AT2G03220

Xyloglucan fucosyltransferase

Basic Information

Type: gene
Biological Identity
arabidopsis_thaliana
2
Physical Location & Seq
Reverse (-)
970245 .. 972416
2172 bp
Loading structure...
UTR
Exon/CDS
Intron
AT2G03220.1

Sequence Viewer

Length: 1677 bp
ATGGATCAGAATTCGTACAGGAGAAGATCGTCTCCGATCAGAACCACTACCGGCGGTTCAAAGTCCGTTAATTTCTCCGAACTACTTCAAATGAAGTATCTCAGCTCCGGTACGATGAAGCTCACGAGAACCTTCACTACTTGCTTGATAGTCTTCTCTGTACTAGTAGCATTCTCAATGATCTTTCACCAACACCCATCTGATTCAAATCGGATTATGGGTTTCGCCGAAGCTAGAGTTCTCGACGCCGGAGTTTTCCCAAATGTTACTAACATCAATTCTGATAAGCTTCTCGGAGGGCTACTTGCTTCTGGTTTTGATGAAGATTCTTGCCTTAGTAGGTACCAATCAGTTCATTACCGTAAACCTTCACCTTACAAGCCATCTTCTTATCTCATCTCTAAGCTTAGAAACTACGAAAAGCTTCACAAGCGATGTGGTCCGGGTACTGAATCTTACAAGAAAGCTCTAAAACAACTTGATCAAGAACATATTGATGGTGATGGTGAATGCAAATATGTTGTGTGGATTTCTTTTAGCGGCTTAGGGAACAGGATACTTTCTCTAGCCTCGGTTTTTCTTTACGCGCTTTTAACGGATAGAGTCTTGCTTGTTGACCGAGGGAAAGACATGGATGATCTCTTTTGCGAGCCGTTTCTCGGTATGTCGTGGTTGCTACCTTTAGATTTCCCTATGACTGATCAGTTTGATGGATTAAATCAAGAATCATCTCGTTGTTATGGATATATGGTGAAGAATCAGGTGATTGATACTGAGGGAACTTTGTCTCATCTTTATCTTCATCTTGTTCATGATTATGGAGATCATGATAAGATGTTCTTCTGTGAAGGAGACCAAACATTCATCGGGAAAGTCCCTTGGTTGATTGTTAAAACAGACAATTACTTTGTTCCATCTCTGTGGTTAATACCGGGTTTCGATGATGAACTAAACAAGCTATTCCCACAGAAAGCGACTGTCTTTCATCACTTAGGTAGGTATCTTTTTCACCCAACTAACCAAGTATGGGGCTTAGTCACTAGATACTACGAAGCTTACTTATCGCATGCGGATGAGAAGATTGGGATTCAAGTAAGAGTTTTCGATGAAGACCCGGGTCCATTTCAGCATGTGATGGATCAGATTTCATCTTGTACTCAAAAAGAGAAACTTCTACCTGAAGTAGACACACTAGTGGAGAGATCTCGCCATGTTAATACCCCCAAACACAAAGCCGTGCTTGTCACATCTTTGAACGCGGGTTACGCGGAGAACTTAAAGAGTATGTATTGGGAATATCCGACATCAACTGGAGAAATCATCGGTGTTCATCAGCCGAGCCAAGAAGGTTATCAGCAGACCGAAAAAAAGATGCATAATGGCAAAGCTCTTGCGGAAATGTATCTTTTGAGTTTGACAGATAATCTTGTGACAAGTGCTTGGTCTACATTTGGATATGTAGCTCAAGGTCTTGGAGGTTTAAAGCCTTGGATACTCTATAGACCCGAAAACCGTACAACTCCCGATCCTTCGTGTGGTCGGGCTATGTCGATGGAGCCTTGTTTCCACTCGCCTCCATTCTATGATTGTAAAGCGAAAACGGGTATTGACACGGGAACACTAGTTCCTCATGTGAGACATTGTGAGGATATCAGCTGGGGACTTAAGCTAGTATGA

