Basic Information

Type: gene

Biological Identity

Species

fragaria_vesca

Chromosome

Fvb5

Orthogroup ID

OG0008770

Physical Location & Seq

Genomic Coordinates Reverse (-)

8922375 .. 8928758

Gene Structure 6384 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

FvH4_5g15780.t3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3750 bp

ATGGGCGGCGACCGTCACCACCACAGCCGGATGCCGGAGAGTTCGTCTTCGTCATGTTCAGAGCTCGCGCAATCGCCGATTCTGTTGCTGGTTTGCTTCCACAAGGCGATGCGAGCCGAGCTCGCCGATCTCCTCCACGTCACCACGGCCGCCTTGAACGGTGGATTCAGAGGCCGCGGCTTTGTTCTCGAGGTTTTGCGAAGGTTTGAGTTCCTCAAGCTCGCGTATAAGTATCACTGCTCTGCTGAAGACGAGGTTATTTTTCTAGCGCTAGATGGACGAACAAAAAACATAGCTTGTACATATTCATTGGAGCATAGGAGTATAGACGGTCTTTTCGATTCTATTTTTAGTCGCTTGGATGTATTGTTAGAGGAAAGTGAAGACATTTCAAAGGAATTTCAGGAACTTGTGTTCTGCATTGGGACGCTCCAGGCATTCATTTGCCAGCATATGGTGAAAGAAGAAGAACAGGTTTTTCCTCTGCTCCTGCAGCAATTTTCTCCGAAGGAGCAGGCTTCACTTGTGTGGCAGTACATGTGTAGTATTCCTGTAGTGCTGCTAGAGGATCTTCTACCATGGATGATCTCCTCTCTTCAAAATGATGAAGAAGAGGAAGTCATCCGTTGCATAAAAGAAATCGTACCTGATGAAAAACATCTCCAAGAGGTAGTAAGCTCGTGGCTTGCTAACAACGGCCAGGCTCGACACACCGGTGATGATGAATCTGCAGATATGAAAAAGTTACTCAAGTCTCATTCCCCTAAGAGGTTCTTTGAAGAAAGTTGGAGTCGCATGAAGAAACAAACCATCCATACTGATACTGGATACAATCCTGTTGATGGCCTTCATCTTTGGCATCGTGCCATTAGGAAAGATTTAGAAAAATCTTTGGGAGAGCTATATCAATTGAGAAGCTCAATCAATTTCCTGAATATTGACTCAATAGTTGTCCAGCTAAAGTTTCTTGCTGATGTCCTCACTTTTTACAGCAATGCATTGGAGAAGTTATTTCATCCTGTGTTAAATGAACTTGTCAATGGCTGTCTGTACCCCTCTATTGAGAAATTTCCCGATGAAAGTCTTCTGGAAAGTTTGCGTAATTTACTGTACTATAGCCTTGAGAATGGAACACCTTTGGGCAAATTTGTTGAAAAGCTTTGCCGAGAATTTGAGTGTCTTGTGGTGGGAGTCAGCAAGCATTTTGCTTTTCACGAAACAGAGGTATTTCCCATTATAAAGAAGAACTGTAGCCATGAAATGCAACAGCAACTCGTGTATGTCAGCCTTCATATTATGCCACTTGGGTTGCTGAAGTGTGTGACTACTTGGTTTTCAGCTTGCTTATCTGAGGATGACTCCAGGTCAATTCTTAGCAGCATGAAGCAACGAGATTTCTTAGTTGATGATTCTTTTGTATCTCTGTTACATGAGTGGTTCCGTATTGGCCATTCAGGTAAAACCTCAACTGAAAATTTCCGAGAGGACTTGCAGCAAATATTTAAGAGCAGATGCACTTTCTTATGCAACCAGTTGCATTCCAGTACTGCATTTTCATCTGTAAGCTCCAGTATGCAACATCGAGGGAAACCAAACACTGGGGTAATGGAACTAATTTCTTCAAACATGGCAAAGAACTCTATGCCATACTCTTCATCTTTTGCCTCTGACTCTGCTTCATATTCCGAGACTTCAAACTCAAGAGAAATTAATCTCCAAGTGTATTTCTCTGGAATGAGAACATCATATCATATTGGTGAAAGTCTTGGTGGGGAAAAATTGAGTGGTTACGGTCTCCATGAACCAAAACCAATAGATCTTATATTTTTCTTCCACAAGGCTCTCAAGAAGGATTTGGAATACCTTGTCCTTGGTTCAGCTGAATTGGCCAAAAATGCAGCTTTCCTCACAGATTTCTGCCGGCGCTTTAGTCTCTTGCAGTTCTTACATCAAATACATAGTGAAGCAGAGGACGAGGTTGCCTTTCCAGCCTTGGAGGCAAAGGGGAAATGTCAAAACATTAGCCAGTCTTACACGATAGACCACAAGCTAGAGGTTGAACGCTTCCAAAAAATATCCCTCATTCTAGATGAGATGTCCAAATTGTATTTTTCAGTTTCTATGTTTGATTCAAACACAATGGACCAGATGTCGCCAAAGCTCTATCAGTTGTGCATGAGGCTTCATGGTATGTGCAAATCTATGTGCAAACTACTGACTGACCATATTAATCGTGAAGAAGTTGAACTTTGGCCCTTGTTTAAAGAATGCTTCTCCATTGAAGAGCAAGAAAGGATCGTGGCATGCATACTTGGTAGAACAGAAGCAAAAGTATTACAAGATATGATACCCTGGCTGATGGAATCTTTGACGCCAGAAGAACAGCATGCCATGATATCTATATGGCGCCAGGTCACAAGAAACACAATGTTTGATGAGTGGTTGAAAGAATGGTGGGAGGGGTATGATGCGGGCAAGGTGGTGGAGGAGTCATGTGTTCCTCCTTCAAAGACTGTAGATCCCTTGGAAGTTGTCTCTATGTGCTTGTGTGGACTGGATGAACAAGGAAGGTGTGTCTGCAACAGAAGCATCAAATTTTCCGAAAAAGATTCCCCTGATAATGATACTAAGCTTTTAAGAATCACTGAGGTGAATCATAAGCTGAGGGATGCTGATAGACACCAATGTAATTACAACCATACAGATTCTGTAATTCTTGCAGAAGGTAAGAAGATGAAATATGAAGACACTGAAAATGCCATAGAACAAAACAATGATCCAGGACAACTTTTTCAAGCAAGTCGTAAAACGGATTGTTGCGAGTGCCTGCGGACACTAAGTCAAGAGGATCTGTTGACTGCAATAAGTAAAATCTCCCGCAACTCTTCCTTGGATCCTCAGAAGAAACCATATATGATGCAGAACCTGCTATCAAGCCATTGGAGAGTCAAACAACGCTCTCAGTTAATTGCAAGTAATGGGAAAGAATTCCCTCGTCAGCATCCATCCTATCAGGACCCTTTTGGGCAAACATTTGGTTGTAAACACTATAAGAGGAACTGTAAGCTTGTTGCTGCATGTTGCAACCAGCTCTACACTTGCATACGCTGCCATGATGAGATAGCAGAGCACACGATAGATAGGAGATCTGTAACAGAGATGATGTGCATGAAATGCTTGAAAATTCAGCCAATCGGGCCCACATGCTCAACTGCATCCTGCAGTGATTTATCCATGGCAAGATACTTTTGCAAAATTTGCAAGATTTTTGATGATGAAAGGATTATCTACCATTGCCCTTACTGTAACTTGTGTCGAGTTGGAAAGGGATTGGGTATTGACTACTTCCATTGCATGACTTGTAATGCTTGCATGTCCCGTTCTCTCTTCAAGCATACATGCAGAGAGAAAAGCTTTATGATTAATTGCCCTATTTGCCATGAAGACATCTTCACGAGCAACTCTCCAGTAAAGGCCCTTCCATGTGGTCATTCAATGCACTCGACATGTTTTCAGGCCTACACTTTCACCAAGTATACCTGCCCAATCTGCGGCAAGTCACTTGGGGACATGCAGATGTTATTTAGAATGTATGATGCATATTTAGCTGGAGAGAAACTCCCAGATGAGTATTCTGGCCGAACTCAGGCCATACTATGCAATGACTGTGAGAAGAAAGGAACTGCTCCCTTTCATTGGCTTTACCACAAGTGCTCCTCTTGTGGTTCATACAATACCAGGCTTCTATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004842 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006464 GO:0006508 GO:0006511 GO:0006807 GO:0006873 GO:0006875 GO:0006879 GO:0006950 GO:0007154 GO:0008150 GO:0008152 GO:0008270 GO:0009056 GO:0009057 GO:0009267 GO:0009605 GO:0009987 GO:0009991 GO:0010106 GO:0010498 GO:0016567 GO:0016740 GO:0019538 GO:0019725 GO:0019787 GO:0019941 GO:0030003 GO:0030163 GO:0031667 GO:0031668 GO:0031669 GO:0032446 GO:0033554 GO:0036211 GO:0042592 GO:0042594 GO:0043161 GO:0043167 GO:0043169 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044424 GO:0044464 GO:0046872 GO:0046914 GO:0046916 GO:0048878 GO:0050801 GO:0050896 GO:0051603 GO:0051716 GO:0055065 GO:0055072 GO:0055076 GO:0055080 GO:0055082 GO:0061630 GO:0061659 GO:0065007 GO:0065008 GO:0070647 GO:0071496 GO:0071704 GO:0098771 GO:0140096 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Hemerythrin zf-CHY zf-RING_2 zinc_ribbon_6

