Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp01

Orthogroup ID

OG0002376

Physical Location & Seq

Genomic Coordinates Reverse (-)

30398341 .. 30404706

Gene Structure 6366 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.1G314300.2

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3600 bp

ATGGCGGCACCATTTCCTGGCGGTGGAGGAGGAGGCGTGGCGGTAATGGCTGGGCCTCTGACGCCGCTCGATCCCTCGCCTTCCAAGACTTGCTTGAAGAATTCGGCGCTCAAGTCTCCAATTCTCATCTTCTTGCTGTTTCACAAAGCTATTCGCTCCGAGCTCGATGGCCTCCACCAAGCCGCCATGGCCTTCGCCACCAGCCAAGCCTCTTCCGCCGACATCGAGCCCTTGTTAGAGCGCTACCACTTCCTTCGCGCTATTTATAAGCACCACTGCAATGCCGAGGACGAGGTCATATTTCCAGCTCTAGATATACGCGTGAAGAATGTAGCTCGAACTTATTCTCTTGAACACGAGGGAGAGAGTGTTCTTTTTGATCAATTGTTTGAGCTTCTAAATTCCAATATGCAAAATGAGGAGAGCTACCGGAGAGAGTTGGCTTCTTGCACTGGAGCCCTTCAAACATCAATTAGCCAGCATATGTCCAAGGAAGAGGAACAGGTCTTCCCGTTGCTTATTGAGAAGTTTACATTTGAAGAACAAGCTTCCTTGGTGTGGCAGTTTCTGTGCAGTATTCCTGTTAACATGATGGCAGAATTTCTTCCGTGGCTCTCTTCTTCCATATCATCTGATGAACATCAGGATATGCGCAAGTACTTGAGCAAGGTGATACCAGAAGAGAAGCTTCTGCAGCAGGTTTATGATACGAAGGTTGTATTTGCCTGGATGGAAGGCGCAAAAGTTTCTGAGTCCAAAAATAATTCCAACGGCCAATTTCAAGATTCTGCAAAGAAGGGGCAGTGTGCATGTCAATCTTCCAAGACTTGTAAAAGGAAGCGCGTGGAGATAAAATCTGATAATTCCAGTACTATTGTTTCAAATCCTATAGATGAAATACTTCTTTGGCACAATGCTATAAAAAGAGAGTTAAATGACATAGTTGAGGCATCTAGGAGGATACAACTTTCTGGGGATTTTTCTGACTTGTCTGCATTCAACAAGAGGTTACAATTCATTGCAGAAGTTTGTATTTTCCATAGCATTGCTGAGGACAAAGTTATATTCCCTGCTCTAGATGCAGAACTCACTTTTGCTCAGGAGCATGCAGAAGAAGAAATTCAATTTGACAAGCTTAGGCACCTCATGGAAAGCATTCAGAGGGCAGGAGCTAACTCATCTACTTCTGAATTTTATATGAAGTTGTGCTCTCATGCTGATCAGATAATAGATAGCATACTGAAGCATTTCCAGAATGAGGAACTTCAGGTTCTTCCACTTGCTCGTAAGCATTTTAGCTCCAAAATACAGCGAAAACTTCTGTATCAAAGCTTATGTCTGATGCCCTTGAAGTTGATTGAGTGTGTCCTGCCATGGCTCGTAGGATCACTTAGTGAAGAGCAAGCAAGTTCCTTTCTTCAAAATATTCGTATAGCAGCTCCAGCATCAGATTCAGCACTGGTTACTCTTTTTTCTGGATGGGCATGCAAAGGTCGTTCTGCGAACATGTGTTTGTCTTCATGCATTCAAACAGATGGAGCAGATGATAATCAAAGGCCAGTGAAGAGTGTAAGCTTGATATCAGAAGCTGCTGCTTGCCAGGCTATGGAAAGTGTAAATACCCTTCAAAGTTCTTGTGGTAACCAGACATGCTGTGTCCCAGGGTTAGGAGTAAATGACAGTAATTTAGGAGTGGGTTCTCTTACTGCAGCAAAATCTCTGCGCGCCTTATCTTTTAATCCTTCTGCTCCTTCGCTCAACTCCAGTCTTTTTAACTGGGAAACAGATGCCAGCTTTACTGACACCAATAGTGCACCACGACCCATTGATAACATATTTAAGTTCCATAAAGCTATACGTAAAGACTTGGAGTATTTGGATGTTGAATCTGGAAAGCTTAATGATTGTAATGAGACTTTTATTAGGCATTTTACTGGTAGATTTCGGTTGTTGTGGGGTCTATACAGAGCTCATAGTAATGCAGAGGATGATATTGTATTTCCAGCATTAGAATCAAAAGAGACTCTTCATAACGTCAGCCATGCTTACACTCTGGATCACAAGCAGGAAGAGAAACTGTTTGAGGATATTTCTTCTGTTCTTTCTGAGCTTTCACAACTTAGTGAATTCATAAGCACTGGAAATTTTTCTGATGATTCAACTCAAAGCGGCTTTAACTCTTTCGAGCATAATGATACTCTGAGGAAGTACAATGAGCTAGCCACAAAGCTTCAGGGCATGTGCAAATCCATTAGAGTGACACTGGATCAACATGTTTTCCGCGAAGAACTTGAACTGTGGCCATTGTTTGATAAGCATTTTTCCGTGGAAGAACAAGATAAAATTGTGGGTAGAATAATTGGTACTACAGGTGCAGAGGTTCTTCAATCAATGTTGCCGTGGGTAACTGATGTTCTTACTCAGGAAGAGCAAAATAAATTAATGGACACATGGAAGCAGGCAACCAAAAATACGATGTTCAGTGAGTGGCTTAATGAATGGTGGGATGGAACTCCTGCTGCATCTTCACATACAGAAACACTGGAAAATTGCAGTTCTCTAGTTTCAGGTGCCGATGCCTATGAAAGCTTGGGGCACAGTGATGACACATTTAAACCTGGATGGAAAGATATATTTAGGATGAATCAGAATGAGCTTGAATCAGAAATAAGAAAAGTTTCTCGGGATTCAACTCTTGATCCTAGAAGAAAAGCATATCTTATTCAAAATCTAATGACCAGTCGCTGGATAGCTTCTCAGCAGAAGTCACCTCAAGCATCTGCAGTCGAAGGTTCAAATGGTGAAGATTTGCTTGGATGTTCACCGTCATTTTGTGATTCACAGAAACAAGTGTTTGGATGTGAGCATTACAAAAGAAATTGCAAAGTCCGTGCTGCGTGCTGTGGCAAGTTATTTACATGTAGGTTCTGCCATGATAACGTGAGCGACCATTCAATGGATCGGAAGGCTACATCTGAGATGATGTGCATGCGCTGCTTGAAAATACAGCCCGTGGGACCAGTCTGCACAACACCTTCATGTGGTGGCTTCTCGATGGCAAATTACTATTGTAGTATTTGCAAGTTTTTTGATGATGAAAGGACAGTTTATCATTGTCCTTCCTGCAATTTATGTCGTGTTGGGAAGGGACTTGGTATCGACTTCTTTCATTGCATGACGTGCAATTGTTGCCTGGGGATGAAGTTACTGGATCACAAATGTAGGGAGAAGGGTCTAGAAATAAACTGCCCCATCTGCTGTGACTTTTTGTTCACATCAAGTGCAACTGTGAGAGCTCTTCCTTGTGGCCATTACATGCATTCGGCTTGCTTCCAGGCATACACTTGCAGTCACTACGTCTGCCCAATCTGTAGCAAATCTTTGGGAGATATGGCGGTTTACTTTGGCATGCTTGATGCACTACTGGCTTCAGAGGAACTACCAGAAGAATACAGGGATCGGTGTCAGGACATACTGTGCAACGACTGTAATAAGAAGGGAACGGCACCCTTCCATTGGCTGTACCATAAGTGCGGGTCTTGTGGATCCTATAACACCAAGGTCATCAGAGTTGATTCCAACACCCACTGCTTGACATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004842 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006464 GO:0006508 GO:0006511 GO:0006807 GO:0008150 GO:0008152 GO:0008270 GO:0009056 GO:0009057 GO:0009987 GO:0010498 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0019941 GO:0030163 GO:0032446 GO:0036211 GO:0043161 GO:0043167 GO:0043169 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044424 GO:0044464 GO:0046872 GO:0046914 GO:0051603 GO:0061630 GO:0061659 GO:0070647 GO:0071704 GO:0140096 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Hemerythrin zf-CHY zf-RING_2 zinc_ribbon_6

