Rmu_sc0006598.1_g000004

Galactoside 2-alpha-L-fucosyltransferase-like

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006598.1
Physical Location & Seq
Reverse (-)
11064 .. 13273
2210 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0006598.1_g000004.1.cds

Sequence Viewer

Length: 1710 bp
atgaatctgatgaagatctttgcttctcttctggtgtctctcccagttctcataactatctctcttgttcttcgcgacccacctcccgatcggatcaagggtttcgcagacgcaagggttttggaaacgccgtcgtctccggttaccacctcgtcgaatattgagattttccgaagaccagcacctgtctcaaatatcaccttgtcaaattcagcagaaaatgttttacctgagattgaattacctacccaaattcccaaagaagacaaattatatgatggactccttgctcctgggtttgatgaagggtcttgtttgagcaggtaccaatcaagtttctaccgcaaaatctcaacccacaaaccatcttcttatcttctttcaagactcagaagctatgaagaacttcataaacggtgtgggccgaattccaaaccctacagcgcatcactgaaacaactgaagaagaagtttaatggaaagagcactgctgcaacagatgagtgcaagtatgtggtatggatagctaatagtggcttgggaaacagaatactgagtataaccgcagcattcctatatgctctgctcacaaacagagtccttctccttgaccctggaaaggacttgcctgacctcttttgtgagccattttcagacacatcatggcttctctccaatcacttccccattaaaagccactttgacaagttcgatcagaaatctcctcgttgttacggtaacatgttgaaaaagactagtaattcatcggaattgtcactaccatcgtcgtacgtatatctccatctaggccatgattatgatcagcaagacaagttgtttttctgtgatgaagagcagagtcatcttgggaaagtagactggttggttatgaaaacggataactactttgtcccatcacttttcttgatgccatcttttgagcaagaacttaacaagttgttccctgaaagagagactgttttccaccacttgggtaggtatctcttccacccttcaaatcatgtatgggggctaatcacaaggtactaccaagcttatttggcaaaggccgacgagatggttgggattcaagtaagaactttcgagcctgctgggcctggtccttttaagcatgtgatggatcaaattttagcttgtgtttttagtgagaaattgttgcctcgagtggatgagaacaagcctattgtggacttcagttcatcgtcagggaccccgaagttgaaatcggtactgatgacttctttaaaaccagattactctgagaatttgaggagtatgtattgggaacatccaactgtgactggggacttaattggggttttccaacccagccatgaaggagagcaaaggactgatgataaactgcatgacagaaaagccttagcagaaatgtttctactcagtttctctgatgtgttggtcacaagtgcatggtcaacatttgggtatgtggctcaaggtcttggaggtctgaaaccatggattctcttcaagccggaaaaccaaacagtcccaaatccaccttgtcgtcggctccaatcgatggagccttgttttcacgctccaccattgtgggactgcaaggagaaaagaggaactgatacaggtgcaatagtacctcatgtgaggcattgtgaggatatcagctggggccttcagctaattgatactcataatgatcacttatag

Protein Analysis

569

Amino Acids

64.61

Weight (kDa)

6.7

Isoelectric Point (pI)

