FvH4_5g14650

DnaJ molecular chaperone homology domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
OG0005502
Physical Location & Seq
Reverse (-)
8298248 .. 8305995
7748 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g14650.t5

Sequence Viewer

Length: 2124 bp
ATGGCAATCCCTGCGGCGGCGAAGGCGAAGGCGAAACCGACGGAGACGGCGACGGCGAATAGCTCGTCAATGACGTCGACGGTCAGAGCCTACTCCATGCCTCTGATTCTCTTCCTCGCCGCCATGTATTTCCAGCTCTCTATTATCCCCAAATCCTTCCCTCCTTCTCACTACGACGTACTTGGTTTGAGGAGTCAGAGCTCCGTTGAAGAAGTGAAGGAGGCCTACGACAACGTTTCTTCCACCTGGAATTCCGAAGCGCAAGCTCCTGATTCTCTAGTGTTTATAAAGATTCGATATGCCTATGAGTTGCTGACAAATCCATCATGGAAAAGAAACTACGATAATTTTGGCTTTGAGGAGCAAATAGATGTAATTGAGAAACTCAAAAAGCAATATGCTGGTGAAAGCTTTTCACGTATAGACCTTCCTTTACTAGAGTCTGCTGCTTCAGATTCTGAAGATCATAACCTCCCGGTCCTTACCTCTAGGGATTTCCAGACCATGTTTCAGGAAAACAAGCCCTGCCTAATTAAATTGTGCTCATTTGGGAGCAAAAGCTGTGATCAATTTTCTCAGGCCTGGAAAAGAATTGCTGGTTTCTTGGATGGTGTGGCAAATGCTGCTCAGATAGATCTCGAAGAGATTCAGCTAGCAACATATCTTGCTGAGAGAAAACCAACCGGACAACCTTTTTTCAGGAATGGCCTTCCTTCTTTTGTTGCTTTTCCCCAGGGATGTAAAAGTGCCAAGTGCCTTATTAGGTATGAAGGAGGCCCCTCTATTGATTCAATTACAGACTGGTTTGCAACAACCATACTCGGTTTACCTCGTATTCTTTACTACTCAAAGGAGTCACTGGCAGAGAAGTTTCTAGCAAAAGTTAGCCTTCATAAGGTAAAAGTCATTTTCTTCTCAAAAACAGGGGAGCGTGCAGCTCCATTCATACGCCAAGTGGCTAAAAACTATTGGGCTCATGCTTCTTTTGCATTTGTACTGTGGCGAGATGAGGAATCTTCCTTTTGGTTCAATTCGTTTGAAGTTGAATCTGCACCTGCTATAGTGTTTCTGAAAGATCCTGGTGTCAAGCCTGTTGTGTACCATGGGTCTTTCAGCAATTCACGTCTCTTAAATATAATCGAACAGAATAAAGAGCAAGAGCTTCCTCAGTTGAGGAGTACAACGTCTATGCAATTGGGTTGCGATGCCCATGGCTATTCTCGTGCTGGGTATGATACAGTTACTTGGTACTGTGCTGTTATAGCTGGAAGGCATAGCCCACAACTCAGTCAAATGCGCAGAACCATGCGCAGGGTTCAAGAAAATTTATCGAATGAAGTTGAGTCAGTTCCAGCTGATGAAGAACCATATACAGCACCAGCAGCACATGCACTTAAAAGTAAAAGACTGACATTTGCTTGGCTTGATGGGGAAGCACAAAAGAAATATTGTCAATTCTTCCTCCATTCTGAAACCAGCTATGAAACTTGTGGATCAAGGACAGATATGACCGATGTGCCCAAGTTGTTTATTATACGTTACAAAAGGAATGTAACAGAAGAGAGTGATAAACCAGAAGGAAGGCCAAAAAGCATATGGGATTCACTTCGAGACCAGGAATTAGATCCTGCAGCACAGCTTGTGGCAAAGTACAATGGTTCAGATGAAATATCAGAGATCACCAAATGGATCTCACAGATAATCAAAGATGGTGATGCCAGAGAACTTCCTCACTATAGAACAAGAACTCCTCAACTGGTTCCTGATGATTCAGAACCAATATGGTCTGGCAGTGTGCAACGTATTCCTTCAACAATCACGATAAAGCAGAGCATCATTGGCATTTTACGTGGAGTATACGATCGTATGGAAGATCCTAGAATTGGTCCCATCTTACTTCTGGCAGCACTAATGTCTTTCGGTACCATCTGGCTTCGAAGAAGTCAAGTAACTCAATTGTCTAATCAATCAAACTCCAAGGTGAACAGTAAGGATAAAAGCAGACGAAGGAGGAGAGACCGCACCGGAGCAGCATCTACTCAAGATCTACCTCCTTCCATTACTGATTTAGAACCCAGAGATTCTTATGAAATGCCACTATCAGGTTCCGACTCCGATCAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001671 