RchiOBHm_Chr7g0181841

DnaJ molecular chaperone homology domain

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
OG0005502
Physical Location & Seq
Forward (+)
3355378 .. 3361864
6487 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ16219

Sequence Viewer

Length: 2238 bp
ATGACACGTGTCCGCATCCCATTGGAAAAAGCCCATCGCTCAGCTCCCACTTTAAAAGGTCGTGCTTGCTTCCAAGTCGTCGTTTTCACCTTTGGGCTCAACGCCGAGAACTCCTCACTCTCTCTCTCTCTCTCTCTCGCTCGCCGGCAATTGAGCATCATGGCAATCCCTGCTGCTTCTGCGGCGGCGAAGGCGAAGGCGACGAGCTCGTCGTCAATGACTTCGACGATCAGAGCCTACTCTCTGCCTCTGATTCTCTTCATCGTCGCCATGTATTTCCAGCTCTCTGTTATTCCCAAATCCTTCCCTCCTTCTCACTACGCCGTTCTTGGTCTGAGGAGTCAGAGCTCCATTGAAGAAGTGAAAGAGGCCTATGACAACGTTTCTTCGACGTGGAATTCAGAAGCGCAAGCTCCGGATTCTCTCGAATTTATAAAGATTCGATATGCTTATGAGTTGCTCACAAATCCATCATGGAAAAGAAACTATGACATTTTTGGCTTTGAGGAGCAAATAGATGTAATTGAGAAGCTCAAAAAGCAATATGCTGGAGAAAGCTTTTCACGGATAGACCTTCCTTTACTAGAGTCTGCTGCTTCTGATTCTGAAGATCATAACCTTCCAGTCATTACCTCTAAGGATTTCCAGACCATGTTTCAGGACAACAAGCCTTGGCTAATTCAGTTGTGCTCATTTGGGAGCAAAAGCTGTGATCAATTTTCTCATGCCTGGAAGAGAATTGCTGGTTTCTTGGATGGTGTGGCAAAAGCTGCTCAGGTAGATCTTGAAGATATTCAGCTAGCAACATATCTTGCTGATAAAAAACCAACCGGACAACCTTTCTTCAGGAATAGCCTTCCTTCTTTTGTCGCTTTTCCCCAGGGATGTAAAAGTGCCAAGTGCGTTATTAGGTATGAAGGAGACCCCTCAATTGATTCAGTTACAGATTGGTTTGCAACAACCATACTCGGTTTACCTCGTATTCTTTACTACTCAAAGGAGTCACTGGGGGAGAAGTTTCTAGCAAAAGTTAGTCTTCATAAGGTAAAAGTCATTTTCTTCTCAAAAACAGGGGAGCGTGCAGCTCCAATTGTACGCCAAGCTGCTAAAAGTTATTGGGCTCATGCTTCTTTTGCATTTGTGCTGTGGCGAGAAGAGGAATCTTCCTTTTGGTTCAATTCGTTTGAAGTTGAATCTGCACCTGCTATAGTGTTTCTGAAAGATCCTGGTGTTAAACCTGTTGTCAATTCACGTCTCTTAGATATCATCGAACAGAATAAAGAGCAAGAGCTTCCTCAGTTGAGGAGTACAACATCTATGCAATTGGGTTGCGATGCCCAAGGGTATTCTCGTGCTGGATACGATACCGTTACTTGGTACTGTGCTGTTGTAGCAGGAAGGCATAGCCCACAACTCAGTCAAATGCGCAGAACCTTGCGCAGGGTTCAAGAAACTTTATCGAATGAAGTTAAGTCGATACCGGCTGATGAAGAACAAACAGCACCAGCAGCACGTGCACTTCAAAGTAAACGACTGACATTTGCTTGGCTTGATGGGGAAGCCCAAAAGAAATATTGTCTCTTCTTCCTCCAATCTGAAACCAGCTATGAAACTTGTGGATCAAGGACAGATATGACCGATGTACCTAAGTTATTTATTATACGCTACAAAAGGAATGTATCAGAAGAGAGTGAGAAGCCAGAGGGAAAGCCTAAAAGCATATGGGATTCACTTCAGGACCAGGAATTAGATCCTGCAGCACAGCTTGTGGCAAAGTACAATGGTTCAGATGAAATTCCAGAGATTACCAAATGGATCTCCCAAATAATCAAGGATGGTGACGCCAGAGACCTTCCTCACTATAGAACAAGAACTCCTCAACTGGTTCCTGATGATTCGGAACCAATATGGTCCAGCAGTATTCAACGTATTCCTTCAACAAAGACGATAAAGCAGAGCATCATTGGCATTTTACGTGGAGTATATGATCGTATGGAAGATCCAAGAATTGGTCCGATCTTGCTTCTGGCAGCACTAATGTCTTTCGGTAACATCTGGCTTCGAAGGAGTCAAGCAACTCCATTGTCAAATCAACCAAATTCCAAGAATAGAAGTAGTCGAAGGAGGAGAGACCGCAGTGGAGCAGCATCTACTCAAGACCTACCTCCTTCTATTACTGATATGGAACCCAGAGATTCTTATGAAATGCCACTATCAGGTTCCGACTCCGATCAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0001671 GO:0001932 GO:0001933 GO:0003674 GO:0003824 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005788 GO:0006457 GO:0006508 GO:0006511 GO:0006807 GO:0006915 GO:0006950 GO:0007154 GO:0007165 GO:0008047 GO:0008150 GO:0008152 GO:0008219 GO:0009056 GO:0009057 GO:0009892 GO:0009987 GO:0010033 GO:0010243 GO:0010498 GO:0010563 GO:0010605 GO:0012501 GO:0012505 GO:0015035 GO:0015036 GO:0016491 GO:0016667 GO:0016671 GO:0019220 GO:0019222 GO:0019538 GO:0019899 GO:0019941 GO:0023052 GO:0030163 GO:0030234 GO:0030433 GO:0030544 GO:0031072 GO:0031323 GO:0031324 GO:0031399 GO:0031400 GO:0031974 GO:0032268 GO:0032269 GO:0032781 GO:0032991 GO:0033554 GO:0034663 GO:0034975 GO:0034976 GO:0035556 GO:0036503 GO:0042221 GO:0042325 GO:0042326 GO:0043085 GO:0043161 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0043462 GO:0043632 GO:0044093 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044422 GO:0044424 GO:0044432 GO:0044444 GO:0044446 GO:0044464 GO:0045936 GO:0048519 GO:0048523 GO:0050789 GO:0050790 GO:0050794 GO:0050896 GO:0051087 GO:0051117 GO:0051171 GO:0051172 GO:0051174 GO:0051246 GO:0051248 GO:0051336 GO:0051345 GO:0051603 GO:0051716 GO:0051787 GO:0055114 GO:0060255 GO:0060589 GO:0060590 GO:0065007 GO:0065009 GO:0070013 GO:0070059 GO:0071704 GO:0080090 GO:0097190 GO:0097193 GO:0098772 GO:1901564 GO:1901565 GO:1901575 GO:1901698
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DnaJ

