Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr6

Orthogroup ID

OG0005502

Physical Location & Seq

Genomic Coordinates Forward (+)

21366880 .. 21373354

Gene Structure 6475 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom06g17360.12

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2157 bp

ATGCACGGCAGTCTCTTCGTCACTCTCTTCTTTGCAACCGGAACCAGAAATTTTCCGCTGCGGTTGAGCTCCATGGTAAAGCCTGCGTCTCCGGCCGCGACGAAGTCGACGGCGTCGGTAATCAAAGCCTACTCTTTGCCTCTGATTCTCTTCGCTGCCGCCATGTTCTTCCAGCTCTTCGTTATTCCCAAATCCTTCCCTCCCTCTCATTACGATATTCTTGGTATAAGGAGCTATAGCTCCATTGAAGAAGTGAAAGAGGCGTATGAAAATATTTCTTCAGTCTGGAATTCAGACGGGCAGGCTCCGGATACTTCCGATTTTATCAAGATTCAATATGCTTTTGAGTTGCTGGCAAATCCAGTGTGGAAAAGAAACTATGACATATTCGGCATCGATGAGCAAATAGATGTGGTTGAGAAGGTCACAGAGCAATATAAAGGAGAAAGCTTTTCGAAGATAGACCTTCCTTTGCTAGAGTCTGTTGCTTATGAAACCGAAGACCATGATGGTACAGTCATGACCTCCAAGGATTTTCAGACTATGTTCGAGGGTAACAAACCATGGCTGATTCAGGTGTGCTCATTTGGGAGCAAAAGCTACTATCAGTTTTCTGATGTGTGGAAGAAAATTGCTGTTTTTCTGAATGGTGTGGCAAATACTGGTATGTTGGAACTTGGAGAGCTTCAGCTAGCGACACATTTTGCTGAGAGAAAACCAACTGGACAACCTTTCTTCAGGAATGGCATTCCTTCTCTTGTTGCTTTTCCGCCGGGGTGTAAAACTGCCAATTGTTTTATTAGGTATGAAGGAGATCTCTCTGTTGATTCAATCACAGATTGGTTTGCAACAACCATACTTGGTTTGCCTCGTATTCTTTACTACTCAAAGGAGACACTGGGGCAGAAGTTTCTAGCAAAAGTTAGTCTTCATAAGGTAAGAGTCATTTTCTTCTCAAAAACGGGGGTGCGTGCTGCTCCATTCATACGCCAAGCTGCTAAAAATTATTGGGCTCATGCTTCTTTTGCATTCGTGTTGTGGCAAGAAGAGGAATCTTCCTTTTGGTTTAATTCGTTTGAGGTGGAATCTGCACCTGCTATAGTGATTTTGAAAGATCCTGGTGTCAAACCTGTTGTGTACCACGGATCTTTTGACTACTCACAGTTCTTAAATATTATGGAGCAAAATAAACAACAAGAGCTACCTCAGTTGAGGAGTACGACATCCATGGAATTGGGTTGTGATTCTCGAGGTTATTCTCGTGCTGGATATGATACCGTTACTTGGTACTGTGCTGTTGTAGCAGGGAGGCATAGCCCAGAACTCAGTAACATGCGTGGAGCCATTCGCAGGGTTCAAGAGAAATTGTCAAATGAAGTCGAGTCAAGGTCAGCTGATGAAGTGCAATCTATAGCACCAGCAGCAGAAGCGCTTAAAAGCAAACGACTGACATTTGCTTGGCTTGACGGAGAATCCCAAAAGAAATATTGCCTCTTCTTCCTCCAATCTGAGAACAGCCATGAAACTTGTGGAGAAAGGACAGATATGACCGATGTTCCTCAGTTATTTATTGTACGCTATAAGAGGAATGTGACAGAAGAGAGTGAGAAGCCCGAGAAGAAGCCGAAAAGCATATGGGATGCAGTGCAAGACCAGGAATTAGATCCTGCATCACAGCTTGTGGCAAAGTACAATGGTTCAGATGATACTCAGGAGATTACTAAATGGATCTCGCAAATAATCAATGATGGCGACTCCAGAGATCTTCCTCATTATAGAACAAGAACTCCTCATTTGGTTCCTGAGGATTCAGAGCCAATATGGTCAGCCGGTGTCCAAAGAATTCCTTCAACAAACACGATCATGCAGAGCATCCGTGGAATGCTACGTGGAGTCTATGATCGCGTTGGAGATCCAAGGCTTGGTCCAATGCTGCTTCTAGCCGCATTGATGTCTTTCGGTACCATCTGGCTTCGGAGGAGTCAAGCAACTCCAGTGTCTAGTCAACCAAATCAGCCAAATTCCAAGGATGAAAGTAGACGAAGAAGGAGAGACCGGGCTAGAAACGTGCTTAATCAAGACCTACCCCCTTCCATCACCGATATGGAACCAAGAGACTCTTATGAAATGCCACTGTCAGGTTCCGACTCCGAGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0001671 GO:0001932 GO:0001933 GO:0003674 GO:0003824 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005788 GO:0006457 GO:0006508 GO:0006511 GO:0006807 GO:0006915 GO:0006950 GO:0007154 GO:0007165 GO:0008047 GO:0008150 GO:0008152 GO:0008219 GO:0009056 GO:0009057 GO:0009892 GO:0009987 GO:0010033 GO:0010243 GO:0010498 GO:0010563 GO:0010605 GO:0012501 GO:0012505 GO:0015035 GO:0015036 GO:0016491 GO:0016667 GO:0016671 GO:0019220 GO:0019222 GO:0019538 GO:0019899 GO:0019941 GO:0023052 GO:0030163 GO:0030234 GO:0030433 GO:0030544 GO:0031072 GO:0031323 GO:0031324 GO:0031399 GO:0031400 GO:0031974 GO:0032268 GO:0032269 GO:0032781 GO:0032991 GO:0033554 GO:0034663 GO:0034975 GO:0034976 GO:0035556 GO:0036503 GO:0042221 GO:0042325 GO:0042326 GO:0043085 GO:0043161 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043462 GO:0043632 GO:0044093 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044422 GO:0044424 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0045936 GO:0048519 GO:0048523 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051087 GO:0051117 GO:0051171 GO:0051172 GO:0051174 GO:0051246 GO:0051248 GO:0051336 GO:0051345 GO:0051603 GO:0051716 GO:0051787 GO:0055114 GO:0060255 GO:0060589 GO:0060590 GO:0065007 GO:0065009 GO:0070013 GO:0070059 GO:0071704 GO:0080090 GO:0097190 GO:0097193 GO:0098772 GO:1901564 GO:1901565 GO:1901575 GO:1901698

