGAAGGCCGCGAACCAGGCACATTAAACATGCTTTCCCTTGAAGAATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PPR PPR_2

Protein Analysis

559

Amino Acids

61.96

Weight (kDa)

7.86

Isoelectric Point (pI)

42.04

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 89 - 138 7.8e-07 PPR repeat family
PPR_2 PF13041 190 - 222 6.5e-08 PPR repeat family
PPR PF01535 192 - 222 6.5e-08 PPR repeat
PPR_2 PF13041 220 - 268 2.4e-10 PPR repeat family
PPR PF01535 223 - 252 4.4e-09 PPR repeat
PPR_2 PF13041 296 - 326 5e-06 PPR repeat family
PPR PF01535 298 - 325 3.9e-07 PPR repeat
PPR_1 PF12854 298 - 322 2e-06 PPR repeat
PPR_2 PF13041 326 - 376 2.1e-06 PPR repeat family
PPR PF01535 328 - 356 5.2e-06 PPR repeat
E_motif PF20431 446 - 510 2.8e-16 E motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0016849)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g14600
malus_domestica MD06G1197100.v1.1
prunus_persica Prupe.5G197400_v2.0.a1
pyrus_communis pycom06g17390
rosa_chinensis RchiOBHm_Chr7g0181891
rosa_laevigata RLG00000005165
rosa_multiflora Rmu_co8431917.1_g000001 Rmu_sc0021327.1_g000007
rosa_roxburghii Rroxscaffold_3G00271660
rosa_rugosa Rorug06G0444800
rosa_samantha Rh7AG047100 Rh7BG046700 Rh7CG047200
rosa_wichuraiana Rw7G003900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 506, 1550
Acc36I ACCTGC 2 cut(s) 506, 1550
AccI GTMKAC 1 cut(s) 380
AccII CGCG 6 cut(s) 536, 538, 631, 880, 1026, 1641
AcsI RAATTY 2 cut(s) 138, 1342
AcvI CACGTG 1 cut(s) 1492
AfaI GTAC 6 cut(s) 198, 271, 845, 896, 917, 1266
AfiI CCNNNNNNNGG 1 cut(s) 411
AgsI TTSAA 7 cut(s) 10, 851, 958, 1052, 1165, 1529, 1673
AjnI CCWGG 3 cut(s) 768, 1510, 1645
AloI GAACNNNNNNTCC 2 cut(s) 819, 851
Alw21I GWGCWC 6 cut(s) 700, 980, 1067, 1209, 1315, 1422
Alw26I GTCTC 4 cut(s) 988, 1150, 1268, 1468
AoxI GGCC 3 cut(s) 795, 1150, 1636
ApeKI GCWGC 6 cut(s) 85, 111, 309, 589, 1215, 1364
ApoI RAATTY 2 cut(s) 138, 1342
Asp700I GAANNNNTTC 1 cut(s) 1038
AspLEI GCGC 7 cut(s) 90, 238, 536, 538, 540, 631, 778
AspS9I GGNCC 4 cut(s) 157, 766, 1150, 1569
AsuC2I CCSGG 2 cut(s) 321, 614
AsuHPI GGTGA 3 cut(s) 160, 898, 1574
AsuII TTCGAA 1 cut(s) 1042
AvaII GGWCC 3 cut(s) 157, 766, 1569