Protein Analysis

745

Amino Acids

83.82

Weight (kDa)

8.48

Isoelectric Point (pI)

59.34

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DnaJ PF00226 106 - 164 2.7e-07 DnaJ domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 434
AarI CACCTGC 1 cut(s) 1210
AasI GACNNNNNNGTC 1 cut(s) 208
Acc16I TGCGCA 2 cut(s) 1427, 1439
Acc36I ACCTGC 1 cut(s) 1210
AccB7I CCANNNNNTGG 1 cut(s) 2009
AccIII TCCGGA 1 cut(s) 415
AciI CCGC 4 cut(s) 13, 182, 185, 2134
AclI AACGTT 1 cut(s) 381
AclWI GGATC 5 cut(s) 1217, 1627, 1745, 1823, 1994
AcsI RAATTY 4 cut(s) 397, 428, 1794, 2098
AcuI CTGAAG 3 cut(s) 627, 829, 1718
AcvI CACGTG 2 cut(s) 8, 1514
AcyI GRCGYC 1 cut(s) 1842
AfaI GTAC 5 cut(s) 1095, 1309, 1379, 1644, 1778
AfiI CCNNNNNNNGG 4 cut(s) 1374, 1440, 2009, 2216
AflIII ACRYGT 2 cut(s) 5, 7
AgsI TTSAA 9 cut(s) 356, 788, 1177, 1187, 1193, 1448, 1523, 1925, 1938
AjiI CACGTC 2 cut(s) 393, 1253
AjnI CCWGG 4 cut(s) 728, 879, 1225, 1740
AloI GAACNNNNNNTCC 2 cut(s) 1858, 1890
Alw21I GWGCWC 4 cut(s) 209, 350, 692, 1519
Alw26I GTCTC 5 cut(s) 915, 1259, 1583, 1842, 2124
Alw44I GTGCAC 1 cut(s) 1515
AlwI GGATC 5 cut(s) 1217, 1627, 1745, 1823, 1994
Aor13HI TCCGGA 1 cut(s) 415
AoxI GGCC 1 cut(s) 369
ApaLI GTGCAC 1 cut(s) 1515
ApeKI GCWGC 9 cut(s) 173, 593, 770, 1082, 1103, 1508, 1757, 2030, 2144
ApoI RAATTY 4 cut(s) 397, 428, 1794, 2098
Asp700I GAANNNNTTC 1 cut(s) 792
AspLEI GCGC 3 cut(s) 409, 1428, 1440
AspS9I GGNCC 3 cut(s) 1738, 1911, 2012
AsuHPI GGTGA 2 cut(s) 79, 1850
AsuII TTCGAA 1 cut(s) 2062
AsuNHI GCTAGC 1 cut(s) 799
AvaII GGWCC 3 cut(s) 1738, 1911, 2012
BaeGI GKGCMC 1 cut(s) 1519
BaeI ACNNNNGTAYC 2 cut(s) 1626, 1659
BanII GRGCYC 4 cut(s) 99, 209, 350, 1123
BauI CACGAG 1 cut(s) 1350
BbrPI CACGTG 2 cut(s) 8, 1514
BbsI GAAGAC 1 cut(s) 1028
Bbv12I GWGCWC 4 cut(s) 209, 350, 692, 1519
BbvI GCAGC 9 cut(s) 160, 580, 757, 1090, 1094, 1520, 1769, 2042, 2156
BccI CCATC 5 cut(s) 42, 478, 749, 1547, 1829
BceAI ACGGC 1 cut(s) 308
BciT130I CCWGG 4 cut(s) 730, 881, 1227, 1742
BciVI GTATCC 1 cut(s) 1352
BclI TGATCA 1 cut(s) 712
BcoDI GTCTC 5 cut(s) 915, 1259, 1583, 1842, 2124
BfaI CTAG 3 cut(s) 584, 800, 1022
BfmI CTRYAG 3 cut(s) 1206, 1755, 1861
BfuAI ACCTGC 1 cut(s) 1210
BfuI GTATCC 1 cut(s) 1352
BglII AGATCT 1 cut(s) 781
BlpI GCTNAGC 1 cut(s) 40
Bme1390I CCNGG 4 cut(s) 730, 881, 1227, 1742
Bme18I GGWCC 3 cut(s) 1738, 1911, 2012
BmgBI CACGTC 2 cut(s) 393, 1253
BmgT120I GGNCC 3 cut(s) 1738, 1911, 2012
