Rroxscaffold_3G00271660

Pentatricopeptide repeat-containing protein

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
OG0016849
Physical Location & Seq
Reverse (-)
64000305 .. 64001999
1695 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00271660.1

Sequence Viewer

Length: 1695 bp
ATGGATTTGAAAAGTATAGTTTGCGATTTAAAGGACTACCTTAAGCCCACAACCTCCTCCTCCTCCTCCTCTAGAGCTTTAGAGCAGCGCCTCTTCCATCTATTACAGAGCTGCAACACACTCCAAAATCTGACCCAAATTCACACACAGATAGTAGTCCATGGATTCACCCAAAAAAGCTATATTCTTTCTAAGCTACTAGCGTTGTATGTACGTTGTGGGTGTCTTGATAATGCGCTGAGAGTTTTCGGGAATGTAAAGAGTCCGAGTACTACTGTGTGGAACCAGATAATCAGAGGGTATGCTGGTAGCGAAGCTCCGGGGAAGGCGGTTGAGTTGTATAACAGGCTGGCGGCGACGGAAGCCGAGCCGGATGGGTATACGTATTCGTATGTTGTTAGTGCTTGTGCTAGGTCAGGGATGGTTAGAGAGGGGGAGCAGTTGCATGGGAGAGTTTTGGGTGGTGGGTTTGGTTCTAATGTGTTTGTTCAGACCAGTTTGGTTAGTTTGTATGCAGGTGGTGGAGGGTTGAGTGGTGGGCTTGAGAGTGCGCGCAAGGTGTTTGATGAAATGCGTGAGAGGAGCGTTGTCAGCTGGAATACCCTGCTTTCGGGGTATGTGAGGAGCCGGGATTTTGATGGGGCGCGGCGAGTTTTTGATGAGATGCCGGAGAGGAATGTGGTGTCGTGGACGACAATGATTGCGGGGTGTGCTCAGAATGGGAGGTGTAAGGAAGCTTTGAGTTTGTTTGGGCGGATGAGGAAGGCGGATGTCGAACCGGACCAGGTTGCGCTAGTGGCGGTGTTATCGGCCTGTGCTGAGATTGGGGACTTGAGATTGGGAAGGTGGGTTCACTGCTACGTTGAAGAGAGATTGTGTGTTAGAGCTAAGTCGCGGTTGGTGACTTTGTACAATGCACTCATACATATGTACGCCAGTTGTGGTTTGGTTGATGAAGCGTATAAGGTGTTCAAGCAGATGCCTAGAAGGAGCACTGTCTCGTGGACCAGCATCATAGTTGGGTTCGCAGAGCAGGGTCGCGGGGAGGAAGCTCTTGGAATATTTCAATTGATGCTGAGCTCGGAACTTGATGATGTAAGACCCGATGAAATTACTTTCCTTGGGGTGTTGTGTGCTTGTAGCCATGCTGGATTAGTTGATGAGGGCCGAAGACTTTTCAAGTTCATGGCACAGACTTGGGGACTCGAACCAGGGATTGAGCACTATGGCTGCATGGTCGATCTATTAAGCCGTGCTGGTTTTCTCAACGAAGCTCATGTACTTGTGGACACTATGCCGATGGAGCCAAACGACGCTGTGTGGGGTGCTCTCCTTGGCGGTTGCATGCTTCACAAGAATTCTGAGCTTGCATCACTTGCAGCTCAAAAGTTAACAGTTGCACTTGACCCTGACCAAGCTGCAGGGTATCTTGTGCTCTTATCGAATGTGTATGCTTCTGCTAAAAGATGGCTAGATGTTGCTTGTGTGAGACAGAAAATGGTTCACATGGGCGTGAAGAAGCCTCCAGGTCGAAGTTGGGTTCAAATCAATGGAGCTGTTCATGGTTTTGTGGCAGGTGATAGAACCCATAAACATGAATCTTTGATATATGAAATGCTTGGCGAGATCGCAAGGCAAGCCCAGCAAGAAGGCCGCGAACCAGACACGTTAAACATGCTTTCCCTTGAAGTCTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
PPR PPR_2

Protein Analysis

564

Amino Acids

62.16

Weight (kDa)

6.91

Isoelectric Point (pI)