GO:0001932 GO:0001933 GO:0003674 GO:0003824 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005788 GO:0006457 GO:0006508 GO:0006511 GO:0006807 GO:0006915 GO:0006950 GO:0007154 GO:0007165 GO:0008047 GO:0008150 GO:0008152 GO:0008219 GO:0009056 GO:0009057 GO:0009892 GO:0009987 GO:0010033 GO:0010243 GO:0010498 GO:0010563 GO:0010605 GO:0012501 GO:0012505 GO:0015035 GO:0015036 GO:0016491 GO:0016667 GO:0016671 GO:0019220 GO:0019222 GO:0019538 GO:0019899 GO:0019941 GO:0023052 GO:0030163 GO:0030234 GO:0030433 GO:0030544 GO:0031072 GO:0031323 GO:0031324 GO:0031399 GO:0031400 GO:0031974 GO:0032268 GO:0032269 GO:0032781 GO:0032991 GO:0033554 GO:0034663 GO:0034975 GO:0034976 GO:0035556 GO:0036503 GO:0042221 GO:0042325 GO:0042326 GO:0043085 GO:0043161 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043462 GO:0043632 GO:0044093 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044422 GO:0044424 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0045936 GO:0048519 GO:0048523 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051087 GO:0051117 GO:0051171 GO:0051172 GO:0051174 GO:0051246 GO:0051248 GO:0051336 GO:0051345 GO:0051603 GO:0051716 GO:0051787 GO:0055114 GO:0060255 GO:0060589 GO:0060590 GO:0065007 GO:0065009 GO:0070013 GO:0070059 GO:0071704 GO:0080090 GO:0097190 GO:0097193 GO:0098772 GO:1901564 GO:1901565 GO:1901575 GO:1901698
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DnaJ

Protein Analysis

708

Amino Acids

79.86

Weight (kDa)

7.13

Isoelectric Point (pI)

55.66

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DnaJ PF00226 57 - 115 2.6e-07 DnaJ domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 287
AarI CACCTGC 1 cut(s) 1063
AatII GACGTC 1 cut(s) 77
Acc16I TGCGCA 2 cut(s) 1298, 1310
Acc36I ACCTGC 1 cut(s) 1063
Acc65I GGTACC 1 cut(s) 1922
AccB1I GGYRCC 1 cut(s) 1922
AccI GTMKAC 2 cut(s) 77, 1857
AciI CCGC 4 cut(s) 14, 17, 120, 2020
AclI AACGTT 1 cut(s) 234
AclWI GGATC 5 cut(s) 1070, 1501, 1619, 1697, 1868
AcsI RAATTY 2 cut(s) 250, 1324
AcuI CTGAAG 2 cut(s) 435, 480
AcyI GRCGYC 1 cut(s) 74
AfaI GTAC 7 cut(s) 180, 996, 1100, 1180, 1250, 1652, 1924