44.23

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 312
Acc65I GGTACC 1 cut(s) 324
AccB1I GGYRCC 1 cut(s) 324
AccB7I CCANNNNNTGG 2 cut(s) 991, 1564
AccI GTMKAC 1 cut(s) 876
AccII CGCG 1 cut(s) 75
AciI CCGC 2 cut(s) 343, 564
AclWI GGATC 2 cut(s) 101, 1149
AcsI RAATTY 5 cut(s) 208, 252, 427, 1146, 1285
AcuI CTGAAG 3 cut(s) 482, 1198, 1661
AfaI GTAC 5 cut(s) 326, 791, 1046, 1251, 1638
AfiI CCNNNNNNNGG 3 cut(s) 619, 991, 1564
AflIII ACRYGT 1 cut(s) 741
AgsI TTSAA 7 cut(s) 239, 384, 748, 1017, 1091, 1243, 1513
AhlI ACTAGT 1 cut(s) 755
AjnI CCWGG 3 cut(s) 292, 613, 1117
AleI CACNNNNGTG 1 cut(s) 1591
AluBI AGCT 6 cut(s) 396, 527, 1055, 1154, 1668, 1681
AluI AGCT 6 cut(s) 396, 527, 1055, 1154, 1668, 1681
Alw21I GWGCWC 1 cut(s) 488
Alw26I GTCTC 4 cut(s) 42, 141, 193, 968
AlwI GGATC 2 cut(s) 101, 1149
AlwNI CAGNNNCTG 1 cut(s) 185
Ama87I CYCGRG 1 cut(s) 1182
AoxI GGCC 5 cut(s) 422, 808, 1068, 1115, 1672
ApeKI GCWGC 2 cut(s) 491, 566
ApoI RAATTY 5 cut(s) 208, 252, 427, 1146, 1285
Asp700I GAANNNNTTC 2 cut(s) 405, 1413
Asp718I GGTACC 1 cut(s) 324
AspLEI GCGC 1 cut(s) 446
AspS9I GGNCC 5 cut(s) 422, 1115, 1121, 1230, 1672
AsuHPI GGTGA 1 cut(s) 190
AvaI CYCGRG 1 cut(s) 1182
AvaII GGWCC 2 cut(s) 1121, 1230
BanI GGYRCC 1 cut(s) 324
BbsI GAAGAC 2 cut(s) 181, 270
Bbv12I GWGCWC 1 cut(s) 488
BbvI GCAGC 2 cut(s) 478, 578
BccI CCATC 9 cut(s) 272, 373, 790, 810, 922, 940, 1072, 1132, 1558
BceAI ACGGC 1 cut(s) 115
BciT130I CCWGG 3 cut(s) 294, 615, 1119
BclI TGATCA 2 cut(s) 820, 1699
BcoDI GTCTC 4 cut(s) 42, 141, 193, 968
BcuI ACTAGT 1 cut(s) 755
BfaI CTAG 2 cut(s) 756, 806
BfmI CTRYAG 1 cut(s) 439
BfuAI ACCTGC 1 cut(s) 312
BglI GCCNNNNNGGC 1 cut(s) 1114
BglII AGATCT 1 cut(s) 15
BisI GCNGC 2 cut(s) 492, 567
BlsI GCNGC 2 cut(s) 493, 568
Bme1390I CCNGG 3 cut(s) 294, 615, 1119
Bme18I GGWCC 2 cut(s) 1121, 1230
BmeT110I CYCGRG 1 cut(s) 1182
BmgT120I GGNCC 5 cut(s) 422, 1115, 1121, 1230, 1672
BmiI GGNNCC 6 cut(s) 326, 1231, 1232, 1556, 1569, 1673
BmrFI CCNGG 3 cut(s) 294, 615, 1119
BmrI ACTGGG 2 cut(s) 38, 1332
BmsI GCATC 2 cut(s) 455, 918
BmuI ACTGGG 2 cut(s) 38, 1332
BpiI GAAGAC 2 cut(s) 181, 270
BplI GAGNNNNNCTC 2 cut(s) 588, 620
Bpu10I CCTNAGC 1 cut(s) 1402
BpuEI CTTGAG 1 cut(s) 1461
Bsa29I ATCGAT 1 cut(s) 1562
BsaAI YACGTR 1 cut(s) 793
