Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000005

Orthogroup ID

OG0001503

Physical Location & Seq

Genomic Coordinates Forward (+)

60398021 .. 60400485

Gene Structure 2465 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_5G00380250.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1761 bp

ATGGTTTTTGGCGATCTGTTGAGCTCAGGGTTTTCTTTTGTAATGAATCTGATGAAGATCTTTGCTTCTCTTCTGGTGTCTCTCCCAGTTCTCATAACTATCTCTCTTGTTCTTCGCGACCCACCTCCCGATCGGATCAAGGGTTTCGCAGACGCAAGGGTTTTGGAAACGCCGTTGTCTCCGGTTACCATCTCGTCGAATATTGAGATTTTCCGAAGACCAGCACCTGTCTCAAATATCACCTCGTCAAATTCAGCAGAAAATGTTTTACCTGAGATTGAATTACCTACCCAAATTCCCAAAGAAGACAAATTATATGATGGACTCCTTGCTCCTGGGTTTGATGAAGGGTCTTGTTTGAGCAGGTACCAATCAAGTTTCTACCGCAAAATCTCAACCCACAAACCATCTCCTTATCTTCTTTCAAGACTCAGAAGCTATGAAGAACTTCATAAACGGTGTGGGCCGAATTCCAAACCCTACAGCGCATCACTGAAACAACTGAAGAAGAAGTTTCATGGTAATAGCACTGGTGCAACAGATGAGTGCAAGTATGTGGTATGGATAGCTAATAGTGGCTTGGGAAACAGAATACTGAGTATAACCGCAGCATTCCTATATGCTCTGCTCACAAACAGAGTCCTTCTTCTTGACCCTGGAAAGGACTTGCCTGACCTCTTTTGTGAGCCATTTCCAGAAACATCATGGCTTCTCTCCAATCACTTCCCCATTAAAAGCCACTTTGACAAGTTCGATCAGAAATCTCCTCGATGTTACGGTAACATGTTGAAAAAGACTAGTAATTCATCGGAATTGTCACTACCATCGTCGTACGTATATCTCCATCTAGGCCATGATTATGATCAGCAAGACAAGTTGTTTTTCTGTGATGAAGAGCATAGTCATCTTGGGAAAGTAGACTGGTTGGTTATGAAAACGGATAACTACTTTGTCCCATCACTTTTCTTGATGCCATCTTTTGAACAAGAACTCAACAAGTTGTTCCCTGAAAGAGAAACTGTTTTCCACCACTTGGGTAGGTATCTCTTCCACCCTTCAAATCATGTATGGGGGCTAATCACAAGGTACTACCAAGCTTATTTGGCAAAGGCCGACGAGATGGTTGGGATTCAAGTACGAACTTTCGAGCCGGCTGGGCCTGGTCCTTTTAAGCATGTGATGGATCAAATTTTAGCTTGTGTTTTTAGTGAGAAATTGTTGCCTCGAGTGGATAAGAACAAGCCTATTGTGGACTTCAGCTCCTTCAGCTCATCGTCAGGGAGCCCGAAGTTGAAATCGGTACTGATGACTTCTTTAAAACCAGATTACTCTGAGAATTTGAGGAGTATGTATTGGGAACATCCAACTGTGACTGGGGACTTAATTGGGGTTTTCCAACCCAGCCATGAAGGAGAGCAAAGGACTGATGATAAACTGCATGACAGAAAAGCCTTAGCAGAAATGTTTCTACTCAGTTTCTCTGATGTGTTGGTCACAAGTGCATGGTCAACATTTGGGTATGTGGCTCAAGGTCTTGGAGGTCTGAAACCATGGATTCTCTTCAAGCCGGAAAACCAAACAGTCCCGAATCCGCCTTGTCGTCGGCTCCAATCGATGGAGCCTTGTTTTCACGCTCCACCATTGTGGGACTGCAAGGAGAAAAGAGGAACTGATACAGGTGCAATAGTACCTCATGTGAGGCATTGTGAGGATATCAGCTGGGGCCTTCAGCTAATTGATACTGATAATGATCACTTATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000271 GO:0003674 GO:0003824 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005794 GO:0005975 GO:0005976 GO:0006073 GO:0008150 GO:0008152 GO:0008417 GO:0009058 GO:0009059 GO:0009250 GO:0009832 GO:0009969 GO:0009987 GO:0010383 GO:0010410 GO:0010411 GO:0012505 GO:0016051 GO:0016740 GO:0016757 GO:0016758 GO:0033692 GO:0034637 GO:0034645 GO:0036065 GO:0042546 GO:0042802 GO:0042803 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044036 GO:0044042 GO:0044085 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044262 GO:0044264 GO:0044424 GO:0044444 GO:0044464 GO:0046983 GO:0070085 GO:0071554 GO:0071669 GO:0071704 GO:0071840 GO:1901576