AfiI CCNNNNNNNGG 5 cut(s) 16, 895, 1311, 1883, 2102
AgsI TTSAA 7 cut(s) 209, 792, 1030, 1040, 1046, 1319, 1812
AjiI CACGTC 1 cut(s) 1124
AjnI CCWGG 5 cut(s) 245, 581, 732, 1078, 1614
AloI GAACNNNNNNTCC 2 cut(s) 1732, 1764
Alw21I GWGCWC 2 cut(s) 203, 545
Alw26I GTCTC 4 cut(s) 38, 1130, 1605, 2010
AlwI GGATC 5 cut(s) 1070, 1501, 1619, 1697, 1868
AlwNI CAGNNNCTG 1 cut(s) 458
AoxI GGCC 5 cut(s) 222, 579, 706, 775, 1583
ApeKI GCWGC 7 cut(s) 446, 623, 935, 1382, 1631, 1904, 2030
ApoI RAATTY 2 cut(s) 250, 1324
ArsI GACNNNNNNTTYG 2 cut(s) 50, 82
Asp700I GAANNNNTTC 1 cut(s) 645
Asp718I GGTACC 1 cut(s) 1922
AspLEI GCGC 3 cut(s) 262, 1299, 1311
AspS9I GGNCC 3 cut(s) 478, 776, 1886
AsuC2I CCSGG 1 cut(s) 476
AsuHPI GGTGA 4 cut(s) 416, 1672, 1724, 1993
AsuII TTCGAA 1 cut(s) 1936
AsuNHI GCTAGC 1 cut(s) 652
AvaII GGWCC 2 cut(s) 478, 1886
BaeGI GKGCMC 1 cut(s) 1521
BanI GGYRCC 1 cut(s) 1922
BanII GRGCYC 2 cut(s) 203, 976
BarI GAAGNNNNNNTAC 2 cut(s) 209, 241
BauI CACGAG 1 cut(s) 1221
Bbv12I GWGCWC 2 cut(s) 203, 545
BbvI GCAGC 7 cut(s) 433, 610, 947, 1394, 1643, 1916, 2042
BccI CCATC 6 cut(s) 331, 602, 1421, 1703, 1898, 1934
BceAI ACGGC 2 cut(s) 63, 69
BciT130I CCWGG 5 cut(s) 247, 583, 734, 1080, 1616
BclI TGATCA 1 cut(s) 565
BcnI CCSGG 1 cut(s) 476
BcoDI GTCTC 4 cut(s) 38, 1130, 1605, 2010
BfaI CTAG 6 cut(s) 278, 437, 489, 653, 875, 1878
BfmI CTRYAG 3 cut(s) 1059, 1629, 1735
BfuAI ACCTGC 1 cut(s) 1063
BglII AGATCT 2 cut(s) 634, 2044
Bme1390I CCNGG 6 cut(s) 247, 476, 583, 734, 1080, 1616
Bme18I GGWCC 2 cut(s) 478, 1886
BmgBI CACGTC 1 cut(s) 1124
BmgT120I GGNCC 3 cut(s) 478, 776, 1886
BmiI GGNNCC 5 cut(s) 778, 1761, 1888, 1924, 2107
BmrFI CCNGG 6 cut(s) 247, 476, 583, 734, 1080, 1616
BmsI GCATC 4 cut(s) 1195, 1705, 1842, 2042
BmtI GCTAGC 1 cut(s) 656
Bpu14I TTCGAA 1 cut(s) 1936
BpuEI CTTGAG 1 cut(s) 2025
BpuMI CCSGG 1 cut(s) 476
BsaAI YACGTR 2 cut(s) 419, 1850
BsaHI GRCGYC 1 cut(s) 74
BsaI GGTCTC 2 cut(s) 1605, 2010
BsaJI CCNNGG 5 cut(s) 732, 733, 1102, 1210, 1977
BsaWI WCCGGW 2 cut(s) 683, 2024
BsaXI ACNNNNNCTCC 2 cut(s) 1732, 1762
Bsc4I CCNNNNNNNGG 5 cut(s) 16, 895, 1311, 1883, 2102
Bse1I ACTGG 3 cut(s) 806, 864, 1761
BseBI CCWGG 5 cut(s) 247, 583, 734, 1080, 1616
BseDI CCNNGG 5 cut(s) 732, 733, 1102, 1210, 1977
BseGI GGATG 2 cut(s) 613, 743
BseLI CCNNNNNNNGG 5 cut(s) 16, 895, 1311, 1883, 2102