41.51

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PPR_2 PF13041 89 - 138 4.8e-07 PPR repeat family
PPR_2 PF13041 195 - 227 6.5e-08 PPR repeat family
PPR PF01535 197 - 227 6.6e-08 PPR repeat
PPR_2 PF13041 225 - 273 2.4e-10 PPR repeat family
PPR PF01535 228 - 257 4.4e-09 PPR repeat
PPR PF01535 303 - 330 6.4e-07 PPR repeat
PPR_1 PF12854 304 - 327 2.9e-06 PPR repeat
E_motif PF20431 451 - 515 2.5e-16 E motif
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0016849)

Species Orthologous Gene IDs
fragaria_vesca FvH4_5g14600
malus_domestica MD06G1197100.v1.1
prunus_persica Prupe.5G197400_v2.0.a1
pyrus_communis pycom06g17390
rosa_chinensis RchiOBHm_Chr7g0181891
rosa_laevigata RLG00000005165
rosa_multiflora Rmu_co8431917.1_g000001 Rmu_sc0021327.1_g000007
rosa_roxburghii Rroxscaffold_3G00271660
rosa_rugosa Rorug06G0444800
rosa_samantha Rh7AG047100 Rh7BG046700 Rh7CG047200
rosa_wichuraiana Rw7G003900