Protein Analysis

558

Amino Acids

63.45

Weight (kDa)

6.49

Isoelectric Point (pI)

41.99

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
XG_FTase PF03254 92 - 531 9.5e-205 Xyloglucan fucosyltransferase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 342
AccB1I GGYRCC 1 cut(s) 342
AccI GTMKAC 2 cut(s) 1185, 1445
AccII CGCG 3 cut(s) 587, 1259, 1268
AciI CCGC 6 cut(s) 54, 540, 1070, 1259, 1268, 1394
AclWI GGATC 3 cut(s) 12, 1146, 1520
AcsI RAATTY 1 cut(s) 10
AcuI CTGAAG 1 cut(s) 1200
AcyI GRCGYC 1 cut(s) 246
AfaI GTAC 7 cut(s) 17, 112, 162, 344, 448, 1156, 1516
AfiI CCNNNNNNNGG 3 cut(s) 659, 1027, 1535
AflII CTTAAG 1 cut(s) 1664
AgsI TTSAA 5 cut(s) 60, 89, 207, 1091, 1255
AhlI ACTAGT 3 cut(s) 163, 1192, 1621
AleI CACNNNNGTG 1 cut(s) 1193
AloI GAACNNNNNNTCC 4 cut(s) 1608, 1609, 1640, 1641
Alw26I GTCTC 4 cut(s) 36, 792, 846, 1630
AlwI GGATC 3 cut(s) 12, 1146, 1520
Ama87I CYCGRG 1 cut(s) 1114
ApoI RAATTY 1 cut(s) 10
ArsI GACNNNNNNTTYG 2 cut(s) 890, 922
Asp700I GAANNNNTTC 2 cut(s) 84, 423
Asp718I GGTACC 1 cut(s) 342
AspLEI GCGC 1 cut(s) 589
AspS9I GGNCC 2 cut(s) 440, 1118
AsuC2I CCSGG 4 cut(s) 444, 933, 1115, 1116
AsuHPI GGTGA 7 cut(s) 179, 363, 512, 518, 763, 775, 1001
AvaI CYCGRG 1 cut(s) 1114
AvaII GGWCC 2 cut(s) 440, 1118
BanI GGYRCC 1 cut(s) 342
BauI CACGAG 1 cut(s) 124
BbsI GAAGAC 2 cut(s) 145, 1116
BccI CCATC 8 cut(s) 205, 391, 491, 497, 704, 922, 1129, 1546
BceAI ACGGC 2 cut(s) 637, 1220
BciVI GTATCC 2 cut(s) 549, 1485
BclI TGATCA 2 cut(s) 481, 700
BcnI CCSGG 4 cut(s) 444, 933, 1115, 1116
BcoDI GTCTC 4 cut(s) 36, 792, 846, 1630
BcuI ACTAGT 3 cut(s) 163, 1192, 1621
BfaI CTAG 7 cut(s) 164, 234, 566, 1041, 1193, 1622, 1670
BfmI CTRYAG 1 cut(s) 1498
BfrI CTTAAG 1 cut(s) 1664
BfuI GTATCC 2 cut(s) 549, 1485
BglII AGATCT 1 cut(s) 1202
BisI GCNGC 1 cut(s) 541
BlsI GCNGC 1 cut(s) 542
Bme1390I CCNGG 4 cut(s) 444, 933, 1115, 1116
Bme18I GGWCC 2 cut(s) 440, 1118
BmeT110I CYCGRG 1 cut(s) 1114
BmgT120I GGNCC 2 cut(s) 440, 1118
BmiI GGNNCC 3 cut(s) 344, 1119, 1557
BmrFI CCNGG 4 cut(s) 444, 933, 1115, 1116