BaeI ACNNNNGTAYC 2 cut(s) 188, 221
BanII GRGCYC 1 cut(s) 1067
BarI GAAGNNNNNNTAC 2 cut(s) 1248, 1280
BauI CACGAG 1 cut(s) 985
BbrPI CACGTG 1 cut(s) 1492
Bbv12I GWGCWC 6 cut(s) 700, 980, 1067, 1209, 1315, 1422
BbvI GCAGC 6 cut(s) 97, 98, 321, 576, 1202, 1376
BccI CCATC 5 cut(s) 105, 368, 415, 617, 1446
BceAI ACGGC 1 cut(s) 1221
BciT130I CCWGG 3 cut(s) 770, 1512, 1647
BcnI CCSGG 2 cut(s) 321, 614
BcoDI GTCTC 4 cut(s) 988, 1150, 1268, 1468
BfaI CTAG 6 cut(s) 72, 200, 411, 779, 969, 1457
BfmI CTRYAG 1 cut(s) 1123
BfoI RGCGCY 1 cut(s) 91
BfuAI ACCTGC 2 cut(s) 506, 1550
BlpI GCTNAGC 1 cut(s) 1061
BmcAI AGTACT 1 cut(s) 271
Bme1390I CCNGG 5 cut(s) 321, 614, 770, 1512, 1647
Bme18I GGWCC 3 cut(s) 157, 766, 1569
BmgT120I GGNCC 4 cut(s) 157, 766, 1150, 1569
BmiI GGNNCC 5 cut(s) 284, 611, 762, 1290, 1571
BmrFI CCNGG 5 cut(s) 321, 614, 770, 1512, 1647
BmsI GCATC 5 cut(s) 639, 954, 1005, 1047, 1364
BpmI CTGGAG 1 cut(s) 1494
Bpu1102I GCTNAGC 1 cut(s) 1061
Bpu14I TTCGAA 1 cut(s) 1042
BpuEI CTTGAG 1 cut(s) 838
BpuMI CCSGG 2 cut(s) 321, 614
BsaAI YACGTR 2 cut(s) 384, 1492
BsaJI CCNNGG 5 cut(s) 160, 320, 1105, 1196, 1318
BsaWI WCCGGW 1 cut(s) 763
Bsc4I CCNNNNNNNGG 1 cut(s) 411
Bse1I ACTGG 3 cut(s) 495, 845, 921
BseBI CCWGG 3 cut(s) 770, 1512, 1647
BseDI CCNNGG 5 cut(s) 160, 320, 1105, 1196, 1318
BseGI GGATG 4 cut(s) 379, 426, 747, 760
BseLI CCNNNNNNNGG 1 cut(s) 411
BseMII CTCAG 4 cut(s) 230, 713, 1052, 1338
BseNI ACTGG 3 cut(s) 495, 845, 921
BsePI GCGCGC 2 cut(s) 534, 536
BseRI GAGGAG 6 cut(s) 46, 55, 58, 580, 622, 1307
BseXI GCAGC 6 cut(s) 97, 98, 321, 576, 1202, 1376
BseYI CCCAGC 1 cut(s) 1626
Bsh1236I CGCG 6 cut(s) 536, 538, 631, 880, 1026, 1641
BshFI GGCC 3 cut(s) 797, 1152, 1638
BsiHKAI GWGCWC 6 cut(s) 700, 980, 1067, 1209, 1315, 1422
BsiSI CCGG 6 cut(s) 320, 371, 613, 653, 764, 1153
BslFI GGGAC 2 cut(s) 827, 1200
BslI CCNNNNNNNGG 1 cut(s) 411
BsmAI GTCTC 4 cut(s) 988, 1150, 1268, 1468
BsmFI GGGAC 2 cut(s) 827, 1200
BsnI GGCC 3 cut(s) 797, 1152, 1638
Bsp119I TTCGAA 1 cut(s) 1042
Bsp1286I GDGCHC 6 cut(s) 700, 980, 1067, 1209, 1315, 1422
Bsp1407I TGTACA 1 cut(s) 894
Bsp143I GATC 3 cut(s) 1225, 1590, 1611