BseMII CTCAG 5 cut(s) 590, 641, 660, 1181, 1300
BseNI ACTGG 3 cut(s) 806, 864, 1761
BseRI GAGGAG 5 cut(s) 205, 374, 1189, 1740, 2026
BseSI GKGCMC 1 cut(s) 1521
BseXI GCAGC 7 cut(s) 433, 610, 947, 1394, 1643, 1916, 2042
BseYI CCCAGC 1 cut(s) 1226
BsgI GTGCAG 2 cut(s) 954, 1035
Bsh1285I CGRYCG 1 cut(s) 1864
BshFI GGCC 5 cut(s) 224, 581, 708, 777, 1585
BshNI GGYRCC 1 cut(s) 1922
BsiEI CGRYCG 1 cut(s) 1864
BsiHKAI GWGCWC 2 cut(s) 203, 545
BsiSI CCGG 3 cut(s) 476, 684, 2025
BslFI GGGAC 1 cut(s) 1872
BslI CCNNNNNNNGG 5 cut(s) 16, 895, 1311, 1883, 2102
BsmAI GTCTC 4 cut(s) 38, 1130, 1605, 2010
BsmBI CGTCTC 2 cut(s) 38, 1130
BsmFI GGGAC 1 cut(s) 1872
BsnI GGCC 5 cut(s) 224, 581, 708, 777, 1585
Bso31I GGTCTC 2 cut(s) 1605, 2010
Bsp119I TTCGAA 1 cut(s) 1936
Bsp1286I GDGCHC 4 cut(s) 203, 545, 976, 1521
Bsp19I CCATGG 2 cut(s) 1102, 1210
BspACI CCGC 4 cut(s) 14, 17, 120, 2020
BspANI GGCC 5 cut(s) 224, 581, 708, 777, 1585
BspCNI CTCAG 5 cut(s) 589, 640, 661, 1180, 1299
BspLI GGNNCC 5 cut(s) 778, 1761, 1888, 1924, 2107
BspMAI CTGCAG 1 cut(s) 1633
BspMI ACCTGC 1 cut(s) 1063
BspOI GCTAGC 1 cut(s) 656
BspPI GGATC 5 cut(s) 1070, 1501, 1619, 1697, 1868
BspT104I TTCGAA 1 cut(s) 1936
BspT107I GGYRCC 1 cut(s) 1922
BspTNI GGTCTC 2 cut(s) 1605, 2010
BsrI ACTGG 3 cut(s) 806, 864, 1761
BssECI CCNNGG 5 cut(s) 732, 733, 1102, 1210, 1977
BssNAI GTATAC 1 cut(s) 1858
BssNI GRCGYC 1 cut(s) 74
BssSI CACGAG 1 cut(s) 1221
BssT1I CCWWGG 3 cut(s) 1102, 1210, 1977
Bst1107I GTATAC 1 cut(s) 1858
Bst2BI CACGAG 1 cut(s) 1221
Bst2UI CCWGG 5 cut(s) 247, 583, 734, 1080, 1616
Bst4CI ACNGT 5 cut(s) 82, 999, 1240, 1253, 1988
Bst6I CTCTTC 3 cut(s) 116, 636, 1554
BstACI GRCGYC 1 cut(s) 74
BstAPI GCANNNNNTGC 3 cut(s) 11, 623, 1388
BstBAI YACGTR 2 cut(s) 419, 1850
BstBI TTCGAA 1 cut(s) 1936
BstC8I GCNNGC 3 cut(s) 264, 654, 933
BstDEI CTNAG 5 cut(s) 576, 627, 669, 1167, 1286
BstDSI CCRYGG 2 cut(s) 1102, 1210
BstENI CCTNNNNNAGG 1 cut(s) 893
BstF5I GGATG 2 cut(s) 613, 743
BstHHI GCGC 3 cut(s) 262, 1299, 1311
BstMAI GTCTC 4 cut(s) 38, 1130, 1605, 2010
BstMCI CGRYCG 1 cut(s) 1864
BstMWI GCNNNNNNNGC 8 cut(s) 11, 23, 623, 986, 1262, 1382, 1388, 1839
BstNI CCWGG 5 cut(s) 247, 583, 734, 1080, 1616
BstNSI RCATGY 1 cut(s) 1391
BstSCI CCNGG 6 cut(s) 245, 474, 581, 732, 1078, 1614
BstSFI CTRYAG 3 cut(s) 1059, 1629, 1735