BmiI GGNNCC 4 cut(s) 1887, 1902, 2187, 2221
BmrFI CCNGG 4 cut(s) 730, 881, 1227, 1742
BmrI ACTGGG 1 cut(s) 1016
BmsI GCATC 5 cut(s) 24, 165, 1324, 1968, 2156
BmtI GCTAGC 1 cut(s) 803
BmuI ACTGGG 1 cut(s) 1016
BoxI GACNNNNGTC 1 cut(s) 8
BpiI GAAGAC 1 cut(s) 1028
BplI GAGNNNNNCTC 2 cut(s) 98, 130
BpmI CTGGAG 1 cut(s) 570
Bpu10I CCTNAGC 1 cut(s) 774
Bpu1102I GCTNAGC 1 cut(s) 40
Bpu14I TTCGAA 1 cut(s) 2062
BpuEI CTTGAG 1 cut(s) 2139
BsaAI YACGTR 3 cut(s) 8, 1514, 1976
BsaHI GRCGYC 1 cut(s) 1842
BsaI GGTCTC 3 cut(s) 915, 1842, 2124
BsaJI CCNNGG 4 cut(s) 671, 879, 880, 1339
BsaWI WCCGGW 2 cut(s) 415, 830
BsaXI ACNNNNNCTCC 2 cut(s) 1858, 1888
Bsc4I CCNNNNNNNGG 4 cut(s) 1374, 1440, 2009, 2216
Bse118I RCCGGY 2 cut(s) 144, 1480
Bse1I ACTGG 3 cut(s) 623, 1011, 1887
BseAI TCCGGA 1 cut(s) 415
BseBI CCWGG 4 cut(s) 730, 881, 1227, 1742
BseDI CCNNGG 4 cut(s) 671, 879, 880, 1339
BseGI GGATG 4 cut(s) 15, 760, 890, 1840
BseLI CCNNNNNNNGG 4 cut(s) 1374, 1440, 2009, 2216
BseMII CTCAG 5 cut(s) 54, 326, 788, 1310, 1429
BseNI ACTGG 3 cut(s) 623, 1011, 1887
BseRI GAGGAG 6 cut(s) 103, 352, 521, 1318, 1866, 2140
BseSI GKGCMC 1 cut(s) 1519
BseXI GCAGC 9 cut(s) 160, 580, 757, 1090, 1094, 1520, 1769, 2042, 2156
BsgI GTGCAG 2 cut(s) 1101, 1182
BshFI GGCC 1 cut(s) 371
BsiHKAI GWGCWC 4 cut(s) 209, 350, 692, 1519
BsiSI CCGG 4 cut(s) 145, 416, 831, 1481
BslI CCNNNNNNNGG 4 cut(s) 1374, 1440, 2009, 2216
BsmAI GTCTC 5 cut(s) 915, 1259, 1583, 1842, 2124
BsmBI CGTCTC 1 cut(s) 1259
BsnI GGCC 1 cut(s) 371
Bso31I GGTCTC 3 cut(s) 915, 1842, 2124
Bsp119I TTCGAA 1 cut(s) 2062
Bsp1286I GDGCHC 6 cut(s) 99, 209, 350, 692, 1123, 1519
Bsp13I TCCGGA 1 cut(s) 415
Bsp1720I GCTNAGC 1 cut(s) 40
BspACI CCGC 4 cut(s) 13, 182, 185, 2134
BspANI GGCC 1 cut(s) 371
BspCNI CTCAG 5 cut(s) 53, 327, 787, 1309, 1428
BspEI TCCGGA 1 cut(s) 415
BspLI GGNNCC 4 cut(s) 1887, 1902, 2187, 2221
BspMAI CTGCAG 1 cut(s) 1759
BspMI ACCTGC 1 cut(s) 1210
BspOI GCTAGC 1 cut(s) 803
BspPI GGATC 5 cut(s) 1217, 1627, 1745, 1823, 1994
BspT104I TTCGAA 1 cut(s) 2062
BspTNI GGTCTC 3 cut(s) 915, 1842, 2124
BsrFI RCCGGY 2 cut(s) 144, 1480
BsrI ACTGG 3 cut(s) 623, 1011, 1887
BssAI RCCGGY 2 cut(s) 144, 1480
BssECI CCNNGG 4 cut(s) 671, 879, 880, 1339
BssNI GRCGYC 1 cut(s) 1842
BssSI CACGAG 1 cut(s) 1350
BssT1I CCWWGG 2 cut(s) 671, 1339
Bst2BI CACGAG 1 cut(s) 1350
Bst2UI CCWGG 4 cut(s) 730, 881, 1227, 1742
Bst4CI ACNGT 2 cut(s) 1369, 1382
Bst6I CTCTTC 5 cut(s) 263, 728, 1149, 1586, 1680
