Rmu_sc0007912.1_g000001

Galactoside 2-alpha-L-fucosyltransferase-like

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0007912.1
Physical Location & Seq
Forward (+)
1 .. 1647
1647 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0007912.1_g000001.1.cds

Sequence Viewer

Length: 1463 bp
gttcagaagatcaatttttggatcctgtagaggtaccaaaggataagttgcttggcggccttcttgctgctggatttgatgaaggatcttgtgtcagcaggtaccagtcagcttcatatcgtaaagaaatgccacatgaaccttcttcttaccttttatccaggttaagaagttatgaagctctgcataagcgttgcggacctaatactgaatcctataaaaaagccgtggaacaactcaagtctggccgtcatccgacttccttggattgtaactatgtggtatggatttcttatagtggattagggaatagaatactgacactagcttcagcatttctttatgctctcctgacaaaccgggtactactagtggatcctggagtggacatggttgatctattctgcgaaccatttccggaagcctcatggttcctccccatggatttcccccttaaaaatcagtttggcagcttgaatcagaaatctgcacattgttatggggaaatggtgaggaagagcaacctcacaaataccgaccagtcactgctgtcatcttttgtgtatctccatctgtcccatgattataatgatcaagataagcttttcttctgcaaccaagatcaagattttctcaaaaagataccatggttgatcgtgaggacggataactattttgtcccatctcttttcttgatcccatcttttgagcaagaactcggcaatctctttccaaggaaagaaacagttttccatttcttgggtcggtacctgttccatcccacaaatgtggtctggggacttattactagatactatcaggcatatttagctaaagcagatgaaagaataggcatccagatcagagtctttgataccgggactggtccatttcaacatgtgtttgatcagatcctatcctgtgcattgaaggagaatctattgccagagaccaatgggcaggatctcatagtcactccatcgggaactttgaagtccaaagctgtgctaattacttctttaagctccggatacttagagaagctaagggacatgtattgggagcatcctactgtgacaggagaggtgattggcatttatcagccgagtcatgaggagtatcaacaaactgagaagcatgcgcacaaccgaaaggcatgggctgaaatgtatttgctaagcttgacggatgtgttgatcacaagctcatggtcgacttttggttatgtggcgcagagtctaggcgggctgacaccatggatactctacaaaccggagaatacgacggcccctgatcctgcttgtaagcaagcaatgtcaatggagccttgttttcacgcacctcccttttatgattgcaaggccaaaacaggagttgacacaggtgcactagttcctcatgtgaggcattgtgaggatatgagttggggtcttaaattgattgatcgatccgatgagttttag

Protein Analysis

486

Amino Acids

55.37

Weight (kDa)

5.82

Isoelectric Point (pI)