BstSLI GKGCMC 1 cut(s) 1521
BstV1I GCAGC 7 cut(s) 433, 610, 947, 1394, 1643, 1916, 2042
BstX2I RGATCY 6 cut(s) 634, 1075, 1624, 1689, 1873, 2044
BstYI RGATCY 6 cut(s) 634, 1075, 1624, 1689, 1873, 2044
BstZ17I GTATAC 1 cut(s) 1858
BsuRI GGCC 5 cut(s) 224, 581, 708, 777, 1585
BtgI CCRYGG 2 cut(s) 1102, 1210
BtgZI GCGATG 1 cut(s) 1218
BtrI CACGTC 1 cut(s) 1124
BtsCI GGATG 2 cut(s) 613, 743
BtsI GCAGTG 1 cut(s) 1798
BtsIMutI CAGTG 2 cut(s) 857, 1798
BveI ACCTGC 1 cut(s) 1063
Cac8I GCNNGC 3 cut(s) 264, 654, 933
CaiI CAGNNNCTG 1 cut(s) 458
CfoI GCGC 3 cut(s) 262, 1299, 1311
Cfr13I GGNCC 3 cut(s) 478, 776, 1886
Csp6I GTAC 7 cut(s) 179, 995, 1099, 1179, 1249, 1651, 1923
CviAII CATG 9 cut(s) 97, 124, 327, 505, 977, 1103, 1211, 1306, 1388
CviQI GTAC 7 cut(s) 179, 995, 1099, 1179, 1249, 1651, 1923
DdeI CTNAG 5 cut(s) 576, 627, 669, 1167, 1286
Eam1104I CTCTTC 3 cut(s) 116, 636, 1554
EarI CTCTTC 3 cut(s) 116, 636, 1554
Ecl136II GAGCTC 1 cut(s) 201
Eco130I CCWWGG 3 cut(s) 1102, 1210, 1977
Eco147I AGGCCT 2 cut(s) 224, 581
Eco24I GRGCYC 2 cut(s) 203, 976
Eco31I GGTCTC 2 cut(s) 1605, 2010
Eco47I GGWCC 2 cut(s) 478, 1886
Eco53kI GAGCTC 1 cut(s) 201
Eco57I CTGAAG 2 cut(s) 435, 480
EcoICRI GAGCTC 1 cut(s) 201
EcoNI CCTNNNNNAGG 1 cut(s) 893
EcoO109I RGGNCCY 1 cut(s) 776
EcoRI GAATTC 1 cut(s) 250
EcoRII CCWGG 5 cut(s) 245, 581, 732, 1078, 1614
EcoT14I CCWWGG 3 cut(s) 1102, 1210, 1977
EcoT38I GRGCYC 2 cut(s) 203, 976
ErhI CCWWGG 3 cut(s) 1102, 1210, 1977
Esp3I CGTCTC 2 cut(s) 38, 1130
FaeI CATG 9 cut(s) 100, 127, 330, 508, 980, 1106, 1214, 1309, 1391
FalI AAGNNNNNCTT 2 cut(s) 873, 905
FaqI GGGAC 1 cut(s) 1872
FatI CATG 9 cut(s) 96, 123, 326, 504, 976, 1102, 1210, 1305, 1387
FauNDI CATATG 1 cut(s) 1595
FbaI TGATCA 1 cut(s) 565
FblI GTMKAC 2 cut(s) 77, 1857
FokI GGATG 2 cut(s) 620, 750
FriOI GRGCYC 2 cut(s) 203, 976
FspBI CTAG 6 cut(s) 278, 437, 489, 653, 875, 1878
FspI TGCGCA 2 cut(s) 1298, 1310
GlaI GCGC 3 cut(s) 261, 1298, 1310
GsaI CCCAGC 1 cut(s) 1230
HaeIII GGCC 5 cut(s) 224, 581, 708, 777, 1585
HapII CCGG 3 cut(s) 476, 684, 2025
HhaI GCGC 3 cut(s) 262, 1299, 1311
Hin1I GRCGYC 1 cut(s) 74
Hin1II CATG 9 cut(s) 100, 127, 330, 508, 980, 1106, 1214, 1309, 1391
Hin6I GCGC 3 cut(s) 260, 1297, 1309
HinP1I GCGC 3 cut(s) 260, 1297, 1309
HincII GTYRAC 1 cut(s) 78
