MD16G1068700.v1.1

Galactoside 2-alpha-L-fucosyltransferase-like

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr16
Physical Location & Seq
Forward (+)
4856564 .. 4857998
1435 bp
Loading structure...
UTR
Exon/CDS
Intron
MD16G1068700.v1.1.491

Sequence Viewer

Length: 1395 bp
ATGCCCAAAGACAAGCTACAAGATGGACTAATTGTTCCTGGATTTGATGAAGCCTCTTGCTTGAGCAGATATCAATCCAATTTATACAGAAAAATTTCACCCCACAAACCATCTTCTCATCTTCTCTCCGGACTGAGAAGTTATGAAGATCTTCACAAGAAGTGTGGACCCCACACCAAATCCTACAACAAAACCCTAGAACAGCTCAAGTCCGGTAGCCCTAGCACTGGCGTTGACAGTTCAGAAGAGTGCAAGTATGTGGTTTGGATATCGTACAGTGGCTTGGGGAACAAGATACTGACCATATCTTCTGCTTTCCTCTATGCCCTGCTCACAAACAGAGTCCTTCTTGTCGACCCCGGAAAGGACATGGCCGACCTCTTCTGCGAGCCCTTCCCTGAAAACTCATGGCTGTTGCCTGATGACTTCCCTGTTAAAGACCGATTCAATGCATTTGATCAGAAATCTCCTCATTGCTACGGGAATATTTTGAAATCGGAGAATAACAAGATCGCAAACGCTTCGCCATCATTTTTCTCTTTTTCTGCGATGATCGAGAAAGTTCCTTGGCTGTTTATGAGAACAGATAACTACTTTGTTCCCTCGCTTTTCTTGATGCCCTCTTTTGAGCAAGAACTCGAAAAGCTTTTCCCCGACAAGGAAACTGTTTTCCACCACTTGGGTAGGTATCTTTTCCACCCTTCAAATCATGTATGGGGATTGATCACAAGGTACTACCAAGCTTACTTGGCAAAGGCAGATGAGAGGATTGGGATTCAAGTTCGAACTTTCGAGGCAGGGCCTAGCCCGCTTCGGCATGTGATGAACCAAATCTATGCATGTGCTTTCAAGGAGAAATTGCTGCCACAGGTGGAAAGGAAGAAACCAATCGTCACATCTTCACCAGGGATGCCGAAACTGAAGTCGGTTTTAATTACTTCTCTGACCTCAGGGTATTCTGAGGATGTGAGGAACATGTACTGGGAACATCCGACTGTGAATGGGGACACAATCGGGGTTTTCCAGCCAAGTCACGAAGGGCATCAGCAGACGGATAAGAATCTGCACGACCAGAAAGCTTGGGCTGAAATGTACCTGCTTAGTTTGTGTGATGTGCTGGTCACAAGCGCATGGTCGACTTTTGGGTACGTGGCTCAAGGTCTTGGAGGTCTTAAACCGTGGATCCTGTACAAGCCGGAGAATAAGATGACGCCGGATCCGCCTTGCAGTCAAGTTATGTCGATGGAGCCGTGCTTCCATGCTCCACCGTTTTATGACTGCAAGGCGAAGAAAGGAGTAGATACGGGCGCACTTGTGCCTCATGTGAGGCATTGTGAGGATATGAGCTGGGGACTCAAGCTAGTTGATAGTCACGAATCTCATGATCAGTTGTAG

Protein Analysis

465

Amino Acids

52.72

Weight (kDa)

6.83

Isoelectric Point (pI)