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 2 cut(s) 506, 1565
Acc36I ACCTGC 2 cut(s) 506, 1565
AccI GTMKAC 1 cut(s) 380
AccII CGCG 5 cut(s) 553, 646, 895, 1041, 1656
AcsI RAATTY 2 cut(s) 138, 1357
AfaI GTAC 5 cut(s) 213, 271, 911, 932, 1281
AfiI CCNNNNNNNGG 1 cut(s) 610
AflII CTTAAG 1 cut(s) 41
AflIII ACRYGT 1 cut(s) 1665
AgsI TTSAA 7 cut(s) 10, 866, 973, 1067, 1180, 1544, 1688
AjnI CCWGG 3 cut(s) 783, 1210, 1525
AloI GAACNNNNNNTCC 2 cut(s) 834, 866
Alw21I GWGCWC 6 cut(s) 715, 995, 1082, 1224, 1330, 1437
Alw26I GTCTC 2 cut(s) 1003, 1483
AoxI GGCC 3 cut(s) 810, 1165, 1651
ApeKI GCWGC 5 cut(s) 85, 111, 1230, 1379, 1418
ApoI RAATTY 2 cut(s) 138, 1357
AspLEI GCGC 6 cut(s) 90, 238, 553, 555, 646, 793
AspS9I GGNCC 3 cut(s) 781, 1005, 1165
AsuC2I CCSGG 2 cut(s) 321, 629
AsuHPI GGTGA 3 cut(s) 160, 913, 1589
AvaII GGWCC 2 cut(s) 781, 1005
BanII GRGCYC 1 cut(s) 1082
BarI GAAGNNNNNNTAC 2 cut(s) 1263, 1295
BauI CACGAG 1 cut(s) 1000
BbsI GAAGAC 1 cut(s) 1177
Bbv12I GWGCWC 6 cut(s) 715, 995, 1082, 1224, 1330, 1437
BbvI GCAGC 5 cut(s) 97, 98, 1217, 1391, 1405
BccI CCATC 6 cut(s) 105, 368, 415, 632, 1294, 1461
BceAI ACGGC 1 cut(s) 1236
BciT130I CCWGG 3 cut(s) 785, 1212, 1527
BcnI CCSGG 2 cut(s) 321, 629
BcoDI GTCTC 2 cut(s) 1003, 1483
BfaI CTAG 7 cut(s) 72, 200, 411, 794, 984, 1472, 1693
BfmI CTRYAG 1 cut(s) 1419
BfoI RGCGCY 1 cut(s) 91
BfrI CTTAAG 1 cut(s) 41
BfuAI ACCTGC 2 cut(s) 506, 1565
BisI GCNGC 8 cut(s) 86, 112, 354, 647, 1231, 1380, 1419, 1654
BlpI GCTNAGC 1 cut(s) 1076
BlsI GCNGC 8 cut(s) 87, 113, 355, 648, 1232, 1381, 1420, 1655
BmcAI AGTACT 1 cut(s) 271
Bme1390I CCNGG 5 cut(s) 321, 629, 785, 1212, 1527
Bme18I GGWCC 2 cut(s) 781, 1005
BmgT120I GGNCC 3 cut(s) 781, 1005, 1165
BmiI GGNNCC 3 cut(s) 284, 626, 1305
BmrFI CCNGG 5 cut(s) 321, 629, 785, 1212, 1527
BmsI GCATC 5 cut(s) 654, 969, 1020, 1062, 1379
BpiI GAAGAC 1 cut(s) 1177
BpmI CTGGAG 1 cut(s) 1509
Bpu1102I GCTNAGC 1 cut(s) 1076
BpuEI CTTGAG 2 cut(s) 563, 853
BpuMI CCSGG 2 cut(s) 321, 629
BsaAI YACGTR 1 cut(s) 384
BsaJI CCNNGG 5 cut(s) 160, 320, 1120, 1211, 1333
BsaWI WCCGGW 1 cut(s) 778
Bsc4I CCNNNNNNNGG 1 cut(s) 610
Bse1I ACTGG 2 cut(s) 495, 936
BseBI CCWGG 3 cut(s) 785, 1212, 1527
BseDI CCNNGG 5 cut(s) 160, 320, 1120, 1211, 1333
BseGI GGATG 4 cut(s) 379, 426, 762, 775
BseLI CCNNNNNNNGG 1 cut(s) 610
BseMII CTCAG 5 cut(s) 230, 728, 810, 1067, 1353
BseNI ACTGG 2 cut(s) 495, 936
BsePI GCGCGC 1 cut(s) 551
BseRI GAGGAG 7 cut(s) 46, 49, 52, 55, 58, 595, 637
BseXI GCAGC 5 cut(s) 97, 98, 1217, 1391, 1405
BseYI CCCAGC 1 cut(s) 1641
Bsh1236I CGCG 5 cut(s) 553, 646, 895, 1041, 1656
BshFI GGCC 3 cut(s) 812, 1167, 1653
BsiHKAI GWGCWC 6 cut(s) 715, 995, 1082, 1224, 1330, 1437
BsiSI CCGG 5 cut(s) 320, 371, 628, 668, 779
BslFI GGGAC 2 cut(s) 842, 1215
BslI CCNNNNNNNGG 1 cut(s) 610
