Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp05

Orthogroup ID

OG0002376

Physical Location & Seq

Genomic Coordinates Reverse (-)

17309983 .. 17318415

Gene Structure 8433 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.5G223100.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3753 bp

ATGGCGACGCCGTTAACGGGGTTGCAGCACATGGACGGAGGCGGAGGAGTGGCGGTGCTGTCCAATTCCGTGAACAAGGTCGATTCTTCTTCGTCTTCTTCGGCCAATGGTTGCTTAAAGAGCTTGGAGCCGAGGTCTCCGATTCTGATTTTCTTGTTCTTTCACAAAGCAATTCGTAAAGAGCTCGATGCGCTTCACAGATTGGCCATGGCCTTCGCCATCGGAAAGCGAACCGATATTAGGCCGTTGCTCGAGCGCTACCATTTCTTAAGATCGATTTACAAGCACCACTCCAATGCTGAAGACGAGGTAATCTTTCCAGCTCTTGATATACGTGTGAAGAATGTAGCACAAACATACTCCCTCGAACATAAGGGCGAAACCAATCTTTTTGATCATTTATTTGAGCTGCTAAATTCTAATGCAAAAGATGATGAAAGTTTCCCGAGGGAGTTAGCATCTTGTACAGGAGCCCTACAAACATCGGTCAGCCAGCACATGGCTAAGGAGGAGGAACAGGTCTTTCCCTTGCTCATTGAGAAGTTCTCAGTTGAAGAGCAGGCATCGCTGGTCTGGCAGTTTCTGTGCAGCATTCCTGTCAATATGATGGCCGAGTTTCTTCCATGGCTTTCATCGTCTGTTTCACCTGACGAACATCTGGATTTGCGAAAATGCTTAAGCAAGATAGTTCCAGAGGAAAAGCTTCTTCAACAAGTAATTTTCACCTGGATGGAAGGTAGAAGAAGTGCTGACTTGTTTGAAAGTTCTCTAGATTCCCCTCAGTTCCAATGTTGTGTGGATTCTGGTGCTAGCACATCAAGTCAACATATGGAGAAGGTAAATTGTGCATGCGAGTGCAGGACTGGGAAGAGGAAGTATTTAGAGTCAAGTACGGATGTTTCTGATACCAGTGCGGGGCATCCAATAAATGAAATACTGCTTTGGCATAATGCCATTAAAAGGGAATTAAATGAGATAGCTGAGGAGGCTAGGAAGATACAACTGTCTGGAGATTTTACTAATCTATCAGCTTTCAATGAGAGGTTGCAATTTATTGCTGAAGTTTGCATCTTTCACAGTATTGCCGAGGACAAAGTCATATTTCCTGCAGTCGATGGAAAAATTTCCTTTTTCCAAGAGCACGCTGAAGAAGAAAGTCAATTCAATGAATTCAGGTGCTTGATTGAAACTATTCAAAGTGCAGGAGCAATCTCTACTTCAGCTGATTTTTATGCAAAGTTATGTTCACATGCTGATCAAATAATGGAAACTATCCAGAGGCACTTTAGCAATGAAGAAGTTCAGGTTCTTCCGCTTGCTCGAAAGCACTTCAGCTTCAAAAGACAGCGCGAACTTTTGTATCAAAGTTTGTGCATGATGCCCTTAAGACTTATTGAGCGTGTTTTGCCATGGCTAGTCGGGTCGTTGACGGAAGATGAAATGAAGAATTTTCTCAAAAACATGCAGTTAGCAGCTCCAGTGCCTGATTCTGCTTTGGTAACACTCTTTTCTGGATGGGCATGCAAGGCTCGTAATCAGGGTTCATGCTTGTCTTTAAGTGCAATTGGTTGCTGTCCTGTTAAAAGTTTCACTGATATTGAAGACGATTTTGTTCGTTCAGCATGTGCGTGTGCTTCTGCATTGTCTGCTAGAGACAGCTTGATATCAGCTCAAGCAAATAATGTGAAGAGGCTGGTCAAACGAAATGTTTCAATGTCATGCAAACACAGTGATGCCTCTGAACCTTCAGAGACTGTAAATGCCCAGAAACCATGTTGTAGTGATCAGTCCTGCTGTGTCCCAGGTTTAGGAGTAAACAGCAATAATCTTGGGTCAAGCTCTCTTTTTGGGGCCAAGTCTTTGCGATCCTTGTCTTTCAGCTCCAGTGCCCCATCTCTCAATTCCAGTCTTTTTGTCTGGGAAACAGATAGTTCCTCTTCTGATTTTGGCTGTGGAGAACGACCTATTGATACTATTTTCAAATTTCATAAAGCCATACGCAAAGATTTGGAGTATTTGGATATTGAATCTGGGAAGCTTAGTTATTGTGATGAAACCACCCTCCGGCAGTTTATAGGAAGGTTTCGCTTGCTGTGGGGCTTATACAGAGCACATAGTAATGCAGAGGATGATATAGTGTTTCCTGCGCTGGAATCCAAAGAGGCGCTGCATAATGTGAGTCACTCATACACACTGGACCATAAACAGGAGGAAAATTTATTTAAAGATATCTCACATGTTCTTTCCGAACTTTCTCACCTTCATGAAAGCTTGCAAAAGGCTCACATGGATGAGGATTTAGCTGGAAGTAGCATTAACTTTCTTGATGCTAATGATATCAACTATACTAGAAAGTATAATGAGCTAGCTACAAAGCTTCAAGGGATGTGCAAATCTATAAAAGTTACACTAGATCAGCATATTTTCAGGGAAGAACTTGAGCTGTGGCCGTTATTTGGCAGACACTTCACTGTCGAGGAGCAAGACAAAATAGTGGGCCGCATTATTGGGACCACTGGTGCTGAGGTGCTCCAATCAATGTTACCATGGGTGACTTCTGCACTTACTCAGGATGAACAGAACAAAATGATGGATACGTGGAAGCAAGCAACTAAAAATACAATGTTCAGTGAGTGGCTCAATGAATGTTGGAAAGGAACTTCAGAGTTAACTTCACGAACTGAAACATGGGAAAGCAGCATTCCTCAAAAAGGTGTTGAATTTCAAGAAAGCTTGGACCAGACTGATCAGATGTTCAAACCTGGTTGGAAGGATATTTTCCGTATGAATCAAAATGAACTTGAGTCAGAGATCAGAAAGGTTTATCGTGATGCGACTCTTGATCCAAGGAGAAAGGCATATCTTGTGCAGAATCTTATGACTAGCCGCTGGATTGCTACTCAGCAGAAGTTACCTCAAGAAATAGCAGGAGAATCTTCTACTGGTGAAGACGCAATTGGACGCTCACCATCATATCGAGATGCAGAGAAAAAAGAATTTGGGTGTGAACATTACAAAAGAAACTGCAAACTCCGAGCTGCTTGCTGTGGCAAGTTATTTGCATGTAGATTTTGCCATGATAATGTGAGCGATCATTCAATGGATAGGAAAGCAACATCAGAAATGATGTGCATGCGCTGCCTGAACGTTCAGCCGGTTGGGCCAATATGCACTACACCTTCATGCAATGAACTATCCATGGCAAAGTATTACTGCAATATATGCAAATTTTTTGATGATGAAAGGACTGTATATCATTGCCCGTTTTGCAATTTATGCCGCCTTGGAAAGGGTCTTGGCATTGACTTCTTTCATTGCATGACATGCAATTGTTGCCTGGGGATAAAGTTAGTGAACCACAAGTGCCTGGAGAAAAGTTTAGAAACAAATTGCCCCATTTGCTGTGATTTTTTATTCACATCAAGCGCAACAGTTAGAGCTCTGCCCTGTGGCCATTACATGCATTCTGCTTGCTTTCAGGCGTACACATGCAGTCACTATACTTGTCCAATTTGCAGCAAATCTTTGGGAGATATGGCGGTTTACTTTGGCATGCTTGATGCATTATTGGCTGCCGAGCAGCTTCCAGAGGAATACAGGAACCGTTGTCAGGACATCCTTTGTAACGACTGTGATCGAAAGGGTTCCTCACGGTTTCACTGGCTATATCACAAGTGTGGAAACTGTGGATCTTACAATACCCGGGTGATCAAGGGCGAGACAACAAATACCGACTGCCCTGCATCACACTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004842 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006464 GO:0006508 GO:0006511 GO:0006807 GO:0008150 GO:0008152 GO:0008270 GO:0009056 GO:0009057 GO:0009987 GO:0010498 GO:0016567 GO:0016740 GO:0019538 GO:0019787 GO:0019941 GO:0030163 GO:0032446 GO:0036211 GO:0043161 GO:0043167 GO:0043169 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0043632 GO:0044237 GO:0044238 GO:0044248 GO:0044257 GO:0044260 GO:0044265 GO:0044267 GO:0044424 GO:0044464 GO:0046872 GO:0046914 GO:0051603 GO:0061630 GO:0061659 GO:0070647 GO:0071704 GO:0140096 GO:1901564 GO:1901565 GO:1901575