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

DnaJ

Protein Analysis

719

Amino Acids

81.33

Weight (kDa)

5.92

Isoelectric Point (pI)

51.22

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005502)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G18700 AT1G18700 AT1G18700 AT1G18700 AT1G18700 AT1G18700
fragaria_vesca	FvH4_5g14650 FvH4_5g14650 FvH4_5g14650 FvH4_5g14650 FvH4_5g14650
malus_domestica	MD06G1196700.v1.1 MD14G1203300.v1.1 MD14G1203500.v1.1
prunus_persica	Prupe.5G196200_v2.0.a1
pyrus_communis	pycom06g17360
rosa_chinensis	RchiOBHm_Chr7g0181841
rosa_laevigata	RLG00000005170
rosa_multiflora	Rmu_sc0007912.1_g000002 Rmu_sc0021327.1_g000003
rosa_roxburghii	Rroxscaffold_3G00271710
rosa_rugosa	Rorug06G0444000 Rorug06G0444400
rosa_samantha	Rh3DG296800 Rh7AG046600 Rh7BG046200 Rh7CG046700 Rh7DG045800
rosa_wichuraiana	Rw7G003850

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1102
Acc36I	ACCTGC	1 cut(s)	1102
Acc65I	GGTACC	1 cut(s)	1961
AccB1I	GGYRCC	1 cut(s)	1961
AccB7I	CCANNNNNTGG	1 cut(s)	1922
AccI	GTMKAC	2 cut(s)	107, 2038
AccII	CGCG	2 cut(s)	98, 1905
AccIII	TCCGGA	1 cut(s)	307
AciI	CCGC	6 cut(s)	56, 61, 96, 159, 770, 1944
AclWI	GGATC	5 cut(s)	1109, 1153, 1658, 1736, 1907
AcoI	YGGCCR	1 cut(s)	93
AcsI	RAATTY	4 cut(s)	49, 289, 1842, 2020
AcuI	CTGAAG	3 cut(s)	264, 671, 721
AcyI	GRCGYC	1 cut(s)	113
AfaI	GTAC	7 cut(s)	514, 1139, 1219, 1289, 1575, 1691, 1963
AfeI	AGCGCT	1 cut(s)	1431
AfiI	CCNNNNNNNGG	4 cut(s)	1284, 1350, 1922, 2138
AgsI	TTSAA	6 cut(s)	248, 335, 831, 1111, 1358, 1851
AjnI	CCWGG	2 cut(s)	1117, 1653
AloI	GAACNNNNNNTCC	2 cut(s)	1771, 1803
Alw21I	GWGCWC	2 cut(s)	71, 584
Alw26I	GTCTC	5 cut(s)	17, 93, 887, 2046, 2109
AlwI	GGATC	5 cut(s)	1109, 1153, 1658, 1736, 1907
Ama87I	CYCGRG	2 cut(s)	1248, 1613
Aor13HI	TCCGGA	1 cut(s)	307
Aor51HI	AGCGCT	1 cut(s)	1431
AoxI	GGCC	1 cut(s)	93
ApeKI	GCWGC	6 cut(s)	58, 155, 974, 995, 1421, 1933
ApoI	RAATTY	4 cut(s)	49, 289, 1842, 2020
Asp700I	GAANNNNTTC	1 cut(s)	1846
Asp718I	GGTACC	1 cut(s)	1961
AspLEI	GCGC	1 cut(s)	1432
AspS9I	GGNCC	1 cut(s)	1925
AsuC2I	CCSGG	2 cut(s)	774, 2057
AsuHPI	GGTGA	1 cut(s)	2089
AsuII	TTCGAA	1 cut(s)	455
AsuNHI	GCTAGC	1 cut(s)	691
AvaI	CYCGRG	2 cut(s)	1248, 1613
AvaII	GGWCC	1 cut(s)	1925
AxyI	CCTNAGG	1 cut(s)	1803
BanI	GGYRCC	1 cut(s)	1961
BanII	GRGCYC	2 cut(s)	71, 1015
BauI	CACGAG	1 cut(s)	1260
BbsI	GAAGAC	2 cut(s)	507, 920
Bbv12I	GWGCWC	2 cut(s)	71, 584
BbvI	GCAGC	6 cut(s)	45, 142, 961, 982, 1433, 1920
BccI	CCATC	4 cut(s)	503, 1742, 1973, 2102