BsmAI GTCTC 2 cut(s) 1003, 1483
BsmFI GGGAC 2 cut(s) 842, 1215
BsnI GGCC 3 cut(s) 812, 1167, 1653
Bsp1286I GDGCHC 6 cut(s) 715, 995, 1082, 1224, 1330, 1437
Bsp1407I TGTACA 1 cut(s) 909
Bsp143I GATC 2 cut(s) 1240, 1626
Bsp1720I GCTNAGC 1 cut(s) 1076
Bsp19I CCATGG 1 cut(s) 160
BspANI GGCC 3 cut(s) 812, 1167, 1653
BspCNI CTCAG 5 cut(s) 231, 727, 811, 1068, 1354
BspFNI CGCG 5 cut(s) 553, 646, 895, 1041, 1656
BspLI GGNNCC 3 cut(s) 284, 626, 1305
BspMAI CTGCAG 1 cut(s) 1423
BspMI ACCTGC 2 cut(s) 506, 1565
BspTI CTTAAG 1 cut(s) 41
BsrGI TGTACA 1 cut(s) 909
BsrI ACTGG 2 cut(s) 495, 936
BssECI CCNNGG 5 cut(s) 160, 320, 1120, 1211, 1333
BssHII GCGCGC 1 cut(s) 551
BssMI GATC 2 cut(s) 1240, 1626
BssNAI GTATAC 1 cut(s) 381
BssSI CACGAG 1 cut(s) 1000
BssT1I CCWWGG 3 cut(s) 160, 1120, 1333
Bst1107I GTATAC 1 cut(s) 381
Bst2BI CACGAG 1 cut(s) 1000
Bst2UI CCWGG 3 cut(s) 785, 1212, 1527
Bst4CI ACNGT 3 cut(s) 277, 997, 1396
Bst6I CTCTTC 2 cut(s) 98, 861
BstAFI CTTAAG 1 cut(s) 41
BstAPI GCANNNNNTGC 1 cut(s) 1376
BstAUI TGTACA 1 cut(s) 909
BstBAI YACGTR 1 cut(s) 384
BstC8I GCNNGC 5 cut(s) 351, 553, 1346, 1368, 1638
BstDEI CTNAG 7 cut(s) 192, 239, 714, 819, 888, 1076, 1362
BstDSI CCRYGG 1 cut(s) 160
BstF5I GGATG 4 cut(s) 379, 426, 762, 775
BstFNI CGCG 5 cut(s) 553, 646, 895, 1041, 1656
BstH2I RGCGCY 1 cut(s) 91
BstHHI GCGC 6 cut(s) 90, 238, 553, 555, 646, 793
BstKTI GATC 2 cut(s) 1243, 1629
BstMAI GTCTC 2 cut(s) 1003, 1483
BstMBI GATC 2 cut(s) 1240, 1626
BstMWI GCNNNNNNNGC 8 cut(s) 362, 591, 710, 797, 1303, 1376, 1637, 1642
BstNI CCWGG 3 cut(s) 785, 1212, 1527
BstNSI RCATGY 2 cut(s) 1348, 1678
BstSCI CCNGG 5 cut(s) 319, 627, 783, 1210, 1525
BstSFI CTRYAG 1 cut(s) 1419
BstSNI TACGTA 1 cut(s) 384
BstUI CGCG 5 cut(s) 553, 646, 895, 1041, 1656
BstV1I GCAGC 5 cut(s) 97, 98, 1217, 1391, 1405
BstV2I GAAGAC 1 cut(s) 1177
BstZ17I GTATAC 1 cut(s) 381
BsuRI GGCC 3 cut(s) 812, 1167, 1653
BtgI CCRYGG 1 cut(s) 160
BtsCI GGATG 4 cut(s) 379, 426, 762, 775
BtsI GCAGTG 1 cut(s) 853
BtsIMutI CAGTG 2 cut(s) 853, 993
BveI ACCTGC 2 cut(s) 506, 1565
Cac8I GCNNGC 5 cut(s) 351, 553, 1346, 1368, 1638
CfoI GCGC 6 cut(s) 90, 238, 553, 555, 646, 793
Cfr13I GGNCC 3 cut(s) 781, 1005, 1165
CseI GACGC 1 cut(s) 1322
CsiI ACCWGGT 1 cut(s) 783
Csp6I GTAC 5 cut(s) 212, 270, 910, 931, 1280
CviQI GTAC 5 cut(s) 212, 270, 910, 931, 1280
DdeI CTNAG 7 cut(s) 192, 239, 714, 819, 888, 1076, 1362
DpnI GATC 2 cut(s) 1242, 1628
DpnII GATC 2 cut(s) 1240, 1626
DraI TTTAAA 1 cut(s) 30
Eam1104I CTCTTC 2 cut(s) 98, 861
EarI CTCTTC 2 cut(s) 98, 861
EciI GGCGGA 2 cut(s) 769, 782
Ecl136II GAGCTC 1 cut(s) 1080
Eco105I TACGTA 1 cut(s) 384
Eco130I CCWWGG 3 cut(s) 160, 1120, 1333
Eco24I GRGCYC 1 cut(s) 1082
Eco47I GGWCC 2 cut(s) 781, 1005
Eco53kI GAGCTC 1 cut(s) 1080
EcoICRI GAGCTC 1 cut(s) 1080
EcoRI GAATTC 1 cut(s) 1357