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Hemerythrin zf-CHY zf-RING_2 zinc_ribbon_6

Protein Analysis

1251

Amino Acids

141.2

Weight (kDa)

5.87

Isoelectric Point (pI)

51.46

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0002376)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G18290
fragaria_vesca	FvH4_4g26990 FvH4_4g26990 FvH4_4g26990 FvH4_4g26990 FvH4_5g11860 FvH4_5g11860 FvH4_5g11860
malus_domestica	MD06G1217900.v1.1 MD14G1228100.v1.1 MD16G1039900.v1.1
prunus_persica	Prupe.1G314300_v2.0.a1 Prupe.1G314300_v2.0.a1 Prupe.1G314300_v2.0.a1 Prupe.1G314300_v2.0.a1 Prupe.5G223100_v2.0.a1 Prupe.5G223100_v2.0.a1 Prupe.5G223100_v2.0.a1 Prupe.5G223100_v2.0.a1 Prupe.5G223100_v2.0.a1
pyrus_communis	pycom06g19410 pycom14g18950 pycom16g03460
rosa_chinensis	RchiOBHm_Chr4g0434791 RchiOBHm_Chr7g0185731
rosa_laevigata	RLG00000004888 RLG00000006649
rosa_multiflora	Rmu_sc0000179.1_g000001 Rmu_sc0002952.1_g000002
rosa_roxburghii	Rroxscaffold_3G00268670 Rroxscaffold_5G00376000
rosa_rugosa	Rorug04G0278300 Rorug04G0278400 Rorug06G0470900
rosa_samantha	Rh4AG334900 Rh4CG357800 Rh4DG337300 Rh7AG071600 Rh7BG076200 Rh7DG076200
rosa_wichuraiana	Rw4G029200 Rw7G006360