33.21

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 587
Acc16I TGCGCA 1 cut(s) 1142
Acc36I ACCTGC 1 cut(s) 89
Acc65I GGTACC 3 cut(s) 33, 101, 767
AccB1I GGYRCC 3 cut(s) 33, 101, 767
AccB7I CCANNNNNTGG 1 cut(s) 759
AccI GTMKAC 1 cut(s) 1213
AccIII TCCGGA 2 cut(s) 417, 1027
AciI CCGC 3 cut(s) 56, 197, 1244
AcoI YGGCCR 1 cut(s) 246
AcuI CTGAAG 1 cut(s) 314
AfaI GTAC 4 cut(s) 35, 103, 365, 769
AfiI CCNNNNNNNGG 2 cut(s) 441, 759
AflIII ACRYGT 2 cut(s) 897, 1052
AgsI TTSAA 4 cut(s) 477, 895, 930, 993
AhlI ACTAGT 2 cut(s) 369, 1389
AjnI CCWGG 2 cut(s) 160, 378
AleI CACNNNNGTG 1 cut(s) 787
Alw21I GWGCWC 1 cut(s) 1389
Alw26I GTCTC 1 cut(s) 943
Alw44I GTGCAC 1 cut(s) 1385
AlwNI CAGNNNCTG 1 cut(s) 546
Aor13HI TCCGGA 2 cut(s) 417, 1027
AoxI GGCC 4 cut(s) 57, 246, 1286, 1361
ApaLI GTGCAC 1 cut(s) 1385
ApeKI GCWGC 2 cut(s) 67, 470
Asp700I GAANNNNTTC 1 cut(s) 413
Asp718I GGTACC 3 cut(s) 33, 101, 767
AspLEI GCGC 2 cut(s) 1143, 1233
AspS9I GGNCC 3 cut(s) 199, 886, 1287
AsuC2I CCSGG 2 cut(s) 361, 879
AsuHPI GGTGA 2 cut(s) 522, 1098
AvaII GGWCC 2 cut(s) 199, 886
BaeGI GKGCMC 1 cut(s) 1389
BaeI ACNNNNGTAYC 2 cut(s) 634, 667
BamHI GGATCC 2 cut(s) 21, 375
BanI GGYRCC 3 cut(s) 33, 101, 767
Bbv12I GWGCWC 1 cut(s) 1389
BbvI GCAGC 2 cut(s) 54, 482
BccI CCATC 5 cut(s) 578, 690, 708, 785, 987
BceAI ACGGC 3 cut(s) 211, 233, 1301
BciT130I CCWGG 2 cut(s) 162, 380
BciVI GTATCC 2 cut(s) 1024, 1253
BclI TGATCA 3 cut(s) 591, 906, 1196
BcnI CCSGG 2 cut(s) 361, 879
BcoDI GTCTC 1 cut(s) 943
BcuI ACTAGT 2 cut(s) 369, 1389
BfaI CTAG 5 cut(s) 325, 370, 809, 1240, 1390
BfmI CTRYAG 1 cut(s) 26
BfuAI ACCTGC 1 cut(s) 89
BfuI GTATCC 2 cut(s) 1024, 1253
BisI GCNGC 3 cut(s) 57, 68, 471
BlpI GCTNAGC 1 cut(s) 1177
BlsI GCNGC 3 cut(s) 58, 69, 472
Bme1390I CCNGG 4 cut(s) 162, 361, 380, 879
Bme18I GGWCC 2 cut(s) 199, 886
BmgT120I GGNCC 3 cut(s) 199, 886, 1287
BmiI GGNNCC 8 cut(s) 23, 35, 103, 377, 433, 769, 1289, 1325
BmrFI CCNGG 4 cut(s) 162, 361, 380, 879
BmsI GCATC 2 cut(s) 863, 1074
BpmI CTGGAG 1 cut(s) 401
Bpu10I CCTNAGC 1 cut(s) 1045
Bpu1102I GCTNAGC 1 cut(s) 1177
BpuEI CTTGAG 1 cut(s) 223
BpuMI CCSGG 2 cut(s) 361, 879
Bsa29I ATCGAT 1 cut(s) 1446
BsaI GGTCTC 1 cut(s) 943
BsaJI CCNNGG 6 cut(s) 227, 263, 440, 646, 733, 1255
BsaWI WCCGGW 3 cut(s) 417, 1027, 1272
Bsc4I CCNNNNNNNGG 2 cut(s) 441, 759
Bse1I ACTGG 3 cut(s) 105, 540, 888
Bse3DI GCAATG 1 cut(s) 1319
BseAI TCCGGA 2 cut(s) 417, 1027
BseBI CCWGG 2 cut(s) 162, 380
BseCI ATCGAT 1 cut(s) 1446
BseDI CCNNGG 6 cut(s) 227, 263, 440, 646, 733, 1255