Protein Analysis

1200

Amino Acids

134.6

Weight (kDa)

5.66

Isoelectric Point (pI)

51.58

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0002376)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G18290
fragaria_vesca	FvH4_4g26990 FvH4_4g26990 FvH4_4g26990 FvH4_4g26990 FvH4_5g11860 FvH4_5g11860 FvH4_5g11860
malus_domestica	MD06G1217900.v1.1 MD14G1228100.v1.1 MD16G1039900.v1.1
prunus_persica	Prupe.1G314300_v2.0.a1 Prupe.1G314300_v2.0.a1 Prupe.1G314300_v2.0.a1 Prupe.1G314300_v2.0.a1 Prupe.5G223100_v2.0.a1 Prupe.5G223100_v2.0.a1 Prupe.5G223100_v2.0.a1 Prupe.5G223100_v2.0.a1 Prupe.5G223100_v2.0.a1
pyrus_communis	pycom06g19410 pycom14g18950 pycom16g03460
rosa_chinensis	RchiOBHm_Chr4g0434791 RchiOBHm_Chr7g0185731
rosa_laevigata	RLG00000004888 RLG00000006649
rosa_multiflora	Rmu_sc0000179.1_g000001 Rmu_sc0002952.1_g000002
rosa_roxburghii	Rroxscaffold_3G00268670 Rroxscaffold_5G00376000
rosa_rugosa	Rorug04G0278300 Rorug04G0278400 Rorug06G0470900
rosa_samantha	Rh4AG334900 Rh4CG357800 Rh4DG337300 Rh7AG071600 Rh7BG076200 Rh7DG076200
rosa_wichuraiana	Rw4G029200 Rw7G006360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	267
Acc16I	TGCGCA	1 cut(s)	653
Acc36I	ACCTGC	1 cut(s)	688
AccB1I	GGYRCC	4 cut(s)	7, 1140, 2570, 3505
AccB7I	CCANNNNNTGG	4 cut(s)	17, 1606, 2745, 2956
AccBSI	CCGCTC	1 cut(s)	67
AccII	CGCG	5 cut(s)	258, 321, 843, 1725, 2283
AcoI	YGGCCR	3 cut(s)	772, 2300, 3307
AcsI	RAATTY	7 cut(s)	100, 400, 599, 1119, 1190, 2126, 2143
AcuI	CTGAAG	4 cut(s)	1250, 1262, 2216, 3414
AcyI	GRCGYC	1 cut(s)	62
AdeI	CACNNNGTG	1 cut(s)	1394
AfaI	GTAC	5 cut(s)	659, 871, 2210, 2365, 3524
AfeI	AGCGCT	1 cut(s)	242
AflIII	ACRYGT	4 cut(s)	319, 1506, 2272, 2918
AjiI	CACGTC	1 cut(s)	3180
AjnI	CCWGG	7 cut(s)	16, 725, 1599, 1660, 2617, 3192, 3333
AjuI	GAANNNNNNNTTGG	2 cut(s)	2796, 2828
AloI	GAACNNNNNNTCC	4 cut(s)	354, 386, 492, 524
Alw21I	GWGCWC	5 cut(s)	165, 1211, 1816, 1972, 3298
Alw26I	GTCTC	3 cut(s)	120, 1907, 2015
Alw44I	GTGCAC	1 cut(s)	1812
AlwNI	CAGNNNCTG	3 cut(s)	568, 1589, 2745
Ama87I	CYCGRG	1 cut(s)	2682
Aor51HI	AGCGCT	1 cut(s)	242
AoxI	GGCC	7 cut(s)	53, 169, 189, 772, 1556, 2300, 3307
ApaLI	GTGCAC	1 cut(s)	1812
ApeKI	GCWGC	8 cut(s)	694, 1436, 1589, 1592, 1709, 2519, 2894, 2994
ApoI	RAATTY	7 cut(s)	100, 400, 599, 1119, 1190, 2126, 2143
ArsI	GACNNNNNNTTYG	2 cut(s)	1321, 1353
AseI	ATTAAT	1 cut(s)	2441
Asp700I	GAANNNNTTC	8 cut(s)	343, 603, 900, 1119, 1155, 1247, 2146, 2677