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

XG_FTase

Protein Analysis

586

Amino Acids

66.44

Weight (kDa)

6.6

Isoelectric Point (pI)

43.8

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
XG_FTase	PF03254	101 - 552	3.4e-202	Xyloglucan fucosyltransferase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0001503)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G03220
fragaria_vesca	FvH4_4g30950 FvH4_5g14640
malus_domestica	MD00G1081500.v1.1 MD14G1203600.v1.1 MD16G1068500.v1.1 MD16G1068600.v1.1 MD16G1068700.v1.1
prunus_persica	Prupe.1G278500_v2.0.a1 Prupe.5G196900_v2.0.a1
pyrus_communis	pycom14g16840 pycom16g05990 pycom16g06000
rosa_chinensis	RchiOBHm_Chr3g0485401 RchiOBHm_Chr3g0485411 RchiOBHm_Chr4g0439291 RchiOBHm_Chr4g0439301 RchiOBHm_Chr7g0181851
rosa_laevigata	RLG00000005169 RLG00000006282 RLG00000006284 RLG00000023152
rosa_multiflora	Rmu_co8397081.1_g000001 Rmu_sc0006598.1_g000004 Rmu_sc0006598.1_g000006 Rmu_sc0007912.1_g000001 Rmu_sc0021327.1_g000004 Rmu_ssc0000171.1_g000019
rosa_roxburghii	Rroxscaffold_3G00271700 Rroxscaffold_5G00380250
rosa_rugosa	Rorug04G0317200 Rorug04G0317200 Rorug06G0444400
rosa_samantha	Rh4AG368000 Rh4AG368100 Rh4BG379900 Rh4BG380000 Rh4CG394100 Rh4CG394200 Rh4CG394300 Rh4DG374300 Rh4DG374400 Rh7AG046700 Rh7BG046300 Rh7CG046800 Rh7DG045900
rosa_wichuraiana	Rw0G005600 Rw0G011610 Rw3G023710 Rw5G028570 Rw7G003860

