Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000006

Orthogroup ID

OG0001503

Physical Location & Seq

Genomic Coordinates Forward (+)

57594738 .. 57599758

Gene Structure 5021 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug06G0444400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1869 bp

ATGCTGGGTATCAAATATACTGTAGATGTTCTATGCTCGCAAAAGTGCCAGACAGAACATTGGAGATCAGGTCATAAGACTGAATGCAATGATATACTAGCTGGCAGAATCAGCTCAGCTCAAAACACATCGAGTAATGGTAGATTTAAAACTCCTATGCGTAAAAATTTCAAAGGAATTGCACTTGTTCCTACTCATGGAATCATCTCTAAGCGTTTCAAGCAGCCAAAAAAGATTCTTTTCCCCTATGATGAATTTGTTGAACTTTTCCATTGGGAGAAGGCCGAATTTCCTCCTTGTGGGCTCTTAAACTGCGGGAACAGTTGCTTTGCCAACGTTGTTCTCCAGTGCCTTTCATCCACTCGACCACTTGTTGCGTACTTGTTAGAGAAGGGCCATCGGAAAGAATGCATACGGGATGAGTGGTGCTTCCTGTGTGAATTTGAAAGCCATCTTGAAAGAGCAAGTCAAAGTTCACAGGCCTTTTCTCCAACCAACATTATCTCTAGACTACCTAATATTGGTGGAAATCTTGGCTATGGGAGGCAGGAGGATGCTCATGAACTCATGAGGTTTGCCATTGATACAATGCAGTCAGTGTGTCTTGATGAGTTTGGTGGAGAGAAAAATGTTGATCCTCACTCTCAAGAAACAACCATCATTCAACATATATTTGGTGGTCAGCTACAATCTCAGGTGATTTGTTCAAAATGCAATAACATATCAAACCAATATGAGAATATGATGGATTTAACTGTTGAGATTCATGGGGATGCTTCATCATTGGAGGAATGCCTAGTCCAATACACTGGCAGGGAGTCGCTTCATGGAGAAAATATGTACAAATGTGATGGGTGCAATGACTATGTCAAGGCTTGGAAGAGACTTTCCGTTAAACGTGCTCCAAATGTTCTGACAATTGCCTTGAAGAGATTTCAGAGTGGGCGCTTTGGGAAAATTAACAAGAGAGTTACATTCCCTGCGACGCTAGATCTCAGTCCGTACATGAGTGAAGCGGGAGATGGTACAGATATTTACAGCCTTTATGGTGTTGTTGTCCATGTGGATATGTTGAATGCTTCATACTTCGGTCATTACATCTGTTATACCAAGGATTTCCTTGGAAAGTGGTACAGAATTGATGATTGCAAGGTTACAACTGTTAATTTGGAAGAGGTGCTTTCTCAGGGAGCATATATGCTTTTATATAGCAGGGTTCAGGCACGATCACCTTGTCTAAGCATCCTTGAACCTTCAAGGAAAGAGGAAGAAATGCCCAATGCCACCCTTGAAGTAGAGACTCTCCCAAATGAACCAGTTAAATGTTCTGCTATGGAGTCTGCAGATCTGGCTCCCCATTATTGGTCTGGGCCATTGGACATTAGTCTGCCCCCACAAATAACCAACTGTGTAGAAGACTCATCTGCTTTACTAGAGCATTCTGATGGTGTTACAAATGTGTCCAGTCTCATATCACCCTCATCTGCTTCAAAAGAGGTTCACATAATTGAAGAAGCTACGGTCAATTCACAGTCAAGTCCATCCACTTCAGGGGAGATTTCTGGTTGCGAGAAGGTTCTTGTCACTGCATCGGATCTGGATAAAGTAAGAAGAGTTCCAAATGGCGTGGATGTAGCTAATGACATATATCGGGCTGTGTCTGAGGAGGCATCAGAATGCTGTGAGAAGGATCGCTCTTCTGCAGATGATATGGAGTGGGAGTCGAGCACACTCGTGGCACAGGACGTTGAAGTTTGCAAAAGCAACGGAACAATTGATGCAGCGAATGAAACGGCTTCTCCAGTTGAACATCCGGGCTTAATGAATGGGAACGGATATCATAGATTAGTACAGATTGACGACGGGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0003674 GO:0003824 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005975 GO:0005976 GO:0006073 GO:0008150 GO:0008152 GO:0008417 GO:0009058 GO:0009059 GO:0009250 GO:0009832 GO:0009969 GO:0009987 GO:0010383 GO:0010410 GO:0010411 GO:0012505 GO:0016051 GO:0016740 GO:0016757 GO:0016758 GO:0033692 GO:0034637 GO:0034645 GO:0036065 GO:0042546 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044036 GO:0044042 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044424 GO:0044444 GO:0044464 GO:0070085 GO:0071554 GO:0071669 GO:0071704 GO:0071840 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