HindII GTYRAC 1 cut(s) 78
HindIII AAGCTT 1 cut(s) 409
HpaII CCGG 3 cut(s) 476, 684, 2025
HphI GGTGA 4 cut(s) 416, 1672, 1724, 1993
Hpy166II GTNNAC 5 cut(s) 78, 827, 1099, 1858, 1984
Hpy8I GTNNAC 5 cut(s) 78, 827, 1099, 1858, 1984
Hpy99I CGWCG 5 cut(s) 43, 55, 79, 82, 179
HpyCH4III ACNGT 5 cut(s) 82, 999, 1240, 1253, 1988
HpyCH4IV ACGT 9 cut(s) 74, 177, 234, 418, 1123, 1184, 1537, 1801, 1849
HpyCH4V TGCA 8 cut(s) 809, 935, 989, 1052, 1192, 1391, 1631, 1798
HpyF10VI GCNNNNNNNGC 8 cut(s) 11, 23, 623, 986, 1262, 1382, 1388, 1839
HpyF3I CTNAG 5 cut(s) 576, 627, 669, 1167, 1286
HpySE526I ACGT 9 cut(s) 74, 177, 234, 418, 1123, 1184, 1537, 1801, 1849
Hsp92I GRCGYC 1 cut(s) 74
Hsp92II CATG 9 cut(s) 100, 127, 330, 508, 980, 1106, 1214, 1309, 1391
HspAI GCGC 3 cut(s) 260, 1297, 1309
KpnI GGTACC 1 cut(s) 1926
Ksp22I TGATCA 1 cut(s) 565
LmnI GCTCC 7 cut(s) 206, 271, 361, 552, 928, 943, 2027
Lsp1109I GCAGC 7 cut(s) 433, 610, 947, 1394, 1643, 1916, 2042
LweI GCATC 4 cut(s) 1195, 1705, 1842, 2042
MaeI CTAG 6 cut(s) 278, 437, 489, 653, 875, 1878
MaeII ACGT 9 cut(s) 74, 177, 234, 418, 1123, 1184, 1537, 1801, 1849
MaeIII GTNAC 5 cut(s) 855, 1240, 1538, 1552, 1948
MfeI CAATTG 2 cut(s) 1193, 1955
MflI RGATCY 6 cut(s) 634, 1075, 1624, 1689, 1873, 2044
MhlI GDGCHC 4 cut(s) 203, 545, 976, 1521
MlyI GAGTC 5 cut(s) 202, 449, 863, 1352, 2105
MroXI GAANNNNTTC 1 cut(s) 645
MseI TTAA 3 cut(s) 534, 1130, 1395
MspA1I CMGCKG 1 cut(s) 1355
MspI CCGG 3 cut(s) 476, 684, 2025
MspR9I CCNGG 6 cut(s) 247, 476, 583, 734, 1080, 1616
MunI CAATTG 2 cut(s) 1193, 1955
MvaI CCWGG 5 cut(s) 247, 583, 734, 1080, 1616
MwoI GCNNNNNNNGC 8 cut(s) 11, 23, 623, 986, 1262, 1382, 1388, 1839
NciI CCSGG 1 cut(s) 476
NcoI CCATGG 2 cut(s) 1102, 1210
NdeI CATATG 1 cut(s) 1595
NheI GCTAGC 1 cut(s) 652
NlaIII CATG 9 cut(s) 100, 127, 330, 508, 980, 1106, 1214, 1309, 1391
NlaIV GGNNCC 5 cut(s) 778, 1761, 1888, 1924, 2107
NmuCI GTSAC 1 cut(s) 855
NsbI TGCGCA 2 cut(s) 1298, 1310
NspI RCATGY 1 cut(s) 1391
NspV TTCGAA 1 cut(s) 1936
PaqCI CACCTGC 1 cut(s) 1063
PasI CCCWGGG 1 cut(s) 733
PceI AGGCCT 2 cut(s) 224, 581
PcsI WCGNNNNNNNCGW 3 cut(s) 47, 53, 71
PdmI GAANNNNTTC 1 cut(s) 645
Ple19I CGATCG 1 cut(s) 1864
PleI GAGTC 5 cut(s) 201, 448, 862, 1351, 2105
PpsI GAGTC 5 cut(s) 201, 448, 862, 1351, 2105
Ppu21I YACGTR 2 cut(s) 419, 1850