AspLEI	GCGC	9 cut(s)	109, 243, 260, 654, 740, 843, 1725, 1727, 2994
AspS9I	GGNCC	2 cut(s)	53, 3017
AsuHPI	GGTGA	4 cut(s)	682, 2760, 2813, 2814
AsuNHI	GCTAGC	1 cut(s)	2218
AvaI	CYCGRG	1 cut(s)	2682
AvaII	GGWCC	1 cut(s)	3017
BaeGI	GKGCMC	2 cut(s)	1816, 2598
BaeI	ACNNNNGTAYC	4 cut(s)	699, 732, 1307, 1340
BalI	TGGCCA	2 cut(s)	2302, 3309
BamHI	GGATCC	1 cut(s)	3545
BanI	GGYRCC	4 cut(s)	7, 1140, 2570, 3505
BanII	GRGCYC	5 cut(s)	165, 231, 460, 1972, 3298
BarI	GAAGNNNNNNTAC	2 cut(s)	1608, 1640
BauI	CACGAG	1 cut(s)	356
BbsI	GAAGAC	2 cut(s)	499, 1509
Bbv12I	GWGCWC	5 cut(s)	165, 1211, 1816, 1972, 3298
BbvCI	CCTCAGC	1 cut(s)	1050
BbvI	GCAGC	8 cut(s)	706, 1448, 1576, 1579, 1721, 2506, 2881, 2981
BccI	CCATC	9 cut(s)	161, 586, 724, 1473, 1529, 2501, 2616, 3049, 3260
BceAI	ACGGC	3 cut(s)	787, 2383, 3519
BciT130I	CCWGG	7 cut(s)	18, 727, 1601, 1662, 2619, 3194, 3335
BciVI	GTATCC	1 cut(s)	954
BclI	TGATCA	2 cut(s)	379, 1219
BcoDI	GTCTC	3 cut(s)	120, 1907, 2015
BfaI	CTAG	7 cut(s)	311, 954, 1076, 2219, 2561, 2703, 3236
BfmI	CTRYAG	6 cut(s)	692, 888, 1707, 2367, 2781, 3370
BfoI	RGCGCY	2 cut(s)	110, 244
BfuAI	ACCTGC	1 cut(s)	688
BfuI	GTATCC	1 cut(s)	954
BglI	GCCNNNNNGGC	1 cut(s)	188
BmcAI	AGTACT	2 cut(s)	659, 871
Bme1390I	CCNGG	7 cut(s)	18, 727, 1601, 1662, 2619, 3194, 3335
Bme18I	GGWCC	1 cut(s)	3017
BmeT110I	CYCGRG	1 cut(s)	2682
BmgBI	CACGTC	1 cut(s)	3180
BmgT120I	GGNCC	2 cut(s)	53, 3017
BmiI	GGNNCC	7 cut(s)	9, 457, 1142, 2572, 3018, 3507, 3547
BmrFI	CCNGG	7 cut(s)	18, 727, 1601, 1662, 2619, 3194, 3335
BmrI	ACTGGG	1 cut(s)	1786
BmsI	GCATC	9 cut(s)	959, 1069, 1332, 1454, 1777, 2531, 2566, 2786, 3406
BmtI	GCTAGC	1 cut(s)	2222
BmuI	ACTGGG	1 cut(s)	1786
BpiI	GAAGAC	2 cut(s)	499, 1509
BpmI	CTGGAG	3 cut(s)	474, 1425, 1747
Bpu10I	CCTNAGC	3 cut(s)	1050, 1098, 1136
BpuEI	CTTGAG	3 cut(s)	95, 682, 2757
BsaAI	YACGTR	1 cut(s)	1859
BsaBI	GATNNNNATC	2 cut(s)	639, 1548
BsaHI	GRCGYC	1 cut(s)	62
BsaWI	WCCGGW	1 cut(s)	429
BsaXI	ACNNNNNCTCC	4 cut(s)	21, 51, 354, 384
Bse3DI	GCAATG	4 cut(s)	286, 1017, 1044, 3169
Bse8I	GATNNNNATC	2 cut(s)	639, 1548
BseBI	CCWGG	7 cut(s)	18, 727, 1601, 1662, 2619, 3194, 3335
BseJI	GATNNNNATC	2 cut(s)	639, 1548
BseMI	GCAATG	4 cut(s)	286, 1017, 1044, 3169
BseMII	CTCAG	8 cut(s)	741, 1041, 1112, 2097, 2192, 2435, 2771, 2967
BsePI	GCGCGC	1 cut(s)	1723
BseRI	GAGGAG	3 cut(s)	42, 45, 434
BseSI	GKGCMC	2 cut(s)	1816, 2598
BseXI	GCAGC	8 cut(s)	706, 1448, 1576, 1579, 1721, 2506, 2881, 2981