47.41

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
XG_FTase PF03254 2 - 428 7e-193 Xyloglucan fucosyltransferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1104
AccB7I CCANNNNNTGG 1 cut(s) 679
AccI GTMKAC 2 cut(s) 354, 1136
AccIII TCCGGA 1 cut(s) 128
AciI CCGC 2 cut(s) 809, 1220
AclWI GGATC 4 cut(s) 1177, 1190, 1211, 1224
AcoI YGGCCR 1 cut(s) 372
AcsI RAATTY 1 cut(s) 93
AcuI CTGAAG 1 cut(s) 941
AcyI GRCGYC 1 cut(s) 1211
AfaI GTAC 6 cut(s) 275, 734, 980, 1094, 1148, 1190
AfiI CCNNNNNNNGG 4 cut(s) 227, 364, 658, 679
AflIII ACRYGT 1 cut(s) 975
AgsI TTSAA 5 cut(s) 448, 493, 705, 779, 850
AjnI CCWGG 2 cut(s) 37, 904
AloI GAACNNNNNNTCC 2 cut(s) 18, 50
AluBI AGCT 7 cut(s) 16, 205, 646, 743, 1079, 1347, 1360
AluI AGCT 7 cut(s) 16, 205, 646, 743, 1079, 1347, 1360
AlwI GGATC 4 cut(s) 1177, 1190, 1211, 1224
Aor13HI TCCGGA 1 cut(s) 128
AoxI GGCC 2 cut(s) 372, 800
ApeKI GCWGC 1 cut(s) 862
ApoI RAATTY 1 cut(s) 93
ArsI GACNNNNNNTTYG 2 cut(s) 908, 940
Asp700I GAANNNNTTC 2 cut(s) 94, 150
AspLEI GCGC 2 cut(s) 1130, 1310
AspS9I GGNCC 2 cut(s) 167, 800
AsuC2I CCSGG 1 cut(s) 360
AsuHPI GGTGA 2 cut(s) 90, 894
AsuII TTCGAA 1 cut(s) 784
AvaII GGWCC 1 cut(s) 167
AxyI CCTNAGG 1 cut(s) 949
BamHI GGATCC 2 cut(s) 1182, 1216
BanII GRGCYC 1 cut(s) 393
BbvI GCAGC 1 cut(s) 849
BccI CCATC 4 cut(s) 17, 118, 535, 1237
BceAI ACGGC 1 cut(s) 1234
BcgI CGANNNNNNTGC 2 cut(s) 504, 538
BciT130I CCWGG 2 cut(s) 39, 906
BclI TGATCA 3 cut(s) 457, 723, 1384
BcnI CCSGG 1 cut(s) 360
BfaI CTAG 4 cut(s) 197, 222, 804, 1361
BfuAI ACCTGC 1 cut(s) 1104
BglII AGATCT 1 cut(s) 148
BisI GCNGC 1 cut(s) 863
BlsI GCNGC 1 cut(s) 864
Bme1390I CCNGG 3 cut(s) 39, 360, 906
Bme18I GGWCC 1 cut(s) 167
BmgT120I GGNCC 2 cut(s) 167, 800
BmiI GGNNCC 4 cut(s) 169, 1184, 1218, 1248
BmrFI CCNGG 3 cut(s) 39, 360, 906
BmrI ACTGGG 1 cut(s) 991
BmsI GCATC 3 cut(s) 606, 900, 1051
BmuI ACTGGG 1 cut(s) 991
Bpu14I TTCGAA 1 cut(s) 784
BpuEI CTTGAG 4 cut(s) 82, 191, 1140, 1340
BpuMI CCSGG 1 cut(s) 360
BsaAI YACGTR 1 cut(s) 1150
BsaBI GATNNNNATC 2 cut(s) 73, 1059
BsaHI GRCGYC 1 cut(s) 1211
BsaJI CCNNGG 4 cut(s) 358, 566, 905, 1178
BsaWI WCCGGW 2 cut(s) 128, 212
Bsc4I CCNNNNNNNGG 4 cut(s) 227, 364, 658, 679
Bse1I ACTGG 2 cut(s) 232, 986
Bse21I CCTNAGG 1 cut(s) 949
Bse3DI GCAATG 1 cut(s) 472
Bse8I GATNNNNATC 2 cut(s) 73, 1059
BseAI TCCGGA 1 cut(s) 128
BseBI CCWGG 2 cut(s) 39, 906
BseDI CCNNGG 4 cut(s) 358, 566, 905, 1178
BseGI GGATG 3 cut(s) 915, 970, 988
BseJI GATNNNNATC 2 cut(s) 73, 1059
BseLI CCNNNNNNNGG 4 cut(s) 227, 364, 658, 679
BseMI GCAATG 1 cut(s) 472
BseMII CTCAG 3 cut(s) 125, 951, 963