Bsp1720I GCTNAGC 1 cut(s) 1061
Bsp19I CCATGG 1 cut(s) 160
BspANI GGCC 3 cut(s) 797, 1152, 1638
BspCNI CTCAG 4 cut(s) 231, 712, 1053, 1339
BspFNI CGCG 6 cut(s) 536, 538, 631, 880, 1026, 1641
BspHI TCATGA 1 cut(s) 1170
BspLI GGNNCC 5 cut(s) 284, 611, 762, 1290, 1571
BspMI ACCTGC 2 cut(s) 506, 1550
BspQI GCTCTTC 1 cut(s) 1044
BspT104I TTCGAA 1 cut(s) 1042
BsrGI TGTACA 1 cut(s) 894
BsrI ACTGG 3 cut(s) 495, 845, 921
BssECI CCNNGG 5 cut(s) 160, 320, 1105, 1196, 1318
BssHII GCGCGC 2 cut(s) 534, 536
BssMI GATC 3 cut(s) 1225, 1590, 1611
BssNAI GTATAC 1 cut(s) 381
BssSI CACGAG 1 cut(s) 985
BssT1I CCWWGG 3 cut(s) 160, 1105, 1196
Bst1107I GTATAC 1 cut(s) 381
Bst2BI CACGAG 1 cut(s) 985
Bst2UI CCWGG 3 cut(s) 770, 1512, 1647
Bst4CI ACNGT 4 cut(s) 277, 892, 982, 1381
Bst6I CTCTTC 4 cut(s) 98, 254, 846, 1044
BstAPI GCANNNNNTGC 1 cut(s) 1361
BstAUI TGTACA 1 cut(s) 894
BstBAI YACGTR 2 cut(s) 384, 1492
BstBI TTCGAA 1 cut(s) 1042
BstC8I GCNNGC 7 cut(s) 307, 351, 536, 538, 1331, 1353, 1623
BstDEI CTNAG 6 cut(s) 192, 239, 699, 873, 1061, 1347
BstDSI CCRYGG 1 cut(s) 160
BstENI CCTNNNNNAGG 1 cut(s) 409
BstF5I GGATG 4 cut(s) 379, 426, 747, 760
BstFNI CGCG 6 cut(s) 536, 538, 631, 880, 1026, 1641
BstH2I RGCGCY 1 cut(s) 91
BstHHI GCGC 7 cut(s) 90, 238, 536, 538, 540, 631, 778
BstKTI GATC 3 cut(s) 1228, 1593, 1614
BstMAI GTCTC 4 cut(s) 988, 1150, 1268, 1468
BstMBI GATC 3 cut(s) 1225, 1590, 1611
BstMWI GCNNNNNNNGC 7 cut(s) 362, 695, 782, 1288, 1361, 1627, 1647
BstNI CCWGG 3 cut(s) 770, 1512, 1647
BstNSI RCATGY 2 cut(s) 1333, 1663
BstSCI CCNGG 5 cut(s) 319, 612, 768, 1510, 1645
BstSFI CTRYAG 1 cut(s) 1123
BstSNI TACGTA 1 cut(s) 384
BstUI CGCG 6 cut(s) 536, 538, 631, 880, 1026, 1641
BstV1I GCAGC 6 cut(s) 97, 98, 321, 576, 1202, 1376
BstZ17I GTATAC 1 cut(s) 381
BsuRI GGCC 3 cut(s) 797, 1152, 1638
BtgI CCRYGG 1 cut(s) 160
BtsCI GGATG 4 cut(s) 379, 426, 747, 760
BtsIMutI CAGTG 2 cut(s) 838, 978
BveI ACCTGC 2 cut(s) 506, 1550
Cac8I GCNNGC 7 cut(s) 307, 351, 536, 538, 1331, 1353, 1623
CciI TCATGA 1 cut(s) 1170
CfoI GCGC 7 cut(s) 90, 238, 536, 538, 540, 631, 778
Cfr13I GGNCC 4 cut(s) 157, 766, 1150, 1569
CseI GACGC 2 cut(s) 1183, 1307
CsiI ACCWGGT 1 cut(s) 768