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	1 cut(s)	499
AccII	CGCG	1 cut(s)	1350
AciI	CCGC	8 cut(s)	42, 53, 914, 1313, 2500, 2887, 3280, 3539
AclI	AACGTT	1 cut(s)	3147
AclWI	GGATC	3 cut(s)	1860, 2837, 3697
AcoI	YGGCCR	5 cut(s)	102, 204, 609, 2447, 3451
AcsI	RAATTY	9 cut(s)	415, 1122, 1169, 1447, 1982, 2215, 2720, 2996, 3227
AcuI	CTGAAG	7 cut(s)	321, 1080, 1167, 1203, 1315, 1731, 2646
AcyI	GRCGYC	1 cut(s)	8
AfaI	GTAC	3 cut(s)	466, 892, 3485
AfeI	AGCGCT	1 cut(s)	257
AflII	CTTAAG	3 cut(s)	268, 676, 1384
AflIII	ACRYGT	2 cut(s)	334, 2236
AjnI	CCWGG	5 cut(s)	725, 1801, 2761, 3336, 3366
AjuI	GAANNNNNNNTTGG	2 cut(s)	2940, 2972
AleI	CACNNNNGTG	1 cut(s)	3675
Alw21I	GWGCWC	5 cut(s)	186, 1143, 2113, 2532, 3442
Alw26I	GTCTC	4 cut(s)	141, 1647, 1745, 3713
AlwI	GGATC	3 cut(s)	1860, 2837, 3697
AlwNI	CAGNNNCTG	3 cut(s)	583, 1484, 1754
Ama87I	CYCGRG	3 cut(s)	251, 445, 3702
Aor51HI	AGCGCT	1 cut(s)	257
ApoI	RAATTY	9 cut(s)	415, 1122, 1169, 1447, 1982, 2215, 2720, 2996, 3227
Asp700I	GAANNNNTTC	6 cut(s)	702, 1123, 1191, 1299, 1708, 3643
AspLEI	GCGC	7 cut(s)	193, 258, 1350, 2149, 2167, 3138, 3428
AspS9I	GGNCC	6 cut(s)	1851, 2197, 2497, 2511, 2737, 3161
AsuC2I	CCSGG	2 cut(s)	3703, 3704
AsuHPI	GGTGA	7 cut(s)	636, 715, 2249, 2563, 2957, 2958, 3718
AsuNHI	GCTAGC	2 cut(s)	809, 2365
AvaI	CYCGRG	3 cut(s)	251, 445, 3702
AvaII	GGWCC	3 cut(s)	2197, 2511, 2737
BaeGI	GKGCMC	1 cut(s)	1891
BaeI	ACNNNNGTAYC	4 cut(s)	989, 1022, 1343, 1376
BalI	TGGCCA	2 cut(s)	206, 3453
BanII	GRGCYC	3 cut(s)	186, 475, 3442
BbsI	GAAGAC	4 cut(s)	87, 309, 1608, 2955
Bbv12I	GWGCWC	5 cut(s)	186, 1143, 2113, 2532, 3442
BbvCI	CCTCAGC	2 cut(s)	981, 2523
BccI	CCATC	8 cut(s)	227, 601, 724, 1109, 1509, 1900, 2584, 2977
BceAI	ACGGC	2 cut(s)	229, 2434
BcgI	CGANNNNNNTGC	3 cut(s)	3024, 3058, 3722
BciT130I	CCWGG	5 cut(s)	727, 1803, 2763, 3338, 3368
BciVI	GTATCC	1 cut(s)	2587
BclI	TGATCA	5 cut(s)	394, 1255, 1783, 2746, 3708
BcnI	CCSGG	2 cut(s)	3703, 3704
BcoDI	GTCTC	4 cut(s)	141, 1647, 1745, 3713
BfaI	CTAG	9 cut(s)	770, 810, 990, 1415, 1650, 2349, 2366, 2411, 2883
BfmI	CTRYAG	1 cut(s)	1107
BfoI	RGCGCY	2 cut(s)	259, 2168
BfrI	CTTAAG	3 cut(s)	268, 676, 1384
BfuI	GTATCC	1 cut(s)	2587
BglI	GCCNNNNNGGC	1 cut(s)	3160
Bme1390I	CCNGG	7 cut(s)	727, 1803, 2763, 3338, 3368, 3703, 3704
Bme18I	GGWCC	3 cut(s)	2197, 2511, 2737
BmeT110I	CYCGRG	3 cut(s)	251, 445, 3702
BmgT120I	GGNCC	6 cut(s)	1851, 2197, 2497, 2511, 2737, 3161
BmiI	GGNNCC	6 cut(s)	129, 472, 1852, 2512, 3602, 3646
BmrFI	CCNGG	7 cut(s)	727, 1803, 2763, 3338, 3368, 3703, 3704
BmrI	ACTGGG	1 cut(s)	873
BmtI	GCTAGC	2 cut(s)	813, 2369
BmuI	ACTGGG	1 cut(s)	873