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	354
Acc65I	GGTACC	1 cut(s)	366
AccB1I	GGYRCC	1 cut(s)	366
AccB7I	CCANNNNNTGG	2 cut(s)	1033, 1615
AccI	GTMKAC	1 cut(s)	918
AccII	CGCG	1 cut(s)	117
AciI	CCGC	3 cut(s)	385, 606, 1592
AclWI	GGATC	2 cut(s)	143, 1191
AcsI	RAATTY	5 cut(s)	250, 294, 469, 1188, 1336
AcuI	CTGAAG	4 cut(s)	524, 1240, 1249, 1712
AfaI	GTAC	6 cut(s)	368, 833, 1088, 1137, 1302, 1689
AfiI	CCNNNNNNNGG	3 cut(s)	661, 1033, 1615
AflIII	ACRYGT	1 cut(s)	783
AgsI	TTSAA	8 cut(s)	281, 426, 790, 983, 1059, 1133, 1294, 1564
AhlI	ACTAGT	1 cut(s)	797
AjnI	CCWGG	3 cut(s)	334, 655, 1159
AleI	CACNNNNGTG	1 cut(s)	1642
AluBI	AGCT	9 cut(s)	24, 438, 569, 1097, 1196, 1260, 1269, 1719, 1732
AluI	AGCT	9 cut(s)	24, 438, 569, 1097, 1196, 1260, 1269, 1719, 1732
Alw21I	GWGCWC	1 cut(s)	26
Alw26I	GTCTC	3 cut(s)	84, 183, 235
AlwI	GGATC	2 cut(s)	143, 1191
AlwNI	CAGNNNCTG	1 cut(s)	227
Ama87I	CYCGRG	1 cut(s)	1224
AoxI	GGCC	5 cut(s)	464, 850, 1110, 1157, 1723
ApeKI	GCWGC	1 cut(s)	608
ApoI	RAATTY	5 cut(s)	250, 294, 469, 1188, 1336
Asp700I	GAANNNNTTC	2 cut(s)	447, 1464
Asp718I	GGTACC	1 cut(s)	366
AspLEI	GCGC	1 cut(s)	488
AspS9I	GGNCC	4 cut(s)	464, 1157, 1163, 1723
AsuHPI	GGTGA	1 cut(s)	232
AvaI	CYCGRG	1 cut(s)	1224
AvaII	GGWCC	1 cut(s)	1163
BanI	GGYRCC	1 cut(s)	366
BanII	GRGCYC	2 cut(s)	26, 1286
BbsI	GAAGAC	2 cut(s)	223, 312
Bbv12I	GWGCWC	1 cut(s)	26
BbvI	GCAGC	1 cut(s)	620
BceAI	ACGGC	1 cut(s)	157
BciT130I	CCWGG	3 cut(s)	336, 657, 1161
BclI	TGATCA	2 cut(s)	862, 1750
BcoDI	GTCTC	3 cut(s)	84, 183, 235
BcuI	ACTAGT	1 cut(s)	797
BfaI	CTAG	2 cut(s)	798, 848
BfmI	CTRYAG	1 cut(s)	481
BfuAI	ACCTGC	1 cut(s)	354
BglI	GCCNNNNNGGC	1 cut(s)	1156
BglII	AGATCT	1 cut(s)	57
BisI	GCNGC	1 cut(s)	609
BlsI	GCNGC	1 cut(s)	610
Bme1390I	CCNGG	3 cut(s)	336, 657, 1161
Bme18I	GGWCC	1 cut(s)	1163
BmeT110I	CYCGRG	1 cut(s)	1224
BmgT120I	GGNCC	4 cut(s)	464, 1157, 1163, 1723
BmiI	GGNNCC	5 cut(s)	368, 1283, 1607, 1620, 1724
BmrFI	CCNGG	3 cut(s)	336, 657, 1161
BmrI	ACTGGG	2 cut(s)	80, 1383
BmsI	GCATC	2 cut(s)	497, 960
BmuI	ACTGGG	2 cut(s)	80, 1383
BpiI	GAAGAC	2 cut(s)	223, 312
Bpu10I	CCTNAGC	2 cut(s)	25, 1453
BpuEI	CTTGAG	1 cut(s)	1512
Bsa29I	ATCGAT	1 cut(s)	1613
BsaAI	YACGTR	1 cut(s)	835
BsaBI	GATNNNNATC	3 cut(s)	56, 861, 1749
BsaJI	CCNNGG	3 cut(s)	335, 655, 1550
BsaWI	WCCGGW	1 cut(s)	181
BsaXI	ACNNNNNCTCC	2 cut(s)	1244, 1274
Bsc4I	CCNNNNNNNGG	3 cut(s)	661, 1033, 1615