EcoRII CCWGG 3 cut(s) 783, 1210, 1525
EcoT14I CCWWGG 3 cut(s) 160, 1120, 1333
EcoT38I GRGCYC 1 cut(s) 1082
ErhI CCWWGG 3 cut(s) 160, 1120, 1333
FaqI GGGAC 2 cut(s) 842, 1215
FauI CCCGC 2 cut(s) 697, 1034
FauNDI CATATG 1 cut(s) 927
FblI GTMKAC 1 cut(s) 380
Fnu4HI GCNGC 8 cut(s) 86, 112, 354, 647, 1231, 1380, 1419, 1654
FokI GGATG 4 cut(s) 386, 433, 769, 782
FriOI GRGCYC 1 cut(s) 1082
Fsp4HI GCNGC 8 cut(s) 86, 112, 354, 647, 1231, 1380, 1419, 1654
FspBI CTAG 7 cut(s) 72, 200, 411, 794, 984, 1472, 1693
GlaI GCGC 6 cut(s) 89, 237, 552, 554, 645, 792
GluI GCNGC 8 cut(s) 86, 112, 354, 647, 1231, 1380, 1419, 1654
GsaI CCCAGC 1 cut(s) 1645
GsuI CTGGAG 1 cut(s) 1509
HaeII RGCGCY 1 cut(s) 91
HaeIII GGCC 3 cut(s) 812, 1167, 1653
HapII CCGG 5 cut(s) 320, 371, 628, 668, 779
HgaI GACGC 1 cut(s) 1322
HhaI GCGC 6 cut(s) 90, 238, 553, 555, 646, 793
Hin6I GCGC 6 cut(s) 88, 236, 551, 553, 644, 791
HinP1I GCGC 6 cut(s) 88, 236, 551, 553, 644, 791
HincII GTYRAC 1 cut(s) 1392
HindII GTYRAC 1 cut(s) 1392
HindIII AAGCTT 1 cut(s) 735
HinfI GANTC 4 cut(s) 165, 262, 1203, 1598
HpaI GTTAAC 1 cut(s) 1392
HpaII CCGG 5 cut(s) 320, 371, 628, 668, 779
HphI GGTGA 3 cut(s) 160, 913, 1589
Hpy166II GTNNAC 7 cut(s) 381, 690, 853, 1005, 1288, 1392, 1504
Hpy188I TCNGA 7 cut(s) 132, 267, 296, 492, 717, 1084, 1363
Hpy188III TCNNGA 3 cut(s) 72, 227, 250
Hpy8I GTNNAC 7 cut(s) 381, 690, 853, 1005, 1288, 1392, 1504
Hpy99I CGWCG 2 cut(s) 361, 1316
HpyAV CCTTC 5 cut(s) 319, 757, 837, 981, 1643
HpyCH4III ACNGT 3 cut(s) 277, 997, 1396
HpyCH4IV ACGT 4 cut(s) 214, 383, 861, 1667
HpyF10VI GCNNNNNNNGC 8 cut(s) 362, 591, 710, 797, 1303, 1376, 1637, 1642
HpyF3I CTNAG 7 cut(s) 192, 239, 714, 819, 888, 1076, 1362
HpySE526I ACGT 4 cut(s) 214, 383, 861, 1667
HspAI GCGC 6 cut(s) 88, 236, 551, 553, 644, 791
KspAI GTTAAC 1 cut(s) 1392
Kzo9I GATC 2 cut(s) 1240, 1626
LmnI GCTCC 7 cut(s) 322, 436, 582, 624, 990, 1303, 1553
Lsp1109I GCAGC 5 cut(s) 97, 98, 1217, 1391, 1405
LweI GCATC 5 cut(s) 654, 969, 1020, 1062, 1379
MabI ACCWGGT 1 cut(s) 783
MaeI CTAG 7 cut(s) 72, 200, 411, 794, 984, 1472, 1693
MaeII ACGT 4 cut(s) 214, 383, 861, 1667
MaeIII GTNAC 1 cut(s) 901
MalI GATC 2 cut(s) 1242, 1628
MboI GATC 2 cut(s) 1240, 1626
MboII GAAGA 4 cut(s) 85, 878, 1182, 1528
MfeI CAATTG 1 cut(s) 1067
MhlI GDGCHC 6 cut(s) 715, 995, 1082, 1224, 1330, 1437
MluCI AATT 4 cut(s) 138, 1067, 1110, 1357
MlyI GAGTC 2 cut(s) 271, 1197
MseI TTAA 5 cut(s) 29, 42, 1247, 1391, 1670
MslI CAYNNNNRTG 3 cut(s) 926, 1511, 1593
MspA1I CMGCKG 1 cut(s) 594
MspCI CTTAAG 1 cut(s) 41
MspI CCGG 5 cut(s) 320, 371, 628, 668, 779
MspR9I CCNGG 5 cut(s) 321, 629, 785, 1212, 1527
MunI CAATTG 1 cut(s) 1067
MvaI CCWGG 3 cut(s) 785, 1212, 1527
MvnI CGCG 5 cut(s) 553, 646, 895, 1041, 1656
MwoI GCNNNNNNNGC 8 cut(s) 362, 591, 710, 797, 1303, 1376, 1637, 1642