BpiI	GAAGAC	4 cut(s)	87, 309, 1608, 2955
BplI	GAGNNNNNCTC	2 cut(s)	530, 562
BpmI	CTGGAG	4 cut(s)	1029, 1461, 1867, 3389
Bpu10I	CCTNAGC	3 cut(s)	504, 981, 2523
BpuEI	CTTGAG	4 cut(s)	1656, 2459, 2822, 2901
BpuMI	CCSGG	2 cut(s)	3703, 3704
Bsa29I	ATCGAT	1 cut(s)	275
BsaAI	YACGTR	2 cut(s)	335, 2598
BsaHI	GRCGYC	1 cut(s)	8
BsaI	GGTCTC	1 cut(s)	141
BsaXI	ACNNNNNCTCC	4 cut(s)	39, 69, 119, 149
Bse118I	RCCGGY	1 cut(s)	3154
Bse1I	ACTGG	9 cut(s)	868, 909, 1478, 1884, 1905, 2199, 2521, 2947, 3665
Bse3DI	GCAATG	4 cut(s)	1297, 3193, 3256, 3313
BseBI	CCWGG	5 cut(s)	727, 1803, 2763, 3338, 3368
BseCI	ATCGAT	1 cut(s)	275
BseGI	GGATG	9 cut(s)	735, 901, 919, 1520, 2134, 2296, 2391, 2578, 3615
BseMI	GCAATG	4 cut(s)	1297, 3193, 3256, 3313
BseMII	CTCAG	6 cut(s)	561, 794, 972, 2514, 2582, 2915
BseNI	ACTGG	9 cut(s)	868, 909, 1478, 1884, 1905, 2199, 2521, 2947, 3665
BseRI	GAGGAG	4 cut(s)	60, 524, 998, 2492
BseSI	GKGCMC	1 cut(s)	1891
BsgI	GTGCAG	5 cut(s)	607, 877, 1221, 2544, 2888
Bsh1236I	CGCG	1 cut(s)	1350
BshVI	ATCGAT	1 cut(s)	275
BsiHKAI	GWGCWC	5 cut(s)	186, 1143, 2113, 2532, 3442
BsiHKCI	CYCGRG	3 cut(s)	251, 445, 3702
BsiSI	CCGG	3 cut(s)	2065, 3155, 3703
BslFI	GGGAC	2 cut(s)	1784, 2524
BsmAI	GTCTC	4 cut(s)	141, 1647, 1745, 3713
BsmFI	GGGAC	2 cut(s)	1784, 2524
BsmI	GAATGC	3 cut(s)	591, 2700, 3463
Bso31I	GGTCTC	1 cut(s)	141
BsoBI	CYCGRG	3 cut(s)	251, 445, 3702
Bsp1286I	GDGCHC	7 cut(s)	186, 475, 1143, 1891, 2113, 2532, 3442
Bsp1407I	TGTACA	1 cut(s)	464
Bsp19I	CCATGG	5 cut(s)	207, 623, 1409, 2546, 3198
BspACI	CCGC	8 cut(s)	42, 53, 914, 1313, 2500, 2887, 3280, 3539
BspCNI	CTCAG	6 cut(s)	560, 793, 973, 2515, 2581, 2914
BspDI	ATCGAT	1 cut(s)	275
BspFNI	CGCG	1 cut(s)	1350
BspHI	TCATGA	1 cut(s)	2263
BspLI	GGNNCC	6 cut(s)	129, 472, 1852, 2512, 3602, 3646
BspMAI	CTGCAG	1 cut(s)	1111
BspOI	GCTAGC	2 cut(s)	813, 2369
BspPI	GGATC	3 cut(s)	1860, 2837, 3697
BspQI	GCTCTTC	1 cut(s)	549
BspTI	CTTAAG	3 cut(s)	268, 676, 1384
BspTNI	GGTCTC	1 cut(s)	141
BsrDI	GCAATG	4 cut(s)	1297, 3193, 3256, 3313
BsrFI	RCCGGY	1 cut(s)	3154
BsrGI	TGTACA	1 cut(s)	464
BsrI	ACTGG	9 cut(s)	868, 909, 1478, 1884, 1905, 2199, 2521, 2947, 3665
BssAI	RCCGGY	1 cut(s)	3154
BssNI	GRCGYC	1 cut(s)	8
BssT1I	CCWWGG	7 cut(s)	207, 623, 1409, 2546, 2846, 3198, 3283
Bst2UI	CCWGG	5 cut(s)	727, 1803, 2763, 3338, 3368
Bst6I	CTCTTC	4 cut(s)	549, 863, 1682, 1942
BstACI	GRCGYC	1 cut(s)	8
BstAFI	CTTAAG	3 cut(s)	268, 676, 1384
BstAPI	GCANNNNNTGC	6 cut(s)	1646, 3138, 3222, 3276, 3324, 3333
BstAUI	TGTACA	1 cut(s)	464
BstBAI	YACGTR	2 cut(s)	335, 2598
BstDEI	CTNAG	8 cut(s)	504, 547, 780, 981, 2039, 2523, 2568, 2901