Bse118I	RCCGGY	1 cut(s)	1150
Bse1I	ACTGG	4 cut(s)	86, 535, 926, 1378
Bse8I	GATNNNNATC	3 cut(s)	56, 861, 1749
BseBI	CCWGG	3 cut(s)	336, 657, 1161
BseCI	ATCGAT	1 cut(s)	1613
BseDI	CCNNGG	3 cut(s)	335, 655, 1550
BseGI	GGATG	1 cut(s)	1360
BseJI	GATNNNNATC	3 cut(s)	56, 861, 1749
BseLI	CCNNNNNNNGG	3 cut(s)	661, 1033, 1615
BseMII	CTCAG	6 cut(s)	39, 264, 445, 587, 1323, 1486
BseNI	ACTGG	4 cut(s)	86, 535, 926, 1378
BseRI	GAGGAG	2 cut(s)	756, 1357
BseXI	GCAGC	1 cut(s)	620
BseYI	CCCAGC	3 cut(s)	1154, 1400, 1719
Bsh1236I	CGCG	1 cut(s)	117
Bsh1285I	CGRYCG	1 cut(s)	133
BshFI	GGCC	5 cut(s)	466, 852, 1112, 1159, 1725
BshNI	GGYRCC	1 cut(s)	366
BshVI	ATCGAT	1 cut(s)	1613
BsiEI	CGRYCG	1 cut(s)	133
BsiHKAI	GWGCWC	1 cut(s)	26
BsiHKCI	CYCGRG	1 cut(s)	1224
BsiSI	CCGG	3 cut(s)	182, 1151, 1568
BsiWI	CGTACG	1 cut(s)	831
BslFI	GGGAC	4 cut(s)	938, 1391, 1568, 1661
BslI	CCNNNNNNNGG	3 cut(s)	661, 1033, 1615
BsmAI	GTCTC	3 cut(s)	84, 183, 235
BsmFI	GGGAC	4 cut(s)	938, 1391, 1568, 1661
BsmI	GAATGC	1 cut(s)	611
BsnI	GGCC	5 cut(s)	466, 852, 1112, 1159, 1725
BsoBI	CYCGRG	1 cut(s)	1224
Bsp1286I	GDGCHC	2 cut(s)	26, 1286
Bsp143I	GATC	8 cut(s)	13, 57, 130, 135, 754, 862, 1183, 1750
Bsp19I	CCATGG	1 cut(s)	1550
Bsp68I	TCGCGA	1 cut(s)	117
BspACI	CCGC	3 cut(s)	385, 606, 1592
BspANI	GGCC	5 cut(s)	466, 852, 1112, 1159, 1725
BspCNI	CTCAG	6 cut(s)	38, 265, 444, 588, 1324, 1485
BspDI	ATCGAT	1 cut(s)	1613
BspFNI	CGCG	1 cut(s)	117
BspLI	GGNNCC	5 cut(s)	368, 1283, 1607, 1620, 1724
BspMI	ACCTGC	1 cut(s)	354
BspPI	GGATC	2 cut(s)	143, 1191
BspQI	GCTCTTC	1 cut(s)	888
BspT107I	GGYRCC	1 cut(s)	366
BsrFI	RCCGGY	1 cut(s)	1150
BsrI	ACTGG	4 cut(s)	86, 535, 926, 1378
BssAI	RCCGGY	1 cut(s)	1150
BssECI	CCNNGG	3 cut(s)	335, 655, 1550
BssMI	GATC	8 cut(s)	13, 57, 130, 135, 754, 862, 1183, 1750
BssT1I	CCWWGG	1 cut(s)	1550
Bst2UI	CCWGG	3 cut(s)	336, 657, 1161
Bst4CI	ACNGT	5 cut(s)	459, 779, 1021, 1369, 1582
Bst6I	CTCTTC	4 cut(s)	75, 888, 1052, 1565
BstBAI	YACGTR	1 cut(s)	835
BstC8I	GCNNGC	1 cut(s)	1152
BstDEI	CTNAG	7 cut(s)	25, 273, 431, 596, 1332, 1453, 1472
BstDSI	CCRYGG	1 cut(s)	1550
BstEII	GGTNACC	1 cut(s)	184
BstF5I	GGATG	1 cut(s)	1360
BstFNI	CGCG	1 cut(s)	117
BstHHI	GCGC	1 cut(s)	488
BstKTI	GATC	8 cut(s)	16, 60, 133, 138, 757, 865, 1186, 1753
BstMAI	GTCTC	3 cut(s)	84, 183, 235
BstMBI	GATC	8 cut(s)	13, 57, 130, 135, 754, 862, 1183, 1750
BstMCI	CGRYCG	1 cut(s)	133