XG_FTase

Protein Analysis

622

Amino Acids

69.17

Weight (kDa)

5.21

Isoelectric Point (pI)

50.27

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
UCH	PF00443	100 - 403	1.1e-54	Ubiquitin carboxyl-terminal hydrolase
UCH_1	PF13423	101 - 385	3.1e-20	Ubiquitin carboxyl-terminal hydrolase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001503)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G03220
fragaria_vesca	FvH4_4g30950 FvH4_5g14640
malus_domestica	MD00G1081500.v1.1 MD14G1203600.v1.1 MD16G1068500.v1.1 MD16G1068600.v1.1 MD16G1068700.v1.1
prunus_persica	Prupe.1G278500_v2.0.a1 Prupe.5G196900_v2.0.a1
pyrus_communis	pycom14g16840 pycom16g05990 pycom16g06000
rosa_chinensis	RchiOBHm_Chr3g0485401 RchiOBHm_Chr3g0485411 RchiOBHm_Chr4g0439291 RchiOBHm_Chr4g0439301 RchiOBHm_Chr7g0181851
rosa_laevigata	RLG00000005169 RLG00000006282 RLG00000006284 RLG00000023152
rosa_multiflora	Rmu_co8397081.1_g000001 Rmu_sc0006598.1_g000004 Rmu_sc0006598.1_g000006 Rmu_sc0007912.1_g000001 Rmu_sc0021327.1_g000004 Rmu_ssc0000171.1_g000019
rosa_roxburghii	Rroxscaffold_3G00271700 Rroxscaffold_5G00380250
rosa_rugosa	Rorug04G0317200 Rorug04G0317200 Rorug06G0444400
rosa_samantha	Rh4AG368000 Rh4AG368100 Rh4BG379900 Rh4BG380000 Rh4CG394100 Rh4CG394200 Rh4CG394300 Rh4DG374300 Rh4DG374400 Rh7AG046700 Rh7BG046300 Rh7CG046800 Rh7DG045900
rosa_wichuraiana	Rw0G005600 Rw0G011610 Rw3G023710 Rw5G028570 Rw7G003860