BstACI GRCGYC 1 cut(s) 1842
BstAPI GCANNNNNTGC 3 cut(s) 170, 770, 1514
BstBAI YACGTR 3 cut(s) 8, 1514, 1976
BstBI TTCGAA 1 cut(s) 2062
BstC8I GCNNGC 6 cut(s) 67, 142, 146, 411, 801, 1080
BstDEI CTNAG 8 cut(s) 40, 335, 636, 774, 1258, 1296, 1415, 1647
BstENI CCTNNNNNAGG 1 cut(s) 1438
BstF5I GGATG 4 cut(s) 15, 760, 890, 1840
BstHHI GCGC 3 cut(s) 409, 1428, 1440
BstMAI GTCTC 5 cut(s) 915, 1259, 1583, 1842, 2124
BstNI CCWGG 4 cut(s) 730, 881, 1227, 1742
BstPAI GACNNNNGTC 1 cut(s) 8
BstSCI CCNGG 4 cut(s) 728, 879, 1225, 1740
BstSFI CTRYAG 3 cut(s) 1206, 1755, 1861
BstSLI GKGCMC 1 cut(s) 1519
BstV1I GCAGC 9 cut(s) 160, 580, 757, 1090, 1094, 1520, 1769, 2042, 2156
BstV2I GAAGAC 1 cut(s) 1028
BstX2I RGATCY 5 cut(s) 781, 1222, 1750, 1815, 1999
BstYI RGATCY 5 cut(s) 781, 1222, 1750, 1815, 1999
BsuI GTATCC 1 cut(s) 1352
BsuRI GGCC 1 cut(s) 371
BtgZI GCGATG 2 cut(s) 20, 1347
BtrI CACGTC 2 cut(s) 393, 1253
BtsCI GGATG 4 cut(s) 15, 760, 890, 1840
BtsI GCAGTG 1 cut(s) 2143
BtsIMutI CAGTG 2 cut(s) 1004, 2143
BveI ACCTGC 1 cut(s) 1210
Cac8I GCNNGC 6 cut(s) 67, 142, 146, 411, 801, 1080
CfoI GCGC 3 cut(s) 409, 1428, 1440
Cfr10I RCCGGY 2 cut(s) 144, 1480
Cfr13I GGNCC 3 cut(s) 1738, 1911, 2012
CseI GACGC 1 cut(s) 1850
Csp6I GTAC 5 cut(s) 1094, 1308, 1378, 1643, 1777
CviAII CATG 6 cut(s) 160, 271, 474, 652, 725, 1124
CviQI GTAC 5 cut(s) 1094, 1308, 1378, 1643, 1777
DdeI CTNAG 8 cut(s) 40, 335, 636, 774, 1258, 1296, 1415, 1647
DraI TTTAAA 1 cut(s) 54
DrdI GACNNNNNNGTC 1 cut(s) 208
DseDI GACNNNNNNGTC 1 cut(s) 208
Eam1104I CTCTTC 5 cut(s) 263, 728, 1149, 1586, 1680
EarI CTCTTC 5 cut(s) 263, 728, 1149, 1586, 1680
Ecl136II GAGCTC 2 cut(s) 207, 348
Eco130I CCWWGG 2 cut(s) 671, 1339
Eco147I AGGCCT 1 cut(s) 371
Eco24I GRGCYC 4 cut(s) 99, 209, 350, 1123
Eco31I GGTCTC 3 cut(s) 915, 1842, 2124
Eco32I GATATC 1 cut(s) 1264
Eco47I GGWCC 3 cut(s) 1738, 1911, 2012
Eco53kI GAGCTC 2 cut(s) 207, 348
Eco57I CTGAAG 3 cut(s) 627, 829, 1718
Eco72I CACGTG 2 cut(s) 8, 1514
EcoICRI GAGCTC 2 cut(s) 207, 348
EcoNI CCTNNNNNAGG 1 cut(s) 1438
EcoRI GAATTC 1 cut(s) 397
EcoRII CCWGG 4 cut(s) 728, 879, 1225, 1740
EcoRV GATATC 1 cut(s) 1264
EcoT14I CCWWGG 2 cut(s) 671, 1339
EcoT38I GRGCYC 4 cut(s) 99, 209, 350, 1123
ErhI CCWWGG 2 cut(s) 671, 1339
Esp3I CGTCTC 1 cut(s) 1259
FaeI CATG 6 cut(s) 163, 274, 477, 655, 728, 1127
FalI AAGNNNNNCTT 2 cut(s) 1020, 1052
FatI CATG 6 cut(s) 159, 270, 473, 651, 724, 1123
