Rh7AG046700

Galactoside 2-alpha-L-fucosyltransferase-like

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7A
Physical Location & Seq
Reverse (-)
3181909 .. 3184278
2370 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7AG046700.1

Sequence Viewer

Length: 1713 bp
ATGAAGAGGTTCAGTAAAACCCTGAACGGTGATGACCCATCAAAACACTCGGATTCGGGTACCCGTAATGCTCTGAGAGATCCGGATACGAACCCCGGTTTGAGTCCAATGAGGGTGATGGGGATCTTTATAGCTTGCTTGATTCTGTTTTCGGTTTTGTTCTCAATCAATGTGGTTCTCAGAGACCCACCTTCTGATGCTGTTCATGAAGATTCAAAAAATAGAGTTCTTGAAGTTGAACCCAGAAAAAGTTCAGAAGATCAATTTTTGGATCCTGTAGAGGTACCAAAGGATAAGTTGCTTGGCGGCCTTCTTGCTGCTGGATTTGATGAAGGATCTTGTGTCAGCAGGTACCAGTCAGCTTCATATCGTAAAGAAATGCCACATGAACCTTCTTCTTACCTTTTATCCAGGTTAAGAAGTTATGAAGCTCTGCATAAGCGTTGCGGACCTAATACTGAATCCTATAAAAAAGCCGTGGAACAACTCAAGTCTGGCCGTCATCCGACTTCCTTGGATTGTAACTATGTGGTATGGATTTCTTATAGTGGATTAGGGAATAGAATACTGACACTAGCTTCAGCATTTCTTTATGCTCTCCTGACAAACCGGGTACTACTAGTGGATCCTGGAGTGGACATGGTTGATCTATTCTGCGAACCATTTCCGGAAGCCTCATGGTTCCTCCCCATGGATTTCCCCCTTAAAAATCAGTTTGGCAGCTTGAATCAGAAATCTGCACATTGTTATGGGGAAATGGTGAGGAAGAGCAACCTCACAAATACCGACCAGTCACTGCTGTCATCTTTTGTGTATCTCCATCTGTCCCATGATTATAATGATCAAGATAAGCTTTTCTTCTGCAACCAAGATCAAGATTTTCTCAAAAAGATACCATGGTTGATCGTGAGGACGGATAACTATTTTGTCCCATCTCTTTTCTTGATCCCATCTTTTGAGCAAGAACTCGGCAATCTCTTTCCAAGGAAAGAAACAGTTTTCCATTTCTTGGGTCGGTACCTGTTCCATCCCACAAATGTGGTCTGGGGACTTATTACTAGATACTATCAGGCATATTTAGCTAAAGCAGATGAAAGAATAGGCATCCAGATCAGAGTCTTTGATACCGGGACTGGTCCATTTCAACATGTGTTTGATCAGATCCTATCCTGTGCATTGAAGGAGAATCTATTGCCAGAGACCAATGGGCAGGATCTCATAGTCACTCCATCGGGAACTTTGAAGTCCAAAGCTGTGCTAATTACTTCTTTAAGCTCCGGATACTTAGAGAAGCTAAGGGACATGTATTGGGAGCATCCTACTGTGACAGGAGAGGTGATCGGCATTTATCAGCCGAGTCATGAGGAGTATCAACAAACTGAGAAGCATGCGCACAACCGAAAGGCATGGGCTGAAATGTATTTGCTAAGCTTGACGGATGTGTTGATCACAAGCTCATGGTCGACTTTTGGTTATGTGGCGCAGAGTCTAGGCGGGCTGACACCATGGATACTCTACAAACCGGAGAATAGGACGGCCCCTGATCCTGCTTGTAAGCAAGCAATGTCAATGGAGCCTTGTTTTCACGCACCTCCCTTTTATGATTGCAAGGCCAAAACAGGAGTTGACACAGGTGCACTAGTTCCTCATGTGAGGCATTGTGAGGATATGAGTTGGGGTCTTAAATTGATTGATCGATCCGATGAGTTTTAG

Protein Analysis

570

Amino Acids

64.74

Weight (kDa)

6.07

Isoelectric Point (pI)

