Pentatricopeptide repeat-containing protein
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| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_5g14600 |
| malus_domestica | MD06G1197100.v1.1 |
| prunus_persica | Prupe.5G197400_v2.0.a1 |
| pyrus_communis | pycom06g17390 |
| rosa_chinensis | RchiOBHm_Chr7g0181891 |
| rosa_laevigata | RLG00000005165 |
| rosa_multiflora | Rmu_co8431917.1_g000001 Rmu_sc0021327.1_g000007 |
| rosa_roxburghii | Rroxscaffold_3G00271660 |
| rosa_rugosa | Rorug06G0444800 |
| rosa_samantha | Rh7AG047100 Rh7BG046700 Rh7CG047200 |
| rosa_wichuraiana | Rw7G003900 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 2 cut(s) | 377, 1421 |
| Acc36I | ACCTGC | 2 cut(s) | 377, 1421 |
| AccI | GTMKAC | 1 cut(s) | 251 |
| AccII | CGCG | 5 cut(s) | 407, 409, 502, 751, 1512 |
| AcsI | RAATTY | 3 cut(s) | 9, 1213, 1243 |
| AcvI | CACGTG | 1 cut(s) | 1363 |
| AfaI | GTAC | 5 cut(s) | 69, 142, 716, 767, 788 |
| AgsI | TTSAA | 6 cut(s) | 722, 829, 923, 1036, 1400, 1544 |
| AjnI | CCWGG | 2 cut(s) | 639, 1381 |
| AloI | GAACNNNNNNTCC | 2 cut(s) | 690, 722 |
| AluBI | AGCT | 9 cut(s) | 51, 593, 743, 908, 936, 1130, 1222, 1238, 1412 |
| AluI | AGCT | 9 cut(s) | 51, 593, 743, 908, 936, 1130, 1222, 1238, 1412 |
| Alw21I | GWGCWC | 6 cut(s) | 571, 851, 938, 1080, 1186, 1293 |
| Alw26I | GTCTC | 3 cut(s) | 859, 1139, 1339 |
| AoxI | GGCC | 2 cut(s) | 666, 1507 |
| ApeKI | GCWGC | 4 cut(s) | 180, 460, 1086, 1235 |
| ApoI | RAATTY | 3 cut(s) | 9, 1213, 1243 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 909 |
| AspLEI | GCGC | 7 cut(s) | 109, 281, 407, 409, 411, 502, 649 |
| AspS9I | GGNCC | 1 cut(s) | 637 |
| AsuC2I | CCSGG | 2 cut(s) | 192, 485 |
| AsuHPI | GGTGA | 4 cut(s) | 31, 238, 769, 1445 |
| AsuII | TTCGAA | 1 cut(s) | 913 |
| AvaII | GGWCC | 1 cut(s) | 637 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 59, 92 |
| BanII | GRGCYC | 1 cut(s) | 938 |
| BauI | CACGAG | 1 cut(s) | 856 |
| BbrPI | CACGTG | 1 cut(s) | 1363 |
| Bbv12I | GWGCWC | 6 cut(s) | 571, 851, 938, 1080, 1186, 1293 |
| BbvI | GCAGC | 4 cut(s) | 192, 447, 1073, 1247 |
| BccI | CCATC | 4 cut(s) | 239, 286, 488, 1317 |
| BceAI | ACGGC | 1 cut(s) | 1092 |
| BciT130I | CCWGG | 2 cut(s) | 641, 1383 |
| BcnI | CCSGG | 2 cut(s) | 192, 485 |
| BcoDI | GTCTC | 3 cut(s) | 859, 1139, 1339 |
| BfaI | CTAG | 6 cut(s) | 71, 282, 650, 840, 1328, 1549 |
| BfmI | CTRYAG | 1 cut(s) | 994 |
| BfuAI | ACCTGC | 2 cut(s) | 377, 1421 |
| BisI | GCNGC | 7 cut(s) | 181, 461, 503, 1087, 1236, 1275, 1510 |