Protein Analysis

1250

Amino Acids

143.45

Weight (kDa)

6.14

Isoelectric Point (pI)

51.35

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
zf-CHY	PF05495	863 - 931	1.5e-17	CHY zinc finger

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0008770)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G18910 AT1G74770 AT1G74770
fragaria_vesca	FvH4_5g15780 FvH4_5g15780 FvH4_5g15780
malus_domestica	MD14G1191800.v1.1
prunus_persica	Prupe.1G314300_v2.0.a1 Prupe.5G184400_v2.0.a1 Prupe.5G184400_v2.0.a1
pyrus_communis	pycom14g15950
rosa_chinensis	RchiOBHm_Chr7g0180341
rosa_laevigata	RLG00000005275
rosa_multiflora	Rmu_sc0003526.1_g000012 Rmu_ssc0000099.1_g000006
rosa_roxburghii	Rroxscaffold_3G00244490 Rroxscaffold_3G00272970
rosa_rugosa	Rorug06G0432400
rosa_samantha	Rh7AG032800 Rh7BG032800 Rh7CG034700 Rh7DG033400
rosa_wichuraiana	Rw7G002740

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1238
Acc36I	ACCTGC	2 cut(s)	2934, 3548
AccB1I	GGYRCC	1 cut(s)	2406
AccB7I	CCANNNNNTGG	2 cut(s)	454, 1598
AccI	GTMKAC	1 cut(s)	3536
AccII	CGCG	3 cut(s)	68, 177, 224
AciI	CCGC	8 cut(s)	6, 150, 175, 177, 2471, 2830, 2878, 3552
AclWI	GGATC	7 cut(s)	576, 2303, 2513, 2771, 2856, 2888, 2901
AcoI	YGGCCR	5 cut(s)	147, 697, 1447, 1887, 3637
AcsI	RAATTY	9 cut(s)	398, 1067, 1145, 1169, 1474, 2594, 2987, 3183, 3255
AcuI	CTGAAG	2 cut(s)	267, 1334
AcyI	GRCGYC	2 cut(s)	2372, 2407
AfaI	GTAC	6 cut(s)	301, 536, 645, 1052, 1112, 1546
AfeI	AGCGCT	1 cut(s)	270
AfiI	CCNNNNNNNGG	8 cut(s)	34, 454, 768, 842, 1598, 3551, 3646, 3696
AflIII	ACRYGT	2 cut(s)	537, 3506
AgeI	ACCGGT	1 cut(s)	713
AhdI	GACNNNNNGTC	3 cut(s)	1363, 2149, 2838
AjiI	CACGTC	1 cut(s)	139
AjnI	CCWGG	7 cut(s)	432, 699, 1361, 2351, 2409, 2779, 3737
AleI	CACNNNNGTG	3 cut(s)	526, 714, 2648
AloI	GAACNNNNNNTCC	2 cut(s)	398, 430
Alw21I	GWGCWC	4 cut(s)	66, 123, 3132, 3716
Alw26I	GTCTC	5 cut(s)	759, 1682, 1799, 1937, 2539
AlwI	GGATC	7 cut(s)	576, 2303, 2513, 2771, 2856, 2888, 2901
AlwNI	CAGNNNCTG	2 cut(s)	2708, 2926
Ama87I	CYCGRG	1 cut(s)	188
Aor51HI	AGCGCT	1 cut(s)	270
ApaI	GGGCCC	1 cut(s)	3201
ApeKI	GCWGC	7 cut(s)	493, 559, 1377, 1492, 1898, 3074, 3108
ApoI	RAATTY	9 cut(s)	398, 1067, 1145, 1169, 1474, 2594, 2987, 3183, 3255
ArsI	GACNNNNNNTTYG	2 cut(s)	320, 352
AseI	ATTAAT	3 cut(s)	1710, 2229, 3423
AsiGI	ACCGGT	1 cut(s)	713
Asp700I	GAANNNNTTC	2 cut(s)	1083, 2987
AspLEI	GCGC	4 cut(s)	70, 271, 1926, 2409
AspS9I	GGNCC	6 cut(s)	2143, 2253, 3016, 3197, 3198, 3475
AsuHPI	GGTGA	7 cut(s)	8, 133, 469, 728, 1769, 2662, 3520
AvaI	CYCGRG	1 cut(s)	188
AvaII	GGWCC	2 cut(s)	2143, 3016
BaeGI	GKGCMC	1 cut(s)	3201
BalI	TGGCCA	2 cut(s)	1449, 1889
BamHI	GGATCC	1 cut(s)	2893
BanI	GGYRCC	1 cut(s)	2406
BanII	GRGCYC	3 cut(s)	66, 123, 3201