34.66

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
XG_FTase PF03254 86 - 537 8.4e-230 Xyloglucan fucosyltransferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 837
Acc16I TGCGCA 1 cut(s) 1392
Acc36I ACCTGC 1 cut(s) 339
Acc65I GGTACC 4 cut(s) 59, 283, 351, 1017
AccB1I GGYRCC 4 cut(s) 59, 283, 351, 1017
AccB7I CCANNNNNTGG 1 cut(s) 1009
AccI GTMKAC 1 cut(s) 1463
AccIII TCCGGA 3 cut(s) 82, 667, 1277
AciI CCGC 3 cut(s) 306, 447, 1494
AcoI YGGCCR 1 cut(s) 496
AcuI CTGAAG 1 cut(s) 564
AfaI GTAC 5 cut(s) 61, 285, 353, 615, 1019
AfiI CCNNNNNNNGG 2 cut(s) 691, 1009
AflIII ACRYGT 2 cut(s) 1147, 1302
AgsI TTSAA 7 cut(s) 216, 233, 239, 727, 1145, 1180, 1243
AhlI ACTAGT 2 cut(s) 619, 1639
AjnI CCWGG 2 cut(s) 410, 628
AleI CACNNNNGTG 1 cut(s) 1037
Alw21I GWGCWC 1 cut(s) 1639
Alw26I GTCTC 2 cut(s) 177, 1193
Alw44I GTGCAC 1 cut(s) 1635
AlwNI CAGNNNCTG 1 cut(s) 796
Aor13HI TCCGGA 3 cut(s) 82, 667, 1277
AoxI GGCC 4 cut(s) 307, 496, 1536, 1611
ApaLI GTGCAC 1 cut(s) 1635
ApeKI GCWGC 2 cut(s) 317, 720
Asp700I GAANNNNTTC 3 cut(s) 8, 250, 663
Asp718I GGTACC 4 cut(s) 59, 283, 351, 1017
AspLEI GCGC 2 cut(s) 1393, 1483
AspS9I GGNCC 3 cut(s) 449, 1136, 1537
AsuC2I CCSGG 3 cut(s) 96, 611, 1129
AsuHPI GGTGA 4 cut(s) 41, 127, 772, 1348
AvaII GGWCC 2 cut(s) 449, 1136
BaeGI GKGCMC 1 cut(s) 1639
BaeI ACNNNNGTAYC 2 cut(s) 884, 917
BamHI GGATCC 2 cut(s) 271, 625
BanI GGYRCC 4 cut(s) 59, 283, 351, 1017
Bbv12I GWGCWC 1 cut(s) 1639
BbvI GCAGC 2 cut(s) 304, 732
BccI CCATC 7 cut(s) 46, 112, 828, 940, 958, 1035, 1237
BceAI ACGGC 3 cut(s) 461, 483, 1551
BciT130I CCWGG 2 cut(s) 412, 630
BciVI GTATCC 3 cut(s) 79, 1274, 1503
BclI TGATCA 3 cut(s) 841, 1156, 1446
BcnI CCSGG 3 cut(s) 96, 611, 1129
BcoDI GTCTC 2 cut(s) 177, 1193
BcuI ACTAGT 2 cut(s) 619, 1639
BfaI CTAG 5 cut(s) 575, 620, 1059, 1490, 1640
BfmI CTRYAG 1 cut(s) 276
BfuAI ACCTGC 1 cut(s) 339
BfuI GTATCC 3 cut(s) 79, 1274, 1503
BisI GCNGC 3 cut(s) 307, 318, 721
BlpI GCTNAGC 1 cut(s) 1427
BlsI GCNGC 3 cut(s) 308, 319, 722
Bme1390I CCNGG 5 cut(s) 96, 412, 611, 630, 1129
Bme18I GGWCC 2 cut(s) 449, 1136
BmgT120I GGNCC 3 cut(s) 449, 1136, 1537
BmiI GGNNCC 9 cut(s) 61, 273, 285, 353, 627, 683, 1019, 1539, 1575