BseYI	CCCAGC	1 cut(s)	50
BsgI	GTGCAG	3 cut(s)	592, 2394, 3010
Bsh1236I	CGCG	5 cut(s)	258, 321, 843, 1725, 2283
BshFI	GGCC	7 cut(s)	55, 171, 191, 774, 1558, 2302, 3309
BshNI	GGYRCC	4 cut(s)	7, 1140, 2570, 3505
BsiHKAI	GWGCWC	5 cut(s)	165, 1211, 1816, 1972, 3298
BsiHKCI	CYCGRG	1 cut(s)	2682
BsiSI	CCGG	1 cut(s)	430
BslFI	GGGAC	3 cut(s)	1643, 3030, 3162
BsmAI	GTCTC	3 cut(s)	120, 1907, 2015
BsmFI	GGGAC	3 cut(s)	1643, 3030, 3162
BsmI	GAATGC	4 cut(s)	995, 1155, 1524, 3319
BsnI	GGCC	7 cut(s)	55, 171, 191, 774, 1558, 2302, 3309
BsoBI	CYCGRG	1 cut(s)	2682
Bsp1286I	GDGCHC	8 cut(s)	165, 231, 460, 1211, 1816, 1972, 2598, 3298
Bsp19I	CCATGG	2 cut(s)	186, 1373
BspANI	GGCC	7 cut(s)	55, 171, 191, 774, 1558, 2302, 3309
BspCNI	CTCAG	8 cut(s)	742, 1042, 1111, 2098, 2193, 2434, 2770, 2968
BspFNI	CGCG	5 cut(s)	258, 321, 843, 1725, 2283
BspLI	GGNNCC	7 cut(s)	9, 457, 1142, 2572, 3018, 3507, 3547
BspMAI	CTGCAG	3 cut(s)	696, 1711, 2785
BspMI	ACCTGC	1 cut(s)	688
BspOI	GCTAGC	1 cut(s)	2222
BspQI	GCTCTTC	3 cut(s)	1392, 2421, 3303
BspT107I	GGYRCC	4 cut(s)	7, 1140, 2570, 3505
BsrBI	CCGCTC	1 cut(s)	67
BsrDI	GCAATG	4 cut(s)	286, 1017, 1044, 3169
BssHII	GCGCGC	1 cut(s)	1723
BssNI	GRCGYC	1 cut(s)	62
BssSI	CACGAG	1 cut(s)	356
BssT1I	CCWWGG	5 cut(s)	186, 489, 552, 1373, 3558
Bst2BI	CACGAG	1 cut(s)	356
Bst2UI	CCWGG	7 cut(s)	18, 727, 1601, 1662, 2619, 3194, 3335
Bst4CI	ACNGT	9 cut(s)	1682, 2079, 2298, 2600, 2826, 3106, 3289, 3477, 3488
BstACI	GRCGYC	1 cut(s)	62
BstAPI	GCANNNNNTGC	3 cut(s)	2994, 3180, 3189
BstBAI	YACGTR	1 cut(s)	1859
BstDSI	CCRYGG	6 cut(s)	186, 608, 1373, 2325, 2399, 3012
BstEII	GGTNACC	1 cut(s)	1640
BstFNI	CGCG	5 cut(s)	258, 321, 843, 1725, 2283
BstH2I	RGCGCY	2 cut(s)	110, 244
BstHHI	GCGC	9 cut(s)	109, 243, 260, 654, 740, 843, 1725, 1727, 2994
BstMAI	GTCTC	3 cut(s)	120, 1907, 2015
BstNI	CCWGG	7 cut(s)	18, 727, 1601, 1662, 2619, 3194, 3335
BstPI	GGTNACC	1 cut(s)	1640
BstSCI	CCNGG	7 cut(s)	16, 725, 1599, 1660, 2617, 3192, 3333
BstSFI	CTRYAG	6 cut(s)	692, 888, 1707, 2367, 2781, 3370
BstSLI	GKGCMC	2 cut(s)	1816, 2598
BstSNI	TACGTA	1 cut(s)	1859
BstUI	CGCG	5 cut(s)	258, 321, 843, 1725, 2283
BstV1I	GCAGC	8 cut(s)	706, 1448, 1576, 1579, 1721, 2506, 2881, 2981
BstV2I	GAAGAC	2 cut(s)	499, 1509
BstX2I	RGATCY	1 cut(s)	3545
BstYI	RGATCY	1 cut(s)	3545
BsuI	GTATCC	1 cut(s)	954
BsuRI	GGCC	7 cut(s)	55, 171, 191, 774, 1558, 2302, 3309
BtgI	CCRYGG	6 cut(s)	186, 608, 1373, 2325, 2399, 3012