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AciI	CCGC	2 cut(s)	315, 1016
AclI	AACGTT	1 cut(s)	336
AclWI	GGATC	3 cut(s)	629, 1602, 1698
AcsI	RAATTY	4 cut(s)	166, 254, 287, 440
AcuI	CTGAAG	1 cut(s)	1533
AfaI	GTAC	6 cut(s)	380, 842, 1004, 1027, 1133, 1851
AfiI	CCNNNNNNNGG	5 cut(s)	197, 299, 521, 1362, 1551
AleI	CACNNNNGTG	1 cut(s)	1733
AluBI	AGCT	6 cut(s)	101, 114, 119, 685, 1517, 1637
AluI	AGCT	6 cut(s)	101, 114, 119, 685, 1517, 1637
Alw21I	GWGCWC	2 cut(s)	904, 1730
Alw26I	GTCTC	3 cut(s)	877, 1292, 1472
AlwI	GGATC	3 cut(s)	629, 1602, 1698
AoxI	GGCC	4 cut(s)	282, 394, 480, 1370
ApeKI	GCWGC	2 cut(s)	223, 1781
ApoI	RAATTY	4 cut(s)	166, 254, 287, 440
AspLEI	GCGC	1 cut(s)	948
AspS9I	GGNCC	2 cut(s)	394, 1370
AsuC2I	CCSGG	1 cut(s)	1815
AsuHPI	GGTGA	3 cut(s)	709, 1221, 1467
BanII	GRGCYC	1 cut(s)	306
BauI	CACGAG	1 cut(s)	1733
BbsI	GAAGAC	1 cut(s)	1422
Bbv12I	GWGCWC	2 cut(s)	904, 1730
BbvI	GCAGC	2 cut(s)	235, 1793
BccI	CCATC	8 cut(s)	405, 459, 665, 739, 845, 1016, 1439, 1549
BceAI	ACGGC	1 cut(s)	1809
BcnI	CCSGG	1 cut(s)	1815
BcoDI	GTCTC	3 cut(s)	877, 1292, 1472
BfaI	CTAG	5 cut(s)	98, 507, 797, 989, 1433
BfmI	CTRYAG	3 cut(s)	21, 1341, 1701
BfoI	RGCGCY	1 cut(s)	949
BglII	AGATCT	2 cut(s)	991, 1345
BisI	GCNGC	2 cut(s)	224, 1782
BlpI	GCTNAGC	1 cut(s)	115
BlsI	GCNGC	2 cut(s)	225, 1783
Bme1390I	CCNGG	1 cut(s)	1815
BmgT120I	GGNCC	2 cut(s)	394, 1370
BmiI	GGNNCC	1 cut(s)	1353
BmrFI	CCNGG	1 cut(s)	1815
BmsI	GCATC	6 cut(s)	544, 763, 1251, 1598, 1679, 1768
BoxI	GACNNNNGTC	1 cut(s)	1383
BpiI	GAAGAC	1 cut(s)	1422
BpmI	CTGGAG	2 cut(s)	329, 1785
Bpu1102I	GCTNAGC	1 cut(s)	115
BpuEI	CTTGAG	1 cut(s)	630
BpuMI	CCSGG	1 cut(s)	1815
BsaJI	CCNNGG	2 cut(s)	1110, 1120
BsaXI	ACNNNNNCTCC	6 cut(s)	55, 85, 1706, 1736, 1783, 1813
Bsc4I	CCNNNNNNNGG	5 cut(s)	197, 299, 521, 1362, 1551
Bse1I	ACTGG	5 cut(s)	346, 814, 1316, 1464, 1802
Bse3DI	GCAATG	2 cut(s)	94, 865
BseDI	CCNNGG	2 cut(s)	1110, 1120
BseGI	GGATG	8 cut(s)	356, 424, 559, 778, 1242, 1541, 1636, 1810
BseLI	CCNNNNNNNGG	5 cut(s)	197, 299, 521, 1362, 1551
BseMI	GCAATG	2 cut(s)	94, 865
BseMII	CTCAG	5 cut(s)	129, 707, 1009, 1199, 1653
BseNI	ACTGG	5 cut(s)	346, 814, 1316, 1464, 1802
BseRI	GAGGAG	1 cut(s)	1679
BseXI	GCAGC	2 cut(s)	235, 1793
BseYI	CCCAGC	1 cut(s)	4
BshFI	GGCC	4 cut(s)	284, 396, 482, 1372
BsiHKAI	GWGCWC	2 cut(s)	904, 1730
BsiSI	CCGG	1 cut(s)	1814
BslI	CCNNNNNNNGG	5 cut(s)	197, 299, 521, 1362, 1551
BsmAI	GTCTC	3 cut(s)	877, 1292, 1472
BsmI	GAATGC	6 cut(s)	89, 413, 797, 1081, 1438, 1682
BsnI	GGCC	4 cut(s)	284, 396, 482, 1372
Bsp1286I	GDGCHC	3 cut(s)	306, 904, 1730