BstDSI	CCRYGG	5 cut(s)	207, 623, 1409, 2546, 3198
BstENI	CCTNNNNNAGG	2 cut(s)	2709, 3287
BstF5I	GGATG	9 cut(s)	735, 901, 919, 1520, 2134, 2296, 2391, 2578, 3615
BstFNI	CGCG	1 cut(s)	1350
BstH2I	RGCGCY	2 cut(s)	259, 2168
BstHHI	GCGC	7 cut(s)	193, 258, 1350, 2149, 2167, 3138, 3428
BstMAI	GTCTC	4 cut(s)	141, 1647, 1745, 3713
BstNI	CCWGG	5 cut(s)	727, 1803, 2763, 3338, 3368
BstSCI	CCNGG	7 cut(s)	725, 1801, 2761, 3336, 3366, 3701, 3702
BstSFI	CTRYAG	1 cut(s)	1107
BstSLI	GKGCMC	1 cut(s)	1891
BstUI	CGCG	1 cut(s)	1350
BstV2I	GAAGAC	4 cut(s)	87, 309, 1608, 2955
BstX2I	RGATCY	1 cut(s)	3689
BstYI	RGATCY	1 cut(s)	3689
Bsu15I	ATCGAT	1 cut(s)	275
BsuI	GTATCC	1 cut(s)	2587
BsuTUI	ATCGAT	1 cut(s)	275
BtgI	CCRYGG	5 cut(s)	207, 623, 1409, 2546, 3198
BtgZI	GCGATG	1 cut(s)	549
BtsCI	GGATG	9 cut(s)	735, 901, 919, 1520, 2134, 2296, 2391, 2578, 3615
CaiI	CAGNNNCTG	3 cut(s)	583, 1484, 1754
CciI	TCATGA	1 cut(s)	2263
CfoI	GCGC	7 cut(s)	193, 258, 1350, 2149, 2167, 3138, 3428
Cfr10I	RCCGGY	1 cut(s)	3154
Cfr13I	GGNCC	6 cut(s)	1851, 2197, 2497, 2511, 2737, 3161
Cfr9I	CCCGGG	1 cut(s)	3702
ClaI	ATCGAT	1 cut(s)	275
CseI	GACGC	3 cut(s)	16, 2960, 2970
CsiI	ACCWGGT	1 cut(s)	2761
Csp6I	GTAC	3 cut(s)	465, 891, 3484
CviQI	GTAC	3 cut(s)	465, 891, 3484
DdeI	CTNAG	8 cut(s)	504, 547, 780, 981, 2039, 2523, 2568, 2901
DraI	TTTAAA	1 cut(s)	2224
EaeI	YGGCCR	5 cut(s)	102, 204, 609, 2447, 3451
Eam1104I	CTCTTC	4 cut(s)	549, 863, 1682, 1942
EarI	CTCTTC	4 cut(s)	549, 863, 1682, 1942
EciI	GGCGGA	1 cut(s)	57
Ecl136II	GAGCTC	2 cut(s)	184, 3440
Eco130I	CCWWGG	7 cut(s)	207, 623, 1409, 2546, 2846, 3198, 3283
Eco24I	GRGCYC	3 cut(s)	186, 475, 3442
Eco31I	GGTCTC	1 cut(s)	141
Eco32I	GATATC	3 cut(s)	1665, 2230, 2338
Eco47I	GGWCC	3 cut(s)	2197, 2511, 2737
Eco47III	AGCGCT	1 cut(s)	257
Eco53kI	GAGCTC	2 cut(s)	184, 3440
Eco57I	CTGAAG	7 cut(s)	321, 1080, 1167, 1203, 1315, 1731, 2646
Eco88I	CYCGRG	3 cut(s)	251, 445, 3702
EcoICRI	GAGCTC	2 cut(s)	184, 3440
EcoNI	CCTNNNNNAGG	2 cut(s)	2709, 3287
EcoRI	GAATTC	1 cut(s)	1169
EcoRII	CCWGG	5 cut(s)	725, 1801, 2761, 3336, 3366
EcoRV	GATATC	3 cut(s)	1665, 2230, 2338
EcoT14I	CCWWGG	7 cut(s)	207, 623, 1409, 2546, 2846, 3198, 3283
EcoT22I	ATGCAT	2 cut(s)	3465, 3565
EcoT38I	GRGCYC	3 cut(s)	186, 475, 3442
ErhI	CCWWGG	7 cut(s)	207, 623, 1409, 2546, 2846, 3198, 3283
FaqI	GGGAC	2 cut(s)	1784, 2524
FauI	CCCGC	1 cut(s)	907
FauNDI	CATATG	1 cut(s)	828
FbaI	TGATCA	5 cut(s)	394, 1255, 1783, 2746, 3708
FokI	GGATG	9 cut(s)	742, 906, 908, 1527, 2141, 2303, 2398, 2585, 3602
FriOI	GRGCYC	3 cut(s)	186, 475, 3442
FspBI	CTAG	9 cut(s)	770, 810, 990, 1415, 1650, 2349, 2366, 2411, 2883