BstMWI	GCNNNNNNNGC	3 cut(s)	1103, 1156, 1266
BstNI	CCWGG	3 cut(s)	336, 657, 1161
BstNSI	RCATGY	2 cut(s)	787, 1178
BstPI	GGTNACC	1 cut(s)	184
BstSCI	CCNGG	3 cut(s)	334, 655, 1159
BstSFI	CTRYAG	1 cut(s)	481
BstSNI	TACGTA	1 cut(s)	835
BstUI	CGCG	1 cut(s)	117
BstV1I	GCAGC	1 cut(s)	620
BstV2I	GAAGAC	2 cut(s)	223, 312
BstX2I	RGATCY	1 cut(s)	57
BstXI	CCANNNNNNTGG	1 cut(s)	1644
BstYI	RGATCY	1 cut(s)	57
Bsu15I	ATCGAT	1 cut(s)	1613
BsuRI	GGCC	5 cut(s)	466, 852, 1112, 1159, 1725
BsuTUI	ATCGAT	1 cut(s)	1613
BtgI	CCRYGG	1 cut(s)	1550
BtsCI	GGATG	1 cut(s)	1360
BtsIMutI	CAGTG	2 cut(s)	491, 528
BtuMI	TCGCGA	1 cut(s)	117
BveI	ACCTGC	1 cut(s)	354
Cac8I	GCNNGC	1 cut(s)	1152
CaiI	CAGNNNCTG	1 cut(s)	227
CfoI	GCGC	1 cut(s)	488
Cfr10I	RCCGGY	1 cut(s)	1150
Cfr13I	GGNCC	4 cut(s)	464, 1157, 1163, 1723
ClaI	ATCGAT	1 cut(s)	1613
CseI	GACGC	1 cut(s)	161
Csp6I	GTAC	6 cut(s)	367, 832, 1087, 1136, 1301, 1688
CviQI	GTAC	6 cut(s)	367, 832, 1087, 1136, 1301, 1688
DdeI	CTNAG	7 cut(s)	25, 273, 431, 596, 1332, 1453, 1472
DpnI	GATC	8 cut(s)	15, 59, 132, 137, 756, 864, 1185, 1752
DpnII	GATC	8 cut(s)	13, 57, 130, 135, 754, 862, 1183, 1750
DraI	TTTAAA	1 cut(s)	1317
Eam1104I	CTCTTC	4 cut(s)	75, 888, 1052, 1565
EarI	CTCTTC	4 cut(s)	75, 888, 1052, 1565
EciI	GGCGGA	1 cut(s)	1581
Ecl136II	GAGCTC	1 cut(s)	24
Eco105I	TACGTA	1 cut(s)	835
Eco130I	CCWWGG	1 cut(s)	1550
Eco24I	GRGCYC	2 cut(s)	26, 1286
Eco32I	GATATC	1 cut(s)	1714
Eco47I	GGWCC	1 cut(s)	1163
Eco53kI	GAGCTC	1 cut(s)	24
Eco57I	CTGAAG	4 cut(s)	524, 1240, 1249, 1712
Eco88I	CYCGRG	1 cut(s)	1224
Eco91I	GGTNACC	1 cut(s)	184
EcoICRI	GAGCTC	1 cut(s)	24
EcoO109I	RGGNCCY	1 cut(s)	1723
EcoO65I	GGTNACC	1 cut(s)	184
EcoRI	GAATTC	1 cut(s)	469
EcoRII	CCWGG	3 cut(s)	334, 655, 1159
EcoRV	GATATC	1 cut(s)	1714
EcoT14I	CCWWGG	1 cut(s)	1550
EcoT38I	GRGCYC	2 cut(s)	26, 1286
ErhI	CCWWGG	1 cut(s)	1550
FaqI	GGGAC	4 cut(s)	938, 1391, 1568, 1661
FbaI	TGATCA	2 cut(s)	862, 1750
FblI	GTMKAC	1 cut(s)	918
Fnu4HI	GCNGC	1 cut(s)	609
FokI	GGATG	1 cut(s)	1347
FriOI	GRGCYC	2 cut(s)	26, 1286
Fsp4HI	GCNGC	1 cut(s)	609
FspBI	CTAG	2 cut(s)	798, 848
GlaI	GCGC	1 cut(s)	487
GluI	GCNGC	1 cut(s)	609
GsaI	CCCAGC	3 cut(s)	1158, 1404, 1723
HaeIII	GGCC	5 cut(s)	466, 852, 1112, 1159, 1725
HapII	CCGG	3 cut(s)	182, 1151, 1568
HgaI	GACGC	1 cut(s)	161
HhaI	GCGC	1 cut(s)	488
Hin6I	GCGC	1 cut(s)	486
HinP1I	GCGC	1 cut(s)	486
HincII	GTYRAC	1 cut(s)	1509