BceAI	ACGGC	2 cut(s)	22, 126
BcgI	CGANNNNNNTGC	1 cut(s)	32
BciT130I	CCWGG	2 cut(s)	1119, 1655
BciVI	GTATCC	1 cut(s)	304
BcnI	CCSGG	2 cut(s)	774, 2057
BcoDI	GTCTC	5 cut(s)	17, 93, 887, 2046, 2109
BfaI	CTAG	6 cut(s)	476, 692, 914, 1940, 2001, 2061
BfmI	CTRYAG	3 cut(s)	235, 1098, 1410
BfoI	RGCGCY	1 cut(s)	1433
BfuAI	ACCTGC	1 cut(s)	1102
BfuI	GTATCC	1 cut(s)	304
BglII	AGATCT	2 cut(s)	814, 1762
BisI	GCNGC	9 cut(s)	59, 96, 156, 159, 975, 996, 1422, 1934, 1944
BlsI	GCNGC	9 cut(s)	60, 97, 157, 160, 976, 997, 1423, 1935, 1945
Bme1390I	CCNGG	4 cut(s)	774, 1119, 1655, 2057
Bme18I	GGWCC	1 cut(s)	1925
BmeT110I	CYCGRG	2 cut(s)	1248, 1613
BmgT120I	GGNCC	1 cut(s)	1925
BmiI	GGNNCC	7 cut(s)	43, 306, 1342, 1800, 1963, 2109, 2143
BmrFI	CCNGG	4 cut(s)	774, 1119, 1655, 2057
BmrI	ACTGGG	1 cut(s)	908
BmsI	GCATC	4 cut(s)	402, 1630, 1679, 1881
BmtI	GCTAGC	1 cut(s)	695
BmuI	ACTGGG	1 cut(s)	908
BpiI	GAAGAC	2 cut(s)	507, 920
BpmI	CTGGAG	2 cut(s)	1741, 1977
Bpu14I	TTCGAA	1 cut(s)	455
BpuMI	CCSGG	2 cut(s)	774, 2057
Bsa29I	ATCGAT	1 cut(s)	396
BsaAI	YACGTR	1 cut(s)	1889
BsaHI	GRCGYC	1 cut(s)	113
BsaI	GGTCTC	1 cut(s)	2046
BsaJI	CCNNGG	9 cut(s)	72, 528, 563, 773, 1141, 1227, 1876, 1916, 2025
BsaWI	WCCGGW	2 cut(s)	38, 307
BsaXI	ACNNNNNCTCC	2 cut(s)	1771, 1801
Bsc4I	CCNNNNNNNGG	4 cut(s)	1284, 1350, 1922, 2138
Bse118I	RCCGGY	1 cut(s)	1829
Bse1I	ACTGG	5 cut(s)	362, 667, 727, 903, 1994
Bse21I	CCTNAGG	1 cut(s)	1803
BseAI	TCCGGA	1 cut(s)	307
BseBI	CCWGG	2 cut(s)	1119, 1655
BseCI	ATCGAT	1 cut(s)	396
BseDI	CCNNGG	9 cut(s)	72, 528, 563, 773, 1141, 1227, 1876, 1916, 2025
BseGI	GGATG	4 cut(s)	1223, 1645, 1872, 2035
BseLI	CCNNNNNNNGG	4 cut(s)	1284, 1350, 1922, 2138
BseMII	CTCAG	7 cut(s)	699, 1220, 1339, 1500, 1574, 1724, 1794
BseNI	ACTGG	5 cut(s)	362, 667, 727, 903, 1994
BseRI	GAGGAG	3 cut(s)	1228, 1779, 1993
BseX3I	CGGCCG	1 cut(s)	93
BseXI	GCAGC	6 cut(s)	45, 142, 961, 982, 1433, 1920
BsgI	GTGCAG	1 cut(s)	1074
Bsh1236I	CGCG	2 cut(s)	98, 1905
Bsh1285I	CGRYCG	1 cut(s)	96
BshFI	GGCC	1 cut(s)	95
BshNI	GGYRCC	1 cut(s)	1961
BshVI	ATCGAT	1 cut(s)	396
BsiEI	CGRYCG	1 cut(s)	96
BsiHKAI	GWGCWC	2 cut(s)	71, 584
BsiHKCI	CYCGRG	2 cut(s)	1248, 1613
BsiSI	CCGG	6 cut(s)	39, 92, 308, 773, 1830, 2056
BslI	CCNNNNNNNGG	4 cut(s)	1284, 1350, 1922, 2138
BsmAI	GTCTC	5 cut(s)	17, 93, 887, 2046, 2109
BsmBI	CGTCTC	1 cut(s)	93
BsmI	GAATGC	3 cut(s)	747, 1028, 1887
BsnI	GGCC	1 cut(s)	95
Bso31I	GGTCTC	1 cut(s)	2046
BsoBI	CYCGRG	2 cut(s)	1248, 1613
Bsp119I	TTCGAA	1 cut(s)	455