BseGI GGATG 5 cut(s) 252, 777, 854, 1065, 1194
BseLI CCNNNNNNNGG 2 cut(s) 441, 759
BseMI GCAATG 1 cut(s) 1319
BseMII CTCAG 1 cut(s) 1121
BseNI ACTGG 3 cut(s) 105, 540, 888
BseRI GAGGAG 1 cut(s) 1129
BseSI GKGCMC 1 cut(s) 1389
BseXI GCAGC 2 cut(s) 54, 482
BsgI GTGCAG 1 cut(s) 473
BshFI GGCC 4 cut(s) 59, 248, 1288, 1363
BshNI GGYRCC 3 cut(s) 33, 101, 767
BshVI ATCGAT 1 cut(s) 1446
BsiHKAI GWGCWC 1 cut(s) 1389
BsiSI CCGG 5 cut(s) 360, 418, 878, 1028, 1273
BslFI GGGAC 5 cut(s) 561, 664, 812, 894, 1063
BslI CCNNNNNNNGG 2 cut(s) 441, 759
BsmAI GTCTC 1 cut(s) 943
BsmFI GGGAC 5 cut(s) 561, 664, 812, 894, 1063
BsnI GGCC 4 cut(s) 59, 248, 1288, 1363
Bso31I GGTCTC 1 cut(s) 943
Bsp1286I GDGCHC 1 cut(s) 1389
Bsp13I TCCGGA 2 cut(s) 417, 1027
Bsp1720I GCTNAGC 1 cut(s) 1177
Bsp19I CCATGG 3 cut(s) 440, 646, 1255
BspACI CCGC 3 cut(s) 56, 197, 1244
BspANI GGCC 4 cut(s) 59, 248, 1288, 1363
BspCNI CTCAG 1 cut(s) 1122
BspDI ATCGAT 1 cut(s) 1446
BspEI TCCGGA 2 cut(s) 417, 1027
BspHI TCATGA 1 cut(s) 1110
BspLI GGNNCC 8 cut(s) 23, 35, 103, 377, 433, 769, 1289, 1325
BspMI ACCTGC 1 cut(s) 89
BspQI GCTCTTC 1 cut(s) 511
BspT107I GGYRCC 3 cut(s) 33, 101, 767
BspTNI GGTCTC 1 cut(s) 943
BsrDI GCAATG 1 cut(s) 1319
BsrI ACTGG 3 cut(s) 105, 540, 888
BssECI CCNNGG 6 cut(s) 227, 263, 440, 646, 733, 1255
BssT1I CCWWGG 5 cut(s) 263, 440, 646, 733, 1255
Bst2UI CCWGG 2 cut(s) 162, 380
Bst4CI ACNGT 2 cut(s) 747, 1074
Bst6I CTCTTC 1 cut(s) 511
BstC8I GCNNGC 3 cut(s) 1139, 1246, 1310
BstDEI CTNAG 4 cut(s) 1035, 1045, 1130, 1177
BstDSI CCRYGG 4 cut(s) 227, 440, 646, 1255
BstF5I GGATG 5 cut(s) 252, 777, 854, 1065, 1194
BstHHI GCGC 2 cut(s) 1143, 1233
BstMAI GTCTC 1 cut(s) 943
BstMWI GCNNNNNNNGC 1 cut(s) 829
BstNI CCWGG 2 cut(s) 162, 380
BstNSI RCATGY 3 cut(s) 901, 1056, 1141
BstSCI CCNGG 4 cut(s) 160, 359, 378, 877
BstSFI CTRYAG 1 cut(s) 26
BstSLI GKGCMC 1 cut(s) 1389
BstV1I GCAGC 2 cut(s) 54, 482
BstX2I RGATCY 5 cut(s) 21, 85, 375, 911, 963
BstXI CCANNNNNNTGG 1 cut(s) 789
BstYI RGATCY 5 cut(s) 21, 85, 375, 911, 963
Bsu15I ATCGAT 1 cut(s) 1446
BsuI GTATCC 2 cut(s) 1024, 1253
BsuRI GGCC 4 cut(s) 59, 248, 1288, 1363
BsuTUI ATCGAT 1 cut(s) 1446
BtgI CCRYGG 4 cut(s) 227, 440, 646, 1255
BtsCI GGATG 5 cut(s) 252, 777, 854, 1065, 1194
BtsI GCAGTG 1 cut(s) 544
BtsIMutI CAGTG 1 cut(s) 544
BveI ACCTGC 1 cut(s) 89
Cac8I GCNNGC 3 cut(s) 1139, 1246, 1310
CaiI CAGNNNCTG 1 cut(s) 546
CciI TCATGA 1 cut(s) 1110
CfoI GCGC 2 cut(s) 1143, 1233
Cfr13I GGNCC 3 cut(s) 199, 886, 1287
ClaI ATCGAT 1 cut(s) 1446