BarI	GAAGNNNNNNTAC	2 cut(s)	3462, 3494
BauI	CACGAG	3 cut(s)	679, 1274, 3454
BbsI	GAAGAC	6 cut(s)	39, 255, 390, 1076, 2751, 3450
Bbv12I	GWGCWC	4 cut(s)	66, 123, 3132, 3716
BbvCI	CCTCAGC	1 cut(s)	2663
BbvI	GCAGC	7 cut(s)	505, 546, 1389, 1504, 1910, 3061, 3095
BccI	CCATC	5 cut(s)	269, 818, 836, 2353, 3013
BceAI	ACGGC	2 cut(s)	162, 712
BcgI	CGANNNNNNTGC	2 cut(s)	67, 101
BciT130I	CCWGG	7 cut(s)	434, 701, 1363, 2353, 2411, 2781, 3739
BciVI	GTATCC	1 cut(s)	821
BcoDI	GTCTC	5 cut(s)	759, 1682, 1799, 1937, 2539
BfaI	CTAG	5 cut(s)	266, 272, 563, 2051, 2087
BfmI	CTRYAG	7 cut(s)	491, 552, 729, 1114, 1249, 2514, 3220
BfoI	RGCGCY	3 cut(s)	272, 1927, 2410
BfuAI	ACCTGC	2 cut(s)	2934, 3548
BfuI	GTATCC	1 cut(s)	821
BglI	GCCNNNNNGGC	2 cut(s)	1997, 3196
BglII	AGATCT	2 cut(s)	1816, 3146
BmcAI	AGTACT	1 cut(s)	1546
Bme1390I	CCNGG	7 cut(s)	434, 701, 1363, 2353, 2411, 2781, 3739
Bme18I	GGWCC	2 cut(s)	2143, 3016
BmeRI	GACNNNNNGTC	3 cut(s)	1363, 2149, 2838
BmeT110I	CYCGRG	1 cut(s)	188
BmgBI	CACGTC	1 cut(s)	139
BmgT120I	GGNCC	6 cut(s)	2143, 2253, 3016, 3197, 3198, 3475
BmiI	GGNNCC	5 cut(s)	1439, 2408, 2895, 3018, 3199
BmrFI	CCNGG	7 cut(s)	434, 701, 1363, 2353, 2411, 2781, 3739
BmrI	ACTGGG	1 cut(s)	1608
BmuI	ACTGGG	1 cut(s)	1608
BpiI	GAAGAC	6 cut(s)	39, 255, 390, 1076, 2751, 3450
BplI	GAGNNNNNCTC	8 cut(s)	105, 137, 1343, 1375, 3448, 3480, 3603, 3635
BpmI	CTGGAG	5 cut(s)	416, 1345, 1552, 3450, 3630
Bpu10I	CCTNAGC	1 cut(s)	2663
BpuEI	CTTGAG	5 cut(s)	200, 734, 1142, 1684, 1829
BsaHI	GRCGYC	2 cut(s)	2372, 2407
BsaI	GGTCTC	1 cut(s)	1799
BsaJI	CCNNGG	9 cut(s)	144, 175, 578, 1870, 1992, 2351, 2523, 2889, 3234
BsaWI	WCCGGW	1 cut(s)	713
BsaXI	ACNNNNNCTCC	4 cut(s)	29, 59, 3698, 3728
Bsc4I	CCNNNNNNNGG	8 cut(s)	34, 454, 768, 842, 1598, 3551, 3646, 3696
Bse118I	RCCGGY	2 cut(s)	713, 1920
Bse1I	ACTGG	8 cut(s)	829, 1531, 1542, 1569, 1603, 2026, 2559, 3467
Bse3DI	GCAATG	4 cut(s)	1000, 3292, 3349, 3667
BseBI	CCWGG	7 cut(s)	434, 701, 1363, 2353, 2411, 2781, 3739
BseDI	CCNNGG	9 cut(s)	144, 175, 578, 1870, 1992, 2351, 2523, 2889, 3234
BseLI	CCNNNNNNNGG	8 cut(s)	34, 454, 768, 842, 1598, 3551, 3646, 3696
BseMI	GCAATG	4 cut(s)	1000, 3292, 3349, 3667
BseMII	CTCAG	6 cut(s)	1341, 2637, 2654, 2912, 2975, 3659
BseNI	ACTGG	8 cut(s)	829, 1531, 1542, 1569, 1603, 2026, 2559, 3467
BseRI	GAGGAG	4 cut(s)	122, 580, 2501, 3706
BseSI	GKGCMC	1 cut(s)	3201
BseX3I	CGGCCG	1 cut(s)	147
BseXI	GCAGC	7 cut(s)	505, 546, 1389, 1504, 1910, 3061, 3095
Bsh1236I	CGCG	3 cut(s)	68, 177, 224
Bsh1285I	CGRYCG	2 cut(s)	13, 150
BshNI	GGYRCC	1 cut(s)	2406
BshTI	ACCGGT	1 cut(s)	713
BsiEI	CGRYCG	2 cut(s)	13, 150
BsiHKAI	GWGCWC	4 cut(s)	66, 123, 3132, 3716
BsiHKCI	CYCGRG	1 cut(s)	188