Bsp1286I	GDGCHC	3 cut(s)	71, 584, 1015
Bsp13I	TCCGGA	1 cut(s)	307
Bsp143I	GATC	9 cut(s)	814, 1114, 1145, 1663, 1728, 1762, 1860, 1900, 1912
Bsp19I	CCATGG	3 cut(s)	72, 563, 1227
BspACI	CCGC	6 cut(s)	56, 61, 96, 159, 770, 1944
BspANI	GGCC	1 cut(s)	95
BspCNI	CTCAG	7 cut(s)	700, 1219, 1338, 1501, 1573, 1723, 1795
BspDI	ATCGAT	1 cut(s)	396
BspEI	TCCGGA	1 cut(s)	307
BspFNI	CGCG	2 cut(s)	98, 1905
BspHI	TCATGA	1 cut(s)	519
BspLI	GGNNCC	7 cut(s)	43, 306, 1342, 1800, 1963, 2109, 2143
BspMI	ACCTGC	1 cut(s)	1102
BspOI	GCTAGC	1 cut(s)	695
BspPI	GGATC	5 cut(s)	1109, 1153, 1658, 1736, 1907
BspQI	GCTCTTC	1 cut(s)	182
BspT104I	TTCGAA	1 cut(s)	455
BspT107I	GGYRCC	1 cut(s)	1961
BspTNI	GGTCTC	1 cut(s)	2046
BsrFI	RCCGGY	1 cut(s)	1829
BsrI	ACTGG	5 cut(s)	362, 667, 727, 903, 1994
BssAI	RCCGGY	1 cut(s)	1829
BssECI	CCNNGG	9 cut(s)	72, 528, 563, 773, 1141, 1227, 1876, 1916, 2025
BssMI	GATC	9 cut(s)	814, 1114, 1145, 1663, 1728, 1762, 1860, 1900, 1912
BssNI	GRCGYC	1 cut(s)	113
BssSI	CACGAG	1 cut(s)	1260
BssT1I	CCWWGG	6 cut(s)	72, 528, 563, 1227, 1916, 2025
Bst2BI	CACGAG	1 cut(s)	1260
Bst2UI	CCWGG	2 cut(s)	1119, 1655
Bst4CI	ACNGT	5 cut(s)	517, 1164, 1279, 1292, 2136
Bst6I	CTCTTC	7 cut(s)	20, 32, 155, 182, 1041, 1499, 1593
BstACI	GRCGYC	1 cut(s)	113
BstBAI	YACGTR	1 cut(s)	1889
BstBI	TTCGAA	1 cut(s)	455
BstC8I	GCNNGC	5 cut(s)	84, 303, 354, 693, 972
BstDEI	CTNAG	7 cut(s)	708, 1206, 1325, 1509, 1560, 1710, 1803
BstDSI	CCRYGG	5 cut(s)	72, 563, 1141, 1227, 1876
BstF5I	GGATG	4 cut(s)	1223, 1645, 1872, 2035
BstFNI	CGCG	2 cut(s)	98, 1905
BstH2I	RGCGCY	1 cut(s)	1433
BstHHI	GCGC	1 cut(s)	1432
BstKTI	GATC	9 cut(s)	817, 1117, 1148, 1666, 1731, 1765, 1863, 1903, 1915
BstMAI	GTCTC	5 cut(s)	17, 93, 887, 2046, 2109
BstMBI	GATC	9 cut(s)	814, 1114, 1145, 1663, 1728, 1762, 1860, 1900, 1912
BstMCI	CGRYCG	1 cut(s)	96
BstMWI	GCNNNNNNNGC	5 cut(s)	92, 1025, 1301, 1421, 1427
BstNI	CCWGG	2 cut(s)	1119, 1655
BstNSI	RCATGY	1 cut(s)	1336
BstSCI	CCNGG	4 cut(s)	772, 1117, 1653, 2055
BstSFI	CTRYAG	3 cut(s)	235, 1098, 1410
BstUI	CGCG	2 cut(s)	98, 1905
BstV1I	GCAGC	6 cut(s)	45, 142, 961, 982, 1433, 1920
BstV2I	GAAGAC	2 cut(s)	507, 920
BstX2I	RGATCY	7 cut(s)	814, 1114, 1145, 1663, 1728, 1762, 1912
BstXI	CCANNNNNNTGG	1 cut(s)	1234
BstYI	RGATCY	7 cut(s)	814, 1114, 1145, 1663, 1728, 1762, 1912
BstZI	CGGCCG	1 cut(s)	93
Bsu15I	ATCGAT	1 cut(s)	396
Bsu36I	CCTNAGG	1 cut(s)	1803
BsuI	GTATCC	1 cut(s)	304
BsuRI	GGCC	1 cut(s)	95
BsuTUI	ATCGAT	1 cut(s)	396
BtgI	CCRYGG	5 cut(s)	72, 563, 1141, 1227, 1876