Bsp1407I	TGTACA	1 cut(s)	840
Bsp143I	GATC	7 cut(s)	65, 634, 991, 1226, 1345, 1594, 1690
Bsp1720I	GCTNAGC	1 cut(s)	115
BspACI	CCGC	2 cut(s)	315, 1016
BspANI	GGCC	4 cut(s)	284, 396, 482, 1372
BspCNI	CTCAG	5 cut(s)	128, 706, 1008, 1198, 1654
BspHI	TCATGA	2 cut(s)	559, 567
BspLI	GGNNCC	1 cut(s)	1353
BspMAI	CTGCAG	2 cut(s)	1345, 1705
BspPI	GGATC	3 cut(s)	629, 1602, 1698
BspQI	GCTCTTC	1 cut(s)	1702
BsrDI	GCAATG	2 cut(s)	94, 865
BsrGI	TGTACA	1 cut(s)	840
BsrI	ACTGG	5 cut(s)	346, 814, 1316, 1464, 1802
BssECI	CCNNGG	2 cut(s)	1110, 1120
BssMI	GATC	7 cut(s)	65, 634, 991, 1226, 1345, 1594, 1690
BssSI	CACGAG	1 cut(s)	1733
BssT1I	CCWWGG	2 cut(s)	1110, 1120
Bst2BI	CACGAG	1 cut(s)	1733
Bst4CI	ACNGT	7 cut(s)	22, 323, 757, 1162, 1409, 1522, 1533
Bst6I	CTCTTC	5 cut(s)	875, 923, 1167, 1606, 1702
BstAUI	TGTACA	1 cut(s)	840
BstC8I	GCNNGC	2 cut(s)	38, 103
BstDEI	CTNAG	7 cut(s)	115, 210, 693, 995, 1185, 1238, 1662
BstF5I	GGATG	8 cut(s)	356, 424, 559, 778, 1242, 1541, 1636, 1810
BstH2I	RGCGCY	1 cut(s)	949
BstHHI	GCGC	1 cut(s)	948
BstKTI	GATC	7 cut(s)	68, 637, 994, 1229, 1348, 1597, 1693
BstMAI	GTCTC	3 cut(s)	877, 1292, 1472
BstMBI	GATC	7 cut(s)	65, 634, 991, 1226, 1345, 1594, 1690
BstMWI	GCNNNNNNNGC	3 cut(s)	111, 220, 1349
BstPAI	GACNNNNGTC	1 cut(s)	1383
BstSCI	CCNGG	1 cut(s)	1813
BstSFI	CTRYAG	3 cut(s)	21, 1341, 1701
BstV1I	GCAGC	2 cut(s)	235, 1793
BstV2I	GAAGAC	1 cut(s)	1422
BstX2I	RGATCY	3 cut(s)	991, 1345, 1594
BstXI	CCANNNNNNTGG	1 cut(s)	809
BstYI	RGATCY	3 cut(s)	991, 1345, 1594
BsuRI	GGCC	4 cut(s)	284, 396, 482, 1372
BtsCI	GGATG	8 cut(s)	356, 424, 559, 778, 1242, 1541, 1636, 1810
BtsI	GCAGTG	1 cut(s)	1584
BtsIMutI	CAGTG	4 cut(s)	353, 603, 807, 1584
Cac8I	GCNNGC	2 cut(s)	38, 103
CciI	TCATGA	2 cut(s)	559, 567
CfoI	GCGC	1 cut(s)	948
Cfr13I	GGNCC	2 cut(s)	394, 1370
CseI	GACGC	1 cut(s)	994
Csp6I	GTAC	6 cut(s)	379, 841, 1003, 1026, 1132, 1850
CspCI	CAANNNNNGTGG	2 cut(s)	1608, 1643
CviAII	CATG	7 cut(s)	197, 560, 568, 767, 827, 1006, 1061
CviQI	GTAC	6 cut(s)	379, 841, 1003, 1026, 1132, 1850
DdeI	CTNAG	7 cut(s)	115, 210, 693, 995, 1185, 1238, 1662
DpnI	GATC	7 cut(s)	67, 636, 993, 1228, 1347, 1596, 1692
DpnII	GATC	7 cut(s)	65, 634, 991, 1226, 1345, 1594, 1690
DraI	TTTAAA	1 cut(s)	148
Eam1104I	CTCTTC	5 cut(s)	875, 923, 1167, 1606, 1702
EarI	CTCTTC	5 cut(s)	875, 923, 1167, 1606, 1702
Eco130I	CCWWGG	2 cut(s)	1110, 1120
Eco147I	AGGCCT	1 cut(s)	482
Eco24I	GRGCYC	1 cut(s)	306
Eco32I	GATATC	1 cut(s)	1838
Eco57I	CTGAAG	1 cut(s)	1533
EcoRV	GATATC	1 cut(s)	1838
EcoT14I	CCWWGG	2 cut(s)	1110, 1120
EcoT22I	ATGCAT	1 cut(s)	413