BsiSI	CCGG	4 cut(s)	28, 35, 714, 1921
BslFI	GGGAC	3 cut(s)	439, 3361, 3581
BslI	CCNNNNNNNGG	8 cut(s)	34, 454, 768, 842, 1598, 3551, 3646, 3696
BsmAI	GTCTC	5 cut(s)	759, 1682, 1799, 1937, 2539
BsmFI	GGGAC	3 cut(s)	439, 3361, 3581
BsmI	GAATGC	3 cut(s)	437, 1537, 2273
Bso31I	GGTCTC	1 cut(s)	1799
BsoBI	CYCGRG	1 cut(s)	188
Bsp120I	GGGCCC	1 cut(s)	3197
Bsp1286I	GDGCHC	5 cut(s)	66, 123, 3132, 3201, 3716
Bsp1407I	TGTACA	1 cut(s)	299
Bsp19I	CCATGG	2 cut(s)	578, 3234
BspACI	CCGC	8 cut(s)	6, 150, 175, 177, 2471, 2830, 2878, 3552
BspCNI	CTCAG	6 cut(s)	1342, 2638, 2655, 2911, 2974, 3658
BspFNI	CGCG	3 cut(s)	68, 177, 224
BspLI	GGNNCC	5 cut(s)	1439, 2408, 2895, 3018, 3199
BspMAI	CTGCAG	3 cut(s)	495, 733, 3224
BspMI	ACCTGC	2 cut(s)	2934, 3548
BspPI	GGATC	7 cut(s)	576, 2303, 2513, 2771, 2856, 2888, 2901
BspQI	GCTCTTC	1 cut(s)	2277
BspT107I	GGYRCC	1 cut(s)	2406
BspTNI	GGTCTC	1 cut(s)	1799
BsrDI	GCAATG	4 cut(s)	1000, 3292, 3349, 3667
BsrFI	RCCGGY	2 cut(s)	713, 1920
BsrGI	TGTACA	1 cut(s)	299
BsrI	ACTGG	8 cut(s)	829, 1531, 1542, 1569, 1603, 2026, 2559, 3467
BssAI	RCCGGY	2 cut(s)	713, 1920
BssECI	CCNNGG	9 cut(s)	144, 175, 578, 1870, 1992, 2351, 2523, 2889, 3234
BssNAI	GTATAC	1 cut(s)	3537
BssNI	GRCGYC	2 cut(s)	2372, 2407
BssSI	CACGAG	3 cut(s)	679, 1274, 3454
BssT1I	CCWWGG	6 cut(s)	578, 1870, 1992, 2523, 2889, 3234
Bst1107I	GTATAC	1 cut(s)	3537
Bst2BI	CACGAG	3 cut(s)	679, 1274, 3454
Bst2UI	CCWGG	7 cut(s)	434, 701, 1363, 2353, 2411, 2781, 3739
Bst6I	CTCTTC	6 cut(s)	600, 606, 1657, 2277, 2890, 3392
BstACI	GRCGYC	2 cut(s)	2372, 2407
BstAPI	GCANNNNNTGC	4 cut(s)	2926, 3108, 3174, 3258
BstAUI	TGTACA	1 cut(s)	299
BstDSI	CCRYGG	4 cut(s)	144, 175, 578, 3234
BstFNI	CGCG	3 cut(s)	68, 177, 224
BstH2I	RGCGCY	3 cut(s)	272, 1927, 2410
BstHHI	GCGC	4 cut(s)	70, 271, 1926, 2409
BstMAI	GTCTC	5 cut(s)	759, 1682, 1799, 1937, 2539
BstMCI	CGRYCG	2 cut(s)	13, 150
BstNI	CCWGG	7 cut(s)	434, 701, 1363, 2353, 2411, 2781, 3739
BstNSI	RCATGY	9 cut(s)	541, 2307, 2390, 3081, 3207, 3376, 3402, 3510, 3574
BstSCI	CCNGG	7 cut(s)	432, 699, 1361, 2351, 2409, 2779, 3737
BstSFI	CTRYAG	7 cut(s)	491, 552, 729, 1114, 1249, 2514, 3220
BstSLI	GKGCMC	1 cut(s)	3201
BstUI	CGCG	3 cut(s)	68, 177, 224
BstV1I	GCAGC	7 cut(s)	505, 546, 1389, 1504, 1910, 3061, 3095
BstV2I	GAAGAC	6 cut(s)	39, 255, 390, 1076, 2751, 3450
BstX2I	RGATCY	6 cut(s)	568, 1816, 2518, 2848, 2893, 3146
BstYI	RGATCY	6 cut(s)	568, 1816, 2518, 2848, 2893, 3146
BstZ17I	GTATAC	1 cut(s)	3537
BstZI	CGGCCG	1 cut(s)	147
BsuI	GTATCC	1 cut(s)	821
BtgI	CCRYGG	4 cut(s)	144, 175, 578, 3234
BtgZI	GCGATG	1 cut(s)	122
BtrI	CACGTC	1 cut(s)	139
BtsI	GCAGTG	2 cut(s)	235, 3229
BtsIMutI	CAGTG	5 cut(s)	235, 1596, 2643, 2748, 3229
BveI	ACCTGC	2 cut(s)	2934, 3548