BmrFI CCNGG 5 cut(s) 96, 412, 611, 630, 1129
BmsI GCATC 3 cut(s) 187, 1113, 1324
BpmI CTGGAG 1 cut(s) 651
Bpu10I CCTNAGC 1 cut(s) 1295
Bpu1102I GCTNAGC 1 cut(s) 1427
BpuEI CTTGAG 1 cut(s) 473
BpuMI CCSGG 3 cut(s) 96, 611, 1129
Bsa29I ATCGAT 1 cut(s) 1696
BsaBI GATNNNNATC 1 cut(s) 122
BsaI GGTCTC 2 cut(s) 177, 1193
BsaJI CCNNGG 7 cut(s) 94, 477, 513, 690, 896, 983, 1505
BsaWI WCCGGW 4 cut(s) 82, 667, 1277, 1522
Bsc4I CCNNNNNNNGG 2 cut(s) 691, 1009
Bse1I ACTGG 3 cut(s) 355, 790, 1138
Bse3DI GCAATG 1 cut(s) 1569
Bse8I GATNNNNATC 1 cut(s) 122
BseAI TCCGGA 3 cut(s) 82, 667, 1277
BseBI CCWGG 2 cut(s) 412, 630
BseCI ATCGAT 1 cut(s) 1696
BseDI CCNNGG 7 cut(s) 94, 477, 513, 690, 896, 983, 1505
BseGI GGATG 5 cut(s) 502, 1027, 1104, 1315, 1444
BseJI GATNNNNATC 1 cut(s) 122
BseLI CCNNNNNNNGG 2 cut(s) 691, 1009
BseMI GCAATG 1 cut(s) 1569
BseMII CTCAG 3 cut(s) 65, 193, 1371
BseNI ACTGG 3 cut(s) 355, 790, 1138
BseRI GAGGAG 1 cut(s) 1379
BseSI GKGCMC 1 cut(s) 1639
BseXI GCAGC 2 cut(s) 304, 732
BsgI GTGCAG 1 cut(s) 723
BshFI GGCC 4 cut(s) 309, 498, 1538, 1613
BshNI GGYRCC 4 cut(s) 59, 283, 351, 1017
BshVI ATCGAT 1 cut(s) 1696
BsiHKAI GWGCWC 1 cut(s) 1639
BsiSI CCGG 7 cut(s) 83, 96, 610, 668, 1128, 1278, 1523
BslFI GGGAC 5 cut(s) 811, 914, 1062, 1144, 1313
BslI CCNNNNNNNGG 2 cut(s) 691, 1009
BsmAI GTCTC 2 cut(s) 177, 1193
BsmFI GGGAC 5 cut(s) 811, 914, 1062, 1144, 1313
BsnI GGCC 4 cut(s) 309, 498, 1538, 1613
Bso31I GGTCTC 2 cut(s) 177, 1193
Bsp1286I GDGCHC 1 cut(s) 1639
Bsp13I TCCGGA 3 cut(s) 82, 667, 1277
Bsp1720I GCTNAGC 1 cut(s) 1427
Bsp19I CCATGG 3 cut(s) 690, 896, 1505
BspACI CCGC 3 cut(s) 306, 447, 1494
BspANI GGCC 4 cut(s) 309, 498, 1538, 1613
BspCNI CTCAG 3 cut(s) 66, 192, 1372
BspDI ATCGAT 1 cut(s) 1696
BspEI TCCGGA 3 cut(s) 82, 667, 1277
BspHI TCATGA 2 cut(s) 205, 1360
BspLI GGNNCC 9 cut(s) 61, 273, 285, 353, 627, 683, 1019, 1539, 1575
BspMI ACCTGC 1 cut(s) 339
BspQI GCTCTTC 1 cut(s) 761
BspT107I GGYRCC 4 cut(s) 59, 283, 351, 1017
BspTNI GGTCTC 2 cut(s) 177, 1193
BsrDI GCAATG 1 cut(s) 1569
BsrI ACTGG 3 cut(s) 355, 790, 1138
BssECI CCNNGG 7 cut(s) 94, 477, 513, 690, 896, 983, 1505
BssT1I CCWWGG 5 cut(s) 513, 690, 896, 983, 1505