BseNI ACTGG 2 cut(s) 232, 986
BseRI GAGGAG 1 cut(s) 459
BseXI GCAGC 1 cut(s) 849
BseYI CCCAGC 1 cut(s) 1347
BsgI GTGCAG 1 cut(s) 1049
BshFI GGCC 2 cut(s) 374, 802
BsiSI CCGG 5 cut(s) 129, 213, 360, 1196, 1214
BslFI GGGAC 2 cut(s) 1019, 1365
BslI CCNNNNNNNGG 4 cut(s) 227, 364, 658, 679
BsmFI GGGAC 2 cut(s) 1019, 1365
BsnI GGCC 2 cut(s) 374, 802
Bsp119I TTCGAA 1 cut(s) 784
Bsp1286I GDGCHC 1 cut(s) 393
Bsp13I TCCGGA 1 cut(s) 128
Bsp1407I TGTACA 1 cut(s) 1188
Bsp143I GATC 8 cut(s) 148, 457, 510, 552, 723, 1182, 1216, 1384
BspACI CCGC 2 cut(s) 809, 1220
BspANI GGCC 2 cut(s) 374, 802
BspCNI CTCAG 3 cut(s) 126, 952, 962
BspEI TCCGGA 1 cut(s) 128
BspHI TCATGA 1 cut(s) 1381
BspLI GGNNCC 4 cut(s) 169, 1184, 1218, 1248
BspMI ACCTGC 1 cut(s) 1104
BspPI GGATC 4 cut(s) 1177, 1190, 1211, 1224
BspT104I TTCGAA 1 cut(s) 784
BsrDI GCAATG 1 cut(s) 472
BsrGI TGTACA 1 cut(s) 1188
BsrI ACTGG 2 cut(s) 232, 986
BssECI CCNNGG 4 cut(s) 358, 566, 905, 1178
BssMI GATC 8 cut(s) 148, 457, 510, 552, 723, 1182, 1216, 1384
BssNI GRCGYC 1 cut(s) 1211
BssT1I CCWWGG 1 cut(s) 566
Bst2UI CCWGG 2 cut(s) 39, 906
Bst4CI ACNGT 6 cut(s) 239, 278, 667, 997, 1179, 1269
Bst6I CTCTTC 2 cut(s) 240, 386
BstACI GRCGYC 1 cut(s) 1211
BstAUI TGTACA 1 cut(s) 1188
BstBAI YACGTR 1 cut(s) 1150
BstBI TTCGAA 1 cut(s) 784
BstC8I GCNNGC 2 cut(s) 389, 809
BstDEI CTNAG 4 cut(s) 134, 949, 960, 1100
BstDSI CCRYGG 1 cut(s) 1178
BstF5I GGATG 3 cut(s) 915, 970, 988
BstHHI GCGC 2 cut(s) 1130, 1310
BstKTI GATC 8 cut(s) 151, 460, 513, 555, 726, 1185, 1219, 1387
BstMBI GATC 8 cut(s) 148, 457, 510, 552, 723, 1182, 1216, 1384
BstMWI GCNNNNNNNGC 3 cut(s) 749, 808, 1219
BstNI CCWGG 2 cut(s) 39, 906
BstNSI RCATGY 3 cut(s) 821, 843, 979
BstSCI CCNGG 3 cut(s) 37, 358, 904
BstV1I GCAGC 1 cut(s) 849
BstX2I RGATCY 3 cut(s) 148, 1182, 1216
BstYI RGATCY 3 cut(s) 148, 1182, 1216
Bsu36I CCTNAGG 1 cut(s) 949
BsuRI GGCC 2 cut(s) 374, 802
BtgI CCRYGG 1 cut(s) 1178
BtgZI GCGATG 1 cut(s) 563
BtsCI GGATG 3 cut(s) 915, 970, 988
BtsIMutI CAGTG 2 cut(s) 225, 283
BveI ACCTGC 1 cut(s) 1104
Cac8I GCNNGC 2 cut(s) 389, 809
CciI TCATGA 1 cut(s) 1381
CfoI GCGC 2 cut(s) 1130, 1310
Cfr13I GGNCC 2 cut(s) 167, 800
CseI GACGC 1 cut(s) 1219
Csp6I GTAC 6 cut(s) 274, 733, 979, 1093, 1147, 1189
CspCI CAANNNNNGTGG 2 cut(s) 145, 180
CviQI GTAC 6 cut(s) 274, 733, 979, 1093, 1147, 1189
DdeI CTNAG 4 cut(s) 134, 949, 960, 1100
DpnI GATC 8 cut(s) 150, 459, 512, 554, 725, 1184, 1218, 1386
DpnII GATC 8 cut(s) 148, 457, 510, 552, 723, 1182, 1216, 1384
EaeI YGGCCR 1 cut(s) 372
Eam1104I CTCTTC 2 cut(s) 240, 386