FauNDI CATATG 1 cut(s) 1721
FbaI TGATCA 1 cut(s) 712
FokI GGATG 4 cut(s) 2, 767, 897, 1847
FriOI GRGCYC 4 cut(s) 99, 209, 350, 1123
FspBI CTAG 3 cut(s) 584, 800, 1022
FspI TGCGCA 2 cut(s) 1427, 1439
GlaI GCGC 3 cut(s) 408, 1427, 1439
GsuI CTGGAG 1 cut(s) 570
HaeIII GGCC 1 cut(s) 371
HapII CCGG 4 cut(s) 145, 416, 831, 1481
HgaI GACGC 1 cut(s) 1850
HhaI GCGC 3 cut(s) 409, 1428, 1440
Hin1I GRCGYC 1 cut(s) 1842
Hin1II CATG 6 cut(s) 163, 274, 477, 655, 728, 1127
Hin6I GCGC 3 cut(s) 407, 1426, 1438
HinP1I GCGC 3 cut(s) 407, 1426, 1438
HindIII AAGCTT 1 cut(s) 556
HpaII CCGG 4 cut(s) 145, 416, 831, 1481
HphI GGTGA 2 cut(s) 79, 1850
Hpy166II GTNNAC 3 cut(s) 974, 1517, 1529
Hpy8I GTNNAC 3 cut(s) 974, 1517, 1529
Hpy99I CGWCG 6 cut(s) 83, 205, 214, 229, 269, 394
HpyCH4III ACNGT 2 cut(s) 1369, 1382
HpyCH4IV ACGT 7 cut(s) 7, 381, 392, 1252, 1513, 1927, 1975
HpyCH4V TGCA 7 cut(s) 956, 1082, 1136, 1199, 1321, 1517, 1757
HpyF3I CTNAG 8 cut(s) 40, 335, 636, 774, 1258, 1296, 1415, 1647
HpySE526I ACGT 7 cut(s) 7, 381, 392, 1252, 1513, 1927, 1975
Hsp92I GRCGYC 1 cut(s) 1842
Hsp92II CATG 6 cut(s) 163, 274, 477, 655, 728, 1127
HspAI GCGC 3 cut(s) 407, 1426, 1438
Kpn2I TCCGGA 1 cut(s) 415
KroI GCCGGC 1 cut(s) 144
KroNI GCCGGC 1 cut(s) 146
Ksp22I TGATCA 1 cut(s) 712
LmnI GCTCC 8 cut(s) 49, 353, 418, 508, 699, 1075, 1090, 2141
Lsp1109I GCAGC 9 cut(s) 160, 580, 757, 1090, 1094, 1520, 1769, 2042, 2156
LweI GCATC 5 cut(s) 24, 165, 1324, 1968, 2156
MaeI CTAG 3 cut(s) 584, 800, 1022
MaeII ACGT 7 cut(s) 7, 381, 392, 1252, 1513, 1927, 1975
MaeIII GTNAC 5 cut(s) 940, 1002, 1369, 1838, 2048
MfeI CAATTG 4 cut(s) 149, 930, 1089, 1322
MflI RGATCY 5 cut(s) 781, 1222, 1750, 1815, 1999
MhlI GDGCHC 6 cut(s) 99, 209, 350, 692, 1123, 1519
MlyI GAGTC 5 cut(s) 349, 596, 1010, 2077, 2219
MroI TCCGGA 1 cut(s) 415
MroNI GCCGGC 1 cut(s) 144
MroXI GAANNNNTTC 1 cut(s) 792
MseI TTAA 3 cut(s) 53, 1233, 1470
MspI CCGG 4 cut(s) 145, 416, 831, 1481
MspR9I CCNGG 4 cut(s) 730, 881, 1227, 1742
MunI CAATTG 4 cut(s) 149, 930, 1089, 1322
MvaI CCWGG 4 cut(s) 730, 881, 1227, 1742
NaeI GCCGGC 1 cut(s) 146
NdeI CATATG 1 cut(s) 1721
NgoMIV GCCGGC 1 cut(s) 144
NheI GCTAGC 1 cut(s) 799
NlaIII CATG 6 cut(s) 163, 274, 477, 655, 728, 1127
NlaIV GGNNCC 4 cut(s) 1887, 1902, 2187, 2221
NmeAIII GCCGAG 1 cut(s) 130
NmuCI GTSAC 2 cut(s) 1002, 1838
NsbI TGCGCA 2 cut(s) 1427, 1439
NspV TTCGAA 1 cut(s) 2062
PaqCI CACCTGC 1 cut(s) 1210
PasI CCCWGGG 1 cut(s) 880