Bst2UI CCWGG 2 cut(s) 412, 630
Bst4CI ACNGT 3 cut(s) 29, 997, 1324
Bst6I CTCTTC 1 cut(s) 761
BstC8I GCNNGC 4 cut(s) 136, 1389, 1496, 1560
BstDEI CTNAG 6 cut(s) 74, 179, 1285, 1295, 1380, 1427
BstDSI CCRYGG 4 cut(s) 477, 690, 896, 1505
BstF5I GGATG 5 cut(s) 502, 1027, 1104, 1315, 1444
BstHHI GCGC 2 cut(s) 1393, 1483
BstMAI GTCTC 2 cut(s) 177, 1193
BstMWI GCNNNNNNNGC 1 cut(s) 1079
BstNI CCWGG 2 cut(s) 412, 630
BstNSI RCATGY 3 cut(s) 1151, 1306, 1391
BstSCI CCNGG 5 cut(s) 94, 410, 609, 628, 1127
BstSFI CTRYAG 1 cut(s) 276
BstSLI GKGCMC 1 cut(s) 1639
BstV1I GCAGC 2 cut(s) 304, 732
BstX2I RGATCY 7 cut(s) 79, 123, 271, 335, 625, 1161, 1213
BstXI CCANNNNNNTGG 1 cut(s) 1039
BstYI RGATCY 7 cut(s) 79, 123, 271, 335, 625, 1161, 1213
Bsu15I ATCGAT 1 cut(s) 1696
BsuI GTATCC 3 cut(s) 79, 1274, 1503
BsuRI GGCC 4 cut(s) 309, 498, 1538, 1613
BsuTUI ATCGAT 1 cut(s) 1696
BtgI CCRYGG 4 cut(s) 477, 690, 896, 1505
BtsCI GGATG 5 cut(s) 502, 1027, 1104, 1315, 1444
BtsI GCAGTG 1 cut(s) 794
BtsIMutI CAGTG 1 cut(s) 794
BveI ACCTGC 1 cut(s) 339
Cac8I GCNNGC 4 cut(s) 136, 1389, 1496, 1560
CaiI CAGNNNCTG 1 cut(s) 796
CciI TCATGA 2 cut(s) 205, 1360
CfoI GCGC 2 cut(s) 1393, 1483
Cfr13I GGNCC 3 cut(s) 449, 1136, 1537
ClaI ATCGAT 1 cut(s) 1696
Csp6I GTAC 5 cut(s) 60, 284, 352, 614, 1018
CspCI CAANNNNNGTGG 2 cut(s) 153, 188
CviQI GTAC 5 cut(s) 60, 284, 352, 614, 1018
DdeI CTNAG 6 cut(s) 74, 179, 1285, 1295, 1380, 1427
EaeI YGGCCR 1 cut(s) 496
Eam1104I CTCTTC 1 cut(s) 761
EarI CTCTTC 1 cut(s) 761
Eco130I CCWWGG 5 cut(s) 513, 690, 896, 983, 1505
Eco31I GGTCTC 2 cut(s) 177, 1193
Eco47I GGWCC 2 cut(s) 449, 1136
Eco57I CTGAAG 1 cut(s) 564
EcoRII CCWGG 2 cut(s) 410, 628
EcoT14I CCWWGG 5 cut(s) 513, 690, 896, 983, 1505
ErhI CCWWGG 5 cut(s) 513, 690, 896, 983, 1505
FalI AAGNNNNNCTT 4 cut(s) 837, 869, 842, 874
FaqI GGGAC 5 cut(s) 811, 914, 1062, 1144, 1313
FauI CCCGC 1 cut(s) 1487
FbaI TGATCA 3 cut(s) 841, 1156, 1446
FblI GTMKAC 1 cut(s) 1463
Fnu4HI GCNGC 3 cut(s) 307, 318, 721
FokI GGATG 5 cut(s) 489, 1014, 1091, 1302, 1451
Fsp4HI GCNGC 3 cut(s) 307, 318, 721
FspAI RTGCGCAY 1 cut(s) 1392
FspBI CTAG 5 cut(s) 575, 620, 1059, 1490, 1640
FspI TGCGCA 1 cut(s) 1392