NciI CCSGG 2 cut(s) 321, 629
NcoI CCATGG 1 cut(s) 160
NdeI CATATG 1 cut(s) 927
NdeII GATC 2 cut(s) 1240, 1626
NlaIV GGNNCC 3 cut(s) 284, 626, 1305
NmeAIII GCCGAG 1 cut(s) 391
NmuCI GTSAC 1 cut(s) 901
NspI RCATGY 2 cut(s) 1348, 1678
PaeI GCATGC 1 cut(s) 1348
PaqCI CACCTGC 2 cut(s) 506, 1565
PauI GCGCGC 1 cut(s) 551
PfeI GAWTC 2 cut(s) 165, 1598
PkrI GCNGC 8 cut(s) 87, 113, 355, 648, 1232, 1381, 1420, 1655
PleI GAGTC 2 cut(s) 270, 1197
PpsI GAGTC 2 cut(s) 270, 1197
Ppu21I YACGTR 1 cut(s) 384
Psp124BI GAGCTC 1 cut(s) 1082
Psp6I CCWGG 3 cut(s) 783, 1210, 1525
PspFI CCCAGC 1 cut(s) 1641
PspGI CCWGG 3 cut(s) 783, 1210, 1525
PspN4I GGNNCC 3 cut(s) 284, 626, 1305
PspPI GGNCC 3 cut(s) 781, 1005, 1165
PsrI GAACNNNNNNTAC 2 cut(s) 953, 985
PstI CTGCAG 1 cut(s) 1423
PteI GCGCGC 1 cut(s) 551
PvuII CAGCTG 1 cut(s) 594
RsaI GTAC 5 cut(s) 213, 271, 911, 932, 1281
RsaNI GTAC 5 cut(s) 212, 270, 910, 931, 1280
RseI CAYNNNNRTG 3 cut(s) 926, 1511, 1593
SacI GAGCTC 1 cut(s) 1082
SaqAI TTAA 5 cut(s) 29, 42, 1247, 1391, 1670
SatI GCNGC 8 cut(s) 86, 112, 354, 647, 1231, 1380, 1419, 1654
Sau3AI GATC 2 cut(s) 1240, 1626
Sau96I GGNCC 3 cut(s) 781, 1005, 1165
ScaI AGTACT 1 cut(s) 271
SchI GAGTC 2 cut(s) 271, 1197
ScrFI CCNGG 5 cut(s) 321, 629, 785, 1212, 1527
SduI GDGCHC 6 cut(s) 715, 995, 1082, 1224, 1330, 1437
SexAI ACCWGGT 1 cut(s) 783
SfaNI GCATC 5 cut(s) 654, 969, 1020, 1062, 1379
SfcI CTRYAG 1 cut(s) 1419
SinI GGWCC 2 cut(s) 781, 1005
SmiMI CAYNNNNRTG 3 cut(s) 926, 1511, 1593
SmlI CTYRAG 3 cut(s) 41, 542, 832
SmoI CTYRAG 3 cut(s) 41, 542, 832
SnaBI TACGTA 1 cut(s) 384
SphI GCATGC 1 cut(s) 1348
Sse9I AATT 4 cut(s) 138, 1067, 1110, 1357
SspI AATATT 1 cut(s) 1062
SspMI CTAG 7 cut(s) 72, 200, 411, 794, 984, 1472, 1693
SstI GAGCTC 1 cut(s) 1082
StyD4I CCNGG 5 cut(s) 319, 627, 783, 1210, 1525
StyI CCWWGG 3 cut(s) 160, 1120, 1333
TaaI ACNGT 3 cut(s) 277, 997, 1396
TaiI ACGT 4 cut(s) 217, 386, 864, 1670
TaqI TCGA 5 cut(s) 774, 1206, 1239, 1442, 1531
TasI AATT 4 cut(s) 138, 1067, 1110, 1357
TatI WGTACW 3 cut(s) 269, 909, 1279
TauI GCSGC 3 cut(s) 356, 649, 1656
TfiI GAWTC 2 cut(s) 165, 1598
Tru1I TTAA 5 cut(s) 29, 42, 1247, 1391, 1670
Tru9I TTAA 5 cut(s) 29, 42, 1247, 1391, 1670
TscAI CASTG 2 cut(s) 860, 1000
TseFI GTSAC 1 cut(s) 901
TseI GCWGC 5 cut(s) 85, 111, 1230, 1379, 1418
Tsp45I GTSAC 1 cut(s) 901
TspDTI ATGAA 7 cut(s) 582, 969, 1122, 1174, 1550, 1611, 1626
TspGWI ACGGA 1 cut(s) 374
TspRI CASTG 2 cut(s) 860, 1000
Vha464I CTTAAG 1 cut(s) 41
VpaK11BI GGWCC 2 cut(s) 781, 1005
XapI RAATTY 2 cut(s) 138, 1357
XbaI TCTAGA 1 cut(s) 71
XceI RCATGY 2 cut(s) 1348, 1678
XcmI CCANNNNNNNNNTGG 2 cut(s) 943, 1533
XmiI GTMKAC 1 cut(s) 380
XspI CTAG 7 cut(s) 72, 200, 411, 794, 984, 1472, 1693
ZrmI AGTACT 1 cut(s) 271
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.