| BlpI | GCTNAGC | 1 cut(s) | 932 |
| BlsI | GCNGC | 7 cut(s) | 182, 462, 504, 1088, 1237, 1276, 1511 |
| BmcAI | AGTACT | 1 cut(s) | 142 |
| Bme1390I | CCNGG | 4 cut(s) | 192, 485, 641, 1383 |
| Bme18I | GGWCC | 1 cut(s) | 637 |
| BmgT120I | GGNCC | 1 cut(s) | 637 |
| BmiI | GGNNCC | 4 cut(s) | 155, 482, 633, 1161 |
| BmrFI | CCNGG | 4 cut(s) | 192, 485, 641, 1383 |
| BmsI | GCATC | 5 cut(s) | 510, 825, 876, 918, 1235 |
| BpmI | CTGGAG | 1 cut(s) | 1365 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 932 |
| Bpu14I | TTCGAA | 1 cut(s) | 913 |
| BpuEI | CTTGAG | 1 cut(s) | 709 |
| BpuMI | CCSGG | 2 cut(s) | 192, 485 |
| BsaAI | YACGTR | 2 cut(s) | 255, 1363 |
| BsaJI | CCNNGG | 5 cut(s) | 31, 191, 976, 1067, 1189 |
| BsaWI | WCCGGW | 1 cut(s) | 634 |
| Bse1I | ACTGG | 3 cut(s) | 366, 716, 792 |
| BseBI | CCWGG | 2 cut(s) | 641, 1383 |
| BseDI | CCNNGG | 5 cut(s) | 31, 191, 976, 1067, 1189 |
| BseGI | GGATG | 4 cut(s) | 250, 297, 618, 631 |
| BseMII | CTCAG | 4 cut(s) | 101, 584, 923, 1209 |
| BseNI | ACTGG | 3 cut(s) | 366, 716, 792 |
| BsePI | GCGCGC | 2 cut(s) | 405, 407 |
| BseRI | GAGGAG | 3 cut(s) | 451, 493, 1178 |
| BseXI | GCAGC | 4 cut(s) | 192, 447, 1073, 1247 |
| BseYI | CCCAGC | 1 cut(s) | 1497 |
| Bsh1236I | CGCG | 5 cut(s) | 407, 409, 502, 751, 1512 |
| BshFI | GGCC | 2 cut(s) | 668, 1509 |
| BsiHKAI | GWGCWC | 6 cut(s) | 571, 851, 938, 1080, 1186, 1293 |
| BsiSI | CCGG | 5 cut(s) | 191, 242, 484, 524, 635 |
| BslFI | GGGAC | 2 cut(s) | 698, 1071 |
| BsmAI | GTCTC | 3 cut(s) | 859, 1139, 1339 |
| BsmFI | GGGAC | 2 cut(s) | 698, 1071 |
| BsnI | GGCC | 2 cut(s) | 668, 1509 |
| Bsp119I | TTCGAA | 1 cut(s) | 913 |
| Bsp1286I | GDGCHC | 6 cut(s) | 571, 851, 938, 1080, 1186, 1293 |
| Bsp1407I | TGTACA | 1 cut(s) | 765 |
| Bsp143I | GATC | 3 cut(s) | 1096, 1461, 1482 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 932 |
| Bsp19I | CCATGG | 1 cut(s) | 31 |
| BspANI | GGCC | 2 cut(s) | 668, 1509 |
| BspCNI | CTCAG | 4 cut(s) | 102, 583, 924, 1210 |
| BspFNI | CGCG | 5 cut(s) | 407, 409, 502, 751, 1512 |
| BspHI | TCATGA | 1 cut(s) | 1041 |
| BspLI | GGNNCC | 4 cut(s) | 155, 482, 633, 1161 |
| BspMI | ACCTGC | 2 cut(s) | 377, 1421 |
| BspQI | GCTCTTC | 1 cut(s) | 915 |
| BspT104I | TTCGAA | 1 cut(s) | 913 |
| BsrGI | TGTACA | 1 cut(s) | 765 |
| BsrI | ACTGG | 3 cut(s) | 366, 716, 792 |
| BssECI | CCNNGG | 5 cut(s) | 31, 191, 976, 1067, 1189 |
| BssHII | GCGCGC | 2 cut(s) | 405, 407 |
| BssMI | GATC | 3 cut(s) | 1096, 1461, 1482 |
| BssNAI | GTATAC | 1 cut(s) | 252 |