PceI AGGCCT 1 cut(s) 371
PcsI WCGNNNNNNNCGW 1 cut(s) 209
PdiI GCCGGC 1 cut(s) 146
PdmI GAANNNNTTC 1 cut(s) 792
PflMI CCANNNNNTGG 1 cut(s) 2009
PleI GAGTC 5 cut(s) 348, 595, 1009, 2076, 2219
PmaCI CACGTG 2 cut(s) 8, 1514
PmlI CACGTG 2 cut(s) 8, 1514
PpsI GAGTC 5 cut(s) 348, 595, 1009, 2076, 2219
Ppu21I YACGTR 3 cut(s) 8, 1514, 1976
PshAI GACNNNNGTC 1 cut(s) 8
PsiI TTATAA 1 cut(s) 434
Psp124BI GAGCTC 2 cut(s) 209, 350
Psp1406I AACGTT 1 cut(s) 381
Psp6I CCWGG 4 cut(s) 728, 879, 1225, 1740
PspCI CACGTG 2 cut(s) 8, 1514
PspGI CCWGG 4 cut(s) 728, 879, 1225, 1740
PspN4I GGNNCC 4 cut(s) 1887, 1902, 2187, 2221
PspPI GGNCC 3 cut(s) 1738, 1911, 2012
PstI CTGCAG 1 cut(s) 1759
PsuI RGATCY 5 cut(s) 781, 1222, 1750, 1815, 1999
RsaI GTAC 5 cut(s) 1095, 1309, 1379, 1644, 1778
RsaNI GTAC 5 cut(s) 1094, 1308, 1378, 1643, 1777
SacI GAGCTC 2 cut(s) 209, 350
SaqAI TTAA 3 cut(s) 53, 1233, 1470
Sau96I GGNCC 3 cut(s) 1738, 1911, 2012
SchI GAGTC 5 cut(s) 349, 596, 1010, 2077, 2219
ScrFI CCNGG 4 cut(s) 730, 881, 1227, 1742
SduI GDGCHC 6 cut(s) 99, 209, 350, 692, 1123, 1519
SfaNI GCATC 5 cut(s) 24, 165, 1324, 1968, 2156
SfcI CTRYAG 3 cut(s) 1206, 1755, 1861
SfuI TTCGAA 1 cut(s) 2062
SinI GGWCC 3 cut(s) 1738, 1911, 2012
SmlI CTYRAG 1 cut(s) 2154
SmoI CTYRAG 1 cut(s) 2154
SseBI AGGCCT 1 cut(s) 371
SsiI CCGC 4 cut(s) 13, 182, 185, 2134
SspI AATATT 1 cut(s) 1574
SspMI CTAG 3 cut(s) 584, 800, 1022
SstI GAGCTC 2 cut(s) 209, 350
StuI AGGCCT 1 cut(s) 371
StyD4I CCNGG 4 cut(s) 728, 879, 1225, 1740
StyI CCWWGG 2 cut(s) 671, 1339
TaaI ACNGT 2 cut(s) 1369, 1382
TaiI ACGT 7 cut(s) 10, 384, 395, 1255, 1516, 1930, 1978
TaqI TCGA 9 cut(s) 224, 389, 426, 442, 1269, 1460, 1475, 2062, 2119
TaqII GACCGA 1 cut(s) 1652
TatI WGTACW 2 cut(s) 1307, 1776
TauI GCSGC 2 cut(s) 185, 188
Tru1I TTAA 3 cut(s) 53, 1233, 1470
Tru9I TTAA 3 cut(s) 53, 1233, 1470
TscAI CASTG 2 cut(s) 1011, 2143
TseFI GTSAC 2 cut(s) 1002, 1838
TseI GCWGC 9 cut(s) 173, 593, 770, 1082, 1103, 1508, 1757, 2030, 2144
Tsp45I GTSAC 2 cut(s) 1002, 1838
TspDTI ATGAA 8 cut(s) 250, 930, 1028, 1479, 1503, 1623, 1806, 2217
TspGWI ACGGA 1 cut(s) 580
TspRI CASTG 2 cut(s) 1011, 2143
Van91I CCANNNNNTGG 1 cut(s) 2009
VneI GTGCAC 1 cut(s) 1515
VpaK11BI GGWCC 3 cut(s) 1738, 1911, 2012
XagI CCTNNNNNAGG 1 cut(s) 1438
XapI RAATTY 4 cut(s) 397, 428, 1794, 2098
XmnI GAANNNNTTC 1 cut(s) 792
XspI CTAG 3 cut(s) 584, 800, 1022
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.