BsaBI GATNNNNATC 2 cut(s) 14, 819
BsaJI CCNNGG 3 cut(s) 293, 613, 1499
BsaWI WCCGGW 1 cut(s) 139
Bsc4I CCNNNNNNNGG 3 cut(s) 619, 991, 1564
Bse1I ACTGG 3 cut(s) 44, 884, 1327
Bse8I GATNNNNATC 2 cut(s) 14, 819
BseBI CCWGG 3 cut(s) 294, 615, 1119
BseCI ATCGAT 1 cut(s) 1562
BseDI CCNNGG 3 cut(s) 293, 613, 1499
BseGI GGATG 2 cut(s) 1195, 1309
BseJI GATNNNNATC 2 cut(s) 14, 819
BseLI CCNNNNNNNGG 3 cut(s) 619, 991, 1564
BseMII CTCAG 5 cut(s) 222, 403, 545, 1272, 1435
BseNI ACTGG 3 cut(s) 44, 884, 1327
BseRI GAGGAG 2 cut(s) 714, 1306
BseXI GCAGC 2 cut(s) 478, 578
BseYI CCCAGC 3 cut(s) 1112, 1349, 1668
Bsh1236I CGCG 1 cut(s) 75
Bsh1285I CGRYCG 1 cut(s) 91
BshFI GGCC 5 cut(s) 424, 810, 1070, 1117, 1674
BshNI GGYRCC 1 cut(s) 324
BshVI ATCGAT 1 cut(s) 1562
BsiEI CGRYCG 1 cut(s) 91
BsiHKAI GWGCWC 1 cut(s) 488
BsiHKCI CYCGRG 1 cut(s) 1182
BsiSI CCGG 2 cut(s) 140, 1517
BsiWI CGTACG 1 cut(s) 789
BslFI GGGAC 5 cut(s) 896, 1243, 1340, 1517, 1610
BslI CCNNNNNNNGG 3 cut(s) 619, 991, 1564
BsmAI GTCTC 4 cut(s) 42, 141, 193, 968
BsmBI CGTCTC 1 cut(s) 141
BsmFI GGGAC 5 cut(s) 896, 1243, 1340, 1517, 1610
BsmI GAATGC 1 cut(s) 569
BsnI GGCC 5 cut(s) 424, 810, 1070, 1117, 1674
BsoBI CYCGRG 1 cut(s) 1182
Bsp1286I GDGCHC 1 cut(s) 488
Bsp143I GATC 7 cut(s) 15, 88, 93, 712, 820, 1141, 1699
Bsp19I CCATGG 1 cut(s) 1499
Bsp68I TCGCGA 1 cut(s) 75
BspACI CCGC 2 cut(s) 343, 564
BspANI GGCC 5 cut(s) 424, 810, 1070, 1117, 1674
BspCNI CTCAG 5 cut(s) 223, 402, 546, 1273, 1434
BspDI ATCGAT 1 cut(s) 1562
BspFNI CGCG 1 cut(s) 75
BspLI GGNNCC 6 cut(s) 326, 1231, 1232, 1556, 1569, 1673
BspMI ACCTGC 1 cut(s) 312
BspPI GGATC 2 cut(s) 101, 1149
BspQI GCTCTTC 1 cut(s) 846
BspT107I GGYRCC 1 cut(s) 324
BsrI ACTGG 3 cut(s) 44, 884, 1327
BssECI CCNNGG 3 cut(s) 293, 613, 1499
BssMI GATC 7 cut(s) 15, 88, 93, 712, 820, 1141, 1699
BssT1I CCWWGG 1 cut(s) 1499
Bst2UI CCWGG 3 cut(s) 294, 615, 1119
Bst4CI ACNGT 5 cut(s) 417, 737, 979, 1318, 1531
Bst6I CTCTTC 4 cut(s) 33, 846, 1010, 1514
BstBAI YACGTR 1 cut(s) 793
BstC8I GCNNGC 1 cut(s) 1110
BstDEI CTNAG 6 cut(s) 231, 389, 554, 1281, 1402, 1421
BstDSI CCRYGG 1 cut(s) 1499
BstEII GGTNACC 1 cut(s) 142
BstF5I GGATG 2 cut(s) 1195, 1309
BstFNI CGCG 1 cut(s) 75
BstHHI GCGC 1 cut(s) 446
BstKTI GATC 7 cut(s) 18, 91, 96, 715, 823, 1144, 1702