CaiI	CAGNNNCTG	2 cut(s)	2708, 2926
CfoI	GCGC	4 cut(s)	70, 271, 1926, 2409
Cfr10I	RCCGGY	2 cut(s)	713, 1920
Cfr13I	GGNCC	6 cut(s)	2143, 2253, 3016, 3197, 3198, 3475
Cfr42I	CCGCGG	1 cut(s)	178
CseI	GACGC	2 cut(s)	436, 2380
Csp6I	GTAC	6 cut(s)	300, 535, 644, 1051, 1111, 1545
CspAI	ACCGGT	1 cut(s)	713
CspCI	CAANNNNNGTGG	2 cut(s)	1290, 1325
CviQI	GTAC	6 cut(s)	300, 535, 644, 1051, 1111, 1545
DinI	GGCGCC	1 cut(s)	2408
DraI	TTTAAA	1 cut(s)	2263
DriI	GACNNNNNGTC	3 cut(s)	1363, 2149, 2838
EaeI	YGGCCR	5 cut(s)	147, 697, 1447, 1887, 3637
EagI	CGGCCG	1 cut(s)	147
Eam1104I	CTCTTC	6 cut(s)	600, 606, 1657, 2277, 2890, 3392
Eam1105I	GACNNNNNGTC	3 cut(s)	1363, 2149, 2838
EarI	CTCTTC	6 cut(s)	600, 606, 1657, 2277, 2890, 3392
Ecl136II	GAGCTC	2 cut(s)	64, 121
EclXI	CGGCCG	1 cut(s)	147
Eco130I	CCWWGG	6 cut(s)	578, 1870, 1992, 2523, 2889, 3234
Eco147I	AGGCCT	1 cut(s)	3518
Eco24I	GRGCYC	3 cut(s)	66, 123, 3201
Eco31I	GGTCTC	1 cut(s)	1799
Eco32I	GATATC	1 cut(s)	2397
Eco47I	GGWCC	2 cut(s)	2143, 3016
Eco47III	AGCGCT	1 cut(s)	270
Eco52I	CGGCCG	1 cut(s)	147
Eco53kI	GAGCTC	2 cut(s)	64, 121
Eco57I	CTGAAG	2 cut(s)	267, 1334
Eco88I	CYCGRG	1 cut(s)	188
EcoICRI	GAGCTC	2 cut(s)	64, 121
EcoO109I	RGGNCCY	2 cut(s)	3016, 3475
EcoRI	GAATTC	1 cut(s)	2987
EcoRII	CCWGG	7 cut(s)	432, 699, 1361, 2351, 2409, 2779, 3737
EcoRV	GATATC	1 cut(s)	2397
EcoT14I	CCWWGG	6 cut(s)	578, 1870, 1992, 2523, 2889, 3234
EcoT22I	ATGCAT	3 cut(s)	1000, 2309, 3601
EcoT38I	GRGCYC	3 cut(s)	66, 123, 3201
EgeI	GGCGCC	1 cut(s)	2408
EheI	GGCGCC	1 cut(s)	2408
ErhI	CCWWGG	6 cut(s)	578, 1870, 1992, 2523, 2889, 3234
FalI	AAGNNNNNCTT	4 cut(s)	758, 790, 2232, 2264
FaqI	GGGAC	3 cut(s)	439, 3361, 3581
FauI	CCCGC	2 cut(s)	2464, 2885
FauNDI	CATATG	1 cut(s)	453
FblI	GTMKAC	1 cut(s)	3536
FriOI	GRGCYC	3 cut(s)	66, 123, 3201
FspBI	CTAG	5 cut(s)	266, 272, 563, 2051, 2087
GlaI	GCGC	4 cut(s)	69, 270, 1925, 2408
GsuI	CTGGAG	5 cut(s)	416, 1345, 1552, 3450, 3630
HaeII	RGCGCY	3 cut(s)	272, 1927, 2410
HapII	CCGG	4 cut(s)	28, 35, 714, 1921
HgaI	GACGC	2 cut(s)	436, 2380
HhaI	GCGC	4 cut(s)	70, 271, 1926, 2409
Hin1I	GRCGYC	2 cut(s)	2372, 2407
Hin6I	GCGC	4 cut(s)	68, 269, 1924, 2407
HinP1I	GCGC	4 cut(s)	68, 269, 1924, 2407
HincII	GTYRAC	1 cut(s)	2856
HindII	GTYRAC	1 cut(s)	2856
HindIII	AAGCTT	4 cut(s)	1157, 2630, 3065, 3412
HpaII	CCGG	4 cut(s)	28, 35, 714, 1921
HphI	GGTGA	7 cut(s)	8, 133, 469, 728, 1769, 2662, 3520
Hpy166II	GTNNAC	4 cut(s)	2552, 2856, 3044, 3537
Hpy188I	TCNGA	9 cut(s)	61, 170, 507, 1351, 1481, 1669, 1687, 2602, 2901
Hpy8I	GTNNAC	4 cut(s)	2552, 2856, 3044, 3537
HpyAV	CCTTC	9 cut(s)	195, 502, 857, 1298, 1843, 2514, 2562, 2717, 3488
HpyCH4IV	ACGT	1 cut(s)	138
HpySE526I	ACGT	1 cut(s)	138
Hsp92I	GRCGYC	2 cut(s)	2372, 2407