BmsI GCATC 1 cut(s) 1362
BoxI GACNNNNGTC 1 cut(s) 1116
BpiI GAAGAC 2 cut(s) 145, 1116
BpmI CTGGAG 1 cut(s) 1332
Bpu10I CCTNAGC 1 cut(s) 544
BpuEI CTTGAG 1 cut(s) 1449
BpuMI CCSGG 4 cut(s) 444, 933, 1115, 1116
BsaBI GATNNNNATC 1 cut(s) 207
BsaHI GRCGYC 1 cut(s) 246
BsaI GGTCTC 1 cut(s) 846
BsaJI CCNNGG 5 cut(s) 570, 619, 878, 1114, 1487
BsaWI WCCGGW 1 cut(s) 107
Bsc4I CCNNNNNNNGG 3 cut(s) 659, 1027, 1535
Bse118I RCCGGY 1 cut(s) 50
Bse1I ACTGG 1 cut(s) 1315
Bse8I GATNNNNATC 1 cut(s) 207
BseDI CCNNGG 5 cut(s) 570, 619, 878, 1114, 1487
BseGI GGATG 2 cut(s) 640, 1078
BseJI GATNNNNATC 1 cut(s) 207
BseLI CCNNNNNNNGG 3 cut(s) 659, 1027, 1535
BseMII CTCAG 2 cut(s) 115, 765
BseNI ACTGG 1 cut(s) 1315
BseYI CCCAGC 1 cut(s) 1656
Bsh1236I CGCG 3 cut(s) 587, 1259, 1268
BshNI GGYRCC 1 cut(s) 342
BsiHKCI CYCGRG 1 cut(s) 1114
BsiSI CCGG 6 cut(s) 51, 108, 249, 443, 932, 1115
BslFI GGGAC 1 cut(s) 860
BslI CCNNNNNNNGG 3 cut(s) 659, 1027, 1535
BsmAI GTCTC 4 cut(s) 36, 792, 846, 1630
BsmBI CGTCTC 1 cut(s) 36
BsmFI GGGAC 1 cut(s) 860
BsmI GAATGC 2 cut(s) 170, 515
Bso31I GGTCTC 1 cut(s) 846
BsoBI CYCGRG 1 cut(s) 1114
BspACI CCGC 6 cut(s) 54, 540, 1070, 1259, 1268, 1394
BspCNI CTCAG 2 cut(s) 114, 766
BspFNI CGCG 3 cut(s) 587, 1259, 1268
BspHI TCATGA 2 cut(s) 811, 826
BspLI GGNNCC 3 cut(s) 344, 1119, 1557
BspPI GGATC 3 cut(s) 12, 1146, 1520
BspT107I GGYRCC 1 cut(s) 342
BspTI CTTAAG 1 cut(s) 1664
BspTNI GGTCTC 1 cut(s) 846
BsrFI RCCGGY 1 cut(s) 50
BsrI ACTGG 1 cut(s) 1315
BssAI RCCGGY 1 cut(s) 50
BssECI CCNNGG 5 cut(s) 570, 619, 878, 1114, 1487
BssNI GRCGYC 1 cut(s) 246
BssSI CACGAG 1 cut(s) 124
BssT1I CCWWGG 2 cut(s) 878, 1487
Bst2BI CACGAG 1 cut(s) 124
Bst4CI ACNGT 3 cut(s) 362, 979, 1514
BstACI GRCGYC 1 cut(s) 246
BstAFI CTTAAG 1 cut(s) 1664
BstC8I GCNNGC 2 cut(s) 650, 1068
BstDEI CTNAG 8 cut(s) 101, 335, 402, 407, 544, 774, 991, 1033
BstF5I GGATG 2 cut(s) 640, 1078
BstFNI CGCG 3 cut(s) 587, 1259, 1268
BstHHI GCGC 1 cut(s) 589
BstMAI GTCTC 4 cut(s) 36, 792, 846, 1630
BstMWI GCNNNNNNNGC 2 cut(s) 430, 1265