BstMAI GTCTC 4 cut(s) 42, 141, 193, 968
BstMBI GATC 7 cut(s) 15, 88, 93, 712, 820, 1141, 1699
BstMCI CGRYCG 1 cut(s) 91
BstMWI GCNNNNNNNGC 2 cut(s) 1061, 1114
BstNI CCWGG 3 cut(s) 294, 615, 1119
BstNSI RCATGY 2 cut(s) 745, 1136
BstPI GGTNACC 1 cut(s) 142
BstSCI CCNGG 3 cut(s) 292, 613, 1117
BstSFI CTRYAG 1 cut(s) 439
BstSNI TACGTA 1 cut(s) 793
BstUI CGCG 1 cut(s) 75
BstV1I GCAGC 2 cut(s) 478, 578
BstV2I GAAGAC 2 cut(s) 181, 270
BstX2I RGATCY 1 cut(s) 15
BstXI CCANNNNNNTGG 1 cut(s) 1593
BstYI RGATCY 1 cut(s) 15
Bsu15I ATCGAT 1 cut(s) 1562
BsuRI GGCC 5 cut(s) 424, 810, 1070, 1117, 1674
BsuTUI ATCGAT 1 cut(s) 1562
BtgI CCRYGG 1 cut(s) 1499
BtsCI GGATG 2 cut(s) 1195, 1309
BtsI GCAGTG 1 cut(s) 486
BtsIMutI CAGTG 2 cut(s) 449, 486
BtuMI TCGCGA 1 cut(s) 75
BveI ACCTGC 1 cut(s) 312
Cac8I GCNNGC 1 cut(s) 1110
CaiI CAGNNNCTG 1 cut(s) 185
CfoI GCGC 1 cut(s) 446
Cfr13I GGNCC 5 cut(s) 422, 1115, 1121, 1230, 1672
ClaI ATCGAT 1 cut(s) 1562
CseI GACGC 1 cut(s) 119
Csp6I GTAC 5 cut(s) 325, 790, 1045, 1250, 1637
CviQI GTAC 5 cut(s) 325, 790, 1045, 1250, 1637
DdeI CTNAG 6 cut(s) 231, 389, 554, 1281, 1402, 1421
DpnI GATC 7 cut(s) 17, 90, 95, 714, 822, 1143, 1701
DpnII GATC 7 cut(s) 15, 88, 93, 712, 820, 1141, 1699
DraI TTTAAA 1 cut(s) 1266
Eam1104I CTCTTC 4 cut(s) 33, 846, 1010, 1514
EarI CTCTTC 4 cut(s) 33, 846, 1010, 1514
Eco105I TACGTA 1 cut(s) 793
Eco130I CCWWGG 1 cut(s) 1499
Eco32I GATATC 1 cut(s) 1663
Eco47I GGWCC 2 cut(s) 1121, 1230
Eco57I CTGAAG 3 cut(s) 482, 1198, 1661
Eco88I CYCGRG 1 cut(s) 1182
Eco91I GGTNACC 1 cut(s) 142
EcoO109I RGGNCCY 2 cut(s) 1230, 1672
EcoO65I GGTNACC 1 cut(s) 142
EcoRI GAATTC 1 cut(s) 427
EcoRII CCWGG 3 cut(s) 292, 613, 1117
EcoRV GATATC 1 cut(s) 1663
EcoT14I CCWWGG 1 cut(s) 1499
ErhI CCWWGG 1 cut(s) 1499
Esp3I CGTCTC 1 cut(s) 141
FaqI GGGAC 5 cut(s) 896, 1243, 1340, 1517, 1610
FbaI TGATCA 2 cut(s) 820, 1699
FblI GTMKAC 1 cut(s) 876
Fnu4HI GCNGC 2 cut(s) 492, 567
FokI GGATG 2 cut(s) 1202, 1296
Fsp4HI GCNGC 2 cut(s) 492, 567
FspBI CTAG 2 cut(s) 756, 806
GlaI GCGC 1 cut(s) 445
GluI GCNGC 2 cut(s) 492, 567
GsaI CCCAGC 3 cut(s) 1116, 1353, 1672
HaeIII GGCC 5 cut(s) 424, 810, 1070, 1117, 1674
HapII CCGG 2 cut(s) 140, 1517
HgaI GACGC 1 cut(s) 119
HhaI GCGC 1 cut(s) 446
Hin6I GCGC 1 cut(s) 444