HspAI	GCGC	4 cut(s)	68, 269, 1924, 2407
KasI	GGCGCC	1 cut(s)	2406
KroI	GCCGGC	1 cut(s)	1920
KroNI	GCCGGC	1 cut(s)	1922
KspI	CCGCGG	1 cut(s)	178
LguI	GCTCTTC	1 cut(s)	2277
LmnI	GCTCC	7 cut(s)	313, 435, 492, 511, 1571, 3691, 3719
Lsp1109I	GCAGC	7 cut(s)	505, 546, 1389, 1504, 1910, 3061, 3095
MaeI	CTAG	5 cut(s)	266, 272, 563, 2051, 2087
MaeII	ACGT	1 cut(s)	138
MfeI	CAATTG	1 cut(s)	908
MflI	RGATCY	6 cut(s)	568, 1816, 2518, 2848, 2893, 3146
MhlI	GDGCHC	5 cut(s)	66, 123, 3132, 3201, 3716
MlsI	TGGCCA	2 cut(s)	1449, 1889
MluNI	TGGCCA	2 cut(s)	1449, 1889
Mly113I	GGCGCC	1 cut(s)	2407
MlyI	GAGTC	7 cut(s)	799, 935, 1200, 1352, 1664, 2498, 2955
MmeI	TCCRAC	2 cut(s)	767, 3301
Mox20I	TGGCCA	2 cut(s)	1449, 1889
Mph1103I	ATGCAT	3 cut(s)	1000, 2309, 3601
MroNI	GCCGGC	1 cut(s)	1920
MroXI	GAANNNNTTC	2 cut(s)	1083, 2987
MscI	TGGCCA	2 cut(s)	1449, 1889
MseI	TTAA	8 cut(s)	1025, 1503, 1710, 2229, 2262, 2636, 2966, 3423
MslI	CAYNNNNRTG	5 cut(s)	526, 714, 1755, 2648, 3575
Msp20I	TGGCCA	2 cut(s)	1449, 1889
MspA1I	CMGCKG	2 cut(s)	177, 1880
MspI	CCGG	4 cut(s)	28, 35, 714, 1921
MspR9I	CCNGG	7 cut(s)	434, 701, 1363, 2353, 2411, 2781, 3739
MunI	CAATTG	1 cut(s)	908
Mva1269I	GAATGC	3 cut(s)	437, 1537, 2273
MvaI	CCWGG	7 cut(s)	434, 701, 1363, 2353, 2411, 2781, 3739
MvnI	CGCG	3 cut(s)	68, 177, 224
NaeI	GCCGGC	1 cut(s)	1922
NarI	GGCGCC	1 cut(s)	2407
NcoI	CCATGG	2 cut(s)	578, 3234
NdeI	CATATG	1 cut(s)	453
NgoMIV	GCCGGC	1 cut(s)	1920
NlaIV	GGNNCC	5 cut(s)	1439, 2408, 2895, 3018, 3199
NmeAIII	GCCGAG	2 cut(s)	142, 1190
NmuCI	GTSAC	5 cut(s)	14, 139, 1321, 2413, 3558
NsiI	ATGCAT	3 cut(s)	1000, 2309, 3601
NspI	RCATGY	9 cut(s)	541, 2307, 2390, 3081, 3207, 3376, 3402, 3510, 3574
OliI	CACNNNNGTG	3 cut(s)	526, 714, 2648
PaeI	GCATGC	2 cut(s)	2307, 2390
PaeR7I	CTCGAG	1 cut(s)	188
PceI	AGGCCT	1 cut(s)	3518
PciI	ACATGT	2 cut(s)	537, 3506
PciSI	GCTCTTC	1 cut(s)	2277
PcsI	WCGNNNNNNNCGW	1 cut(s)	336
PctI	GAATGC	3 cut(s)	437, 1537, 2273
PdiI	GCCGGC	1 cut(s)	1922
PdmI	GAANNNNTTC	2 cut(s)	1083, 2987
PflMI	CCANNNNNTGG	2 cut(s)	454, 1598
PfoI	TCCNGGA	1 cut(s)	2779
PinAI	ACCGGT	1 cut(s)	713
PleI	GAGTC	7 cut(s)	798, 935, 1199, 1352, 1664, 2497, 2954
PluTI	GGCGCC	1 cut(s)	2410
PpsI	GAGTC	7 cut(s)	798, 935, 1199, 1352, 1664, 2497, 2954
PpuMI	RGGWCCY	1 cut(s)	3016
PscI	ACATGT	2 cut(s)	537, 3506
PshBI	ATTAAT	3 cut(s)	1710, 2229, 3423
PsiI	TTATAA	1 cut(s)	1238
Psp124BI	GAGCTC	2 cut(s)	66, 123
Psp5II	RGGWCCY	1 cut(s)	3016
Psp6I	CCWGG	7 cut(s)	432, 699, 1361, 2351, 2409, 2779, 3737
PspGI	CCWGG	7 cut(s)	432, 699, 1361, 2351, 2409, 2779, 3737
PspN4I	GGNNCC	5 cut(s)	1439, 2408, 2895, 3018, 3199
PspOMI	GGGCCC	1 cut(s)	3197
PspPI	GGNCC	6 cut(s)	2143, 2253, 3016, 3197, 3198, 3475
PspPPI	RGGWCCY	1 cut(s)	3016