GlaI	GCGC	7 cut(s)	192, 257, 1349, 2148, 2166, 3137, 3427
GsuI	CTGGAG	4 cut(s)	1029, 1461, 1867, 3389
HaeII	RGCGCY	2 cut(s)	259, 2168
HapII	CCGG	3 cut(s)	2065, 3155, 3703
HgaI	GACGC	3 cut(s)	16, 2960, 2970
HhaI	GCGC	7 cut(s)	193, 258, 1350, 2149, 2167, 3138, 3428
Hin1I	GRCGYC	1 cut(s)	8
Hin6I	GCGC	7 cut(s)	191, 256, 1348, 2147, 2165, 3136, 3426
HinP1I	GCGC	7 cut(s)	191, 256, 1348, 2147, 2165, 3136, 3426
HincII	GTYRAC	4 cut(s)	15, 824, 1428, 2670
HindII	GTYRAC	4 cut(s)	15, 824, 1428, 2670
HindIII	AAGCTT	5 cut(s)	701, 2036, 2269, 2375, 2731
HpaI	GTTAAC	2 cut(s)	15, 2670
HpaII	CCGG	3 cut(s)	2065, 3155, 3703
HphI	GGTGA	7 cut(s)	636, 715, 2249, 2563, 2957, 2958, 3718
Hpy99I	CGWCG	1 cut(s)	10
HpyAV	CCTTC	8 cut(s)	223, 728, 829, 1755, 2073, 2270, 2764, 3189
HpyCH4IV	ACGT	3 cut(s)	334, 2597, 3147
HpyF3I	CTNAG	8 cut(s)	504, 547, 780, 981, 2039, 2523, 2568, 2901
HpySE526I	ACGT	3 cut(s)	334, 2597, 3147
Hsp92I	GRCGYC	1 cut(s)	8
HspAI	GCGC	7 cut(s)	191, 256, 1348, 2147, 2165, 3136, 3426
Ksp22I	TGATCA	5 cut(s)	394, 1255, 1783, 2746, 3708
KspAI	GTTAAC	2 cut(s)	15, 2670
LguI	GCTCTTC	1 cut(s)	549
LmnI	GCTCC	7 cut(s)	127, 470, 1205, 1480, 1886, 2479, 2535
MabI	ACCWGGT	1 cut(s)	2761
MaeI	CTAG	9 cut(s)	770, 810, 990, 1415, 1650, 2349, 2366, 2411, 2883
MaeII	ACGT	3 cut(s)	334, 2597, 3147
MaeIII	GTNAC	8 cut(s)	1498, 2180, 2404, 2541, 2551, 2910, 3494, 3623
MfeI	CAATTG	3 cut(s)	1563, 2955, 3328
MflI	RGATCY	1 cut(s)	3689
MhlI	GDGCHC	7 cut(s)	186, 475, 1143, 1891, 2113, 2532, 3442
MlsI	TGGCCA	2 cut(s)	206, 3453
MluNI	TGGCCA	2 cut(s)	206, 3453
MlyI	GAGTC	4 cut(s)	893, 2188, 2813, 2830
MmeI	TCCRAC	2 cut(s)	2630, 2747
Mox20I	TGGCCA	2 cut(s)	206, 3453
Mph1103I	ATGCAT	2 cut(s)	3465, 3565
MroXI	GAANNNNTTC	6 cut(s)	702, 1123, 1191, 1299, 1708, 3643
MscI	TGGCCA	2 cut(s)	206, 3453
Msp20I	TGGCCA	2 cut(s)	206, 3453
MspA1I	CMGCKG	2 cut(s)	1223, 2889
MspCI	CTTAAG	3 cut(s)	268, 676, 1384
MspI	CCGG	3 cut(s)	2065, 3155, 3703
MspR9I	CCNGG	7 cut(s)	727, 1803, 2763, 3338, 3368, 3703, 3704
MunI	CAATTG	3 cut(s)	1563, 2955, 3328
Mva1269I	GAATGC	3 cut(s)	591, 2700, 3463
MvaI	CCWGG	5 cut(s)	727, 1803, 2763, 3338, 3368
MvnI	CGCG	1 cut(s)	1350
NciI	CCSGG	2 cut(s)	3703, 3704
NcoI	CCATGG	5 cut(s)	207, 623, 1409, 2546, 3198
NdeI	CATATG	1 cut(s)	828
NheI	GCTAGC	2 cut(s)	809, 2365
NlaIV	GGNNCC	6 cut(s)	129, 472, 1852, 2512, 3602, 3646
NmeAIII	GCCGAG	4 cut(s)	156, 637, 1111, 3601
NmuCI	GTSAC	3 cut(s)	2180, 2551, 3494
NsiI	ATGCAT	2 cut(s)	3465, 3565
OliI	CACNNNNGTG	1 cut(s)	3675
PaeI	GCATGC	4 cut(s)	852, 1524, 3136, 3556
PaeR7I	CTCGAG	1 cut(s)	251
PagI	TCATGA	1 cut(s)	2263
PciI	ACATGT	1 cut(s)	2236
PciSI	GCTCTTC	1 cut(s)	549