HindII	GTYRAC	1 cut(s)	1509
HindIII	AAGCTT	1 cut(s)	1095
HinfI	GANTC	7 cut(s)	46, 324, 429, 639, 1129, 1555, 1588
HpaII	CCGG	3 cut(s)	182, 1151, 1568
HphI	GGTGA	1 cut(s)	232
Hpy166II	GTNNAC	3 cut(s)	919, 1252, 1509
Hpy188I	TCNGA	9 cut(s)	51, 135, 215, 434, 759, 811, 1333, 1483, 1545
Hpy188III	TCNNGA	7 cut(s)	116, 128, 426, 650, 695, 967, 1585
Hpy8I	GTNNAC	3 cut(s)	919, 1252, 1509
Hpy99I	CGWCG	4 cut(s)	199, 832, 1118, 1605
HpyAV	CCTTC	6 cut(s)	341, 653, 1065, 1273, 1403, 1736
HpyCH4III	ACNGT	5 cut(s)	459, 779, 1021, 1369, 1582
HpyCH4IV	ACGT	1 cut(s)	834
HpyCH4V	TGCA	6 cut(s)	536, 549, 1438, 1502, 1653, 1682
HpyF10VI	GCNNNNNNNGC	3 cut(s)	1103, 1156, 1266
HpyF3I	CTNAG	7 cut(s)	25, 273, 431, 596, 1332, 1453, 1472
HpySE526I	ACGT	1 cut(s)	834
HspAI	GCGC	1 cut(s)	486
KpnI	GGTACC	1 cut(s)	370
KroI	GCCGGC	1 cut(s)	1150
KroNI	GCCGGC	1 cut(s)	1152
Ksp22I	TGATCA	2 cut(s)	862, 1750
Kzo9I	GATC	8 cut(s)	13, 57, 130, 135, 754, 862, 1183, 1750
LguI	GCTCTTC	1 cut(s)	888
LmnI	GCTCC	6 cut(s)	337, 1265, 1281, 1611, 1618, 1639
Lsp1109I	GCAGC	1 cut(s)	620
LweI	GCATC	2 cut(s)	497, 960
MaeI	CTAG	2 cut(s)	798, 848
MaeII	ACGT	1 cut(s)	834
MaeIII	GTNAC	6 cut(s)	184, 773, 779, 816, 1369, 1492
MalI	GATC	8 cut(s)	15, 59, 132, 137, 756, 864, 1185, 1752
MboI	GATC	8 cut(s)	13, 57, 130, 135, 754, 862, 1183, 1750
MflI	RGATCY	1 cut(s)	57
MhlI	GDGCHC	2 cut(s)	26, 1286
MlyI	GAGTC	3 cut(s)	318, 423, 648
MmeI	TCCRAC	2 cut(s)	1388, 1420
MroNI	GCCGGC	1 cut(s)	1150
MroXI	GAANNNNTTC	2 cut(s)	447, 1464
MseI	TTAA	4 cut(s)	732, 1170, 1316, 1382
MslI	CAYNNNNRTG	2 cut(s)	858, 1642
MspA1I	CMGCKG	1 cut(s)	1719
MspI	CCGG	3 cut(s)	182, 1151, 1568
MspR9I	CCNGG	3 cut(s)	336, 657, 1161
Mva1269I	GAATGC	1 cut(s)	611
MvaI	CCWGG	3 cut(s)	336, 657, 1161
MvnI	CGCG	1 cut(s)	117
MwoI	GCNNNNNNNGC	3 cut(s)	1103, 1156, 1266
NaeI	GCCGGC	1 cut(s)	1152
NcoI	CCATGG	1 cut(s)	1550
NdeII	GATC	8 cut(s)	13, 57, 130, 135, 754, 862, 1183, 1750
NgoMIV	GCCGGC	1 cut(s)	1150
NlaIV	GGNNCC	5 cut(s)	368, 1283, 1607, 1620, 1724
NmuCI	GTSAC	3 cut(s)	816, 1369, 1492
NruI	TCGCGA	1 cut(s)	117
NspI	RCATGY	2 cut(s)	787, 1178
OliI	CACNNNNGTG	1 cut(s)	1642
PaeR7I	CTCGAG	1 cut(s)	1224
PciI	ACATGT	1 cut(s)	783
PciSI	GCTCTTC	1 cut(s)	888
PctI	GAATGC	1 cut(s)	611
PdiI	GCCGGC	1 cut(s)	1152
PdmI	GAANNNNTTC	2 cut(s)	447, 1464
PfeI	GAWTC	4 cut(s)	46, 1129, 1555, 1588
Pfl23II	CGTACG	1 cut(s)	831