EarI CTCTTC 2 cut(s) 240, 386
EciI GGCGGA 1 cut(s) 1209
Eco130I CCWWGG 1 cut(s) 566
Eco24I GRGCYC 1 cut(s) 393
Eco32I GATATC 2 cut(s) 71, 270
Eco47I GGWCC 1 cut(s) 167
Eco57I CTGAAG 1 cut(s) 941
Eco81I CCTNAGG 1 cut(s) 949
EcoO109I RGGNCCY 1 cut(s) 800
EcoRII CCWGG 2 cut(s) 37, 904
EcoRV GATATC 2 cut(s) 71, 270
EcoT14I CCWWGG 1 cut(s) 566
EcoT22I ATGCAT 2 cut(s) 454, 841
EcoT38I GRGCYC 1 cut(s) 393
ErhI CCWWGG 1 cut(s) 566
FaqI GGGAC 2 cut(s) 1019, 1365
FauI CCCGC 1 cut(s) 816
FbaI TGATCA 3 cut(s) 457, 723, 1384
FblI GTMKAC 2 cut(s) 354, 1136
Fnu4HI GCNGC 1 cut(s) 863
FokI GGATG 3 cut(s) 922, 975, 977
FriOI GRGCYC 1 cut(s) 393
Fsp4HI GCNGC 1 cut(s) 863
FspBI CTAG 4 cut(s) 197, 222, 804, 1361
GlaI GCGC 2 cut(s) 1129, 1309
GluI GCNGC 1 cut(s) 863
GsaI CCCAGC 1 cut(s) 1351
HaeIII GGCC 2 cut(s) 374, 802
HapII CCGG 5 cut(s) 129, 213, 360, 1196, 1214
HgaI GACGC 1 cut(s) 1219
HhaI GCGC 2 cut(s) 1130, 1310
Hin1I GRCGYC 1 cut(s) 1211
Hin6I GCGC 2 cut(s) 1128, 1308
HinP1I GCGC 2 cut(s) 1128, 1308
HincII GTYRAC 3 cut(s) 235, 355, 1137
HindII GTYRAC 3 cut(s) 235, 355, 1137
HindIII AAGCTT 3 cut(s) 644, 741, 1077
HinfI GANTC 6 cut(s) 342, 444, 775, 1060, 1353, 1376
HpaII CCGG 5 cut(s) 129, 213, 360, 1196, 1214
HphI GGTGA 2 cut(s) 90, 894
Hpy166II GTNNAC 4 cut(s) 167, 235, 355, 1137
Hpy188I TCNGA 6 cut(s) 244, 462, 499, 945, 961, 993
Hpy188III TCNNGA 6 cut(s) 129, 556, 613, 1034, 1373, 1382
Hpy8I GTNNAC 4 cut(s) 167, 235, 355, 1137
HpyAV CCTTC 4 cut(s) 356, 403, 711, 1031
HpyCH4III ACNGT 6 cut(s) 239, 278, 667, 997, 1179, 1269
HpyCH4IV ACGT 1 cut(s) 1149
HpyCH4V TGCA 6 cut(s) 252, 452, 839, 1066, 1227, 1281
HpyF10VI GCNNNNNNNGC 3 cut(s) 749, 808, 1219
HpyF3I CTNAG 4 cut(s) 134, 949, 960, 1100
HpySE526I ACGT 1 cut(s) 1149
Hsp92I GRCGYC 1 cut(s) 1211
HspAI GCGC 2 cut(s) 1128, 1308
Kpn2I TCCGGA 1 cut(s) 128
Ksp22I TGATCA 3 cut(s) 457, 723, 1384
Kzo9I GATC 8 cut(s) 148, 457, 510, 552, 723, 1182, 1216, 1384
LmnI GCTCC 2 cut(s) 1246, 1267
Lsp1109I GCAGC 1 cut(s) 849
LweI GCATC 3 cut(s) 606, 900, 1051
MaeI CTAG 4 cut(s) 197, 222, 804, 1361
MaeII ACGT 1 cut(s) 1149
MaeIII GTNAC 4 cut(s) 892, 1031, 1120, 1370
MalI GATC 8 cut(s) 150, 459, 512, 554, 725, 1184, 1218, 1386
MboI GATC 8 cut(s) 148, 457, 510, 552, 723, 1182, 1216, 1384
MflI RGATCY 3 cut(s) 148, 1182, 1216
MhlI GDGCHC 1 cut(s) 393
MluCI AATT 5 cut(s) 30, 79, 93, 857, 933
MlyI GAGTC 2 cut(s) 351, 1347
MmeI TCCRAC 1 cut(s) 1016
Mph1103I ATGCAT 2 cut(s) 454, 841
MroI TCCGGA 1 cut(s) 128
MroXI GAANNNNTTC 2 cut(s) 94, 150
MseI TTAA 3 cut(s) 435, 932, 1173
MspI CCGG 5 cut(s) 129, 213, 360, 1196, 1214