PctI	GAATGC	3 cut(s)	591, 2700, 3463
PdmI	GAANNNNTTC	6 cut(s)	702, 1123, 1191, 1299, 1708, 3643
PflFI	GACNNNGTC	1 cut(s)	1094
PflMI	CCANNNNNTGG	1 cut(s)	499
PleI	GAGTC	4 cut(s)	892, 2187, 2812, 2830
PpsI	GAGTC	4 cut(s)	892, 2187, 2812, 2830
Ppu21I	YACGTR	2 cut(s)	335, 2598
PscI	ACATGT	1 cut(s)	2236
Psp124BI	GAGCTC	2 cut(s)	186, 3442
Psp1406I	AACGTT	1 cut(s)	3147
Psp6I	CCWGG	5 cut(s)	725, 1801, 2761, 3336, 3366
PspGI	CCWGG	5 cut(s)	725, 1801, 2761, 3336, 3366
PspN4I	GGNNCC	6 cut(s)	129, 472, 1852, 2512, 3602, 3646
PspPI	GGNCC	6 cut(s)	1851, 2197, 2497, 2511, 2737, 3161
PspXI	VCTCGAGB	1 cut(s)	251
PsrI	GAACNNNNNNTAC	2 cut(s)	1525, 1557
PstI	CTGCAG	1 cut(s)	1111
PstNI	CAGNNNCTG	3 cut(s)	583, 1484, 1754
PsuI	RGATCY	1 cut(s)	3689
PsyI	GACNNNGTC	1 cut(s)	1094
PvuII	CAGCTG	1 cut(s)	1223
RsaI	GTAC	3 cut(s)	466, 892, 3485
RsaNI	GTAC	3 cut(s)	465, 891, 3484
SacI	GAGCTC	2 cut(s)	186, 3442
SapI	GCTCTTC	1 cut(s)	549
Sau96I	GGNCC	6 cut(s)	1851, 2197, 2497, 2511, 2737, 3161
SchI	GAGTC	4 cut(s)	893, 2188, 2813, 2830
ScrFI	CCNGG	7 cut(s)	727, 1803, 2763, 3338, 3368, 3703, 3704
SduI	GDGCHC	7 cut(s)	186, 475, 1143, 1891, 2113, 2532, 3442
SexAI	ACCWGGT	1 cut(s)	2761
SfcI	CTRYAG	1 cut(s)	1107
Sfr274I	CTCGAG	1 cut(s)	251
SinI	GGWCC	3 cut(s)	2197, 2511, 2737
SlaI	CTCGAG	1 cut(s)	251
SmaI	CCCGGG	1 cut(s)	3704
SmlI	CTYRAG	8 cut(s)	251, 268, 676, 1384, 1671, 2438, 2801, 2916
SmoI	CTYRAG	8 cut(s)	251, 268, 676, 1384, 1671, 2438, 2801, 2916
SphI	GCATGC	4 cut(s)	852, 1524, 3136, 3556
SsiI	CCGC	8 cut(s)	42, 53, 914, 1313, 2500, 2887, 3280, 3539
SspMI	CTAG	9 cut(s)	770, 810, 990, 1415, 1650, 2349, 2366, 2411, 2883
SstI	GAGCTC	2 cut(s)	186, 3442
StyD4I	CCNGG	7 cut(s)	725, 1801, 2761, 3336, 3366, 3701, 3702
StyI	CCWWGG	7 cut(s)	207, 623, 1409, 2546, 2846, 3198, 3283
TaiI	ACGT	3 cut(s)	337, 2600, 3150
TaqII	GACCGA	1 cut(s)	475
TatI	WGTACW	1 cut(s)	464
TauI	GCSGC	3 cut(s)	2502, 2889, 3282
TseFI	GTSAC	3 cut(s)	2180, 2551, 3494
Tsp45I	GTSAC	3 cut(s)	2180, 2551, 3494
TspGWI	ACGGA	5 cut(s)	51, 58, 908, 1445, 2771
TspMI	CCCGGG	1 cut(s)	3702
Tth111I	GACNNNGTC	1 cut(s)	1094
Van91I	CCANNNNNTGG	1 cut(s)	499
Vha464I	CTTAAG	3 cut(s)	268, 676, 1384
VpaK11BI	GGWCC	3 cut(s)	2197, 2511, 2737
XagI	CCTNNNNNAGG	2 cut(s)	2709, 3287
XapI	RAATTY	9 cut(s)	415, 1122, 1169, 1447, 1982, 2215, 2720, 2996, 3227
XbaI	TCTAGA	1 cut(s)	769
XhoI	CTCGAG	1 cut(s)	251
XmaI	CCCGGG	1 cut(s)	3702
XmnI	GAANNNNTTC	6 cut(s)	702, 1123, 1191, 1299, 1708, 3643
XspI	CTAG	9 cut(s)	770, 810, 990, 1415, 1650, 2349, 2366, 2411, 2883
Zsp2I	ATGCAT	2 cut(s)	3465, 3565

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.