| BssSI | CACGAG | 1 cut(s) | 856 |
| BssT1I | CCWWGG | 3 cut(s) | 31, 976, 1067 |
| Bst1107I | GTATAC | 1 cut(s) | 252 |
| Bst2BI | CACGAG | 1 cut(s) | 856 |
| Bst2UI | CCWGG | 2 cut(s) | 641, 1383 |
| Bst4CI | ACNGT | 3 cut(s) | 148, 853, 1252 |
| Bst6I | CTCTTC | 3 cut(s) | 125, 717, 915 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1232 |
| BstAUI | TGTACA | 1 cut(s) | 765 |
| BstBAI | YACGTR | 2 cut(s) | 255, 1363 |
| BstBI | TTCGAA | 1 cut(s) | 913 |
| BstC8I | GCNNGC | 8 cut(s) | 178, 222, 277, 407, 409, 1202, 1224, 1494 |
| BstDEI | CTNAG | 6 cut(s) | 63, 110, 570, 744, 932, 1218 |
| BstDSI | CCRYGG | 1 cut(s) | 31 |
| BstF5I | GGATG | 4 cut(s) | 250, 297, 618, 631 |
| BstFNI | CGCG | 5 cut(s) | 407, 409, 502, 751, 1512 |
| BstHHI | GCGC | 7 cut(s) | 109, 281, 407, 409, 411, 502, 649 |
| BstKTI | GATC | 3 cut(s) | 1099, 1464, 1485 |
| BstMAI | GTCTC | 3 cut(s) | 859, 1139, 1339 |
| BstMBI | GATC | 3 cut(s) | 1096, 1461, 1482 |
| BstMWI | GCNNNNNNNGC | 5 cut(s) | 566, 653, 1159, 1232, 1498 |
| BstNI | CCWGG | 2 cut(s) | 641, 1383 |
| BstNSI | RCATGY | 1 cut(s) | 1204 |
| BstSCI | CCNGG | 4 cut(s) | 190, 483, 639, 1381 |
| BstSFI | CTRYAG | 1 cut(s) | 994 |
| BstSNI | TACGTA | 1 cut(s) | 255 |
| BstUI | CGCG | 5 cut(s) | 407, 409, 502, 751, 1512 |
| BstV1I | GCAGC | 4 cut(s) | 192, 447, 1073, 1247 |
| BstZ17I | GTATAC | 1 cut(s) | 252 |
| BsuRI | GGCC | 2 cut(s) | 668, 1509 |
| BtgI | CCRYGG | 1 cut(s) | 31 |
| BtsCI | GGATG | 4 cut(s) | 250, 297, 618, 631 |
| BtsIMutI | CAGTG | 2 cut(s) | 709, 849 |
| BveI | ACCTGC | 2 cut(s) | 377, 1421 |
| Cac8I | GCNNGC | 8 cut(s) | 178, 222, 277, 407, 409, 1202, 1224, 1494 |
| CciI | TCATGA | 1 cut(s) | 1041 |
| CfoI | GCGC | 7 cut(s) | 109, 281, 407, 409, 411, 502, 649 |
| Cfr13I | GGNCC | 1 cut(s) | 637 |
| CseI | GACGC | 2 cut(s) | 1054, 1178 |
| CsiI | ACCWGGT | 1 cut(s) | 639 |
| Csp6I | GTAC | 5 cut(s) | 68, 141, 715, 766, 787 |
| CviAII | CATG | 9 cut(s) | 32, 317, 1001, 1042, 1090, 1133, 1201, 1418, 1451 |
| CviQI | GTAC | 5 cut(s) | 68, 141, 715, 766, 787 |
| DdeI | CTNAG | 6 cut(s) | 63, 110, 570, 744, 932, 1218 |
| DpnI | GATC | 3 cut(s) | 1098, 1463, 1484 |
| DpnII | GATC | 3 cut(s) | 1096, 1461, 1482 |
| DraI | TTTAAA | 1 cut(s) | 1122 |
| Eam1104I | CTCTTC | 3 cut(s) | 125, 717, 915 |
| EarI | CTCTTC | 3 cut(s) | 125, 717, 915 |
| EciI | GGCGGA | 2 cut(s) | 625, 638 |
| Ecl136II | GAGCTC | 1 cut(s) | 936 |
| Eco105I | TACGTA | 1 cut(s) | 255 |
| Eco130I | CCWWGG | 3 cut(s) | 31, 976, 1067 |
| Eco24I | GRGCYC | 1 cut(s) | 938 |