MspR9I CCNGG 3 cut(s) 39, 360, 906
MvaI CCWGG 2 cut(s) 39, 906
MwoI GCNNNNNNNGC 3 cut(s) 749, 808, 1219
NciI CCSGG 1 cut(s) 360
NdeII GATC 8 cut(s) 148, 457, 510, 552, 723, 1182, 1216, 1384
NlaIV GGNNCC 4 cut(s) 169, 1184, 1218, 1248
NmuCI GTSAC 4 cut(s) 892, 1031, 1120, 1370
NsiI ATGCAT 2 cut(s) 454, 841
NspI RCATGY 3 cut(s) 821, 843, 979
NspV TTCGAA 1 cut(s) 784
PagI TCATGA 1 cut(s) 1381
PciI ACATGT 1 cut(s) 975
PcsI WCGNNNNNNNCGW 1 cut(s) 1247
PdmI GAANNNNTTC 2 cut(s) 94, 150
PfeI GAWTC 4 cut(s) 444, 775, 1060, 1376
PflMI CCANNNNNTGG 1 cut(s) 679
PfoI TCCNGGA 1 cut(s) 37
PkrI GCNGC 1 cut(s) 864
PleI GAGTC 2 cut(s) 350, 1347
PpsI GAGTC 2 cut(s) 350, 1347
Ppu21I YACGTR 1 cut(s) 1150
PscI ACATGT 1 cut(s) 975
Psp6I CCWGG 2 cut(s) 37, 904
PspFI CCCAGC 1 cut(s) 1347
PspGI CCWGG 2 cut(s) 37, 904
PspN4I GGNNCC 4 cut(s) 169, 1184, 1218, 1248
PspPI GGNCC 2 cut(s) 167, 800
PsuI RGATCY 3 cut(s) 148, 1182, 1216
RsaI GTAC 6 cut(s) 275, 734, 980, 1094, 1148, 1190
RsaNI GTAC 6 cut(s) 274, 733, 979, 1093, 1147, 1189
SalI GTCGAC 2 cut(s) 353, 1135
SaqAI TTAA 3 cut(s) 435, 932, 1173
SatI GCNGC 1 cut(s) 863
Sau3AI GATC 8 cut(s) 148, 457, 510, 552, 723, 1182, 1216, 1384
Sau96I GGNCC 2 cut(s) 167, 800
SchI GAGTC 2 cut(s) 351, 1347
ScrFI CCNGG 3 cut(s) 39, 360, 906
SduI GDGCHC 1 cut(s) 393
SfaNI GCATC 3 cut(s) 606, 900, 1051
SfuI TTCGAA 1 cut(s) 784
SinI GGWCC 1 cut(s) 167
SmlI CTYRAG 4 cut(s) 61, 206, 1155, 1355
SmoI CTYRAG 4 cut(s) 61, 206, 1155, 1355
Sse9I AATT 5 cut(s) 30, 79, 93, 857, 933
SsiI CCGC 2 cut(s) 809, 1220
SspI AATATT 1 cut(s) 487
SspMI CTAG 4 cut(s) 197, 222, 804, 1361
StyD4I CCNGG 3 cut(s) 37, 358, 904
StyI CCWWGG 1 cut(s) 566
TaaI ACNGT 6 cut(s) 239, 278, 667, 997, 1179, 1269
TaiI ACGT 1 cut(s) 1152
TaqI TCGA 7 cut(s) 354, 555, 639, 784, 792, 1136, 1241
TaqII GACCGA 1 cut(s) 456
TasI AATT 5 cut(s) 30, 79, 93, 857, 933
TatI WGTACW 2 cut(s) 978, 1188
TfiI GAWTC 4 cut(s) 444, 775, 1060, 1376
Tru1I TTAA 3 cut(s) 435, 932, 1173
Tru9I TTAA 3 cut(s) 435, 932, 1173
TscAI CASTG 2 cut(s) 232, 283
TseFI GTSAC 4 cut(s) 892, 1031, 1120, 1370
TseI GCWGC 1 cut(s) 862
Tsp45I GTSAC 4 cut(s) 892, 1031, 1120, 1370
TspDTI ATGAA 3 cut(s) 63, 159, 839
TspGWI ACGGA 1 cut(s) 1067
TspRI CASTG 2 cut(s) 232, 283
Van91I CCANNNNNTGG 1 cut(s) 679
VpaK11BI GGWCC 1 cut(s) 167
XapI RAATTY 1 cut(s) 93
XceI RCATGY 3 cut(s) 821, 843, 979
XmiI GTMKAC 2 cut(s) 354, 1136
XmnI GAANNNNTTC 2 cut(s) 94, 150
XspI CTAG 4 cut(s) 197, 222, 804, 1361
Zsp2I ATGCAT 2 cut(s) 454, 841
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.