BstNSI RCATGY 2 cut(s) 1070, 1133
BstPAI GACNNNNGTC 1 cut(s) 1116
BstSCI CCNGG 4 cut(s) 442, 931, 1113, 1114
BstSFI CTRYAG 1 cut(s) 1498
BstUI CGCG 3 cut(s) 587, 1259, 1268
BstV2I GAAGAC 2 cut(s) 145, 1116
BstX2I RGATCY 1 cut(s) 1202
BstXI CCANNNNNNTGG 1 cut(s) 921
BstYI RGATCY 1 cut(s) 1202
BsuI GTATCC 2 cut(s) 549, 1485
BtgZI GCGATG 1 cut(s) 448
BtsCI GGATG 2 cut(s) 640, 1078
Cac8I GCNNGC 2 cut(s) 650, 1068
CciI TCATGA 2 cut(s) 811, 826
CfoI GCGC 1 cut(s) 589
Cfr10I RCCGGY 1 cut(s) 50
Cfr13I GGNCC 2 cut(s) 440, 1118
Cfr9I CCCGGG 1 cut(s) 1114
CseI GACGC 1 cut(s) 254
Csp6I GTAC 7 cut(s) 16, 111, 161, 343, 447, 1155, 1515
CspCI CAANNNNNGTGG 2 cut(s) 418, 453
CviAII CATG 7 cut(s) 631, 812, 827, 1067, 1130, 1211, 1631
CviQI GTAC 7 cut(s) 16, 111, 161, 343, 447, 1155, 1515
DdeI CTNAG 8 cut(s) 101, 335, 402, 407, 544, 774, 991, 1033
DraI TTTAAA 1 cut(s) 1482
Eco130I CCWWGG 2 cut(s) 878, 1487
Eco31I GGTCTC 1 cut(s) 846
Eco32I GATATC 1 cut(s) 1651
Eco47I GGWCC 2 cut(s) 440, 1118
Eco57I CTGAAG 1 cut(s) 1200
Eco88I CYCGRG 1 cut(s) 1114
EcoRI GAATTC 1 cut(s) 10
EcoRV GATATC 1 cut(s) 1651
EcoT14I CCWWGG 2 cut(s) 878, 1487
EcoT22I ATGCAT 1 cut(s) 1377
ErhI CCWWGG 2 cut(s) 878, 1487
Esp3I CGTCTC 1 cut(s) 36
FaeI CATG 7 cut(s) 634, 815, 830, 1070, 1133, 1214, 1634
FalI AAGNNNNNCTT 6 cut(s) 824, 856, 1155, 1187, 1224, 1256
FaqI GGGAC 1 cut(s) 860
FatI CATG 7 cut(s) 630, 811, 826, 1066, 1129, 1210, 1630
FauI CCCGC 1 cut(s) 1252
FbaI TGATCA 2 cut(s) 481, 700
FblI GTMKAC 2 cut(s) 1185, 1445
Fnu4HI GCNGC 1 cut(s) 541
FokI GGATG 2 cut(s) 647, 1085
Fsp4HI GCNGC 1 cut(s) 541
FspBI CTAG 7 cut(s) 164, 234, 566, 1041, 1193, 1622, 1670
GlaI GCGC 1 cut(s) 588
GluI GCNGC 1 cut(s) 541
GsaI CCCAGC 1 cut(s) 1660
GsuI CTGGAG 1 cut(s) 1332
HapII CCGG 6 cut(s) 51, 108, 249, 443, 932, 1115
HgaI GACGC 1 cut(s) 254
HhaI GCGC 1 cut(s) 589
Hin1I GRCGYC 1 cut(s) 246
Hin1II CATG 7 cut(s) 634, 815, 830, 1070, 1133, 1214, 1634
Hin6I GCGC 1 cut(s) 587
HinP1I GCGC 1 cut(s) 587
HincII GTYRAC 1 cut(s) 616
HindII GTYRAC 1 cut(s) 616
HindIII AAGCTT 4 cut(s) 287, 404, 422, 1053