| Eco47I | GGWCC | 1 cut(s) | 637 |
| Eco53kI | GAGCTC | 1 cut(s) | 936 |
| Eco72I | CACGTG | 1 cut(s) | 1363 |
| EcoICRI | GAGCTC | 1 cut(s) | 936 |
| EcoRI | GAATTC | 1 cut(s) | 1213 |
| EcoRII | CCWGG | 2 cut(s) | 639, 1381 |
| EcoT14I | CCWWGG | 3 cut(s) | 31, 976, 1067 |
| EcoT38I | GRGCYC | 1 cut(s) | 938 |
| ErhI | CCWWGG | 3 cut(s) | 31, 976, 1067 |
| FaeI | CATG | 9 cut(s) | 35, 320, 1004, 1045, 1093, 1136, 1204, 1421, 1454 |
| FaqI | GGGAC | 2 cut(s) | 698, 1071 |
| FatI | CATG | 9 cut(s) | 31, 316, 1000, 1041, 1089, 1132, 1200, 1417, 1450 |
| FauI | CCCGC | 2 cut(s) | 553, 890 |
| FauNDI | CATATG | 1 cut(s) | 783 |
| FblI | GTMKAC | 1 cut(s) | 251 |
| Fnu4HI | GCNGC | 7 cut(s) | 181, 461, 503, 1087, 1236, 1275, 1510 |
| FokI | GGATG | 4 cut(s) | 257, 304, 625, 638 |
| FriOI | GRGCYC | 1 cut(s) | 938 |
| Fsp4HI | GCNGC | 7 cut(s) | 181, 461, 503, 1087, 1236, 1275, 1510 |
| FspBI | CTAG | 6 cut(s) | 71, 282, 650, 840, 1328, 1549 |
| GlaI | GCGC | 7 cut(s) | 108, 280, 406, 408, 410, 501, 648 |
| GluI | GCNGC | 7 cut(s) | 181, 461, 503, 1087, 1236, 1275, 1510 |
| GsaI | CCCAGC | 1 cut(s) | 1501 |
| GsuI | CTGGAG | 1 cut(s) | 1365 |
| HaeIII | GGCC | 2 cut(s) | 668, 1509 |
| HapII | CCGG | 5 cut(s) | 191, 242, 484, 524, 635 |
| HgaI | GACGC | 2 cut(s) | 1054, 1178 |
| HhaI | GCGC | 7 cut(s) | 109, 281, 407, 409, 411, 502, 649 |
| Hin1II | CATG | 9 cut(s) | 35, 320, 1004, 1045, 1093, 1136, 1204, 1421, 1454 |
| Hin6I | GCGC | 7 cut(s) | 107, 279, 405, 407, 409, 500, 647 |
| HinP1I | GCGC | 7 cut(s) | 107, 279, 405, 407, 409, 500, 647 |
| HindIII | AAGCTT | 1 cut(s) | 591 |
| HinfI | GANTC | 4 cut(s) | 36, 133, 1059, 1454 |
| HpaII | CCGG | 5 cut(s) | 191, 242, 484, 524, 635 |
| HphI | GGTGA | 4 cut(s) | 31, 238, 769, 1445 |
| Hpy166II | GTNNAC | 5 cut(s) | 252, 546, 709, 861, 1360 |
| Hpy188I | TCNGA | 6 cut(s) | 138, 167, 363, 573, 940, 1219 |
| Hpy188III | TCNNGA | 3 cut(s) | 98, 121, 1042 |
| Hpy8I | GTNNAC | 5 cut(s) | 252, 546, 709, 861, 1360 |
| HpyAV | CCTTC | 6 cut(s) | 190, 613, 693, 837, 1020, 1499 |
| HpyCH4III | ACNGT | 3 cut(s) | 148, 853, 1252 |
| HpyCH4IV | ACGT | 3 cut(s) | 254, 717, 1362 |
| HpyCH4V | TGCA | 8 cut(s) | 316, 386, 773, 1089, 1200, 1226, 1235, 1256 |
| HpyF10VI | GCNNNNNNNGC | 5 cut(s) | 566, 653, 1159, 1232, 1498 |
| HpyF3I | CTNAG | 6 cut(s) | 63, 110, 570, 744, 932, 1218 |
| HpySE526I | ACGT | 3 cut(s) | 254, 717, 1362 |
| Hsp92II | CATG | 9 cut(s) | 35, 320, 1004, 1045, 1093, 1136, 1204, 1421, 1454 |