Csp6I GTAC 6 cut(s) 197, 270, 844, 895, 916, 1265
CviQI GTAC 6 cut(s) 197, 270, 844, 895, 916, 1265
DdeI CTNAG 6 cut(s) 192, 239, 699, 873, 1061, 1347
DpnI GATC 3 cut(s) 1227, 1592, 1613
DpnII GATC 3 cut(s) 1225, 1590, 1611
DraI TTTAAA 2 cut(s) 30, 1251
Eam1104I CTCTTC 4 cut(s) 98, 254, 846, 1044
EarI CTCTTC 4 cut(s) 98, 254, 846, 1044
EciI GGCGGA 2 cut(s) 754, 767
Ecl136II GAGCTC 1 cut(s) 1065
Eco105I TACGTA 1 cut(s) 384
Eco130I CCWWGG 3 cut(s) 160, 1105, 1196
Eco24I GRGCYC 1 cut(s) 1067
Eco47I GGWCC 3 cut(s) 157, 766, 1569
Eco53kI GAGCTC 1 cut(s) 1065
Eco72I CACGTG 1 cut(s) 1492
EcoICRI GAGCTC 1 cut(s) 1065
EcoNI CCTNNNNNAGG 1 cut(s) 409
EcoO109I RGGNCCY 1 cut(s) 1569
EcoRI GAATTC 1 cut(s) 1342
EcoRII CCWGG 3 cut(s) 768, 1510, 1645
EcoT14I CCWWGG 3 cut(s) 160, 1105, 1196
EcoT38I GRGCYC 1 cut(s) 1067
ErhI CCWWGG 3 cut(s) 160, 1105, 1196
FaqI GGGAC 2 cut(s) 827, 1200
FauI CCCGC 2 cut(s) 682, 1019
FauNDI CATATG 1 cut(s) 912
FblI GTMKAC 1 cut(s) 380
FokI GGATG 4 cut(s) 386, 433, 754, 767
FriOI GRGCYC 1 cut(s) 1067
FspBI CTAG 6 cut(s) 72, 200, 411, 779, 969, 1457
GlaI GCGC 7 cut(s) 89, 237, 535, 537, 539, 630, 777
GsaI CCCAGC 1 cut(s) 1630
GsuI CTGGAG 1 cut(s) 1494
HaeII RGCGCY 1 cut(s) 91
HaeIII GGCC 3 cut(s) 797, 1152, 1638
HapII CCGG 6 cut(s) 320, 371, 613, 653, 764, 1153
HgaI GACGC 2 cut(s) 1183, 1307
HhaI GCGC 7 cut(s) 90, 238, 536, 538, 540, 631, 778
Hin6I GCGC 7 cut(s) 88, 236, 534, 536, 538, 629, 776
HinP1I GCGC 7 cut(s) 88, 236, 534, 536, 538, 629, 776
HincII GTYRAC 1 cut(s) 1377
HindII GTYRAC 1 cut(s) 1377
HindIII AAGCTT 1 cut(s) 720
HinfI GANTC 4 cut(s) 165, 262, 1188, 1583
HpaI GTTAAC 1 cut(s) 1377
HpaII CCGG 6 cut(s) 320, 371, 613, 653, 764, 1153
HphI GGTGA 3 cut(s) 160, 898, 1574
Hpy166II GTNNAC 7 cut(s) 381, 675, 838, 895, 990, 1377, 1489
Hpy188I TCNGA 8 cut(s) 125, 132, 267, 296, 492, 702, 1069, 1348
Hpy188III TCNNGA 4 cut(s) 72, 227, 250, 1171
Hpy8I GTNNAC 7 cut(s) 381, 675, 838, 895, 990, 1377, 1489
Hpy99I CGWCG 1 cut(s) 361
HpyAV CCTTC 5 cut(s) 319, 742, 822, 966, 1628
HpyCH4III ACNGT 4 cut(s) 277, 892, 982, 1381
HpyCH4IV ACGT 3 cut(s) 383, 846, 1491
HpyF10VI GCNNNNNNNGC 7 cut(s) 362, 695, 782, 1288, 1361, 1627, 1647