HinfI GANTC 7 cut(s) 203, 326, 452, 603, 725, 757, 1087
HpaII CCGG 6 cut(s) 51, 108, 249, 443, 932, 1115
HphI GGTGA 7 cut(s) 179, 363, 512, 518, 763, 775, 1001
Hpy166II GTNNAC 4 cut(s) 365, 616, 1186, 1446
Hpy188III TCNNGA 8 cut(s) 124, 242, 485, 722, 812, 827, 868, 1523
Hpy8I GTNNAC 4 cut(s) 365, 616, 1186, 1446
Hpy99I CGWCG 1 cut(s) 248
HpyAV CCTTC 5 cut(s) 142, 378, 842, 1340, 1539
HpyCH4III ACNGT 3 cut(s) 362, 979, 1514
HpyCH4V TGCA 2 cut(s) 513, 1375
HpyF10VI GCNNNNNNNGC 2 cut(s) 430, 1265
HpyF3I CTNAG 8 cut(s) 101, 335, 402, 407, 544, 774, 991, 1033
Hsp92I GRCGYC 1 cut(s) 246
Hsp92II CATG 7 cut(s) 634, 815, 830, 1070, 1133, 1214, 1634
HspAI GCGC 1 cut(s) 587
KpnI GGTACC 1 cut(s) 346
Ksp22I TGATCA 2 cut(s) 481, 700
LmnI GCTCC 2 cut(s) 110, 1555
LweI GCATC 1 cut(s) 1362
MaeI CTAG 7 cut(s) 164, 234, 566, 1041, 1193, 1622, 1670
MaeIII GTNAC 5 cut(s) 265, 1036, 1243, 1262, 1429
MboII GAAGA 9 cut(s) 36, 145, 335, 378, 766, 791, 832, 1090, 1121
MflI RGATCY 1 cut(s) 1202
MluCI AATT 4 cut(s) 10, 70, 277, 901
MlyI GAGTC 1 cut(s) 612
MmeI TCCRAC 1 cut(s) 1325
MnlI CCTC 8 cut(s) 290, 580, 614, 769, 1469, 1584, 1638, 1639
Mph1103I ATGCAT 1 cut(s) 1377
MroXI GAANNNNTTC 2 cut(s) 84, 423
MseI TTAA 9 cut(s) 69, 593, 716, 891, 926, 1215, 1277, 1481, 1665
MslI CAYNNNNRTG 5 cut(s) 495, 816, 919, 1071, 1193
MspA1I CMGCKG 1 cut(s) 1656
MspCI CTTAAG 1 cut(s) 1664
MspI CCGG 6 cut(s) 51, 108, 249, 443, 932, 1115
MspR9I CCNGG 4 cut(s) 444, 933, 1115, 1116
Mva1269I GAATGC 2 cut(s) 170, 515
MvnI CGCG 3 cut(s) 587, 1259, 1268
MwoI GCNNNNNNNGC 2 cut(s) 430, 1265
NciI CCSGG 4 cut(s) 444, 933, 1115, 1116
NlaIII CATG 7 cut(s) 634, 815, 830, 1070, 1133, 1214, 1634
NlaIV GGNNCC 3 cut(s) 344, 1119, 1557
NmeAIII GCCGAG 1 cut(s) 1362
NmuCI GTSAC 3 cut(s) 1036, 1243, 1429
NsiI ATGCAT 1 cut(s) 1377
NspI RCATGY 2 cut(s) 1070, 1133
OliI CACNNNNGTG 1 cut(s) 1193
PaeI GCATGC 1 cut(s) 1070
PagI TCATGA 2 cut(s) 811, 826
PctI GAATGC 2 cut(s) 170, 515
PdmI GAANNNNTTC 2 cut(s) 84, 423
PfeI GAWTC 6 cut(s) 203, 326, 452, 725, 757, 1087