EcoT38I	GRGCYC	1 cut(s)	306
ErhI	CCWWGG	2 cut(s)	1110, 1120
FaeI	CATG	7 cut(s)	200, 563, 571, 770, 830, 1009, 1064
FalI	AAGNNNNNCTT	2 cut(s)	1164, 1196
FatI	CATG	7 cut(s)	196, 559, 567, 766, 826, 1005, 1060
FauI	CCCGC	2 cut(s)	308, 1009
Fnu4HI	GCNGC	2 cut(s)	224, 1782
FokI	GGATG	8 cut(s)	343, 431, 566, 785, 1229, 1528, 1643, 1797
FriOI	GRGCYC	1 cut(s)	306
Fsp4HI	GCNGC	2 cut(s)	224, 1782
FspBI	CTAG	5 cut(s)	98, 507, 797, 989, 1433
GlaI	GCGC	1 cut(s)	947
GluI	GCNGC	2 cut(s)	224, 1782
GsaI	CCCAGC	1 cut(s)	8
GsuI	CTGGAG	2 cut(s)	329, 1785
HaeII	RGCGCY	1 cut(s)	949
HaeIII	GGCC	4 cut(s)	284, 396, 482, 1372
HapII	CCGG	1 cut(s)	1814
HgaI	GACGC	1 cut(s)	994
HhaI	GCGC	1 cut(s)	948
Hin1II	CATG	7 cut(s)	200, 563, 571, 770, 830, 1009, 1064
Hin6I	GCGC	1 cut(s)	946
HinP1I	GCGC	1 cut(s)	946
HinfI	GANTC	9 cut(s)	108, 201, 235, 763, 818, 1300, 1337, 1418, 1721
HpaII	CCGG	1 cut(s)	1814
HphI	GGTGA	3 cut(s)	709, 1221, 1467
Hpy166II	GTNNAC	2 cut(s)	476, 1501
Hpy188I	TCNGA	7 cut(s)	402, 915, 939, 1444, 1594, 1663, 1675
Hpy188III	TCNNGA	7 cut(s)	455, 507, 560, 568, 605, 647, 1598
Hpy8I	GTNNAC	2 cut(s)	476, 1501
Hpy99I	CGWCG	2 cut(s)	988, 1865
HpyAV	CCTTC	5 cut(s)	274, 385, 1263, 1567, 1681
HpyCH4III	ACNGT	7 cut(s)	22, 323, 757, 1162, 1409, 1522, 1533
HpyCH4IV	ACGT	3 cut(s)	336, 898, 1746
HpyF10VI	GCNNNNNNNGC	3 cut(s)	111, 220, 1349
HpyF3I	CTNAG	7 cut(s)	115, 210, 693, 995, 1185, 1238, 1662
HpySE526I	ACGT	3 cut(s)	336, 898, 1746
Hsp92II	CATG	7 cut(s)	200, 563, 571, 770, 830, 1009, 1064
HspAI	GCGC	1 cut(s)	946
Kzo9I	GATC	7 cut(s)	65, 634, 991, 1226, 1345, 1594, 1690
LguI	GCTCTTC	1 cut(s)	1702
LmnI	GCTCC	3 cut(s)	907, 1190, 1357
Lsp1109I	GCAGC	2 cut(s)	235, 1793
LweI	GCATC	6 cut(s)	544, 763, 1251, 1598, 1679, 1768
MaeI	CTAG	5 cut(s)	98, 507, 797, 989, 1433
MaeII	ACGT	3 cut(s)	336, 898, 1746
MaeIII	GTNAC	4 cut(s)	970, 1153, 1450, 1582
MalI	GATC	7 cut(s)	67, 636, 993, 1228, 1347, 1596, 1692
MboI	GATC	7 cut(s)	65, 634, 991, 1226, 1345, 1594, 1690
MboII	GAAGA	8 cut(s)	892, 940, 1184, 1280, 1427, 1523, 1623, 1689
MfeI	CAATTG	2 cut(s)	918, 1773
MflI	RGATCY	3 cut(s)	991, 1345, 1594
MhlI	GDGCHC	3 cut(s)	306, 904, 1730
MlyI	GAGTC	5 cut(s)	827, 1294, 1346, 1412, 1730
MmeI	TCCRAC	1 cut(s)	515
Mph1103I	ATGCAT	1 cut(s)	413
MseI	TTAA	8 cut(s)	147, 308, 752, 894, 960, 1164, 1320, 1820
MslI	CAYNNNNRTG	4 cut(s)	771, 1443, 1675, 1733
MspI	CCGG	1 cut(s)	1814
MspR9I	CCNGG	1 cut(s)	1815
MunI	CAATTG	2 cut(s)	918, 1773
Mva1269I	GAATGC	6 cut(s)	89, 413, 797, 1081, 1438, 1682
MwoI	GCNNNNNNNGC	3 cut(s)	111, 220, 1349