BtsCI	GGATG	4 cut(s)	1223, 1645, 1872, 2035
BtsI	GCAGTG	1 cut(s)	1650
BtsIMutI	CAGTG	5 cut(s)	369, 896, 1650, 2001, 2132
BveI	ACCTGC	1 cut(s)	1102
Cac8I	GCNNGC	5 cut(s)	84, 303, 354, 693, 972
CciI	TCATGA	1 cut(s)	519
CfoI	GCGC	1 cut(s)	1432
Cfr10I	RCCGGY	1 cut(s)	1829
Cfr13I	GGNCC	1 cut(s)	1925
ClaI	ATCGAT	1 cut(s)	396
CseI	GACGC	2 cut(s)	75, 102
Csp6I	GTAC	7 cut(s)	513, 1138, 1218, 1288, 1574, 1690, 1962
CviQI	GTAC	7 cut(s)	513, 1138, 1218, 1288, 1574, 1690, 1962
DdeI	CTNAG	7 cut(s)	708, 1206, 1325, 1509, 1560, 1710, 1803
DpnI	GATC	9 cut(s)	816, 1116, 1147, 1665, 1730, 1764, 1862, 1902, 1914
DpnII	GATC	9 cut(s)	814, 1114, 1145, 1663, 1728, 1762, 1860, 1900, 1912
EaeI	YGGCCR	1 cut(s)	93
EagI	CGGCCG	1 cut(s)	93
Eam1104I	CTCTTC	7 cut(s)	20, 32, 155, 182, 1041, 1499, 1593
EarI	CTCTTC	7 cut(s)	20, 32, 155, 182, 1041, 1499, 1593
EciI	GGCGGA	1 cut(s)	759
Ecl136II	GAGCTC	1 cut(s)	69
EclXI	CGGCCG	1 cut(s)	93
Eco130I	CCWWGG	6 cut(s)	72, 528, 563, 1227, 1916, 2025
Eco24I	GRGCYC	2 cut(s)	71, 1015
Eco31I	GGTCTC	1 cut(s)	2046
Eco47I	GGWCC	1 cut(s)	1925
Eco47III	AGCGCT	1 cut(s)	1431
Eco52I	CGGCCG	1 cut(s)	93
Eco53kI	GAGCTC	1 cut(s)	69
Eco57I	CTGAAG	3 cut(s)	264, 671, 721
Eco81I	CCTNAGG	1 cut(s)	1803
Eco88I	CYCGRG	2 cut(s)	1248, 1613
EcoICRI	GAGCTC	1 cut(s)	69
EcoRI	GAATTC	2 cut(s)	289, 1842
EcoRII	CCWGG	2 cut(s)	1117, 1653
EcoT14I	CCWWGG	6 cut(s)	72, 528, 563, 1227, 1916, 2025
EcoT38I	GRGCYC	2 cut(s)	71, 1015
ErhI	CCWWGG	6 cut(s)	72, 528, 563, 1227, 1916, 2025
Esp3I	CGTCTC	1 cut(s)	93
FalI	AAGNNNNNCTT	6 cut(s)	912, 944, 1831, 1863, 2104, 2136
FauNDI	CATATG	1 cut(s)	1634
FblI	GTMKAC	2 cut(s)	107, 2038
Fnu4HI	GCNGC	9 cut(s)	59, 96, 156, 159, 975, 996, 1422, 1934, 1944
FokI	GGATG	4 cut(s)	1210, 1652, 1859, 2042
FriOI	GRGCYC	2 cut(s)	71, 1015
Fsp4HI	GCNGC	9 cut(s)	59, 96, 156, 159, 975, 996, 1422, 1934, 1944
FspBI	CTAG	6 cut(s)	476, 692, 914, 1940, 2001, 2061
GlaI	GCGC	1 cut(s)	1431
GluI	GCNGC	9 cut(s)	59, 96, 156, 159, 975, 996, 1422, 1934, 1944
GsuI	CTGGAG	2 cut(s)	1741, 1977
HaeII	RGCGCY	1 cut(s)	1433
HaeIII	GGCC	1 cut(s)	95
HapII	CCGG	6 cut(s)	39, 92, 308, 773, 1830, 2056
HgaI	GACGC	2 cut(s)	75, 102
HhaI	GCGC	1 cut(s)	1432
Hin1I	GRCGYC	1 cut(s)	113
Hin6I	GCGC	1 cut(s)	1430
HinP1I	GCGC	1 cut(s)	1430
HincII	GTYRAC	2 cut(s)	108, 2006
HindII	GTYRAC	2 cut(s)	108, 2006
HindIII	AAGCTT	1 cut(s)	448
HpaII	CCGG	6 cut(s)	39, 92, 308, 773, 1830, 2056
HphI	GGTGA	1 cut(s)	2089
Hpy166II	GTNNAC	4 cut(s)	108, 1138, 2006, 2039
Hpy8I	GTNNAC	4 cut(s)	108, 1138, 2006, 2039