HpyF3I CTNAG 6 cut(s) 192, 239, 699, 873, 1061, 1347
HpySE526I ACGT 3 cut(s) 383, 846, 1491
HspAI GCGC 7 cut(s) 88, 236, 534, 536, 538, 629, 776
KspAI GTTAAC 1 cut(s) 1377
Kzo9I GATC 3 cut(s) 1225, 1590, 1611
LguI GCTCTTC 1 cut(s) 1044
LmnI GCTCC 5 cut(s) 436, 609, 975, 1288, 1538
Lsp1109I GCAGC 6 cut(s) 97, 98, 321, 576, 1202, 1376
LweI GCATC 5 cut(s) 639, 954, 1005, 1047, 1364
MabI ACCWGGT 1 cut(s) 768
MaeI CTAG 6 cut(s) 72, 200, 411, 779, 969, 1457
MaeII ACGT 3 cut(s) 383, 846, 1491
MaeIII GTNAC 1 cut(s) 886
MalI GATC 3 cut(s) 1227, 1592, 1613
MboI GATC 3 cut(s) 1225, 1590, 1611
MboII GAAGA 5 cut(s) 85, 271, 863, 1031, 1513
MfeI CAATTG 1 cut(s) 1052
MhlI GDGCHC 6 cut(s) 700, 980, 1067, 1209, 1315, 1422
MluCI AATT 5 cut(s) 138, 807, 1052, 1095, 1342
MlyI GAGTC 2 cut(s) 271, 1182
MmeI TCCRAC 1 cut(s) 560
MroXI GAANNNNTTC 1 cut(s) 1038
MseI TTAA 6 cut(s) 29, 42, 1232, 1250, 1376, 1655
MslI CAYNNNNRTG 2 cut(s) 911, 1578
MspI CCGG 6 cut(s) 320, 371, 613, 653, 764, 1153
MspR9I CCNGG 5 cut(s) 321, 614, 770, 1512, 1647
MunI CAATTG 1 cut(s) 1052
MvaI CCWGG 3 cut(s) 770, 1512, 1647
MvnI CGCG 6 cut(s) 536, 538, 631, 880, 1026, 1641
MwoI GCNNNNNNNGC 7 cut(s) 362, 695, 782, 1288, 1361, 1627, 1647
NciI CCSGG 2 cut(s) 321, 614
NcoI CCATGG 1 cut(s) 160
NdeI CATATG 1 cut(s) 912
NdeII GATC 3 cut(s) 1225, 1590, 1611
NlaIV GGNNCC 5 cut(s) 284, 611, 762, 1290, 1571
NmeAIII GCCGAG 2 cut(s) 391, 1299
NmuCI GTSAC 1 cut(s) 886
NspI RCATGY 2 cut(s) 1333, 1663
NspV TTCGAA 1 cut(s) 1042
PaeI GCATGC 1 cut(s) 1333
PagI TCATGA 1 cut(s) 1170
PaqCI CACCTGC 2 cut(s) 506, 1550
PauI GCGCGC 2 cut(s) 534, 536
PciSI GCTCTTC 1 cut(s) 1044
PdmI GAANNNNTTC 1 cut(s) 1038
PfeI GAWTC 2 cut(s) 165, 1583
PleI GAGTC 2 cut(s) 270, 1182
PmaCI CACGTG 1 cut(s) 1492
PmlI CACGTG 1 cut(s) 1492
PpsI GAGTC 2 cut(s) 270, 1182
Ppu21I YACGTR 2 cut(s) 384, 1492
PpuMI RGGWCCY 1 cut(s) 1569
Psp124BI GAGCTC 1 cut(s) 1067
Psp5II RGGWCCY 1 cut(s) 1569
Psp6I CCWGG 3 cut(s) 768, 1510, 1645
PspCI CACGTG 1 cut(s) 1492
PspFI CCCAGC 1 cut(s) 1626
PspGI CCWGG 3 cut(s) 768, 1510, 1645
PspN4I GGNNCC 5 cut(s) 284, 611, 762, 1290, 1571