PkrI GCNGC 1 cut(s) 542
PleI GAGTC 1 cut(s) 611
PpsI GAGTC 1 cut(s) 611
PshAI GACNNNNGTC 1 cut(s) 1116
PspFI CCCAGC 1 cut(s) 1656
PspN4I GGNNCC 3 cut(s) 344, 1119, 1557
PspPI GGNCC 2 cut(s) 440, 1118
PsrI GAACNNNNNNTAC 4 cut(s) 121, 153, 1247, 1279
PsuI RGATCY 1 cut(s) 1202
PvuII CAGCTG 1 cut(s) 1656
RsaI GTAC 7 cut(s) 17, 112, 162, 344, 448, 1156, 1516
RsaNI GTAC 7 cut(s) 16, 111, 161, 343, 447, 1155, 1515
RseI CAYNNNNRTG 5 cut(s) 495, 816, 919, 1071, 1193
SaqAI TTAA 9 cut(s) 69, 593, 716, 891, 926, 1215, 1277, 1481, 1665
SatI GCNGC 1 cut(s) 541
Sau96I GGNCC 2 cut(s) 440, 1118
SchI GAGTC 1 cut(s) 612
ScrFI CCNGG 4 cut(s) 444, 933, 1115, 1116
SfaNI GCATC 1 cut(s) 1362
SfcI CTRYAG 1 cut(s) 1498
SinI GGWCC 2 cut(s) 440, 1118
SmaI CCCGGG 1 cut(s) 1116
SmiMI CAYNNNNRTG 5 cut(s) 495, 816, 919, 1071, 1193
SmlI CTYRAG 2 cut(s) 1464, 1664
SmoI CTYRAG 2 cut(s) 1464, 1664
SpeI ACTAGT 3 cut(s) 163, 1192, 1621
SphI GCATGC 1 cut(s) 1070
Sse9I AATT 4 cut(s) 10, 70, 277, 901
SsiI CCGC 6 cut(s) 54, 540, 1070, 1259, 1268, 1394
SspMI CTAG 7 cut(s) 164, 234, 566, 1041, 1193, 1622, 1670
StyD4I CCNGG 4 cut(s) 442, 931, 1113, 1114
StyI CCWWGG 2 cut(s) 878, 1487
TaaI ACNGT 3 cut(s) 362, 979, 1514
TaqI TCGA 4 cut(s) 243, 939, 1104, 1550
TaqII GACCGA 2 cut(s) 633, 1376
TasI AATT 4 cut(s) 10, 70, 277, 901
TatI WGTACW 2 cut(s) 160, 1154
TauI GCSGC 1 cut(s) 543
TfiI GAWTC 6 cut(s) 203, 326, 452, 725, 757, 1087
Tru1I TTAA 9 cut(s) 69, 593, 716, 891, 926, 1215, 1277, 1481, 1665
Tru9I TTAA 9 cut(s) 69, 593, 716, 891, 926, 1215, 1277, 1481, 1665
TseFI GTSAC 3 cut(s) 1036, 1243, 1429
Tsp45I GTSAC 3 cut(s) 1036, 1243, 1429
TspGWI ACGGA 2 cut(s) 55, 611
TspMI CCCGGG 1 cut(s) 1114
Vha464I CTTAAG 1 cut(s) 1664
VpaK11BI GGWCC 2 cut(s) 440, 1118
XapI RAATTY 1 cut(s) 10
XceI RCATGY 2 cut(s) 1070, 1133
XmaI CCCGGG 1 cut(s) 1114
XmiI GTMKAC 2 cut(s) 1185, 1445
XmnI GAANNNNTTC 2 cut(s) 84, 423
XspI CTAG 7 cut(s) 164, 234, 566, 1041, 1193, 1622, 1670
Zsp2I ATGCAT 1 cut(s) 1377
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.