PflMI	CCANNNNNTGG	2 cut(s)	1033, 1615
PkrI	GCNGC	1 cut(s)	610
Ple19I	CGATCG	1 cut(s)	133
PleI	GAGTC	3 cut(s)	318, 423, 647
PpsI	GAGTC	3 cut(s)	318, 423, 647
Ppu21I	YACGTR	1 cut(s)	835
PscI	ACATGT	1 cut(s)	783
Psp124BI	GAGCTC	1 cut(s)	26
Psp6I	CCWGG	3 cut(s)	334, 655, 1159
PspEI	GGTNACC	1 cut(s)	184
PspFI	CCCAGC	3 cut(s)	1154, 1400, 1719
PspGI	CCWGG	3 cut(s)	334, 655, 1159
PspLI	CGTACG	1 cut(s)	831
PspN4I	GGNNCC	5 cut(s)	368, 1283, 1607, 1620, 1724
PspPI	GGNCC	4 cut(s)	464, 1157, 1163, 1723
PspXI	VCTCGAGB	1 cut(s)	1224
PstNI	CAGNNNCTG	1 cut(s)	227
PsuI	RGATCY	1 cut(s)	57
PvuI	CGATCG	1 cut(s)	133
PvuII	CAGCTG	1 cut(s)	1719
RruI	TCGCGA	1 cut(s)	117
RsaI	GTAC	6 cut(s)	368, 833, 1088, 1137, 1302, 1689
RsaNI	GTAC	6 cut(s)	367, 832, 1087, 1136, 1301, 1688
RseI	CAYNNNNRTG	2 cut(s)	858, 1642
SacI	GAGCTC	1 cut(s)	26
SapI	GCTCTTC	1 cut(s)	888
SaqAI	TTAA	4 cut(s)	732, 1170, 1316, 1382
SatI	GCNGC	1 cut(s)	609
Sau3AI	GATC	8 cut(s)	13, 57, 130, 135, 754, 862, 1183, 1750
Sau96I	GGNCC	4 cut(s)	464, 1157, 1163, 1723
SchI	GAGTC	3 cut(s)	318, 423, 648
ScrFI	CCNGG	3 cut(s)	336, 657, 1161
SduI	GDGCHC	2 cut(s)	26, 1286
SfaNI	GCATC	2 cut(s)	497, 960
SfcI	CTRYAG	1 cut(s)	481
Sfr274I	CTCGAG	1 cut(s)	1224
SinI	GGWCC	1 cut(s)	1163
SlaI	CTCGAG	1 cut(s)	1224
SmiMI	CAYNNNNRTG	2 cut(s)	858, 1642
SmlI	CTYRAG	2 cut(s)	1224, 1527
SmoI	CTYRAG	2 cut(s)	1224, 1527
SnaBI	TACGTA	1 cut(s)	835
SpeI	ACTAGT	1 cut(s)	797
SsiI	CCGC	3 cut(s)	385, 606, 1592
SspI	AATATT	1 cut(s)	202
SspMI	CTAG	2 cut(s)	798, 848
SstI	GAGCTC	1 cut(s)	26
StyD4I	CCNGG	3 cut(s)	334, 655, 1159
StyI	CCWWGG	1 cut(s)	1550
TaaI	ACNGT	5 cut(s)	459, 779, 1021, 1369, 1582
TaiI	ACGT	1 cut(s)	837
TaqI	TCGA	6 cut(s)	197, 753, 769, 1146, 1225, 1613
TfiI	GAWTC	4 cut(s)	46, 1129, 1555, 1588
Tru1I	TTAA	4 cut(s)	732, 1170, 1316, 1382
Tru9I	TTAA	4 cut(s)	732, 1170, 1316, 1382
TscAI	CASTG	2 cut(s)	498, 535
TseFI	GTSAC	3 cut(s)	816, 1369, 1492
TseI	GCWGC	1 cut(s)	608
Tsp45I	GTSAC	3 cut(s)	816, 1369, 1492
TspGWI	ACGGA	1 cut(s)	953
TspRI	CASTG	2 cut(s)	498, 535
Van91I	CCANNNNNTGG	2 cut(s)	1033, 1615
VpaK11BI	GGWCC	1 cut(s)	1163
XapI	RAATTY	5 cut(s)	250, 294, 469, 1188, 1336
XceI	RCATGY	2 cut(s)	787, 1178
XcmI	CCANNNNNNNNNTGG	1 cut(s)	702
XhoI	CTCGAG	1 cut(s)	1224
XmiI	GTMKAC	1 cut(s)	918
XmnI	GAANNNNTTC	2 cut(s)	447, 1464
XspI	CTAG	2 cut(s)	798, 848

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.