GlaI GCGC 2 cut(s) 1392, 1482
GluI GCNGC 3 cut(s) 307, 318, 721
GsuI CTGGAG 1 cut(s) 651
HaeIII GGCC 4 cut(s) 309, 498, 1538, 1613
HapII CCGG 7 cut(s) 83, 96, 610, 668, 1128, 1278, 1523
HhaI GCGC 2 cut(s) 1393, 1483
Hin6I GCGC 2 cut(s) 1391, 1481
HinP1I GCGC 2 cut(s) 1391, 1481
HincII GTYRAC 2 cut(s) 1464, 1627
HindII GTYRAC 2 cut(s) 1464, 1627
HindIII AAGCTT 2 cut(s) 851, 1429
HpaII CCGG 7 cut(s) 83, 96, 610, 668, 1128, 1278, 1523
HphI GGTGA 4 cut(s) 41, 127, 772, 1348
Hpy166II GTNNAC 4 cut(s) 637, 1464, 1627, 1637
Hpy8I GTNNAC 4 cut(s) 637, 1464, 1627, 1637
HpyAV CCTTC 5 cut(s) 201, 320, 326, 402, 1174
HpyCH4III ACNGT 3 cut(s) 29, 997, 1324
HpyCH4V TGCA 6 cut(s) 436, 740, 864, 1175, 1608, 1637
HpyF10VI GCNNNNNNNGC 1 cut(s) 1079
HpyF3I CTNAG 6 cut(s) 74, 179, 1285, 1295, 1380, 1427
HspAI GCGC 2 cut(s) 1391, 1481
Kpn2I TCCGGA 3 cut(s) 82, 667, 1277
KpnI GGTACC 4 cut(s) 63, 287, 355, 1021
Ksp22I TGATCA 3 cut(s) 841, 1156, 1446
LguI GCTCTTC 1 cut(s) 761
LmnI GCTCC 3 cut(s) 1280, 1312, 1573
Lsp1109I GCAGC 2 cut(s) 304, 732
LweI GCATC 3 cut(s) 187, 1113, 1324
MaeI CTAG 5 cut(s) 575, 620, 1059, 1490, 1640
MaeIII GTNAC 4 cut(s) 521, 792, 1222, 1324
MboII GAAGA 6 cut(s) 16, 221, 269, 387, 778, 850
MflI RGATCY 7 cut(s) 79, 123, 271, 335, 625, 1161, 1213
MhlI GDGCHC 1 cut(s) 1639
MluCI AATT 3 cut(s) 263, 1260, 1685
MlyI GAGTC 4 cut(s) 112, 1125, 1366, 1495
MmeI TCCRAC 1 cut(s) 530
MroI TCCGGA 3 cut(s) 82, 667, 1277
MroXI GAANNNNTTC 3 cut(s) 8, 250, 663
MseI TTAA 4 cut(s) 416, 705, 1271, 1683
MslI CAYNNNNRTG 2 cut(s) 747, 1037
MspI CCGG 7 cut(s) 83, 96, 610, 668, 1128, 1278, 1523
MspR9I CCNGG 5 cut(s) 96, 412, 611, 630, 1129
MvaI CCWGG 2 cut(s) 412, 630
MwoI GCNNNNNNNGC 1 cut(s) 1079
NciI CCSGG 3 cut(s) 96, 611, 1129
NcoI CCATGG 3 cut(s) 690, 896, 1505
NlaIV GGNNCC 9 cut(s) 61, 273, 285, 353, 627, 683, 1019, 1539, 1575
NmeAIII GCCGAG 2 cut(s) 948, 1380
NmuCI GTSAC 3 cut(s) 792, 1222, 1324
NsbI TGCGCA 1 cut(s) 1392
NspI RCATGY 3 cut(s) 1151, 1306, 1391
OliI CACNNNNGTG 1 cut(s) 1037
PaeI GCATGC 1 cut(s) 1391
PagI TCATGA 2 cut(s) 205, 1360
PciI ACATGT 2 cut(s) 1147, 1302
PciSI GCTCTTC 1 cut(s) 761
PdmI GAANNNNTTC 3 cut(s) 8, 250, 663