BtrI	CACGTC	1 cut(s)	3180
BtsI	GCAGTG	3 cut(s)	274, 809, 3586
BveI	ACCTGC	1 cut(s)	688
CaiI	CAGNNNCTG	3 cut(s)	568, 1589, 2745
CfoI	GCGC	9 cut(s)	109, 243, 260, 654, 740, 843, 1725, 1727, 2994
Cfr13I	GGNCC	2 cut(s)	53, 3017
CseI	GACGC	1 cut(s)	70
Csp6I	GTAC	5 cut(s)	658, 870, 2209, 2364, 3523
CviQI	GTAC	5 cut(s)	658, 870, 2209, 2364, 3523
DraI	TTTAAA	1 cut(s)	2614
DraIII	CACNNNGTG	1 cut(s)	1394
EaeI	YGGCCR	3 cut(s)	772, 2300, 3307
EciI	GGCGGA	1 cut(s)	205
Ecl136II	GAGCTC	3 cut(s)	163, 1970, 3296
Eco105I	TACGTA	1 cut(s)	1859
Eco130I	CCWWGG	5 cut(s)	186, 489, 552, 1373, 3558
Eco24I	GRGCYC	5 cut(s)	165, 231, 460, 1972, 3298
Eco32I	GATATC	1 cut(s)	1581
Eco47I	GGWCC	1 cut(s)	3017
Eco47III	AGCGCT	1 cut(s)	242
Eco53kI	GAGCTC	3 cut(s)	163, 1970, 3296
Eco57I	CTGAAG	4 cut(s)	1250, 1262, 2216, 3414
Eco88I	CYCGRG	1 cut(s)	2682
Eco91I	GGTNACC	1 cut(s)	1640
EcoICRI	GAGCTC	3 cut(s)	163, 1970, 3296
EcoO65I	GGTNACC	1 cut(s)	1640
EcoRI	GAATTC	2 cut(s)	100, 2126
EcoRII	CCWGG	7 cut(s)	16, 725, 1599, 1660, 2617, 3192, 3333
EcoRV	GATATC	1 cut(s)	1581
EcoT14I	CCWWGG	5 cut(s)	186, 489, 552, 1373, 3558
EcoT22I	ATGCAT	2 cut(s)	1526, 3321
EcoT38I	GRGCYC	5 cut(s)	165, 231, 460, 1972, 3298
ErhI	CCWWGG	5 cut(s)	186, 489, 552, 1373, 3558
FaqI	GGGAC	3 cut(s)	1643, 3030, 3162
FauI	CCCGC	1 cut(s)	3527
FauNDI	CATATG	1 cut(s)	483
FbaI	TGATCA	2 cut(s)	379, 1219
FriOI	GRGCYC	5 cut(s)	165, 231, 460, 1972, 3298
FspBI	CTAG	7 cut(s)	311, 954, 1076, 2219, 2561, 2703, 3236
FspI	TGCGCA	1 cut(s)	653
GlaI	GCGC	9 cut(s)	108, 242, 259, 653, 739, 842, 1724, 1726, 2993
GsaI	CCCAGC	1 cut(s)	54
GsuI	CTGGAG	3 cut(s)	474, 1425, 1747
HaeII	RGCGCY	2 cut(s)	110, 244
HaeIII	GGCC	7 cut(s)	55, 171, 191, 774, 1558, 2302, 3309
HapII	CCGG	1 cut(s)	430
HgaI	GACGC	1 cut(s)	70
HhaI	GCGC	9 cut(s)	109, 243, 260, 654, 740, 843, 1725, 1727, 2994
Hin1I	GRCGYC	1 cut(s)	62
Hin6I	GCGC	9 cut(s)	107, 241, 258, 652, 738, 841, 1723, 1725, 2992
HinP1I	GCGC	9 cut(s)	107, 241, 258, 652, 738, 841, 1723, 1725, 2992
HincII	GTYRAC	1 cut(s)	586
HindII	GTYRAC	1 cut(s)	586
HindIII	AAGCTT	8 cut(s)	546, 686, 1133, 1330, 1573, 1895, 2228, 2587
HpaI	GTTAAC	1 cut(s)	586
HpaII	CCGG	1 cut(s)	430
HphI	GGTGA	4 cut(s)	682, 2760, 2813, 2814
Hpy166II	GTNNAC	6 cut(s)	531, 586, 1814, 2822, 3273, 3400
Hpy8I	GTNNAC	6 cut(s)	531, 586, 1814, 2822, 3273, 3400
HpyCH4III	ACNGT	9 cut(s)	1682, 2079, 2298, 2600, 2826, 3106, 3289, 3477, 3488