HinP1I GCGC 1 cut(s) 444
HincII GTYRAC 1 cut(s) 1458
HindII GTYRAC 1 cut(s) 1458
HindIII AAGCTT 1 cut(s) 1053
HinfI GANTC 7 cut(s) 4, 282, 387, 597, 859, 1087, 1504
HpaII CCGG 2 cut(s) 140, 1517
HphI GGTGA 1 cut(s) 190
Hpy166II GTNNAC 3 cut(s) 877, 1210, 1458
Hpy188III TCNNGA 4 cut(s) 74, 86, 384, 925
Hpy8I GTNNAC 3 cut(s) 877, 1210, 1458
Hpy99I CGWCG 5 cut(s) 136, 157, 790, 1076, 1554
HpyAV CCTTC 5 cut(s) 299, 611, 1023, 1352, 1685
HpyCH4III ACNGT 5 cut(s) 417, 737, 979, 1318, 1531
HpyCH4IV ACGT 1 cut(s) 792
HpyCH4V TGCA 6 cut(s) 494, 507, 1387, 1451, 1602, 1631
HpyF10VI GCNNNNNNNGC 2 cut(s) 1061, 1114
HpyF3I CTNAG 6 cut(s) 231, 389, 554, 1281, 1402, 1421
HpySE526I ACGT 1 cut(s) 792
HspAI GCGC 1 cut(s) 444
KflI GGGWCCC 1 cut(s) 1230
KpnI GGTACC 1 cut(s) 328
Ksp22I TGATCA 2 cut(s) 820, 1699
Kzo9I GATC 7 cut(s) 15, 88, 93, 712, 820, 1141, 1699
LguI GCTCTTC 1 cut(s) 846
LmnI GCTCC 4 cut(s) 295, 1560, 1567, 1588
Lsp1109I GCAGC 2 cut(s) 478, 578
LweI GCATC 2 cut(s) 455, 918
MaeI CTAG 2 cut(s) 756, 806
MaeII ACGT 1 cut(s) 792
MaeIII GTNAC 6 cut(s) 142, 731, 737, 774, 1318, 1441
MalI GATC 7 cut(s) 17, 90, 95, 714, 822, 1143, 1701
MboI GATC 7 cut(s) 15, 88, 93, 712, 820, 1141, 1699
MflI RGATCY 1 cut(s) 15
MhlI GDGCHC 1 cut(s) 488
MlyI GAGTC 4 cut(s) 276, 381, 606, 868
MmeI TCCRAC 2 cut(s) 1337, 1369
MroXI GAANNNNTTC 2 cut(s) 405, 1413
MseI TTAA 6 cut(s) 474, 690, 951, 1128, 1265, 1331
MslI CAYNNNNRTG 2 cut(s) 816, 1591
MspA1I CMGCKG 1 cut(s) 1668
MspI CCGG 2 cut(s) 140, 1517
MspR9I CCNGG 3 cut(s) 294, 615, 1119
Mva1269I GAATGC 1 cut(s) 569
MvaI CCWGG 3 cut(s) 294, 615, 1119
MvnI CGCG 1 cut(s) 75
MwoI GCNNNNNNNGC 2 cut(s) 1061, 1114
NcoI CCATGG 1 cut(s) 1499
NdeII GATC 7 cut(s) 15, 88, 93, 712, 820, 1141, 1699
NlaIV GGNNCC 6 cut(s) 326, 1231, 1232, 1556, 1569, 1673
NmuCI GTSAC 3 cut(s) 774, 1318, 1441
NruI TCGCGA 1 cut(s) 75
NspI RCATGY 2 cut(s) 745, 1136
OliI CACNNNNGTG 1 cut(s) 1591
PaeR7I CTCGAG 1 cut(s) 1182
PciI ACATGT 1 cut(s) 741
PciSI GCTCTTC 1 cut(s) 846
PctI GAATGC 1 cut(s) 569
PdmI GAANNNNTTC 2 cut(s) 405, 1413
PfeI GAWTC 3 cut(s) 4, 1087, 1504
Pfl23II CGTACG 1 cut(s) 789
PflMI CCANNNNNTGG 2 cut(s) 991, 1564
PkrI GCNGC 2 cut(s) 493, 568
Ple19I CGATCG 1 cut(s) 91
PleI GAGTC 4 cut(s) 276, 381, 605, 867