PstI	CTGCAG	3 cut(s)	495, 733, 3224
PstNI	CAGNNNCTG	2 cut(s)	2708, 2926
PsuI	RGATCY	6 cut(s)	568, 1816, 2518, 2848, 2893, 3146
PvuII	CAGCTG	1 cut(s)	1880
RsaI	GTAC	6 cut(s)	301, 536, 645, 1052, 1112, 1546
RsaNI	GTAC	6 cut(s)	300, 535, 644, 1051, 1111, 1545
RseI	CAYNNNNRTG	5 cut(s)	526, 714, 1755, 2648, 3575
SacI	GAGCTC	2 cut(s)	66, 123
SacII	CCGCGG	1 cut(s)	178
SapI	GCTCTTC	1 cut(s)	2277
SaqAI	TTAA	8 cut(s)	1025, 1503, 1710, 2229, 2262, 2636, 2966, 3423
Sau96I	GGNCC	6 cut(s)	2143, 2253, 3016, 3197, 3198, 3475
ScaI	AGTACT	1 cut(s)	1546
SchI	GAGTC	7 cut(s)	799, 935, 1200, 1352, 1664, 2498, 2955
ScrFI	CCNGG	7 cut(s)	434, 701, 1363, 2353, 2411, 2781, 3739
SduI	GDGCHC	5 cut(s)	66, 123, 3132, 3201, 3716
SfcI	CTRYAG	7 cut(s)	491, 552, 729, 1114, 1249, 2514, 3220
SfoI	GGCGCC	1 cut(s)	2408
Sfr274I	CTCGAG	1 cut(s)	188
Sfr303I	CCGCGG	1 cut(s)	178
SgrAI	CRCCGGYG	1 cut(s)	713
SgrBI	CCGCGG	1 cut(s)	178
SinI	GGWCC	2 cut(s)	2143, 3016
SlaI	CTCGAG	1 cut(s)	188
SmiMI	CAYNNNNRTG	5 cut(s)	526, 714, 1755, 2648, 3575
SmlI	CTYRAG	6 cut(s)	188, 215, 749, 1121, 1699, 1844
SmoI	CTYRAG	6 cut(s)	188, 215, 749, 1121, 1699, 1844
SphI	GCATGC	2 cut(s)	2307, 2390
SseBI	AGGCCT	1 cut(s)	3518
SsiI	CCGC	8 cut(s)	6, 150, 175, 177, 2471, 2830, 2878, 3552
SspDI	GGCGCC	1 cut(s)	2406
SspI	AATATT	2 cut(s)	937, 1500
SspMI	CTAG	5 cut(s)	266, 272, 563, 2051, 2087
SstI	GAGCTC	2 cut(s)	66, 123
StuI	AGGCCT	1 cut(s)	3518
StyD4I	CCNGG	7 cut(s)	432, 699, 1361, 2351, 2409, 2779, 3737
StyI	CCWWGG	6 cut(s)	578, 1870, 1992, 2523, 2889, 3234
TaiI	ACGT	1 cut(s)	141
TaqI	TCGA	6 cut(s)	189, 339, 706, 1582, 3316, 3503
TatI	WGTACW	4 cut(s)	299, 534, 1110, 1544
TauI	GCSGC	5 cut(s)	9, 152, 177, 180, 3555
Tru1I	TTAA	8 cut(s)	1025, 1503, 1710, 2229, 2262, 2636, 2966, 3423
Tru9I	TTAA	8 cut(s)	1025, 1503, 1710, 2229, 2262, 2636, 2966, 3423
TscAI	CASTG	5 cut(s)	242, 1603, 2650, 2755, 3229
TseFI	GTSAC	5 cut(s)	14, 139, 1321, 2413, 3558
TseI	GCWGC	7 cut(s)	493, 559, 1377, 1492, 1898, 3074, 3108
Tsp45I	GTSAC	5 cut(s)	14, 139, 1321, 2413, 3558
TspGWI	ACGGA	3 cut(s)	614, 1430, 2825
TspRI	CASTG	5 cut(s)	242, 1603, 2650, 2755, 3229
Van91I	CCANNNNNTGG	2 cut(s)	454, 1598
VpaK11BI	GGWCC	2 cut(s)	2143, 3016
VspI	ATTAAT	3 cut(s)	1710, 2229, 3423
XapI	RAATTY	9 cut(s)	398, 1067, 1145, 1169, 1474, 2594, 2987, 3183, 3255
XbaI	TCTAGA	1 cut(s)	2086
XceI	RCATGY	9 cut(s)	541, 2307, 2390, 3081, 3207, 3376, 3402, 3510, 3574
XcmI	CCANNNNNNNNNTGG	1 cut(s)	821
XhoI	CTCGAG	1 cut(s)	188
XmiI	GTMKAC	1 cut(s)	3536
XmnI	GAANNNNTTC	2 cut(s)	1083, 2987
XspI	CTAG	5 cut(s)	266, 272, 563, 2051, 2087
ZrmI	AGTACT	1 cut(s)	1546
Zsp2I	ATGCAT	3 cut(s)	1000, 2309, 3601

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.