HpyCH4IV	ACGT	5 cut(s)	1858, 2034, 2940, 3179, 3357
HpySE526I	ACGT	5 cut(s)	1858, 2034, 2940, 3179, 3357
Hsp92I	GRCGYC	1 cut(s)	62
HspAI	GCGC	9 cut(s)	107, 241, 258, 652, 738, 841, 1723, 1725, 2992
Ksp22I	TGATCA	2 cut(s)	379, 1219
KspAI	GTTAAC	1 cut(s)	586
LguI	GCTCTTC	3 cut(s)	1392, 2421, 3303
LmnI	GCTCC	8 cut(s)	161, 455, 1102, 1169, 1304, 1444, 1538, 1753
Lsp1109I	GCAGC	8 cut(s)	706, 1448, 1576, 1579, 1721, 2506, 2881, 2981
LweI	GCATC	9 cut(s)	959, 1069, 1332, 1454, 1777, 2531, 2566, 2786, 3406
MaeI	CTAG	7 cut(s)	311, 954, 1076, 2219, 2561, 2703, 3236
MaeII	ACGT	5 cut(s)	1858, 2034, 2940, 3179, 3357
MaeIII	GTNAC	9 cut(s)	1008, 1462, 1640, 2257, 2404, 2766, 3204, 3260, 3350
MbiI	CCGCTC	1 cut(s)	67
MfeI	CAATTG	2 cut(s)	383, 3184
MflI	RGATCY	1 cut(s)	3545
MhlI	GDGCHC	8 cut(s)	165, 231, 460, 1211, 1816, 1972, 2598, 3298
MlsI	TGGCCA	2 cut(s)	2302, 3309
MluI	ACGCGT	1 cut(s)	319
MluNI	TGGCCA	2 cut(s)	2302, 3309
MlyI	GAGTC	2 cut(s)	761, 2017
MmeI	TCCRAC	1 cut(s)	792
Mox20I	TGGCCA	2 cut(s)	2302, 3309
Mph1103I	ATGCAT	2 cut(s)	1526, 3321
MroXI	GAANNNNTTC	8 cut(s)	343, 603, 900, 1119, 1155, 1247, 2146, 2677
MscI	TGGCCA	2 cut(s)	2302, 3309
MslI	CAYNNNNRTG	5 cut(s)	279, 1977, 2255, 2601, 3037
Msp20I	TGGCCA	2 cut(s)	2302, 3309
MspI	CCGG	1 cut(s)	430
MspR9I	CCNGG	7 cut(s)	18, 727, 1601, 1662, 2619, 3194, 3335
MunI	CAATTG	2 cut(s)	383, 3184
Mva1269I	GAATGC	4 cut(s)	995, 1155, 1524, 3319
MvaI	CCWGG	7 cut(s)	18, 727, 1601, 1662, 2619, 3194, 3335
MvnI	CGCG	5 cut(s)	258, 321, 843, 1725, 2283
NcoI	CCATGG	2 cut(s)	186, 1373
NdeI	CATATG	1 cut(s)	483
NheI	GCTAGC	1 cut(s)	2218
NlaIV	GGNNCC	7 cut(s)	9, 457, 1142, 2572, 3018, 3507, 3547
NmeAIII	GCCGAG	1 cut(s)	310
NmuCI	GTSAC	4 cut(s)	2257, 2766, 3260, 3350
NsbI	TGCGCA	1 cut(s)	653
NsiI	ATGCAT	2 cut(s)	1526, 3321
PaeI	GCATGC	4 cut(s)	1109, 1488, 2992, 3412
PasI	CCCWGGG	1 cut(s)	1661
PauI	GCGCGC	1 cut(s)	1723
PciI	ACATGT	3 cut(s)	1506, 2272, 2918
PciSI	GCTCTTC	3 cut(s)	1392, 2421, 3303
PctI	GAATGC	4 cut(s)	995, 1155, 1524, 3319
PdmI	GAANNNNTTC	8 cut(s)	343, 603, 900, 1119, 1155, 1247, 2146, 2677
PflFI	GACNNNGTC	1 cut(s)	293
PflMI	CCANNNNNTGG	4 cut(s)	17, 1606, 2745, 2956
PleI	GAGTC	2 cut(s)	760, 2017
PpsI	GAGTC	2 cut(s)	760, 2017
Ppu21I	YACGTR	1 cut(s)	1859
PscI	ACATGT	3 cut(s)	1506, 2272, 2918
PshBI	ATTAAT	1 cut(s)	2441
PsiI	TTATAA	1 cut(s)	267
Psp124BI	GAGCTC	3 cut(s)	165, 1972, 3298
Psp6I	CCWGG	7 cut(s)	16, 725, 1599, 1660, 2617, 3192, 3333