PsiI TTATAA 1 cut(s) 287
Psp124BI GAGCTC 1 cut(s) 203
Psp1406I AACGTT 1 cut(s) 234
Psp6I CCWGG 5 cut(s) 245, 581, 732, 1078, 1614
PspFI CCCAGC 1 cut(s) 1226
PspGI CCWGG 5 cut(s) 245, 581, 732, 1078, 1614
PspN4I GGNNCC 5 cut(s) 778, 1761, 1888, 1924, 2107
PspPI GGNCC 3 cut(s) 478, 776, 1886
PstI CTGCAG 1 cut(s) 1633
PstNI CAGNNNCTG 1 cut(s) 458
PsuI RGATCY 6 cut(s) 634, 1075, 1624, 1689, 1873, 2044
PvuI CGATCG 1 cut(s) 1864
PvuII CAGCTG 1 cut(s) 1355
RsaI GTAC 7 cut(s) 180, 996, 1100, 1180, 1250, 1652, 1924
RsaNI GTAC 7 cut(s) 179, 995, 1099, 1179, 1249, 1651, 1923
SacI GAGCTC 1 cut(s) 203
SalI GTCGAC 1 cut(s) 76
SaqAI TTAA 3 cut(s) 534, 1130, 1395
Sau96I GGNCC 3 cut(s) 478, 776, 1886
SchI GAGTC 5 cut(s) 202, 449, 863, 1352, 2105
ScrFI CCNGG 6 cut(s) 247, 476, 583, 734, 1080, 1616
SduI GDGCHC 4 cut(s) 203, 545, 976, 1521
SfaNI GCATC 4 cut(s) 1195, 1705, 1842, 2042
SfcI CTRYAG 3 cut(s) 1059, 1629, 1735
SfuI TTCGAA 1 cut(s) 1936
SgrDI CGTCGACG 1 cut(s) 76
SinI GGWCC 2 cut(s) 478, 1886
SmlI CTYRAG 1 cut(s) 2040
SmoI CTYRAG 1 cut(s) 2040
SseBI AGGCCT 2 cut(s) 224, 581
SsiI CCGC 4 cut(s) 14, 17, 120, 2020
SspI AATATT 1 cut(s) 1448
SspMI CTAG 6 cut(s) 278, 437, 489, 653, 875, 1878
SstI GAGCTC 1 cut(s) 203
StuI AGGCCT 2 cut(s) 224, 581
StyD4I CCNGG 6 cut(s) 245, 474, 581, 732, 1078, 1614
StyI CCWWGG 3 cut(s) 1102, 1210, 1977
TaaI ACNGT 5 cut(s) 82, 999, 1240, 1253, 1988
TaiI ACGT 9 cut(s) 77, 180, 237, 421, 1126, 1187, 1540, 1804, 1852
TaqI TCGA 7 cut(s) 77, 295, 639, 1140, 1331, 1609, 1936
TaqII GACCGA 1 cut(s) 1526
TatI WGTACW 3 cut(s) 994, 1178, 1650
TauI GCSGC 3 cut(s) 17, 20, 122
Tru1I TTAA 3 cut(s) 534, 1130, 1395
Tru9I TTAA 3 cut(s) 534, 1130, 1395
TscAI CASTG 2 cut(s) 864, 1798
TseFI GTSAC 1 cut(s) 855
TseI GCWGC 7 cut(s) 446, 623, 935, 1382, 1631, 1904, 2030
Tsp45I GTSAC 1 cut(s) 855
TspDTI ATGAA 8 cut(s) 783, 881, 934, 1350, 1374, 1497, 1680, 2103
TspGWI ACGGA 2 cut(s) 56, 193
TspRI CASTG 2 cut(s) 864, 1798
VpaK11BI GGWCC 2 cut(s) 478, 1886
XagI CCTNNNNNAGG 1 cut(s) 893
XapI RAATTY 2 cut(s) 250, 1324
XceI RCATGY 1 cut(s) 1391
XcmI CCANNNNNNNNNTGG 2 cut(s) 1593, 1897
XmiI GTMKAC 2 cut(s) 77, 1857
XmnI GAANNNNTTC 1 cut(s) 645
XspI CTAG 6 cut(s) 278, 437, 489, 653, 875, 1878
ZraI GACGTC 1 cut(s) 75
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.