NciI	CCSGG	1 cut(s)	1815
NdeII	GATC	7 cut(s)	65, 634, 991, 1226, 1345, 1594, 1690
NlaIII	CATG	7 cut(s)	200, 563, 571, 770, 830, 1009, 1064
NlaIV	GGNNCC	1 cut(s)	1353
NmuCI	GTSAC	1 cut(s)	1582
NsiI	ATGCAT	1 cut(s)	413
OliI	CACNNNNGTG	1 cut(s)	1733
PagI	TCATGA	2 cut(s)	559, 567
PceI	AGGCCT	1 cut(s)	482
PciSI	GCTCTTC	1 cut(s)	1702
PctI	GAATGC	6 cut(s)	89, 413, 797, 1081, 1438, 1682
PfeI	GAWTC	4 cut(s)	108, 201, 235, 763
PflFI	GACNNNGTC	1 cut(s)	866
PkrI	GCNGC	2 cut(s)	225, 1783
PleI	GAGTC	5 cut(s)	826, 1294, 1345, 1412, 1729
PpsI	GAGTC	5 cut(s)	826, 1294, 1345, 1412, 1729
PshAI	GACNNNNGTC	1 cut(s)	1383
Psp1406I	AACGTT	1 cut(s)	336
PspFI	CCCAGC	1 cut(s)	4
PspN4I	GGNNCC	1 cut(s)	1353
PspPI	GGNCC	2 cut(s)	394, 1370
PsrI	GAACNNNNNNTAC	2 cut(s)	1599, 1631
PstI	CTGCAG	2 cut(s)	1345, 1705
PsuI	RGATCY	3 cut(s)	991, 1345, 1594
PsyI	GACNNNGTC	1 cut(s)	866
RsaI	GTAC	6 cut(s)	380, 842, 1004, 1027, 1133, 1851
RsaNI	GTAC	6 cut(s)	379, 841, 1003, 1026, 1132, 1850
RseI	CAYNNNNRTG	4 cut(s)	771, 1443, 1675, 1733
SapI	GCTCTTC	1 cut(s)	1702
SaqAI	TTAA	8 cut(s)	147, 308, 752, 894, 960, 1164, 1320, 1820
SatI	GCNGC	2 cut(s)	224, 1782
Sau3AI	GATC	7 cut(s)	65, 634, 991, 1226, 1345, 1594, 1690
Sau96I	GGNCC	2 cut(s)	394, 1370
SchI	GAGTC	5 cut(s)	827, 1294, 1346, 1412, 1730
ScrFI	CCNGG	1 cut(s)	1815
SduI	GDGCHC	3 cut(s)	306, 904, 1730
SfaNI	GCATC	6 cut(s)	544, 763, 1251, 1598, 1679, 1768
SfcI	CTRYAG	3 cut(s)	21, 1341, 1701
SmiMI	CAYNNNNRTG	4 cut(s)	771, 1443, 1675, 1733
SmlI	CTYRAG	1 cut(s)	645
SmoI	CTYRAG	1 cut(s)	645
SseBI	AGGCCT	1 cut(s)	482
SsiI	CCGC	2 cut(s)	315, 1016
SspI	AATATT	1 cut(s)	520
SspMI	CTAG	5 cut(s)	98, 507, 797, 989, 1433
StuI	AGGCCT	1 cut(s)	482
StyD4I	CCNGG	1 cut(s)	1813
StyI	CCWWGG	2 cut(s)	1110, 1120
TaaI	ACNGT	7 cut(s)	22, 323, 757, 1162, 1409, 1522, 1533
TaiI	ACGT	3 cut(s)	339, 901, 1749
TaqI	TCGA	3 cut(s)	131, 364, 1724
TaqII	GACCGA	1 cut(s)	1079
TatI	WGTACW	2 cut(s)	840, 1849
TfiI	GAWTC	4 cut(s)	108, 201, 235, 763
Tru1I	TTAA	8 cut(s)	147, 308, 752, 894, 960, 1164, 1320, 1820
Tru9I	TTAA	8 cut(s)	147, 308, 752, 894, 960, 1164, 1320, 1820
TscAI	CASTG	4 cut(s)	353, 603, 814, 1591
TseFI	GTSAC	1 cut(s)	1582
TseI	GCWGC	2 cut(s)	223, 1781
Tsp45I	GTSAC	1 cut(s)	1582
TspGWI	ACGGA	4 cut(s)	880, 990, 1782, 1848
TspRI	CASTG	4 cut(s)	353, 603, 814, 1591
Tth111I	GACNNNGTC	1 cut(s)	866
XapI	RAATTY	4 cut(s)	166, 254, 287, 440
XbaI	TCTAGA	1 cut(s)	506
XcmI	CCANNNNNNNNNTGG	1 cut(s)	1364
XspI	CTAG	5 cut(s)	98, 507, 797, 989, 1433
Zsp2I	ATGCAT	1 cut(s)	413

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.