PspPI GGNCC 4 cut(s) 157, 766, 1150, 1569
PspPPI RGGWCCY 1 cut(s) 1569
PsrI GAACNNNNNNTAC 2 cut(s) 938, 970
PteI GCGCGC 2 cut(s) 534, 536
RsaI GTAC 6 cut(s) 198, 271, 845, 896, 917, 1266
RsaNI GTAC 6 cut(s) 197, 270, 844, 895, 916, 1265
RseI CAYNNNNRTG 2 cut(s) 911, 1578
SacI GAGCTC 1 cut(s) 1067
SapI GCTCTTC 1 cut(s) 1044
SaqAI TTAA 6 cut(s) 29, 42, 1232, 1250, 1376, 1655
Sau3AI GATC 3 cut(s) 1225, 1590, 1611
Sau96I GGNCC 4 cut(s) 157, 766, 1150, 1569
ScaI AGTACT 1 cut(s) 271
SchI GAGTC 2 cut(s) 271, 1182
ScrFI CCNGG 5 cut(s) 321, 614, 770, 1512, 1647
SduI GDGCHC 6 cut(s) 700, 980, 1067, 1209, 1315, 1422
SexAI ACCWGGT 1 cut(s) 768
SfaNI GCATC 5 cut(s) 639, 954, 1005, 1047, 1364
SfcI CTRYAG 1 cut(s) 1123
SfuI TTCGAA 1 cut(s) 1042
SinI GGWCC 3 cut(s) 157, 766, 1569
SmiMI CAYNNNNRTG 2 cut(s) 911, 1578
SmlI CTYRAG 1 cut(s) 817
SmoI CTYRAG 1 cut(s) 817
SnaBI TACGTA 1 cut(s) 384
SphI GCATGC 1 cut(s) 1333
Sse9I AATT 5 cut(s) 138, 807, 1052, 1095, 1342
SspI AATATT 1 cut(s) 1047
SspMI CTAG 6 cut(s) 72, 200, 411, 779, 969, 1457
SstI GAGCTC 1 cut(s) 1067
StyD4I CCNGG 5 cut(s) 319, 612, 768, 1510, 1645
StyI CCWWGG 3 cut(s) 160, 1105, 1196
TaaI ACNGT 4 cut(s) 277, 892, 982, 1381
TaiI ACGT 3 cut(s) 386, 849, 1494
TaqI TCGA 5 cut(s) 1042, 1191, 1224, 1427, 1516
TasI AATT 5 cut(s) 138, 807, 1052, 1095, 1342
TatI WGTACW 3 cut(s) 269, 894, 1264
TauI GCSGC 4 cut(s) 356, 634, 1406, 1641
TfiI GAWTC 2 cut(s) 165, 1583
Tru1I TTAA 6 cut(s) 29, 42, 1232, 1250, 1376, 1655
Tru9I TTAA 6 cut(s) 29, 42, 1232, 1250, 1376, 1655
TscAI CASTG 2 cut(s) 845, 985
TseFI GTSAC 1 cut(s) 886
TseI GCWGC 6 cut(s) 85, 111, 309, 589, 1215, 1364
Tsp45I GTSAC 1 cut(s) 886
TspDTI ATGAA 9 cut(s) 131, 567, 954, 1107, 1159, 1269, 1535, 1596, 1611
TspGWI ACGGA 1 cut(s) 374
TspRI CASTG 2 cut(s) 845, 985
VpaK11BI GGWCC 3 cut(s) 157, 766, 1569
XagI CCTNNNNNAGG 1 cut(s) 409
XapI RAATTY 2 cut(s) 138, 1342
XbaI TCTAGA 1 cut(s) 71
XceI RCATGY 2 cut(s) 1333, 1663
XcmI CCANNNNNNNNNTGG 2 cut(s) 928, 1518
XmiI GTMKAC 1 cut(s) 380
XmnI GAANNNNTTC 1 cut(s) 1038
XspI CTAG 6 cut(s) 72, 200, 411, 779, 969, 1457
ZrmI AGTACT 1 cut(s) 271
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.