Hpy99I	CGWCG	3 cut(s)	103, 112, 118
HpyAV	CCTTC	8 cut(s)	205, 415, 476, 762, 803, 1857, 2040, 2100
HpyCH4III	ACNGT	5 cut(s)	517, 1164, 1279, 1292, 2136
HpyCH4IV	ACGT	2 cut(s)	1888, 2067
HpyF10VI	GCNNNNNNNGC	5 cut(s)	92, 1025, 1301, 1421, 1427
HpyF3I	CTNAG	7 cut(s)	708, 1206, 1325, 1509, 1560, 1710, 1803
HpySE526I	ACGT	2 cut(s)	1888, 2067
Hsp92I	GRCGYC	1 cut(s)	113
HspAI	GCGC	1 cut(s)	1430
Kpn2I	TCCGGA	1 cut(s)	307
KpnI	GGTACC	1 cut(s)	1965
Kzo9I	GATC	9 cut(s)	814, 1114, 1145, 1663, 1728, 1762, 1860, 1900, 1912
LguI	GCTCTTC	1 cut(s)	182
LmnI	GCTCC	8 cut(s)	74, 231, 245, 310, 591, 982, 1180, 1340
Lsp1109I	GCAGC	6 cut(s)	45, 142, 961, 982, 1433, 1920
LweI	GCATC	4 cut(s)	402, 1630, 1679, 1881
MaeI	CTAG	6 cut(s)	476, 692, 914, 1940, 2001, 2061
MaeII	ACGT	2 cut(s)	1888, 2067
MaeIII	GTNAC	6 cut(s)	19, 424, 554, 1279, 1328, 1591
MalI	GATC	9 cut(s)	816, 1116, 1147, 1665, 1730, 1764, 1862, 1902, 1914
MboI	GATC	9 cut(s)	814, 1114, 1145, 1663, 1728, 1762, 1860, 1900, 1912
MfeI	CAATTG	1 cut(s)	790
MflI	RGATCY	7 cut(s)	814, 1114, 1145, 1663, 1728, 1762, 1912
MhlI	GDGCHC	3 cut(s)	71, 584, 1015
MlyI	GAGTC	8 cut(s)	488, 951, 1391, 1748, 1902, 1990, 2111, 2141
MmeI	TCCRAC	2 cut(s)	651, 1888
MroI	TCCGGA	1 cut(s)	307
MroXI	GAANNNNTTC	1 cut(s)	1846
MseI	TTAA	4 cut(s)	1068, 1169, 1434, 2073
MslI	CAYNNNNRTG	2 cut(s)	1862, 2102
MspA1I	CMGCKG	2 cut(s)	58, 1394
MspI	CCGG	6 cut(s)	39, 92, 308, 773, 1830, 2056
MspR9I	CCNGG	4 cut(s)	774, 1119, 1655, 2057
MunI	CAATTG	1 cut(s)	790
Mva1269I	GAATGC	3 cut(s)	747, 1028, 1887
MvaI	CCWGG	2 cut(s)	1119, 1655
MvnI	CGCG	2 cut(s)	98, 1905
MwoI	GCNNNNNNNGC	5 cut(s)	92, 1025, 1301, 1421, 1427
NciI	CCSGG	2 cut(s)	774, 2057
NcoI	CCATGG	3 cut(s)	72, 563, 1227
NdeI	CATATG	1 cut(s)	1634
NdeII	GATC	9 cut(s)	814, 1114, 1145, 1663, 1728, 1762, 1860, 1900, 1912
NheI	GCTAGC	1 cut(s)	691
NlaIV	GGNNCC	7 cut(s)	43, 306, 1342, 1800, 1963, 2109, 2143
NmuCI	GTSAC	3 cut(s)	19, 424, 1591
NspI	RCATGY	1 cut(s)	1336
NspV	TTCGAA	1 cut(s)	455
PaeR7I	CTCGAG	1 cut(s)	1248
PagI	TCATGA	1 cut(s)	519
PaqCI	CACCTGC	1 cut(s)	1102
PciSI	GCTCTTC	1 cut(s)	182
PctI	GAATGC	3 cut(s)	747, 1028, 1887
PdmI	GAANNNNTTC	1 cut(s)	1846
PfeI	GAWTC	9 cut(s)	145, 331, 571, 827, 1052, 1085, 1244, 1472, 1808
PflFI	GACNNNGTC	2 cut(s)	103, 112
PflMI	CCANNNNNTGG	1 cut(s)	1922
PkrI	GCNGC	9 cut(s)	60, 97, 157, 160, 976, 997, 1423, 1935, 1945
PleI	GAGTC	8 cut(s)	487, 950, 1390, 1748, 1901, 1989, 2111, 2141
PpsI	GAGTC	8 cut(s)	487, 950, 1390, 1748, 1901, 1989, 2111, 2141