PfeI GAWTC 6 cut(s) 53, 142, 212, 461, 727, 1186
PflMI CCANNNNNTGG 1 cut(s) 1009
PfoI TCCNGGA 1 cut(s) 628
PkrI GCNGC 3 cut(s) 308, 319, 722
PleI GAGTC 4 cut(s) 111, 1124, 1365, 1494
PpsI GAGTC 4 cut(s) 111, 1124, 1365, 1494
PscI ACATGT 2 cut(s) 1147, 1302
PsiI TTATAA 1 cut(s) 837
Psp6I CCWGG 2 cut(s) 410, 628
PspGI CCWGG 2 cut(s) 410, 628
PspN4I GGNNCC 9 cut(s) 61, 273, 285, 353, 627, 683, 1019, 1539, 1575
PspPI GGNCC 3 cut(s) 449, 1136, 1537
PstNI CAGNNNCTG 1 cut(s) 796
PsuI RGATCY 7 cut(s) 79, 123, 271, 335, 625, 1161, 1213
RsaI GTAC 5 cut(s) 61, 285, 353, 615, 1019
RsaNI GTAC 5 cut(s) 60, 284, 352, 614, 1018
RseI CAYNNNNRTG 2 cut(s) 747, 1037
SalI GTCGAC 1 cut(s) 1462
SapI GCTCTTC 1 cut(s) 761
SaqAI TTAA 4 cut(s) 416, 705, 1271, 1683
SatI GCNGC 3 cut(s) 307, 318, 721
Sau96I GGNCC 3 cut(s) 449, 1136, 1537
SchI GAGTC 4 cut(s) 112, 1125, 1366, 1495
ScrFI CCNGG 5 cut(s) 96, 412, 611, 630, 1129
SduI GDGCHC 1 cut(s) 1639
SfaNI GCATC 3 cut(s) 187, 1113, 1324
SfcI CTRYAG 1 cut(s) 276
SinI GGWCC 2 cut(s) 449, 1136
SmiMI CAYNNNNRTG 2 cut(s) 747, 1037
SmlI CTYRAG 1 cut(s) 488
SmoI CTYRAG 1 cut(s) 488
SpeI ACTAGT 2 cut(s) 619, 1639
SphI GCATGC 1 cut(s) 1391
Sse9I AATT 3 cut(s) 263, 1260, 1685
SsiI CCGC 3 cut(s) 306, 447, 1494
SspMI CTAG 5 cut(s) 575, 620, 1059, 1490, 1640
StyD4I CCNGG 5 cut(s) 94, 410, 609, 628, 1127
StyI CCWWGG 5 cut(s) 513, 690, 896, 983, 1505
TaaI ACNGT 3 cut(s) 29, 997, 1324
TaqI TCGA 2 cut(s) 1463, 1696
TasI AATT 3 cut(s) 263, 1260, 1685
TauI GCSGC 1 cut(s) 309
TfiI GAWTC 6 cut(s) 53, 142, 212, 461, 727, 1186
Tru1I TTAA 4 cut(s) 416, 705, 1271, 1683
Tru9I TTAA 4 cut(s) 416, 705, 1271, 1683
TscAI CASTG 1 cut(s) 801
TseFI GTSAC 3 cut(s) 792, 1222, 1324
TseI GCWGC 2 cut(s) 317, 720
Tsp45I GTSAC 3 cut(s) 792, 1222, 1324
TspDTI ATGAA 8 cut(s) 17, 194, 222, 345, 354, 402, 441, 1107
TspGWI ACGGA 2 cut(s) 929, 1451
TspRI CASTG 1 cut(s) 801
Van91I CCANNNNNTGG 1 cut(s) 1009
VneI GTGCAC 1 cut(s) 1635
VpaK11BI GGWCC 2 cut(s) 449, 1136
XceI RCATGY 3 cut(s) 1151, 1306, 1391
XmiI GTMKAC 1 cut(s) 1463
XmnI GAANNNNTTC 3 cut(s) 8, 250, 663
XspI CTAG 5 cut(s) 575, 620, 1059, 1490, 1640
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.