| HspAI | GCGC | 7 cut(s) | 107, 279, 405, 407, 409, 500, 647 |
| Kzo9I | GATC | 3 cut(s) | 1096, 1461, 1482 |
| LguI | GCTCTTC | 1 cut(s) | 915 |
| LmnI | GCTCC | 5 cut(s) | 307, 480, 846, 1159, 1409 |
| Lsp1109I | GCAGC | 4 cut(s) | 192, 447, 1073, 1247 |
| LweI | GCATC | 5 cut(s) | 510, 825, 876, 918, 1235 |
| MabI | ACCWGGT | 1 cut(s) | 639 |
| MaeI | CTAG | 6 cut(s) | 71, 282, 650, 840, 1328, 1549 |
| MaeII | ACGT | 3 cut(s) | 254, 717, 1362 |
| MaeIII | GTNAC | 2 cut(s) | 226, 757 |
| MalI | GATC | 3 cut(s) | 1098, 1463, 1484 |
| MboI | GATC | 3 cut(s) | 1096, 1461, 1482 |
| MboII | GAAGA | 4 cut(s) | 142, 734, 902, 1384 |
| MfeI | CAATTG | 1 cut(s) | 923 |
| MhlI | GDGCHC | 6 cut(s) | 571, 851, 938, 1080, 1186, 1293 |
| MluCI | AATT | 6 cut(s) | 9, 678, 923, 966, 1213, 1243 |
| MlyI | GAGTC | 2 cut(s) | 142, 1053 |
| MmeI | TCCRAC | 1 cut(s) | 431 |
| MroXI | GAANNNNTTC | 1 cut(s) | 909 |
| MseI | TTAA | 4 cut(s) | 1103, 1121, 1247, 1526 |
| MslI | CAYNNNNRTG | 2 cut(s) | 782, 1449 |
| MspI | CCGG | 5 cut(s) | 191, 242, 484, 524, 635 |
| MspR9I | CCNGG | 4 cut(s) | 192, 485, 641, 1383 |
| MunI | CAATTG | 1 cut(s) | 923 |
| MvaI | CCWGG | 2 cut(s) | 641, 1383 |
| MvnI | CGCG | 5 cut(s) | 407, 409, 502, 751, 1512 |
| MwoI | GCNNNNNNNGC | 5 cut(s) | 566, 653, 1159, 1232, 1498 |
| NciI | CCSGG | 2 cut(s) | 192, 485 |
| NcoI | CCATGG | 1 cut(s) | 31 |
| NdeI | CATATG | 1 cut(s) | 783 |
| NdeII | GATC | 3 cut(s) | 1096, 1461, 1482 |
| NlaIII | CATG | 9 cut(s) | 35, 320, 1004, 1045, 1093, 1136, 1204, 1421, 1454 |
| NlaIV | GGNNCC | 4 cut(s) | 155, 482, 633, 1161 |
| NmeAIII | GCCGAG | 2 cut(s) | 262, 1170 |
| NmuCI | GTSAC | 2 cut(s) | 226, 757 |
| NspI | RCATGY | 1 cut(s) | 1204 |
| NspV | TTCGAA | 1 cut(s) | 913 |
| PaeI | GCATGC | 1 cut(s) | 1204 |
| PagI | TCATGA | 1 cut(s) | 1041 |
| PaqCI | CACCTGC | 2 cut(s) | 377, 1421 |
| PauI | GCGCGC | 2 cut(s) | 405, 407 |
| PciSI | GCTCTTC | 1 cut(s) | 915 |
| PdmI | GAANNNNTTC | 1 cut(s) | 909 |
| PfeI | GAWTC | 2 cut(s) | 36, 1454 |
| PkrI | GCNGC | 7 cut(s) | 182, 462, 504, 1088, 1237, 1276, 1511 |
| PleI | GAGTC | 2 cut(s) | 141, 1053 |
| PmaCI | CACGTG | 1 cut(s) | 1363 |
| PmlI | CACGTG | 1 cut(s) | 1363 |
| PpsI | GAGTC | 2 cut(s) | 141, 1053 |
| Ppu21I | YACGTR | 2 cut(s) | 255, 1363 |
| Psp124BI | GAGCTC | 1 cut(s) | 938 |
| Psp6I | CCWGG | 2 cut(s) | 639, 1381 |
| PspCI | CACGTG | 1 cut(s) | 1363 |
| PspFI | CCCAGC | 1 cut(s) | 1497 |
| PspGI | CCWGG | 2 cut(s) | 639, 1381 |
| PspN4I | GGNNCC | 4 cut(s) | 155, 482, 633, 1161 |