Csp6I GTAC 4 cut(s) 34, 102, 364, 768
CviQI GTAC 4 cut(s) 34, 102, 364, 768
DdeI CTNAG 4 cut(s) 1035, 1045, 1130, 1177
EaeI YGGCCR 1 cut(s) 246
Eam1104I CTCTTC 1 cut(s) 511
EarI CTCTTC 1 cut(s) 511
Eco130I CCWWGG 5 cut(s) 263, 440, 646, 733, 1255
Eco31I GGTCTC 1 cut(s) 943
Eco47I GGWCC 2 cut(s) 199, 886
Eco57I CTGAAG 1 cut(s) 314
EcoRII CCWGG 2 cut(s) 160, 378
EcoT14I CCWWGG 5 cut(s) 263, 440, 646, 733, 1255
ErhI CCWWGG 5 cut(s) 263, 440, 646, 733, 1255
FalI AAGNNNNNCTT 4 cut(s) 587, 619, 592, 624
FaqI GGGAC 5 cut(s) 561, 664, 812, 894, 1063
FauI CCCGC 1 cut(s) 1237
FbaI TGATCA 3 cut(s) 591, 906, 1196
FblI GTMKAC 1 cut(s) 1213
Fnu4HI GCNGC 3 cut(s) 57, 68, 471
FokI GGATG 5 cut(s) 239, 764, 841, 1052, 1201
Fsp4HI GCNGC 3 cut(s) 57, 68, 471
FspAI RTGCGCAY 1 cut(s) 1142
FspBI CTAG 5 cut(s) 325, 370, 809, 1240, 1390
FspI TGCGCA 1 cut(s) 1142
GlaI GCGC 2 cut(s) 1142, 1232
GluI GCNGC 3 cut(s) 57, 68, 471
GsuI CTGGAG 1 cut(s) 401
HaeIII GGCC 4 cut(s) 59, 248, 1288, 1363
HapII CCGG 5 cut(s) 360, 418, 878, 1028, 1273
HhaI GCGC 2 cut(s) 1143, 1233
Hin6I GCGC 2 cut(s) 1141, 1231
HinP1I GCGC 2 cut(s) 1141, 1231
HincII GTYRAC 2 cut(s) 1214, 1377
HindII GTYRAC 2 cut(s) 1214, 1377
HindIII AAGCTT 2 cut(s) 601, 1179
HinfI GANTC 6 cut(s) 211, 477, 866, 936, 1107, 1236
HpaII CCGG 5 cut(s) 360, 418, 878, 1028, 1273
HphI GGTGA 2 cut(s) 522, 1098
Hpy166II GTNNAC 4 cut(s) 387, 1214, 1377, 1387
Hpy188I TCNGA 6 cut(s) 6, 257, 482, 865, 911, 1452
Hpy8I GTNNAC 4 cut(s) 387, 1214, 1377, 1387
Hpy99I CGWCG 1 cut(s) 1287
HpyAV CCTTC 4 cut(s) 70, 76, 152, 924
HpyCH4III ACNGT 2 cut(s) 747, 1074
HpyCH4V TGCA 6 cut(s) 186, 490, 614, 925, 1358, 1387
HpyF10VI GCNNNNNNNGC 1 cut(s) 829
HpyF3I CTNAG 4 cut(s) 1035, 1045, 1130, 1177
HspAI GCGC 2 cut(s) 1141, 1231
Kpn2I TCCGGA 2 cut(s) 417, 1027
KpnI GGTACC 3 cut(s) 37, 105, 771
Ksp22I TGATCA 3 cut(s) 591, 906, 1196
LguI GCTCTTC 1 cut(s) 511
LmnI GCTCC 3 cut(s) 1030, 1062, 1323
Lsp1109I GCAGC 2 cut(s) 54, 482
LweI GCATC 2 cut(s) 863, 1074
MaeI CTAG 5 cut(s) 325, 370, 809, 1240, 1390
MaeIII GTNAC 4 cut(s) 271, 542, 972, 1074
MboII GAAGA 4 cut(s) 19, 137, 528, 600
MflI RGATCY 5 cut(s) 21, 85, 375, 911, 963
MhlI GDGCHC 1 cut(s) 1389
MluCI AATT 3 cut(s) 13, 1010, 1435
MlyI GAGTC 3 cut(s) 875, 1116, 1245
MmeI TCCRAC 1 cut(s) 280
MroI TCCGGA 2 cut(s) 417, 1027
MroXI GAANNNNTTC 1 cut(s) 413
MseI TTAA 4 cut(s) 166, 455, 1021, 1433
MslI CAYNNNNRTG 2 cut(s) 497, 787
MspI CCGG 5 cut(s) 360, 418, 878, 1028, 1273
MspR9I CCNGG 4 cut(s) 162, 361, 380, 879