Ppu21I	YACGTR	1 cut(s)	1889
Psp124BI	GAGCTC	1 cut(s)	71
Psp6I	CCWGG	2 cut(s)	1117, 1653
PspGI	CCWGG	2 cut(s)	1117, 1653
PspN4I	GGNNCC	7 cut(s)	43, 306, 1342, 1800, 1963, 2109, 2143
PspPI	GGNCC	1 cut(s)	1925
PsuI	RGATCY	7 cut(s)	814, 1114, 1145, 1663, 1728, 1762, 1912
PsyI	GACNNNGTC	2 cut(s)	103, 112
PvuII	CAGCTG	1 cut(s)	1394
RsaI	GTAC	7 cut(s)	514, 1139, 1219, 1289, 1575, 1691, 1963
RsaNI	GTAC	7 cut(s)	513, 1138, 1218, 1288, 1574, 1690, 1962
RseI	CAYNNNNRTG	2 cut(s)	1862, 2102
SacI	GAGCTC	1 cut(s)	71
SalI	GTCGAC	1 cut(s)	106
SapI	GCTCTTC	1 cut(s)	182
SaqAI	TTAA	4 cut(s)	1068, 1169, 1434, 2073
SatI	GCNGC	9 cut(s)	59, 96, 156, 159, 975, 996, 1422, 1934, 1944
Sau3AI	GATC	9 cut(s)	814, 1114, 1145, 1663, 1728, 1762, 1860, 1900, 1912
Sau96I	GGNCC	1 cut(s)	1925
SchI	GAGTC	8 cut(s)	488, 951, 1391, 1748, 1902, 1990, 2111, 2141
ScrFI	CCNGG	4 cut(s)	774, 1119, 1655, 2057
SduI	GDGCHC	3 cut(s)	71, 584, 1015
SfaNI	GCATC	4 cut(s)	402, 1630, 1679, 1881
SfcI	CTRYAG	3 cut(s)	235, 1098, 1410
Sfr274I	CTCGAG	1 cut(s)	1248
SfuI	TTCGAA	1 cut(s)	455
SinI	GGWCC	1 cut(s)	1925
SlaI	CTCGAG	1 cut(s)	1248
SmiMI	CAYNNNNRTG	2 cut(s)	1862, 2102
SmlI	CTYRAG	1 cut(s)	1248
SmoI	CTYRAG	1 cut(s)	1248
SsiI	CCGC	6 cut(s)	56, 61, 96, 159, 770, 1944
SspI	AATATT	3 cut(s)	274, 1174, 1487
SspMI	CTAG	6 cut(s)	476, 692, 914, 1940, 2001, 2061
SstI	GAGCTC	1 cut(s)	71
StyD4I	CCNGG	4 cut(s)	772, 1117, 1653, 2055
StyI	CCWWGG	6 cut(s)	72, 528, 563, 1227, 1916, 2025
TaaI	ACNGT	5 cut(s)	517, 1164, 1279, 1292, 2136
TaiI	ACGT	2 cut(s)	1891, 2070
TaqI	TCGA	6 cut(s)	107, 396, 455, 549, 1249, 1380
TaqII	GACCGA	1 cut(s)	1565
TatI	WGTACW	1 cut(s)	1689
TauI	GCSGC	3 cut(s)	98, 161, 1946
TfiI	GAWTC	9 cut(s)	145, 331, 571, 827, 1052, 1085, 1244, 1472, 1808
Tru1I	TTAA	4 cut(s)	1068, 1169, 1434, 2073
Tru9I	TTAA	4 cut(s)	1068, 1169, 1434, 2073
TscAI	CASTG	5 cut(s)	369, 903, 1650, 2001, 2139
TseFI	GTSAC	3 cut(s)	19, 424, 1591
TseI	GCWGC	6 cut(s)	58, 155, 974, 995, 1421, 1933
Tsp45I	GTSAC	3 cut(s)	19, 424, 1591
TspGWI	ACGGA	3 cut(s)	1158, 1482, 1865
TspRI	CASTG	5 cut(s)	369, 903, 1650, 2001, 2139
Tth111I	GACNNNGTC	2 cut(s)	103, 112
Van91I	CCANNNNNTGG	1 cut(s)	1922
VpaK11BI	GGWCC	1 cut(s)	1925
XapI	RAATTY	4 cut(s)	49, 289, 1842, 2020
XceI	RCATGY	1 cut(s)	1336
XcmI	CCANNNNNNNNNTGG	2 cut(s)	1526, 2101
XhoI	CTCGAG	1 cut(s)	1248
XmiI	GTMKAC	2 cut(s)	107, 2038
XmnI	GAANNNNTTC	1 cut(s)	1846
XspI	CTAG	6 cut(s)	476, 692, 914, 1940, 2001, 2061

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.