PpsI GAGTC 4 cut(s) 276, 381, 605, 867
Ppu21I YACGTR 1 cut(s) 793
PpuMI RGGWCCY 1 cut(s) 1230
PscI ACATGT 1 cut(s) 741
Psp5II RGGWCCY 1 cut(s) 1230
Psp6I CCWGG 3 cut(s) 292, 613, 1117
PspEI GGTNACC 1 cut(s) 142
PspFI CCCAGC 3 cut(s) 1112, 1349, 1668
PspGI CCWGG 3 cut(s) 292, 613, 1117
PspLI CGTACG 1 cut(s) 789
PspN4I GGNNCC 6 cut(s) 326, 1231, 1232, 1556, 1569, 1673
PspPI GGNCC 5 cut(s) 422, 1115, 1121, 1230, 1672
PspPPI RGGWCCY 1 cut(s) 1230
PspXI VCTCGAGB 1 cut(s) 1182
PstNI CAGNNNCTG 1 cut(s) 185
PsuI RGATCY 1 cut(s) 15
PvuI CGATCG 1 cut(s) 91
PvuII CAGCTG 1 cut(s) 1668
RruI TCGCGA 1 cut(s) 75
RsaI GTAC 5 cut(s) 326, 791, 1046, 1251, 1638
RsaNI GTAC 5 cut(s) 325, 790, 1045, 1250, 1637
RseI CAYNNNNRTG 2 cut(s) 816, 1591
SapI GCTCTTC 1 cut(s) 846
SaqAI TTAA 6 cut(s) 474, 690, 951, 1128, 1265, 1331
SatI GCNGC 2 cut(s) 492, 567
Sau3AI GATC 7 cut(s) 15, 88, 93, 712, 820, 1141, 1699
Sau96I GGNCC 5 cut(s) 422, 1115, 1121, 1230, 1672
SchI GAGTC 4 cut(s) 276, 381, 606, 868
ScrFI CCNGG 3 cut(s) 294, 615, 1119
SduI GDGCHC 1 cut(s) 488
SfaNI GCATC 2 cut(s) 455, 918
SfcI CTRYAG 1 cut(s) 439
Sfr274I CTCGAG 1 cut(s) 1182
SinI GGWCC 2 cut(s) 1121, 1230
SlaI CTCGAG 1 cut(s) 1182
SmiMI CAYNNNNRTG 2 cut(s) 816, 1591
SmlI CTYRAG 2 cut(s) 1182, 1476
SmoI CTYRAG 2 cut(s) 1182, 1476
SnaBI TACGTA 1 cut(s) 793
SpeI ACTAGT 1 cut(s) 755
SsiI CCGC 2 cut(s) 343, 564
SspI AATATT 1 cut(s) 160
SspMI CTAG 2 cut(s) 756, 806
StyD4I CCNGG 3 cut(s) 292, 613, 1117
StyI CCWWGG 1 cut(s) 1499
TaaI ACNGT 5 cut(s) 417, 737, 979, 1318, 1531
TaiI ACGT 1 cut(s) 795
TaqI TCGA 5 cut(s) 155, 711, 1104, 1183, 1562
TfiI GAWTC 3 cut(s) 4, 1087, 1504
Tru1I TTAA 6 cut(s) 474, 690, 951, 1128, 1265, 1331
Tru9I TTAA 6 cut(s) 474, 690, 951, 1128, 1265, 1331
TscAI CASTG 2 cut(s) 456, 493
TseFI GTSAC 3 cut(s) 774, 1318, 1441
TseI GCWGC 2 cut(s) 491, 566
Tsp45I GTSAC 3 cut(s) 774, 1318, 1441
TspGWI ACGGA 1 cut(s) 911
TspRI CASTG 2 cut(s) 456, 493
Van91I CCANNNNNTGG 2 cut(s) 991, 1564
VpaK11BI GGWCC 2 cut(s) 1121, 1230
XapI RAATTY 5 cut(s) 208, 252, 427, 1146, 1285
XceI RCATGY 2 cut(s) 745, 1136
XhoI CTCGAG 1 cut(s) 1182
XmiI GTMKAC 1 cut(s) 876
XmnI GAANNNNTTC 2 cut(s) 405, 1413
XspI CTAG 2 cut(s) 756, 806
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.