MvaI CCWGG 2 cut(s) 162, 380
MwoI GCNNNNNNNGC 1 cut(s) 829
NciI CCSGG 2 cut(s) 361, 879
NcoI CCATGG 3 cut(s) 440, 646, 1255
NlaIV GGNNCC 8 cut(s) 23, 35, 103, 377, 433, 769, 1289, 1325
NmeAIII GCCGAG 2 cut(s) 698, 1130
NmuCI GTSAC 3 cut(s) 542, 972, 1074
NsbI TGCGCA 1 cut(s) 1142
NspI RCATGY 3 cut(s) 901, 1056, 1141
OliI CACNNNNGTG 1 cut(s) 787
PaeI GCATGC 1 cut(s) 1141
PagI TCATGA 1 cut(s) 1110
PciI ACATGT 2 cut(s) 897, 1052
PciSI GCTCTTC 1 cut(s) 511
PdmI GAANNNNTTC 1 cut(s) 413
PfeI GAWTC 3 cut(s) 211, 477, 936
PflMI CCANNNNNTGG 1 cut(s) 759
PfoI TCCNGGA 1 cut(s) 378
PkrI GCNGC 3 cut(s) 58, 69, 472
PleI GAGTC 3 cut(s) 874, 1115, 1244
PpsI GAGTC 3 cut(s) 874, 1115, 1244
PscI ACATGT 2 cut(s) 897, 1052
PsiI TTATAA 1 cut(s) 587
Psp6I CCWGG 2 cut(s) 160, 378
PspGI CCWGG 2 cut(s) 160, 378
PspN4I GGNNCC 8 cut(s) 23, 35, 103, 377, 433, 769, 1289, 1325
PspPI GGNCC 3 cut(s) 199, 886, 1287
PstNI CAGNNNCTG 1 cut(s) 546
PsuI RGATCY 5 cut(s) 21, 85, 375, 911, 963
RsaI GTAC 4 cut(s) 35, 103, 365, 769
RsaNI GTAC 4 cut(s) 34, 102, 364, 768
RseI CAYNNNNRTG 2 cut(s) 497, 787
SalI GTCGAC 1 cut(s) 1212
SapI GCTCTTC 1 cut(s) 511
SaqAI TTAA 4 cut(s) 166, 455, 1021, 1433
SatI GCNGC 3 cut(s) 57, 68, 471
Sau96I GGNCC 3 cut(s) 199, 886, 1287
SchI GAGTC 3 cut(s) 875, 1116, 1245
ScrFI CCNGG 4 cut(s) 162, 361, 380, 879
SduI GDGCHC 1 cut(s) 1389
SfaNI GCATC 2 cut(s) 863, 1074
SfcI CTRYAG 1 cut(s) 26
SinI GGWCC 2 cut(s) 199, 886
SmiMI CAYNNNNRTG 2 cut(s) 497, 787
SmlI CTYRAG 1 cut(s) 238
SmoI CTYRAG 1 cut(s) 238
SpeI ACTAGT 2 cut(s) 369, 1389
SphI GCATGC 1 cut(s) 1141
Sse9I AATT 3 cut(s) 13, 1010, 1435
SsiI CCGC 3 cut(s) 56, 197, 1244
SspMI CTAG 5 cut(s) 325, 370, 809, 1240, 1390
StyD4I CCNGG 4 cut(s) 160, 359, 378, 877
StyI CCWWGG 5 cut(s) 263, 440, 646, 733, 1255
TaaI ACNGT 2 cut(s) 747, 1074
TaqI TCGA 2 cut(s) 1213, 1446
TasI AATT 3 cut(s) 13, 1010, 1435
TauI GCSGC 1 cut(s) 59
TfiI GAWTC 3 cut(s) 211, 477, 936
Tru1I TTAA 4 cut(s) 166, 455, 1021, 1433
Tru9I TTAA 4 cut(s) 166, 455, 1021, 1433
TscAI CASTG 1 cut(s) 551
TseFI GTSAC 3 cut(s) 542, 972, 1074
TseI GCWGC 2 cut(s) 67, 470
Tsp45I GTSAC 3 cut(s) 542, 972, 1074
TspDTI ATGAA 5 cut(s) 95, 104, 152, 191, 857
TspGWI ACGGA 2 cut(s) 679, 1201
TspRI CASTG 1 cut(s) 551
Van91I CCANNNNNTGG 1 cut(s) 759
VneI GTGCAC 1 cut(s) 1385
VpaK11BI GGWCC 2 cut(s) 199, 886
XceI RCATGY 3 cut(s) 901, 1056, 1141
XmiI GTMKAC 1 cut(s) 1213
XmnI GAANNNNTTC 1 cut(s) 413
XspI CTAG 5 cut(s) 325, 370, 809, 1240, 1390
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.