| PspPI | GGNCC | 1 cut(s) | 637 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 809, 841 |
| PteI | GCGCGC | 2 cut(s) | 405, 407 |
| RsaI | GTAC | 5 cut(s) | 69, 142, 716, 767, 788 |
| RsaNI | GTAC | 5 cut(s) | 68, 141, 715, 766, 787 |
| RseI | CAYNNNNRTG | 2 cut(s) | 782, 1449 |
| SacI | GAGCTC | 1 cut(s) | 938 |
| SapI | GCTCTTC | 1 cut(s) | 915 |
| SaqAI | TTAA | 4 cut(s) | 1103, 1121, 1247, 1526 |
| SatI | GCNGC | 7 cut(s) | 181, 461, 503, 1087, 1236, 1275, 1510 |
| Sau3AI | GATC | 3 cut(s) | 1096, 1461, 1482 |
| Sau96I | GGNCC | 1 cut(s) | 637 |
| ScaI | AGTACT | 1 cut(s) | 142 |
| SchI | GAGTC | 2 cut(s) | 142, 1053 |
| ScrFI | CCNGG | 4 cut(s) | 192, 485, 641, 1383 |
| SduI | GDGCHC | 6 cut(s) | 571, 851, 938, 1080, 1186, 1293 |
| SexAI | ACCWGGT | 1 cut(s) | 639 |
| SfaNI | GCATC | 5 cut(s) | 510, 825, 876, 918, 1235 |
| SfcI | CTRYAG | 1 cut(s) | 994 |
| SfuI | TTCGAA | 1 cut(s) | 913 |
| SinI | GGWCC | 1 cut(s) | 637 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 782, 1449 |
| SmlI | CTYRAG | 1 cut(s) | 688 |
| SmoI | CTYRAG | 1 cut(s) | 688 |
| SnaBI | TACGTA | 1 cut(s) | 255 |
| SphI | GCATGC | 1 cut(s) | 1204 |
| Sse9I | AATT | 6 cut(s) | 9, 678, 923, 966, 1213, 1243 |
| SspI | AATATT | 1 cut(s) | 918 |
| SspMI | CTAG | 6 cut(s) | 71, 282, 650, 840, 1328, 1549 |
| SstI | GAGCTC | 1 cut(s) | 938 |
| StyD4I | CCNGG | 4 cut(s) | 190, 483, 639, 1381 |
| StyI | CCWWGG | 3 cut(s) | 31, 976, 1067 |
| TaaI | ACNGT | 3 cut(s) | 148, 853, 1252 |
| TaiI | ACGT | 3 cut(s) | 257, 720, 1365 |
| TaqI | TCGA | 5 cut(s) | 913, 1062, 1095, 1298, 1387 |
| TasI | AATT | 6 cut(s) | 9, 678, 923, 966, 1213, 1243 |
| TatI | WGTACW | 2 cut(s) | 140, 765 |
| TauI | GCSGC | 3 cut(s) | 505, 1277, 1512 |
| TfiI | GAWTC | 2 cut(s) | 36, 1454 |
| Tru1I | TTAA | 4 cut(s) | 1103, 1121, 1247, 1526 |
| Tru9I | TTAA | 4 cut(s) | 1103, 1121, 1247, 1526 |
| TscAI | CASTG | 2 cut(s) | 716, 856 |
| TseFI | GTSAC | 2 cut(s) | 226, 757 |
| TseI | GCWGC | 4 cut(s) | 180, 460, 1086, 1235 |
| Tsp45I | GTSAC | 2 cut(s) | 226, 757 |
| TspDTI | ATGAA | 8 cut(s) | 438, 825, 978, 1030, 1140, 1406, 1467, 1482 |
| TspGWI | ACGGA | 1 cut(s) | 245 |
| TspRI | CASTG | 2 cut(s) | 716, 856 |
| VpaK11BI | GGWCC | 1 cut(s) | 637 |
| XapI | RAATTY | 3 cut(s) | 9, 1213, 1243 |
| XceI | RCATGY | 1 cut(s) | 1204 |
| XcmI | CCANNNNNNNNNTGG | 2 cut(s) | 799, 1389 |
| XmiI | GTMKAC | 1 cut(s) | 251 |
| XmnI | GAANNNNTTC | 1 cut(s) | 909 |
| XspI | CTAG | 6 cut(s) | 71, 282, 650, 840, 1328, 1549 |
| ZrmI | AGTACT | 1 cut(s) | 142 |