PspEI	GGTNACC	1 cut(s)	1640
PspFI	CCCAGC	1 cut(s)	50
PspGI	CCWGG	7 cut(s)	16, 725, 1599, 1660, 2617, 3192, 3333
PspN4I	GGNNCC	7 cut(s)	9, 457, 1142, 2572, 3018, 3507, 3547
PspPI	GGNCC	2 cut(s)	53, 3017
PsrI	GAACNNNNNNTAC	2 cut(s)	2397, 2429
PstI	CTGCAG	3 cut(s)	696, 1711, 2785
PstNI	CAGNNNCTG	3 cut(s)	568, 1589, 2745
PsuI	RGATCY	1 cut(s)	3545
PsyI	GACNNNGTC	1 cut(s)	293
PteI	GCGCGC	1 cut(s)	1723
RsaI	GTAC	5 cut(s)	659, 871, 2210, 2365, 3524
RsaNI	GTAC	5 cut(s)	658, 870, 2209, 2364, 3523
RseI	CAYNNNNRTG	5 cut(s)	279, 1977, 2255, 2601, 3037
SacI	GAGCTC	3 cut(s)	165, 1972, 3298
SapI	GCTCTTC	3 cut(s)	1392, 2421, 3303
Sau96I	GGNCC	2 cut(s)	53, 3017
ScaI	AGTACT	2 cut(s)	659, 871
SchI	GAGTC	2 cut(s)	761, 2017
ScrFI	CCNGG	7 cut(s)	18, 727, 1601, 1662, 2619, 3194, 3335
SduI	GDGCHC	8 cut(s)	165, 231, 460, 1211, 1816, 1972, 2598, 3298
SfaNI	GCATC	9 cut(s)	959, 1069, 1332, 1454, 1777, 2531, 2566, 2786, 3406
SfcI	CTRYAG	6 cut(s)	692, 888, 1707, 2367, 2781, 3370
SinI	GGWCC	1 cut(s)	3017
SmiMI	CAYNNNNRTG	5 cut(s)	279, 1977, 2255, 2601, 3037
SmlI	CTYRAG	3 cut(s)	110, 661, 2772
SmoI	CTYRAG	3 cut(s)	110, 661, 2772
SnaBI	TACGTA	1 cut(s)	1859
SphI	GCATGC	4 cut(s)	1109, 1488, 2992, 3412
SspI	AATATT	1 cut(s)	1426
SspMI	CTAG	7 cut(s)	311, 954, 1076, 2219, 2561, 2703, 3236
SstI	GAGCTC	3 cut(s)	165, 1972, 3298
StyD4I	CCNGG	7 cut(s)	16, 725, 1599, 1660, 2617, 3192, 3333
StyI	CCWWGG	5 cut(s)	186, 489, 552, 1373, 3558
TaaI	ACNGT	9 cut(s)	1682, 2079, 2298, 2600, 2826, 3106, 3289, 3477, 3488
TaiI	ACGT	5 cut(s)	1861, 2037, 2943, 3182, 3360
TaqI	TCGA	8 cut(s)	69, 165, 225, 337, 2184, 2787, 3053, 3159
TatI	WGTACW	3 cut(s)	657, 869, 2208
TauI	GCSGC	4 cut(s)	8, 67, 185, 2172
TseFI	GTSAC	4 cut(s)	2257, 2766, 3260, 3350
TseI	GCWGC	8 cut(s)	694, 1436, 1589, 1592, 1709, 2519, 2894, 2994
Tsp45I	GTSAC	4 cut(s)	2257, 2766, 3260, 3350
TspGWI	ACGGA	3 cut(s)	597, 2314, 2879
Tth111I	GACNNNGTC	1 cut(s)	293
Van91I	CCANNNNNTGG	4 cut(s)	17, 1606, 2745, 2956
VneI	GTGCAC	1 cut(s)	1812
VpaK11BI	GGWCC	1 cut(s)	3017
VspI	ATTAAT	1 cut(s)	2441
XapI	RAATTY	7 cut(s)	100, 400, 599, 1119, 1190, 2126, 2143
XbaI	TCTAGA	3 cut(s)	310, 1075, 3235
XmnI	GAANNNNTTC	8 cut(s)	343, 603, 900, 1119, 1155, 1247, 2146, 2677
XspI	CTAG	7 cut(s)	311, 954, 1076, 2219, 2561, 2703, 3236
ZrmI	AGTACT	2 cut(s)	659, 871
Zsp2I	ATGCAT	2 cut(s)	1526, 3321

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.